|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
56-311 |
2.57e-29 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 120.81 E-value: 2.57e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 56 PNTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQvemvaegAFRGLGRLLLLNLASNRLSTLPqEALDGLGSL 135
Cdd:COG4886 67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLP-EELANLTNL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 136 RRLELEGNMLEELrPGTFGALGSLTTLNLAHNALVYLPAmAFQGLLRTRWLQLSHNALSVLaPEALAGLPALRRLSLHHN 215
Cdd:COG4886 139 KELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 216 ELQALPgAALSQARSLARLELGHNPLTytgeedglALPGLRELaldhgslqalgprafahcPRLHTLDLRGNQLTTLPPL 295
Cdd:COG4886 216 QLTDLP-EPLANLTNLETLDLSNNQLT--------DLPELGNL------------------TNLEELDLSNNQLTDLPPL 268
|
250
....*....|....*.
gi 1720383865 296 QVPGQLRRLRLQGNPL 311
Cdd:COG4886 269 ANLTNLKTLDLSNNQL 284
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
429-607 |
2.25e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 112.33 E-value: 2.25e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 429 LDLRRNHFPSVPrAAFPGLRHLVSLHLQHCGVAELePGALAGLDRLLYLYLSHNQLSGLSAAaLEGAPNLGYLYLEHNRF 508
Cdd:COG4886 118 LDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 509 LRIPgTALRALPTLVSLHLQDNAVDRLaPGDLAGARALRCLYLSGNHITQVSpgALGPARELEKLHLDRNRLREVPTgaL 588
Cdd:COG4886 195 TDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPP--L 268
|
170
....*....|....*....
gi 1720383865 589 EGLPALKELQLSGNPLRAL 607
Cdd:COG4886 269 ANLTNLKTLDLSNNQLTDL 287
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
407-604 |
3.50e-16 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 77.90 E-value: 3.50e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 407 HSTCDGRGLQAVP--RGFPNdTQLLDLRRNHFPSVPraAFPGLRHLVSLHLQHCGVAELEPgaLAGLDRLLYLYLSHNQL 484
Cdd:cd21340 6 HLYLNDKNITKIDnlSLCKN-LKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 485 SGLSAaaLEGAPNLGYLYLEHNRflripgtalraLPTLVSLHLQDNAVDRLAPgdlagarALRCLYLSGNHITQVSPgaL 564
Cdd:cd21340 81 SVVEG--LENLTNLEELHIENQR-----------LPPGEKLTFDPRSLAALSN-------SLRVLNISGNNIDSLEP--L 138
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1720383865 565 GPARELEKLHLDRNRLREVP--TGALEGLPALKELQLSGNPL 604
Cdd:cd21340 139 APLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
158-217 |
1.68e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.54 E-value: 1.68e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 158 SLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNEL 217
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
448-508 |
1.74e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 59.85 E-value: 1.74e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 448 RHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRF 508
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
21-311 |
7.85e-11 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 65.49 E-value: 7.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 21 QSPAWHVAAQRCpQTCVCDNSRRhVTCRHQNLTEVPNTIPELTQRLDLQGNILKVLPaaafQDLphltHLDLRNCQVEmv 100
Cdd:PRK15370 161 EAANREEAVQRM-RDCLKNNKTE-LRLKILGLTTIPACIPEQITTLILDNNELKSLP----ENL----QGNIKTLYAN-- 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 101 aegafrglgrllllnlaSNRLSTLPQEALDglgSLRRLELEGNMLEELrPGTFGAlgSLTTLNLAHNALVYLPAMAFQGL 180
Cdd:PRK15370 229 -----------------SNQLTSIPATLPD---TIQEMELSINRITEL-PERLPS--ALQSLDLFHNKISCLPENLPEEL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 181 lrtRWLQLSHNALSVLaPEALAGlpALRRLSLHHNELQALPgAALSQarSLARLELGHNPLTYTGEEdglALPGLRELAL 260
Cdd:PRK15370 286 ---RYLSVYDNSIRTL-PAHLPS--GITHLNVQSNSLTALP-ETLPP--GLKTLEAGENALTSLPAS---LPPELQVLDV 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 261 DHGSLQALgPRAFAhcPRLHTLDLRGNQLTTLPPlQVPGQLRRLRLQGNPL 311
Cdd:PRK15370 354 SKNQITVL-PETLP--PTITTLDVSRNALTNLPE-NLPAALQIMQASRNNL 400
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
415-609 |
1.72e-10 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 64.33 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 415 LQAVPRGFPNDTQLLDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPgalaglDRLLYLYLSHNQLSGLSAAALEG 494
Cdd:PRK15370 232 LTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLP------EELRYLSVYDNSIRTLPAHLPSG 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 495 apnLGYLYLEHNRFLRIPGTALRALPTLVSlhlQDNAVDRLaPGDLagARALRCLYLSGNHITqVSPGALGPAreLEKLH 574
Cdd:PRK15370 306 ---ITHLNVQSNSLTALPETLPPGLKTLEA---GENALTSL-PASL--PPELQVLDVSKNQIT-VLPETLPPT--ITTLD 373
|
170 180 190
....*....|....*....|....*....|....*.
gi 1720383865 575 LDRNRLREVPtgalEGLP-ALKELQLSGNPLRALPD 609
Cdd:PRK15370 374 VSRNALTNLP----ENLPaALQIMQASRNNLVRLPE 405
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
44-221 |
3.45e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 57.49 E-value: 3.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 44 HVTCRHQNLTEVPNTI--PELTQrLDLQGNILKVLPAaaFQDLPHLTHLDLRNcqvemvaegafrglgrllllnlasNRL 121
Cdd:cd21340 6 HLYLNDKNITKIDNLSlcKNLKV-LYLYDNKITKIEN--LEFLTNLTHLYLQN------------------------NQI 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 122 STLpqEALDGLGSLRRLELEGN------------MLEELR---------------PGTFGALG-SLTTLNLAHNALVYLp 173
Cdd:cd21340 59 EKI--ENLENLVNLKKLYLGGNrisvveglenltNLEELHienqrlppgekltfdPRSLAALSnSLRVLNISGNNIDSL- 135
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1720383865 174 aMAFQGLLRTRWLQLSHNALSVLAP--EALAGLPALRRLSLHHNELQALP 221
Cdd:cd21340 136 -EPLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
394-428 |
3.33e-04 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 38.45 E-value: 3.33e-04
10 20 30
....*....|....*....|....*....|....*
gi 1720383865 394 PCPPACACVAetRHSTCDGRGLQAVPRGFPNDTQL 428
Cdd:smart00013 1 ACPAPCNCSG--TAVDCSGRGLTEVPLDLPPDTTL 33
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
591-614 |
2.66e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 35.41 E-value: 2.66e-03
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
32-64 |
6.18e-03 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 34.60 E-value: 6.18e-03
10 20 30
....*....|....*....|....*....|...
gi 1720383865 32 CPQTCVCdnSRRHVTCRHQNLTEVPNTIPELTQ 64
Cdd:smart00013 2 CPAPCNC--SGTAVDCSGRGLTEVPLDLPPDTT 32
|
|
| LRRNT |
pfam01462 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
394-423 |
7.26e-03 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 396168 [Multi-domain] Cd Length: 28 Bit Score: 34.53 E-value: 7.26e-03
10 20 30
....*....|....*....|....*....|
gi 1720383865 394 PCPPACACVAetRHSTCDGRGLQAVPRGFP 423
Cdd:pfam01462 1 ACPVPCHCSA--TVVNCSDRGLTAVPRDLP 28
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
56-311 |
2.57e-29 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 120.81 E-value: 2.57e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 56 PNTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQvemvaegAFRGLGRLLLLNLASNRLSTLPqEALDGLGSL 135
Cdd:COG4886 67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLP-EELANLTNL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 136 RRLELEGNMLEELrPGTFGALGSLTTLNLAHNALVYLPAmAFQGLLRTRWLQLSHNALSVLaPEALAGLPALRRLSLHHN 215
Cdd:COG4886 139 KELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 216 ELQALPgAALSQARSLARLELGHNPLTytgeedglALPGLRELaldhgslqalgprafahcPRLHTLDLRGNQLTTLPPL 295
Cdd:COG4886 216 QLTDLP-EPLANLTNLETLDLSNNQLT--------DLPELGNL------------------TNLEELDLSNNQLTDLPPL 268
|
250
....*....|....*.
gi 1720383865 296 QVPGQLRRLRLQGNPL 311
Cdd:COG4886 269 ANLTNLKTLDLSNNQL 284
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
429-607 |
2.25e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 112.33 E-value: 2.25e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 429 LDLRRNHFPSVPrAAFPGLRHLVSLHLQHCGVAELePGALAGLDRLLYLYLSHNQLSGLSAAaLEGAPNLGYLYLEHNRF 508
Cdd:COG4886 118 LDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 509 LRIPgTALRALPTLVSLHLQDNAVDRLaPGDLAGARALRCLYLSGNHITQVSpgALGPARELEKLHLDRNRLREVPTgaL 588
Cdd:COG4886 195 TDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPP--L 268
|
170
....*....|....*....
gi 1720383865 589 EGLPALKELQLSGNPLRAL 607
Cdd:COG4886 269 ANLTNLKTLDLSNNQLTDL 287
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
427-630 |
5.96e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 110.79 E-value: 5.96e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 427 QLLDLRRNhfpsvprAAFPGLRHLVSLHLQHCGVAELePGALAGLDRLLYLYLSHNQLSGLSAAaLEGAPNLGYLYLEHN 506
Cdd:COG4886 99 TELDLSGN-------EELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNN 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 507 RFLRIPgTALRALPTLVSLHLQDNAVDRLaPGDLAGARALRCLYLSGNHITQVsPGALGPARELEKLHLDRNRLREVPtg 586
Cdd:COG4886 170 QLTDLP-EELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLP-- 244
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1720383865 587 ALEGLPALKELQLSGNPLRALPDGAFQPvgrSLQQLFLNSSDLE 630
Cdd:COG4886 245 ELGNLTNLEELDLSNNQLTDLPPLANLT---NLKTLDLSNNQLT 285
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
444-609 |
3.69e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 99.62 E-value: 3.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 444 FPGLRHLVSLHLQHCGvaelepgALAGLDRLLYLYLSHNQLSGLSAAaLEGAPNLGYLYLEHNRFLRIPgTALRALPTLV 523
Cdd:COG4886 92 LGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLP-EPLGNLTNLK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 524 SLHLQDNAVDRLaPGDLAGARALRCLYLSGNHITQVsPGALGPARELEKLHLDRNRLREVPTgALEGLPALKELQLSGNP 603
Cdd:COG4886 163 SLDLSNNQLTDL-PEELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQ 239
|
....*.
gi 1720383865 604 LRALPD 609
Cdd:COG4886 240 LTDLPE 245
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
43-266 |
1.41e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 97.70 E-value: 1.41e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 43 RHVTCRHQNLTEVPNTIPELT--QRLDLQGNILKVLPAAaFQDLPHLTHLDLRNcqvemvaegafrglgrllllnlasNR 120
Cdd:COG4886 139 KELDLSNNQLTDLPEPLGNLTnlKSLDLSNNQLTDLPEE-LGNLTNLKELDLSN------------------------NQ 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 121 LSTLPqEALDGLGSLRRLELEGNMLEELrPGTFGALGSLTTLNLAHNALVYLPAMAfqGLLRTRWLQLSHNALSVLAPea 200
Cdd:COG4886 194 ITDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLPELG--NLTNLEELDLSNNQLTDLPP-- 267
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720383865 201 LAGLPALRRLSLHHNELQALPGAALSQARSLARLELGHNPLTYTGEEDGLALPGLRELALDHGSLQ 266
Cdd:COG4886 268 LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGL 333
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
446-632 |
1.33e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 88.84 E-value: 1.33e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 446 GLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQlsglsaaALEGAPNLGYLYLEHNRFLRIPgTALRALPTLVSL 525
Cdd:COG4886 70 SLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLP-EELANLTNLKEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 526 HLQDNAVDRLaPGDLAGARALRCLYLSGNHITQVsPGALGPARELEKLHLDRNRLREVPTgALEGLPALKELQLSGNPLR 605
Cdd:COG4886 142 DLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDL-PEELGNLTNLKELDLSNNQITDLPE-PLGNLTNLEELDLSGNQLT 218
|
170 180
....*....|....*....|....*....
gi 1720383865 606 ALPDgafqPVGR--SLQQLFLNSSDLEQV 632
Cdd:COG4886 219 DLPE----PLANltNLETLDLSNNQLTDL 243
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
410-576 |
7.33e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 83.44 E-value: 7.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 410 CDGRGLQAVPRGFPNDTQL--LDLRRNHFPSVPrAAFPGLRHLVSLHLQHCGVAELePGALAGLDRLLYLYLSHNQLSGL 487
Cdd:COG4886 143 LSNNQLTDLPEPLGNLTNLksLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDL 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 488 SaAALEGAPNLGYLYLEHNRFLRIPgtALRALPTLVSLHLQDNAVDRLAPgdLAGARALRCLYLSGNHITQVSPGALGPA 567
Cdd:COG4886 221 P-EPLANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELL 295
|
....*....
gi 1720383865 568 RELEKLHLD 576
Cdd:COG4886 296 LGLNSLLLL 304
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
407-604 |
3.50e-16 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 77.90 E-value: 3.50e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 407 HSTCDGRGLQAVP--RGFPNdTQLLDLRRNHFPSVPraAFPGLRHLVSLHLQHCGVAELEPgaLAGLDRLLYLYLSHNQL 484
Cdd:cd21340 6 HLYLNDKNITKIDnlSLCKN-LKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 485 SGLSAaaLEGAPNLGYLYLEHNRflripgtalraLPTLVSLHLQDNAVDRLAPgdlagarALRCLYLSGNHITQVSPgaL 564
Cdd:cd21340 81 SVVEG--LENLTNLEELHIENQR-----------LPPGEKLTFDPRSLAALSN-------SLRVLNISGNNIDSLEP--L 138
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1720383865 565 GPARELEKLHLDRNRLREVP--TGALEGLPALKELQLSGNPL 604
Cdd:cd21340 139 APLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
118-530 |
9.91e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.90 E-value: 9.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 118 SNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAHNAlvylpamAFQGLLRTRWLQLSHNALSVLa 197
Cdd:COG4886 57 LRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDL- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 198 PEALAGLPALRRLSLHHNELQALPgAALSQARSLARLELGHNPLTYTGEEDGlALPGLRELALDHGSLQALgPRAFAHCP 277
Cdd:COG4886 129 PEELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTDLPEELG-NLTNLKELDLSNNQITDL-PEPLGNLT 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 278 RLHTLDLRGNQLTTLP-PLqvpGQLRRLrlqgnplwcacharpllewlvrarvrsdgacrgprrlrgealdtlrpsdlrc 356
Cdd:COG4886 206 NLEELDLSGNQLTDLPePL---ANLTNL---------------------------------------------------- 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 357 pgdaaagdgdgdededrpagprapplrsphgeaawatpcppacacvaetrhstcdgrglqavprgfpndtQLLDLRRNHF 436
Cdd:COG4886 231 ----------------------------------------------------------------------ETLDLSNNQL 240
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 437 PSVPraAFPGLRHLVSLHLQHCGVAELEPgaLAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTAL 516
Cdd:COG4886 241 TDLP--ELGNLTNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLIL 316
|
410
....*....|....
gi 1720383865 517 RALPTLVSLHLQDN 530
Cdd:COG4886 317 LLLLTTLLLLLLLL 330
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
415-636 |
1.88e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 72.66 E-value: 1.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 415 LQAVPRGFPNDTQL--LDLRRNHFPSVPrAAFPGLRHLVSLHLQHCGVAELePGALAGLDRLLYLYLSHNQLSGLSAaaL 492
Cdd:COG4886 171 LTDLPEELGNLTNLkeLDLSNNQITDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLPE--L 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 493 EGAPNLGYLYLEHNRFLRIPgtALRALPTLVSLHLQDNAVDRLAPGDLAGARALRCL--YLSGNHITQVSPGALGPAREL 570
Cdd:COG4886 247 GNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLllLLLLLNLLELLILLLLLTTLL 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720383865 571 EKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVGRSLQQLFLNSSDLEQVAHWA 636
Cdd:COG4886 325 LLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLL 390
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
158-217 |
1.68e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.54 E-value: 1.68e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 158 SLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNEL 217
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
448-508 |
1.74e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 59.85 E-value: 1.74e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 448 RHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRF 508
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
21-311 |
7.85e-11 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 65.49 E-value: 7.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 21 QSPAWHVAAQRCpQTCVCDNSRRhVTCRHQNLTEVPNTIPELTQRLDLQGNILKVLPaaafQDLphltHLDLRNCQVEmv 100
Cdd:PRK15370 161 EAANREEAVQRM-RDCLKNNKTE-LRLKILGLTTIPACIPEQITTLILDNNELKSLP----ENL----QGNIKTLYAN-- 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 101 aegafrglgrllllnlaSNRLSTLPQEALDglgSLRRLELEGNMLEELrPGTFGAlgSLTTLNLAHNALVYLPAMAFQGL 180
Cdd:PRK15370 229 -----------------SNQLTSIPATLPD---TIQEMELSINRITEL-PERLPS--ALQSLDLFHNKISCLPENLPEEL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 181 lrtRWLQLSHNALSVLaPEALAGlpALRRLSLHHNELQALPgAALSQarSLARLELGHNPLTYTGEEdglALPGLRELAL 260
Cdd:PRK15370 286 ---RYLSVYDNSIRTL-PAHLPS--GITHLNVQSNSLTALP-ETLPP--GLKTLEAGENALTSLPAS---LPPELQVLDV 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 261 DHGSLQALgPRAFAhcPRLHTLDLRGNQLTTLPPlQVPGQLRRLRLQGNPL 311
Cdd:PRK15370 354 SKNQITVL-PETLP--PTITTLDVSRNALTNLPE-NLPAALQIMQASRNNL 400
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
415-609 |
1.72e-10 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 64.33 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 415 LQAVPRGFPNDTQLLDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPgalaglDRLLYLYLSHNQLSGLSAAALEG 494
Cdd:PRK15370 232 LTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLP------EELRYLSVYDNSIRTLPAHLPSG 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 495 apnLGYLYLEHNRFLRIPGTALRALPTLVSlhlQDNAVDRLaPGDLagARALRCLYLSGNHITqVSPGALGPAreLEKLH 574
Cdd:PRK15370 306 ---ITHLNVQSNSLTALPETLPPGLKTLEA---GENALTSL-PASL--PPELQVLDVSKNQIT-VLPETLPPT--ITTLD 373
|
170 180 190
....*....|....*....|....*....|....*.
gi 1720383865 575 LDRNRLREVPtgalEGLP-ALKELQLSGNPLRALPD 609
Cdd:PRK15370 374 VSRNALTNLP----ENLPaALQIMQASRNNLVRLPE 405
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
134-193 |
1.95e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.76 E-value: 1.95e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 134 SLRRLELEGNMLEELRPGTFGALGSLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNAL 193
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
43-261 |
4.01e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 62.26 E-value: 4.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 43 RHVTCRHQNLTEVPNTIPELT--QRLDLQGNILKVLPAAaFQDLPHLTHLDLRNcqvemvaegafrglgrllllnlasNR 120
Cdd:COG4886 185 KELDLSNNQITDLPEPLGNLTnlEELDLSGNQLTDLPEP-LANLTNLETLDLSN------------------------NQ 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 121 LSTLPQeaLDGLGSLRRLELEGNMLEELRPgtFGALGSLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEA 200
Cdd:COG4886 240 LTDLPE--LGNLTNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 201 LAGLPALRRLSLHHNELQALPGAALSQARSLARLELGHNPLTYTGEEDGLALPGLRELALD 261
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLE 376
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
568-629 |
8.86e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.84 E-value: 8.86e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720383865 568 RELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVgRSLQQLFLNSSDL 629
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGL-PSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
184-241 |
1.67e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.07 E-value: 1.67e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720383865 184 RWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALSQARSLARLELGHNPL 241
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
64-145 |
2.70e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 53.30 E-value: 2.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 64 QRLDLQGNILKVLPAAAFQDLPHLTHLDLRNcqvemvaegafrglgrllllnlasNRLSTLPQEALDGLGSLRRLELEGN 143
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSN------------------------NLLTTLSPGAFSGLPSLRYLDLSGN 59
|
..
gi 1720383865 144 ML 145
Cdd:pfam13855 60 RL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
44-221 |
3.45e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 57.49 E-value: 3.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 44 HVTCRHQNLTEVPNTI--PELTQrLDLQGNILKVLPAaaFQDLPHLTHLDLRNcqvemvaegafrglgrllllnlasNRL 121
Cdd:cd21340 6 HLYLNDKNITKIDNLSlcKNLKV-LYLYDNKITKIEN--LEFLTNLTHLYLQN------------------------NQI 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 122 STLpqEALDGLGSLRRLELEGN------------MLEELR---------------PGTFGALG-SLTTLNLAHNALVYLp 173
Cdd:cd21340 59 EKI--ENLENLVNLKKLYLGGNrisvveglenltNLEELHienqrlppgekltfdPRSLAALSnSLRVLNISGNNIDSL- 135
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1720383865 174 aMAFQGLLRTRWLQLSHNALSVLAP--EALAGLPALRRLSLHHNELQALP 221
Cdd:cd21340 136 -EPLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
544-604 |
4.72e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.91 E-value: 4.72e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 544 RALRCLYLSGNHITQVSPGALGPARELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPL 604
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
118-169 |
9.84e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.76 E-value: 9.84e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1720383865 118 SNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAHNAL 169
Cdd:pfam13855 10 NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
496-556 |
1.35e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.37 E-value: 1.35e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 496 PNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHI 556
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
25-530 |
1.77e-08 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 57.94 E-value: 1.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 25 WHVAAQRCP-QTCVCDNSRRHVTC--RHQNLT-EVPNTIPEL--TQRLDLQGNILK-VLPAAAFQDLPHLTHLDLRNCQV 97
Cdd:PLN00113 51 WNSSADVCLwQGITCNNSSRVVSIdlSGKNISgKISSAIFRLpyIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNF 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 98 EMVAEGAFRGLGRLLLLnlASNRLS-TLPQEaLDGLGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAHNALV-YLPAM 175
Cdd:PLN00113 131 TGSIPRGSIPNLETLDL--SNNMLSgEIPND-IGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgQIPRE 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 176 AfqGLLRT-RWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALSQARSLARLELGHNPLT------------ 242
Cdd:PLN00113 208 L--GQMKSlKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSgpippsifslqk 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 243 ----------YTGE--EDGLALPGLRELALDHGSLQALGPRAFAHCPRLHTLDLRGNQLTTLPPLQVPGQ--LRRLRLQG 308
Cdd:PLN00113 286 lisldlsdnsLSGEipELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHnnLTVLDLST 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 309 NPLW-----CACHARPLLEWLVRARV------RSDGACRGPRRLR--GEALDTLRPSDL-RCPGDAAAGDGdgdededrp 374
Cdd:PLN00113 366 NNLTgeipeGLCSSGNLFKLILFSNSlegeipKSLGACRSLRRVRlqDNSFSGELPSEFtKLPLVYFLDIS--------- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 375 agprAPPLRSPHGEAAWATPcppACACVAETRHSTCDGrglqaVPRGFPNDT-QLLDLRRNHFPSVPRAAFPGLRHLVSL 453
Cdd:PLN00113 437 ----NNNLQGRINSRKWDMP---SLQMLSLARNKFFGG-----LPDSFGSKRlENLDLSRNQFSGAVPRKLGSLSELMQL 504
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720383865 454 HLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFL-RIPgTALRALPTLVSLHLQDN 530
Cdd:PLN00113 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSgEIP-KNLGNVESLVQVNISHN 581
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
253-311 |
2.33e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.99 E-value: 2.33e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 253 PGLRELALDHGSLQALGPRAFAHCPRLHTLDLRGNQLTTLPP--LQVPGQLRRLRLQGNPL 311
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPgaFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
156-311 |
6.18e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 53.64 E-value: 6.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 156 LGSLTTLNLAHNALVYLPAMAFQGLLRTrwLQLSHNALSVLapEALAGLPALRRLSLHHNELQALPGaaLSQARSLARLE 235
Cdd:cd21340 1 LKRITHLYLNDKNITKIDNLSLCKNLKV--LYLYDNKITKI--ENLEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLY 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 236 LGHNPLTytgEEDGLA-LPGLRELALDHGSLQ-----ALGPRA-FAHCPRLHTLDLRGNQLTTLPPLQVPGQLRRLRLQG 308
Cdd:cd21340 75 LGGNRIS---VVEGLEnLTNLEELHIENQRLPpgeklTFDPRSlAALSNSLRVLNISGNNIDSLEPLAPLRNLEQLDASN 151
|
...
gi 1720383865 309 NPL 311
Cdd:cd21340 152 NQI 154
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
411-602 |
8.24e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 54.67 E-value: 8.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 411 DGRGLQAVPRGFPNDTQL--LDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGL--------DRLLYLYLS 480
Cdd:cd00116 66 IPRGLQSLLQGLTKGCGLqeLDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLakglkdlpPALEKLVLG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 481 HNQLSGLSAAALEGapnlgylylehnrflripgtALRALPTLVSLHLQDNAVD-----RLAPGdLAGARALRCLYLSGNH 555
Cdd:cd00116 146 RNRLEGASCEALAK--------------------ALRANRDLKELNLANNGIGdagirALAEG-LKANCNLEVLDLNNNG 204
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720383865 556 ITQVSPGALGPA----RELEKLHLDRNRLREVPTGAL-----EGLPALKELQLSGN 602
Cdd:cd00116 205 LTDEGASALAETlaslKSLEVLNLGDNNLTDAGAAALasallSPNISLLTLSLSCN 260
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
429-484 |
1.60e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.29 E-value: 1.60e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720383865 429 LDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQL 484
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
64-241 |
4.77e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 53.31 E-value: 4.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 64 QRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQVEMVAEGAFRGLGRLLLLNLASNRLS-TLPQeaLDGLGSLRRLELEG 142
Cdd:PLN00113 407 RRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFgGLPD--SFGSKRLENLDLSR 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 143 NMLEELRPGTFGALGSLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPG 222
Cdd:PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564
|
170
....*....|....*....
gi 1720383865 223 AALSQARSLARLELGHNPL 241
Cdd:PLN00113 565 KNLGNVESLVQVNISHNHL 583
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
49-215 |
5.10e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.16 E-value: 5.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 49 HQNLTEVPNTIPELTQRLDLQGNILKVLPAaafqDLPH-LTHLDLRNCQVEMVAEgafRGLGRLLLLNLASNRLSTLPqE 127
Cdd:PRK15370 271 HNKISCLPENLPEELRYLSVYDNSIRTLPA----HLPSgITHLNVQSNSLTALPE---TLPPGLKTLEAGENALTSLP-A 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 128 ALDglGSLRRLELEGN---MLEELRPGTfgalgsLTTLNLAHNALVYLPAMAFQGLlrtRWLQLSHNALSVLaPEALAGL 204
Cdd:PRK15370 343 SLP--PELQVLDVSKNqitVLPETLPPT------ITTLDVSRNALTNLPENLPAAL---QIMQASRNNLVRL-PESLPHF 410
|
170
....*....|....*
gi 1720383865 205 ----PALRRLSLHHN 215
Cdd:PRK15370 411 rgegPQPTRIIVEYN 425
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
520-580 |
5.41e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.13 E-value: 5.41e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 520 PTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHITQVSPGALGPARELEKLHLDRNRL 580
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
467-620 |
1.54e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 50.94 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 467 ALAGLDRLLYLYLSHNQLS--GLSAAA--LEGAPNLGYLYLEHNRF----LRIPGTALRALPTLVSLHLQDN-----AVD 533
Cdd:COG5238 231 ALKGNKSLTTLDLSNNQIGdeGVIALAeaLKNNTTVETLYLSGNQIgaegAIALAKALQGNTTLTSLDLSVNrigdeGAI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 534 RLAPGdLAGARALRCLYLSGNHITQVSPGALGPARE----LEKLHLDRNRLR----EVPTGALEGLPALKELQLSGNplr 605
Cdd:COG5238 311 ALAEG-LQGNKTLHTLNLAYNGIGAQGAIALAKALQenttLHSLDLSDNQIGdegaIALAKYLEGNTTLRELNLGKN--- 386
|
170
....*....|....*
gi 1720383865 606 ALPDGAFQPVGRSLQ 620
Cdd:COG5238 387 NIGKQGAEALIDALQ 401
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
127-311 |
1.75e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.40 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 127 EALDGLGSLRRLELEGNMLEELRPgtFGALGSLTTLNLAHNALVYLPAmaFQGLLRTRWLQLSHNALSVLapEALAGLPA 206
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVV--EGLENLTN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 207 LRRLSLHHNELQA------LPGAALSQARSLARLELGHNPLTytgeedglalpglrelaldhgSLQALgprafAHCPRLH 280
Cdd:cd21340 92 LEELHIENQRLPPgekltfDPRSLAALSNSLRVLNISGNNID---------------------SLEPL-----APLRNLE 145
|
170 180 190
....*....|....*....|....*....|....*
gi 1720383865 281 TLDLRGNQLTTLPPLQVP----GQLRRLRLQGNPL 311
Cdd:cd21340 146 QLDASNNQISDLEELLDLlsswPSLRELDLTGNPV 180
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
205-289 |
2.20e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.21 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 205 PALRRLSLHHNELQALPGAALSQARSLARLELGHNpltytgeedglalpglrelaldhgSLQALGPRAFAHCPRLHTLDL 284
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNN------------------------LLTTLSPGAFSGLPSLRYLDL 56
|
....*
gi 1720383865 285 RGNQL 289
Cdd:pfam13855 57 SGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
132-508 |
2.46e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 51.00 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 132 LGSLRRLE---LEGNMLEELRPGTFGALGSLTTLNLAHNALV-YLPAMAFQgLLRTRWLQLSHNALSVLAPEALAGLPAL 207
Cdd:PLN00113 256 LGNLKNLQylfLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSgEIPELVIQ-LQNLEILHLFSNNFTGKIPVALTSLPRL 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 208 RRLSLHHNELQALPGAALSQARSLARLELGHNPLTytGE-EDGLALPG-LRELALDHGSLQALGPRAFAHCPRLHTLDLR 285
Cdd:PLN00113 335 QVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT--GEiPEGLCSSGnLFKLILFSNSLEGEIPKSLGACRSLRRVRLQ 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 286 GNQLT-TLP------PLQVPGQLRRLRLQGN---PLWcachARPLLEWLVRARVRSDGACrgPRRLRGEALDTLrpsDLr 355
Cdd:PLN00113 413 DNSFSgELPseftklPLVYFLDISNNNLQGRinsRKW----DMPSLQMLSLARNKFFGGL--PDSFGSKRLENL---DL- 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 356 cpgdaaagdgdgdededrpagprapplrsphgeaawatpcppacacvAETRHStcdgrglQAVPRGFPNDTQLLDLR--R 433
Cdd:PLN00113 483 -----------------------------------------------SRNQFS-------GAVPRKLGSLSELMQLKlsE 508
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720383865 434 NHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRF 508
Cdd:PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
473-530 |
2.98e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 2.98e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720383865 473 RLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQDN 530
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
429-604 |
6.14e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.46 E-value: 6.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 429 LDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRF 508
Cdd:PLN00113 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNF 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 509 L-RIPGtALRALPTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHITQVSPGALGPARELEKLHLDRNRLR-EVPTg 586
Cdd:PLN00113 321 TgKIPV-ALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEgEIPK- 398
|
170
....*....|....*...
gi 1720383865 587 ALEGLPALKELQLSGNPL 604
Cdd:PLN00113 399 SLGACRSLRRVRLQDNSF 416
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
64-291 |
1.29e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 47.74 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 64 QRLDLQGNILKVLPAAAFQDL---PHLTHLDLRNCQVE-----MVAEGAfrglgrllllnlasnrlsTLPQEALDGLGSL 135
Cdd:cd00116 84 QELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGLGdrglrLLAKGL------------------KDLPPALEKLVLG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 136 RRLeLEGNMLEELrPGTFGALGSLTTLNLAHNalvylpamafqgllrtrwlQLSHNALSVLApEALAGLPALRRLSLHHN 215
Cdd:cd00116 146 RNR-LEGASCEAL-AKALRANRDLKELNLANN-------------------GIGDAGIRALA-EGLKANCNLEVLDLNNN 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 216 EL-----QALpGAALSQARSLARLELGHNPLTYTG-----EEDGLALPGLRELALDHGSLQALGPRAFAHC----PRLHT 281
Cdd:cd00116 204 GLtdegaSAL-AETLASLKSLEVLNLGDNNLTDAGaaalaSALLSPNISLLTLSLSCNDITDDGAKDLAEVlaekESLLE 282
|
250
....*....|
gi 1720383865 282 LDLRGNQLTT 291
Cdd:cd00116 283 LDLRGNKFGE 292
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
127-318 |
1.74e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 47.86 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 127 EALDGLGSLRRLELEGN---------MLEELRPGTfgalgSLTTLNLAHNalvylpamafqgllrtrwlQLSHNALSVLA 197
Cdd:COG5238 230 EALKGNKSLTTLDLSNNqigdegviaLAEALKNNT-----TVETLYLSGN-------------------QIGAEGAIALA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 198 pEALAGLPALRRLSLHHNELQAlPGA-----ALSQARSLARLELGHNPLTYTGEEdGLA-----LPGLRELALDHGSLQA 267
Cdd:COG5238 286 -KALQGNTTLTSLDLSVNRIGD-EGAialaeGLQGNKTLHTLNLAYNGIGAQGAI-ALAkalqeNTTLHSLDLSDNQIGD 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 268 LGPRAFAH----CPRLHTLDLRGNQLT-----TLPPLQVPGQLRRLRLQGNPLWCACHAR 318
Cdd:COG5238 363 EGAIALAKylegNTTLRELNLGKNNIGkqgaeALIDALQTNRLHTLILDGNLIGAEAQQR 422
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
467-595 |
1.85e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 47.48 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 467 ALAGLDRLLYLYLSHNQLSGLSAAA----LEGAPNLGYLYLEHN-------RFLripGTALRALPTLVSLHLQDNAVdrl 535
Cdd:COG5238 287 ALQGNTTLTSLDLSVNRIGDEGAIAlaegLQGNKTLHTLNLAYNgigaqgaIAL---AKALQENTTLHSLDLSDNQI--- 360
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720383865 536 apGD---------LAGARALRCLYLSGNHITQVSPGALGPARELEKLH---LDRNRLREVPTGAL-EGLPALK 595
Cdd:COG5238 361 --GDegaialakyLEGNTTLRELNLGKNNIGKQGAEALIDALQTNRLHtliLDGNLIGAEAQQRLeQLLERIK 431
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
170-639 |
2.12e-05 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 47.94 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 170 VYLPAMAFQgllRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALSQARSLARLELGHNPLTYTGEEDG 249
Cdd:COG3321 861 VPLPTYPFQ---REDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAA 937
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 250 LALPGLRELALDHGSLQALGPRAFAHCPRLHTLDLRGNQLTTLPPLQVPGQLRRLRLQGNPLWCACHARPLLEWLVRARV 329
Cdd:COG3321 938 AAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAA 1017
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 330 RSDGACRGPRRLRGEALDTLRPSDLRcpgdaaagdgdgDEDEDRPAGPRAPPLRSPHGEAAWATPCPPACACVAETRHST 409
Cdd:COG3321 1018 AAALLALAALLAAAAAALAAAAAAAA------------AAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALA 1085
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 410 CDGRGLQAVPRGFPNDTQLLDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSA 489
Cdd:COG3321 1086 LAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAA 1165
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 490 AALEGAPNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHITQVSPGALGPARE 569
Cdd:COG3321 1166 ALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAV 1245
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 570 LEKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVGRSLQQLFLNSSDLEQVAHWAEPA 639
Cdd:COG3321 1246 AALAAAAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAA 1315
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
465-604 |
2.91e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 47.54 E-value: 2.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 465 PGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFL-RIPgTALRALPTLVSLHLQDNAVDRLAPGDLAGA 543
Cdd:PLN00113 205 PRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTgPIP-SSLGNLKNLQYLFLYQNKLSGPIPPSIFSL 283
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 544 RALRCLYLSGNHITQVSPGALGPARELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPL 604
Cdd:PLN00113 284 QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKF 344
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
76-547 |
7.79e-05 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 46.02 E-value: 7.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 76 LPAAAFQdLPHLTHLDLRNCQVEMVAEGAFRGLGRLLLLNLASNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGA 155
Cdd:COG3321 863 LPTYPFQ-REDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAA 941
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 156 LGSLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALSQARSLARLE 235
Cdd:COG3321 942 LLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAAL 1021
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 236 LGHNPLTYTGEEDGLALPGLRELALDHGSLQALGPRAFAHCPRLHTLDLRGNQLTTLPPLQVPGQLRRLRLQGNPLWCAC 315
Cdd:COG3321 1022 LALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAA 1101
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 316 HARPLLEWLVRARVRSDGACRGPRRLRGEALDTLRPSDLRCPGDAAAGDGDGDEDEDRPAGPRAPPLRSPHGEAAWATPC 395
Cdd:COG3321 1102 LAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALAL 1181
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 396 PPACACVAETRHSTcDGRGLQAVPRGFPNDTQLLDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLL 475
Cdd:COG3321 1182 AAALAAALAGLAAL-LLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAALA 1260
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720383865 476 YLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQDNAVDRLAPGDLAGARALR 547
Cdd:COG3321 1261 ALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAA 1332
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
119-311 |
1.05e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 45.54 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 119 NRLSTLPQEALDglgsLRRLELEGNMLEELR---PGtfgalgsLTTLNLAHNALVYLPAMAfQGLLRTRWLQLSHNALSV 195
Cdd:PRK15387 232 NNLTSLPALPPE----LRTLEVSGNQLTSLPvlpPG-------LLELSIFSNPLTHLPALP-SGLCKLWIFGNQLTSLPV 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 196 LAPealaglpALRRLSLHHNELQALPgaalSQARSLARLELGHNPLTytgeedglALP----GLRELALDHGSLQALGP- 270
Cdd:PRK15387 300 LPP-------GLQELSVSDNQLASLP----ALPSELCKLWAYNNQLT--------SLPtlpsGLQELSVSDNQLASLPTl 360
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720383865 271 -----RAFAHCPRLHTLD----------LRGNQLTTLPPLqvPGQLRRLRLQGNPL 311
Cdd:PRK15387 361 pselyKLWAYNNRLTSLPalpsglkeliVSGNRLTSLPVL--PSELKELMVSGNRL 414
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
129-257 |
2.62e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.04 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 129 LDGLGslrrLELEGnmLEELRPGTFGALGSLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALR 208
Cdd:PLN03150 420 IDGLG----LDNQG--LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR 493
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1720383865 209 RLSLHHNELQA-LPGAALSQARSLARLELGHNPltytgeedGL-ALPGLRE 257
Cdd:PLN03150 494 ILNLNGNSLSGrVPAALGGRLLHRASFNFTDNA--------GLcGIPGLRA 536
|
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
394-428 |
3.33e-04 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 38.45 E-value: 3.33e-04
10 20 30
....*....|....*....|....*....|....*
gi 1720383865 394 PCPPACACVAetRHSTCDGRGLQAVPRGFPNDTQL 428
Cdd:smart00013 1 ACPAPCNCSG--TAVDCSGRGLTEVPLDLPPDTTL 33
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
479-604 |
5.81e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 43.30 E-value: 5.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 479 LSHNQLSG-LSAAALEGAPNLGYLYLEHNRFL-RIPGTALralPTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHI 556
Cdd:PLN00113 100 LSNNQLSGpIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSI---PNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1720383865 557 TQVSPGALGPARELEKLHLDRNRLR-EVPTgALEGLPALKELQLSGNPL 604
Cdd:PLN00113 177 VGKIPNSLTNLTSLEFLTLASNQLVgQIPR-ELGQMKSLKWIYLGYNNL 224
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
449-606 |
5.89e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 42.85 E-value: 5.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 449 HLVSLHLQHCGVAELEPGALAGLD-RLLYLYLSHNQLS--GLS--AAALEGAPNLGYLYLEHNRF----LRIPGTALRAL 519
Cdd:COG5238 156 VHLLGLAARLGLLAAISMAKALQNnSVETVYLGCNQIGdeGIEelAEALTQNTTVTTLWLKRNPIgdegAEILAEALKGN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 520 PTLVSLHLQDNAVDrlAPGDLAGARALRC------LYLSGNHITqvSPGALGPARELEK------LHLDRNRLREvpTGA 587
Cdd:COG5238 236 KSLTTLDLSNNQIG--DEGVIALAEALKNnttvetLYLSGNQIG--AEGAIALAKALQGnttltsLDLSVNRIGD--EGA 309
|
170 180
....*....|....*....|....*
gi 1720383865 588 ------LEGLPALKELQLSGNPLRA 606
Cdd:COG5238 310 ialaegLQGNKTLHTLNLAYNGIGA 334
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
591-614 |
2.66e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 35.41 E-value: 2.66e-03
|
| LRR_TYP |
smart00369 |
Leucine-rich repeats, typical (most populated) subfamily; |
591-614 |
2.66e-03 |
|
Leucine-rich repeats, typical (most populated) subfamily;
Pssm-ID: 197687 [Multi-domain] Cd Length: 24 Bit Score: 35.41 E-value: 2.66e-03
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
447-609 |
3.26e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.60 E-value: 3.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 447 LRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFL-RIPGTaLRALPTLVSL 525
Cdd:PLN00113 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTgEIPEG-LCSSGNLFKL 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 526 HLQDNAVDRLAPGDLAGARALRCLYLSGNHITqvspGALgpARELEKLHL-------DRNRLREVPTGALEgLPALKELQ 598
Cdd:PLN00113 386 ILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS----GEL--PSEFTKLPLvyfldisNNNLQGRINSRKWD-MPSLQMLS 458
|
170
....*....|..
gi 1720383865 599 LSGNPLRA-LPD 609
Cdd:PLN00113 459 LARNKFFGgLPD 470
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
570-604 |
4.02e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 35.68 E-value: 4.02e-03
10 20 30
....*....|....*....|....*....|....*
gi 1720383865 570 LEKLHLDRNRLREVPtgALEGLPALKELQLSGNPL 604
Cdd:pfam12799 3 LEVLDLSNNQITDIP--PLAKLPNLETLDLSGNNK 35
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
277-311 |
4.15e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 35.68 E-value: 4.15e-03
10 20 30
....*....|....*....|....*....|....*
gi 1720383865 277 PRLHTLDLRGNQLTTLPPLQVPGQLRRLRLQGNPL 311
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPPLAKLPNLETLDLSGNNK 35
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
447-637 |
4.55e-03 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 40.24 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 447 LRHLVSLHLQHCGVAELEPGA--LAGLDRLlylylshnQLSGLS--AAALEGAPNLGYLYLEHNRFLRIPgTALRaLPTL 522
Cdd:PLN03210 680 LNKLEDLDMSRCENLEILPTGinLKSLYRL--------NLSGCSrlKSFPDISTNISWLDLDETAIEEFP-SNLR-LENL 749
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 523 VSLHLQD-------NAVDRLAPGDLAGARALRCLYLSGNHITQVSPGALGPARELEKLHLDRNR-LREVPTGAleGLPAL 594
Cdd:PLN03210 750 DELILCEmkseklwERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCInLETLPTGI--NLESL 827
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1720383865 595 KELQLSG-NPLRALPDgafqpVGRSLQQLFLNSSDLEQVAHWAE 637
Cdd:PLN03210 828 ESLDLSGcSRLRTFPD-----ISTNISDLNLSRTGIEEVPWWIE 866
|
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
32-64 |
6.18e-03 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 34.60 E-value: 6.18e-03
10 20 30
....*....|....*....|....*....|...
gi 1720383865 32 CPQTCVCdnSRRHVTCRHQNLTEVPNTIPELTQ 64
Cdd:smart00013 2 CPAPCNC--SGTAVDCSGRGLTEVPLDLPPDTT 32
|
|
| LRRNT |
pfam01462 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
394-423 |
7.26e-03 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 396168 [Multi-domain] Cd Length: 28 Bit Score: 34.53 E-value: 7.26e-03
10 20 30
....*....|....*....|....*....|
gi 1720383865 394 PCPPACACVAetRHSTCDGRGLQAVPRGFP 423
Cdd:pfam01462 1 ACPVPCHCSA--TVVNCSDRGLTAVPRDLP 28
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
474-604 |
7.32e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 39.45 E-value: 7.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720383865 474 LLYLYLSHNQLSGLSAAAleGAPNLGYLYLEHNRFL-RIPgTALRALPTLVSLHLQDNAVDRLAPGDLAGARALRCLYLS 552
Cdd:PLN00113 120 LRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSgEIP-NDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLA 196
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1720383865 553 GNHITQVSPGALGPARELEKLHLDRNRLR-EVPTgALEGLPALKELQLSGNPL 604
Cdd:PLN00113 197 SNQLVGQIPRELGQMKSLKWIYLGYNNLSgEIPY-EIGGLTSLNHLDLVYNNL 248
|
|
| |
