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protein FAM184A isoform X21 [Mus musculus]
Protein Classification
coiled-coil domain-containing protein ( domain architecture ID 1000037 )
coiled-coil domain-containing protein contains a region with alpha-helical coiled-coil sequence signatures that is being annotated by a variety of protein family models, not necessarily indicating family membership
List of domain hits
Name
Accession
Description
Interval
E-value
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
96-622
1.68e-10
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 64.19
E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 96 EEL ARKHHMAIEAVHSNASRDKIK L QT ELEE Q y KK E KLS LE EDKNQ L QL ELE S L KQ --- A L GDK L TS A NQ E IGR L QDLVR 172
Cdd:COG1196 220 EEL KELEAELLLLKLRELEAELEE L EA ELEE L - EA E LEE LE AELAE L EA ELE E L RL ele E L ELE L EE A QA E EYE L LAELA 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 173 KS EQ GLGSA E GLISS L QDSQ E R L QS EL DLTKGR L K E TKDA L LNV E A EL QQERH E H E QTL A TMK E E E K -- L RVDRMAHDL E 250
Cdd:COG1196 299 RL EQ DIARL E ERRRE L EERL E E L EE EL AELEEE L E E LEEE L EEL E E EL EEAEE E L E EAE A ELA E A E E al L EAEAELAEA E 378
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 251 IKWT E NLRQECSK LR QELR L -------- QH EE DKKSAMSQ L LQLK E REKN A ARDSWQKKV E DLLNQISLLKQNL EL QLCQ 322
Cdd:COG1196 379 EELE E LAEELLEA LR AAAE L aaqleele EA EE ALLERLER L EEEL E ELEE A LAELEEEEE E EEEALEEAAEEEA EL EEEE 458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 323 SQTSLQQLQAQF - TQERQRLTQ EL E E LEEQHQQ R HKS L K EA HVLAFQTM E EE K EKEQR A LETH L QQKHSAELQSLK ---- 397
Cdd:COG1196 459 EALLELLAELLE e AALLEAALA EL L E ELAEAAA R LLL L L EA EADYEGFL E GV K AALLL A GLRG L AGAVAVLIGVEA ayea 538
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 398 --- D A HRESMEGFR VE MEQELQTLRFE L EDEGKAMLAS L RSELNHQH AA SIDL L RHSHHQELAAAKMELE R SI D ISRRQS 474
Cdd:COG1196 539 ale A A LAAALQNIV VE DDEVAAAAIEY L KAAKAGRATF L PLDKIRAR AA LAAA L ARGAIGAAVDLVASDL R EA D ARYYVL 618
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 475 KEHMCRISDLQEE L RHREHHITD L D --- K EV QHLH E NINTLTKELELKGK E I L RVRS E SNQQMRLHEQD L NKRLEKELDV 551
Cdd:COG1196 619 GDTLLGRTLVAAR L EAALRRAVT L A grl R EV TLEG E GGSAGGSLTGGSRR E L L AALL E AEAELEELAER L AEEELELEEA 698
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720362589 552 MT A DHLR E KNIMR A DFNKTN E L L K E INAAL Q VSL E DM E EKYLMR E SRPEDIQMIA E LKSLITERDQVIKK L 622
Cdd:COG1196 699 LL A EEEE E RELAE A EEERLE E E L E E EALEE Q LEA E RE E LLEELL E EEELLEEEAL E ELPEPPDLEELERE L 769
Name
Accession
Description
Interval
E-value
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
96-622
1.68e-10
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 64.19
E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 96 EEL ARKHHMAIEAVHSNASRDKIK L QT ELEE Q y KK E KLS LE EDKNQ L QL ELE S L KQ --- A L GDK L TS A NQ E IGR L QDLVR 172
Cdd:COG1196 220 EEL KELEAELLLLKLRELEAELEE L EA ELEE L - EA E LEE LE AELAE L EA ELE E L RL ele E L ELE L EE A QA E EYE L LAELA 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 173 KS EQ GLGSA E GLISS L QDSQ E R L QS EL DLTKGR L K E TKDA L LNV E A EL QQERH E H E QTL A TMK E E E K -- L RVDRMAHDL E 250
Cdd:COG1196 299 RL EQ DIARL E ERRRE L EERL E E L EE EL AELEEE L E E LEEE L EEL E E EL EEAEE E L E EAE A ELA E A E E al L EAEAELAEA E 378
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 251 IKWT E NLRQECSK LR QELR L -------- QH EE DKKSAMSQ L LQLK E REKN A ARDSWQKKV E DLLNQISLLKQNL EL QLCQ 322
Cdd:COG1196 379 EELE E LAEELLEA LR AAAE L aaqleele EA EE ALLERLER L EEEL E ELEE A LAELEEEEE E EEEALEEAAEEEA EL EEEE 458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 323 SQTSLQQLQAQF - TQERQRLTQ EL E E LEEQHQQ R HKS L K EA HVLAFQTM E EE K EKEQR A LETH L QQKHSAELQSLK ---- 397
Cdd:COG1196 459 EALLELLAELLE e AALLEAALA EL L E ELAEAAA R LLL L L EA EADYEGFL E GV K AALLL A GLRG L AGAVAVLIGVEA ayea 538
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 398 --- D A HRESMEGFR VE MEQELQTLRFE L EDEGKAMLAS L RSELNHQH AA SIDL L RHSHHQELAAAKMELE R SI D ISRRQS 474
Cdd:COG1196 539 ale A A LAAALQNIV VE DDEVAAAAIEY L KAAKAGRATF L PLDKIRAR AA LAAA L ARGAIGAAVDLVASDL R EA D ARYYVL 618
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 475 KEHMCRISDLQEE L RHREHHITD L D --- K EV QHLH E NINTLTKELELKGK E I L RVRS E SNQQMRLHEQD L NKRLEKELDV 551
Cdd:COG1196 619 GDTLLGRTLVAAR L EAALRRAVT L A grl R EV TLEG E GGSAGGSLTGGSRR E L L AALL E AEAELEELAER L AEEELELEEA 698
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720362589 552 MT A DHLR E KNIMR A DFNKTN E L L K E INAAL Q VSL E DM E EKYLMR E SRPEDIQMIA E LKSLITERDQVIKK L 622
Cdd:COG1196 699 LL A EEEE E RELAE A EEERLE E E L E E EALEE Q LEA E RE E LLEELL E EEELLEEEAL E ELPEPPDLEELERE L 769
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
127-515
1.26e-06
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 51.98
E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 127 QYKK E KLS LEE DKNQ L QLELES L KQ AL GD --- K L TSANQ E IGR L QDLVRKSEQGLGSAEGLISS L QDSQ E R L QSELDLTK 203
Cdd:TIGR02168 674 ERRR E IEE LEE KIEE L EEKIAE L EK AL AE lrk E L EELEE E LEQ L RKELEELSRQISALRKDLAR L EAEV E Q L EERIAQLS 753
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 204 GR L K E TKDALLNV E AE L QQERH E HEQTL A TMK E E E K l RVDRMAHD L eikwt EN LR QECSK LR Q EL R L QH EE dkksamsq L 283
Cdd:TIGR02168 754 KE L T E LEAEIEEL E ER L EEAEE E LAEAE A EIE E L E A - QIEQLKEE L ----- KA LR EALDE LR A EL T L LN EE -------- A 819
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 284 LQ L K ER EKNAA R D -- SWQKKV EDL LN QI SL L KQNL E l Q L CQSQTS L QQ L QAQFTQ E RQR L TQ E LEE LEE QHQQRHKS L K E 361
Cdd:TIGR02168 820 AN L R ER LESLE R R ia ATERRL EDL EE QI EE L SEDI E - S L AAEIEE L EE L IEELES E LEA L LN E RAS LEE ALALLRSE L E E 898
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 362 A hvlaf QTMEE E K E KEQRA L ETH L Q qkhsa EL QSLKDAHRESM EG FR V EMEQELQT L RF E LEDEGKAML A slrselnhq H 441
Cdd:TIGR02168 899 L ----- SEELR E L E SKRSE L RRE L E ----- EL REKLAQLELRL EG LE V RIDNLQER L SE E YSLTLEEAE A --------- L 959
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720362589 442 AAS I DLLRHSHHQE L AAAKMELERSIDISRRQSK E hmcr ISD L Q E ELRHREHHIT DL DKEVQH L H E N I NTLTK E 515
Cdd:TIGR02168 960 ENK I EDDEEEARRR L KRLENKIKELGPVNLAAIE E ---- YEE L K E RYDFLTAQKE DL TEAKET L E E A I EEIDR E 1029
PTZ00121
PTZ00121 MAEBL; Provisional
48-548
7.65e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.82
E-value: 7.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 48 S KK I A QLT KK VN E AKRTQQ E YYEM E LKNLQNRL E GEVAQLNE A HG K TL E ELARKHHMAIE A VHSNASRDKI K LQT E LEEQ 127
Cdd:PTZ00121 1327 A KK K A DAA KK KA E EAKKAA E AAKA E AEAAADEA E AAEEKAEA A EK K KE E AKKKADAAKKK A EEKKKADEAK K KAE E DKKK 1406
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 128 YKKE K LSLEED K NQLQLELESLKQALG D KLTSANQ E IGRLQDLVR K S E QG l GS AE GLISSLQDSQER lqsel D LT K GRLK 207
Cdd:PTZ00121 1407 ADEL K KAAAAK K KADEAKKKAEEKKKA D EAKKKAE E AKKADEAKK K A E EA - KK AE EAKKKAEEAKKA ----- D EA K KKAE 1480
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 208 E T K D A lln V EA ELQQ E RHEHEQTL A TMKE E E K LRV D RMAHDL E I K WTENLRQ - E CS K LRQ E LRLQH E ED K KSAMSQLLQ L 286
Cdd:PTZ00121 1481 E A K K A --- D EA KKKA E EAKKKADE A KKAA E A K KKA D EAKKAE E A K KADEAKK a E EA K KAD E AKKAE E KK K ADELKKAEE L 1557
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 287 K ER E K na ARDSWQK K VEDLLNQIS L L K QNLELQL cqsqtslqqlqaqftq E RQ R LTQELEEL EE QHQQRHKSL K E A HVLA 366
Cdd:PTZ00121 1558 K KA E E -- KKKAEEA K KAEEDKNMA L R K AEEAKKA ---------------- E EA R IEEVMKLY EE EKKMKAEEA K K A EEAK 1619
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 367 FQTM E EE K EK E QRALETH L QQ K HSA E LQSLKDAHRES m E GFRVEMEQ E LQT lrfel ED E G K AMLASLRSELNHQHA A SID 446
Cdd:PTZ00121 1620 IKAE E LK K AE E EKKKVEQ L KK K EAE E KKKAEELKKAE - E ENKIKAAE E AKK ----- AE E D K KKAEEAKKAEEDEKK A AEA 1693
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 447 L LRHSHH ---- Q EL AAAKM E LERSIDISRRQSK E HMCRISDLQE E LRHREHHITDLD K E v QHLHEN I NT L T KE L E L K GK E 522
Cdd:PTZ00121 1694 L KKEAEE akka E EL KKKEA E EKKKAEELKKAEE E NKIKAEEAKK E AEEDKKKAEEAK K D - EEEKKK I AH L K KE E E K K AE E 1772
490 500
....*....|....*....|....*.
gi 1720362589 523 I l R VRS E SNQQMR L H E Q D LNK R L E KE 548
Cdd:PTZ00121 1773 I - R KEK E AVIEEE L D E E D EKR R M E VD 1797
CCDC158
pfam15921 Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...
58-542
3.41e-03
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain]
Cd Length: 1112
Bit Score: 40.49
E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 58 VN E AK R T Q QEY Y EME L KN L QN --- R L EG E VAQLNEAHGKTL EEL ARKHHM A - I E AVHSNAS RD KI --------- K LQ TE L 124
Cdd:pfam15921 304 IQ E QA R N Q NSM Y MRQ L SD L ES tvs Q L RS E LREAKRMYEDKI EEL EKQLVL A n S E LTEARTE RD QF sqesgnldd Q LQ KL L 383
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 125 EEQY K K EK - LSLE EDK N QL -------- QLELES L KQA L G D K ltsa N Q E IG RL QD L VRK - SEQGL G SA E GLISSL Q DSQ E R 194
Cdd:pfam15921 384 ADLH K R EK e LSLE KEQ N KR lwdrdtgn SITIDH L RRE L D D R ---- N M E VQ RL EA L LKA m KSECQ G QM E RQMAAI Q GKN E S 459
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 195 L QSELD LT k GR L KE TK DA L LN V EA EL QQERHEH E QTLA T MKE ----- E EK L R V drmahdleikw T E NLRQ E CS KLR Q -- E 267
Cdd:pfam15921 460 L EKVSS LT - AQ L ES TK EM L RK V VE EL TAKKMTL E SSER T VSD ltasl Q EK E R A ----------- I E ATNA E IT KLR S rv D 527
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 268 L R LQ HEEDK K SAMSQ L lqlke R EKNAARDSWQKKVEDLLNQ I SL L K Q NL E lqlcqsqt SLQ QL QA Q FTQERQRLTQ E LEE 347
Cdd:pfam15921 528 L K LQ ELQHL K NEGDH L ----- R NVQTECEALKLQMAEKDKV I EI L R Q QI E -------- NMT QL VG Q HGRTAGAMQV E KAQ 594
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 348 LE EQHQQ R HKS L K E AHV L AFQTMEEEK E K E Q R ALETH L QQ ----- KH S AE L QSL KD AHR E smegf R VEMEQ E LQ T L R F EL 422
Cdd:pfam15921 595 LE KEIND R RLE L Q E FKI L KDKKDAKIR E L E A R VSDLE L EK vklvn AG S ER L RAV KD IKQ E ----- R DQLLN E VK T S R N EL 669
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 423 EDEGKAMLASL R SEL N H qh AASIDLLRHSHHQE L AA A KM ELE RSIDISR ----------------- R Q SKEHMCR I SD LQ 485
Cdd:pfam15921 670 NSLSEDYEVLK R NFR N K -- SEEMETTTNKLKMQ L KS A QS ELE QTRNTLK smegsdghamkvamgmq K Q ITAKRGQ I DA LQ 747
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720362589 486 EELRHR E HHI T DLD KE VQH L H E NI N T L TK EL ELKGK E ILRVRS E ---- SN Q QM RL H E QDL N 542
Cdd:pfam15921 748 SKIQFL E EAM T NAN KE KHF L K E EK N K L SQ EL STVAT E KNKMAG E levl RS Q ER RL K E KVA N 808
Name
Accession
Description
Interval
E-value
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
96-622
1.68e-10
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 64.19
E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 96 EEL ARKHHMAIEAVHSNASRDKIK L QT ELEE Q y KK E KLS LE EDKNQ L QL ELE S L KQ --- A L GDK L TS A NQ E IGR L QDLVR 172
Cdd:COG1196 220 EEL KELEAELLLLKLRELEAELEE L EA ELEE L - EA E LEE LE AELAE L EA ELE E L RL ele E L ELE L EE A QA E EYE L LAELA 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 173 KS EQ GLGSA E GLISS L QDSQ E R L QS EL DLTKGR L K E TKDA L LNV E A EL QQERH E H E QTL A TMK E E E K -- L RVDRMAHDL E 250
Cdd:COG1196 299 RL EQ DIARL E ERRRE L EERL E E L EE EL AELEEE L E E LEEE L EEL E E EL EEAEE E L E EAE A ELA E A E E al L EAEAELAEA E 378
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 251 IKWT E NLRQECSK LR QELR L -------- QH EE DKKSAMSQ L LQLK E REKN A ARDSWQKKV E DLLNQISLLKQNL EL QLCQ 322
Cdd:COG1196 379 EELE E LAEELLEA LR AAAE L aaqleele EA EE ALLERLER L EEEL E ELEE A LAELEEEEE E EEEALEEAAEEEA EL EEEE 458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 323 SQTSLQQLQAQF - TQERQRLTQ EL E E LEEQHQQ R HKS L K EA HVLAFQTM E EE K EKEQR A LETH L QQKHSAELQSLK ---- 397
Cdd:COG1196 459 EALLELLAELLE e AALLEAALA EL L E ELAEAAA R LLL L L EA EADYEGFL E GV K AALLL A GLRG L AGAVAVLIGVEA ayea 538
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 398 --- D A HRESMEGFR VE MEQELQTLRFE L EDEGKAMLAS L RSELNHQH AA SIDL L RHSHHQELAAAKMELE R SI D ISRRQS 474
Cdd:COG1196 539 ale A A LAAALQNIV VE DDEVAAAAIEY L KAAKAGRATF L PLDKIRAR AA LAAA L ARGAIGAAVDLVASDL R EA D ARYYVL 618
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 475 KEHMCRISDLQEE L RHREHHITD L D --- K EV QHLH E NINTLTKELELKGK E I L RVRS E SNQQMRLHEQD L NKRLEKELDV 551
Cdd:COG1196 619 GDTLLGRTLVAAR L EAALRRAVT L A grl R EV TLEG E GGSAGGSLTGGSRR E L L AALL E AEAELEELAER L AEEELELEEA 698
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720362589 552 MT A DHLR E KNIMR A DFNKTN E L L K E INAAL Q VSL E DM E EKYLMR E SRPEDIQMIA E LKSLITERDQVIKK L 622
Cdd:COG1196 699 LL A EEEE E RELAE A EEERLE E E L E E EALEE Q LEA E RE E LLEELL E EEELLEEEAL E ELPEPPDLEELERE L 769
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
50-523
6.72e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 55.71
E-value: 6.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 50 KIAQ L TKKVN EA krt Q Q E Y YE -- M EL KN L QNRLEGEVAQLN E AHGKTL E ELARKHHMAI E AVHSNASRDKIKLQT E LE E Q 127
Cdd:COG1196 275 ELEE L ELELE EA --- Q A E E YE ll A EL AR L EQDIARLEERRR E LEERLE E LEEELAELEE E LEELEEELEELEEEL E EA E E 351
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 128 YKK E KLSLEEDKNQLQ LE L E SLKQALGDK L TSANQ E IGRLQDLVRKSEQG L GSA E GLISS L QDSQ ERL QS EL DLTKGR L K 207
Cdd:COG1196 352 ELE E AEAELAEAEEAL LE A E AELAEAEEE L EELAE E LLEALRAAAELAAQ L EEL E EAEEA L LERL ERL EE EL EELEEA L A 431
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 208 E TKDALLNV E AE L QQERH E HEQTLATMKEEEK L RVDRM -- A HD LE IKWT E N L RQECSKLRQE L R L QHE E DKKSAMSQLLQ 285
Cdd:COG1196 432 E LEEEEEEE E EA L EEAAE E EAELEEEEEALLE L LAELL ee A AL LE AALA E L L EELAEAAARL L L L LEA E ADYEGFLEGVK 511
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 286 LKEREKNAARDS -------- WQKKV E DL L N -------------------- Q I SL LK QNLELQLCQSQTSLQQLQ A QFTQE 337
Cdd:COG1196 512 AALLLAGLRGLA gavavlig VEAAY E AA L E aalaaalqnivveddevaaa A I EY LK AAKAGRATFLPLDKIRAR A ALAAA 591
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 338 RQ R LTQELEELEEQHQQ R HKSLKEAHV --- L AFQ T MEEE - K E KEQ R ALE T HLQQKHSAE L QSLKDAHRE S ME G FRVEMEQ 413
Cdd:COG1196 592 LA R GAIGAAVDLVASDL R EADARYYVL gdt L LGR T LVAA r L E AAL R RAV T LAGRLREVT L EGEGGSAGG S LT G GSRRELL 671
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 414 ELQTLRFELED E GKAM LA SLRS EL NHQHA A SIDLL R HSHHQ E LAAAKM ELE RSIDISRRQSKEHMCRISD L Q EE LRHR E H 493
Cdd:COG1196 672 AALLEAEAELE E LAER LA EEEL EL EEALL A EEEEE R ELAEA E EERLEE ELE EEALEEQLEAEREELLEEL L E EE ELLE E E 751
490 500 510
....*....|....*....|....*....|
gi 1720362589 494 HITD L DKE vqhlh ENINT L TK ELE LKGK EI 523
Cdd:COG1196 752 ALEE L PEP ----- PDLEE L ER ELE RLER EI 776
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
127-515
1.26e-06
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 51.98
E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 127 QYKK E KLS LEE DKNQ L QLELES L KQ AL GD --- K L TSANQ E IGR L QDLVRKSEQGLGSAEGLISS L QDSQ E R L QSELDLTK 203
Cdd:TIGR02168 674 ERRR E IEE LEE KIEE L EEKIAE L EK AL AE lrk E L EELEE E LEQ L RKELEELSRQISALRKDLAR L EAEV E Q L EERIAQLS 753
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 204 GR L K E TKDALLNV E AE L QQERH E HEQTL A TMK E E E K l RVDRMAHD L eikwt EN LR QECSK LR Q EL R L QH EE dkksamsq L 283
Cdd:TIGR02168 754 KE L T E LEAEIEEL E ER L EEAEE E LAEAE A EIE E L E A - QIEQLKEE L ----- KA LR EALDE LR A EL T L LN EE -------- A 819
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 284 LQ L K ER EKNAA R D -- SWQKKV EDL LN QI SL L KQNL E l Q L CQSQTS L QQ L QAQFTQ E RQR L TQ E LEE LEE QHQQRHKS L K E 361
Cdd:TIGR02168 820 AN L R ER LESLE R R ia ATERRL EDL EE QI EE L SEDI E - S L AAEIEE L EE L IEELES E LEA L LN E RAS LEE ALALLRSE L E E 898
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 362 A hvlaf QTMEE E K E KEQRA L ETH L Q qkhsa EL QSLKDAHRESM EG FR V EMEQELQT L RF E LEDEGKAML A slrselnhq H 441
Cdd:TIGR02168 899 L ----- SEELR E L E SKRSE L RRE L E ----- EL REKLAQLELRL EG LE V RIDNLQER L SE E YSLTLEEAE A --------- L 959
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720362589 442 AAS I DLLRHSHHQE L AAAKMELERSIDISRRQSK E hmcr ISD L Q E ELRHREHHIT DL DKEVQH L H E N I NTLTK E 515
Cdd:TIGR02168 960 ENK I EDDEEEARRR L KRLENKIKELGPVNLAAIE E ---- YEE L K E RYDFLTAQKE DL TEAKET L E E A I EEIDR E 1029
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
121-319
4.31e-06
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 49.38
E-value: 4.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 121 Q TELEEQYKK E KLS L EEDKNQ L QL EL ES LK Q --- AL GDK L TSANQE I GR L QDLV R KS EQ G L GSA E GLISS L QDSQER L QS 197
Cdd:COG4942 18 Q ADAAAEAEA E LEQ L QQEIAE L EK EL AA LK K eek AL LKQ L AALERR I AA L ARRI R AL EQ E L AAL E AELAE L EKEIAE L RA 97
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 198 EL DLT K GR L K E TKD A ------------ LL NV E AE L QQE R HEH --- EQTL A TMKEE E K LR V D RMAHDLEIKWT E NL R Q E CS 262
Cdd:COG4942 98 EL EAQ K EE L A E LLR A lyrlgrqpplal LL SP E DF L DAV R RLQ ylk YLAP A RREQA E E LR A D LAELAALRAEL E AE R A E LE 177
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720362589 263 K L RQ EL ----- R L QHEEDKKSAMSQL L QLKER E KN A ARDSW Q KKV E D L LNQ I SL L KQNLELQ 319
Cdd:COG4942 178 A L LA EL eeera A L EALKAERQKLLAR L EKELA E LA A ELAEL Q QEA E E L EAL I AR L EAEAAAA 239
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
188-475
1.00e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.78
E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 188 L QDSQER L QS EL D L T K G R LK E TKDAL L NV E A E LQQERH E HEQTLATMK E E E KLRVDRMAHD LE IKWT E NLRQ E CSK L RQE 267
Cdd:COG1196 218 L KEELKE L EA EL L L L K L R EL E AELEE L EA E L E ELEAEL E ELEAELAEL E A E LEELRLELEE LE LELE E AQAE E YEL L AEL 297
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 268 L RL QHEEDKKSAMSQL L QLKER E KNAARDSWQKKV E D L LNQISL L KQN LE lqlcqsqtslq QLQAQFTQERQR L TQEL E E 347
Cdd:COG1196 298 A RL EQDIARLEERRRE L EERLE E LEEELAELEEEL E E L EEELEE L EEE LE ----------- EAEEELEEAEAE L AEAE E A 366
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 348 L E E QHQQRHKSLK E AHV LA fqtm EE EK E KEQR A L E THL Q QKHSA E LQSLKDAHR E SM E GFRV E M E QE L QT L RF E L E D E GK 427
Cdd:COG1196 367 L L E AEAELAEAEE E LEE LA ---- EE LL E ALRA A A E LAA Q LEELE E AEEALLERL E RL E EELE E L E EA L AE L EE E E E E E EE 442
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1720362589 428 A MLASLRS E LNHQHAASID L LRHSHHQ E L AA AKMELERSIDISRRQSK 475
Cdd:COG1196 443 A LEEAAEE E AELEEEEEAL L ELLAELL E E AA LLEAALAELLEELAEAA 490
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
56-389
1.80e-05
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 48.13
E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 56 K K VNEA K RTQQ E YY E M EL KN L QN RLE GEVAQ L N E AH g KT L E E LARKHH maieavhs NASRDKIK L QTE LEE q YKK E KLS L 135
Cdd:TIGR02168 210 E K AERY K ELKA E LR E L EL AL L VL RLE ELREE L E E LQ - EE L K E AEEELE -------- ELTAELQE L EEK LEE - LRL E VSE L 279
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 136 EE DKNQ LQ L EL ES L kqalgdkltsa NQ EI G RL - Q DLVRKS E Q glgsaegl ISS L QDSQ E R L QSE L DLTKGR L K E TKDA L L 214
Cdd:TIGR02168 280 EE EIEE LQ K EL YA L ----------- AN EI S RL e Q QKQILR E R -------- LAN L ERQL E E L EAQ L EELESK L D E LAEE L A 340
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 215 NV E AE L QQERH E H E QTL A TMK E E E KLR vd RMAHDLEIKWT E N L RQEC SK LR qelrl Q H E EDKK S AMSQLLQ L KE R EK -- N 292
Cdd:TIGR02168 341 EL E EK L EELKE E L E SLE A ELE E L E AEL -- EELESRLEELE E Q L ETLR SK VA ----- Q L E LQIA S LNNEIER L EA R LE rl E 413
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 293 AA R DSW Q KKV E D LL NQISLL - KQN L ELQ L CQSQTS L QQ LQ AQFTQERQR L TQEL EELEE QH Q QRHKSLK E AHV L AF ---- 367
Cdd:TIGR02168 414 DR R ERL Q QEI E E LL KKLEEA e LKE L QAE L EELEEE L EE LQ EELERLEEA L EELR EELEE AE Q ALDAAER E LAQ L QA rlds 493
330 340
....*....|....*....|...
gi 1720362589 368 - QTME E EK E KEQRALETH L QQKH 389
Cdd:TIGR02168 494 l ERLQ E NL E GFSEGVKAL L KNQS 516
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
82-239
8.09e-05
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 46.06
E-value: 8.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 82 GEVAQ L N E AHGKTL E E LA RKHHMAIEAVHSN A S R DKIK L QT ELEE ------ QYKK E KLS LE EDKNQ L QL EL ES L KQAL -- 153
Cdd:COG4913 255 EPIRE L A E RYAAAR E R LA ELEYLRAALRLWF A Q R RLEL L EA ELEE lraela RLEA E LER LE ARLDA L RE EL DE L EAQI rg 334
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 154 -- GD K L TSANQ EI G RL QDLVRKS E QGLGSA E G L ISS L QDSQERLQS E LDLTKGRLKETKD AL LNVEAE L QQERH E H E QT L 231
Cdd:COG4913 335 ng GD R L EQLER EI E RL ERELEER E RRRARL E A L LAA L GLPLPASAE E FAALRAEAAALLE AL EEELEA L EEALA E A E AA L 414
....*...
gi 1720362589 232 ATMKE E EK 239
Cdd:COG4913 415 RDLRR E LR 422
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
46-614
1.59e-04
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 45.05
E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 46 KMSK K IAQ L TKKV ---- N E AKRTQQ E YY E M E LKNLQ ----- NR L EGE VAQL NEAHGKTLE E L -- ARKHHMAI E AVHSNAS 114
Cdd:TIGR02168 341 ELEE K LEE L KEEL esle A E LEELEA E LE E L E SRLEE leeql ET L RSK VAQL ELQIASLNN E I er LEARLERL E DRRERLQ 420
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 115 RDKIK L QTE LEE QYK KE KLSLE E DKNQLQL EL ESLKQA L GDK L TSANQ E IGRLQDLVRKS E QG L GSAEGLIS SL QDS QE R 194
Cdd:TIGR02168 421 QEIEE L LKK LEE AEL KE LQAEL E ELEEELE EL QEELER L EEA L EELRE E LEEAEQALDAA E RE L AQLQARLD SL ERL QE N 500
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 195 L ------------- QS E L DLTK G R L K E tkda L LN V EAELQQE ---------------- RHEHEQTL A TM K EE E KL RV --- 242
Cdd:TIGR02168 501 L egfsegvkallkn QS G L SGIL G V L S E ---- L IS V DEGYEAA ieaalggrlqavvven LNAAKKAI A FL K QN E LG RV tfl 576
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 243 --- DRMAHDLEIKWT E N L RQECSK L RQELR L QHEED K ------------------ KS A MSQLLQ L KEREKNAAR D SWQ -- 299
Cdd:TIGR02168 577 pld SIKGTEIQGNDR E I L KNIEGF L GVAKD L VKFDP K lrkalsyllggvlvvddl DN A LELAKK L RPGYRIVTL D GDL vr 656
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 300 ---------- K KVEDL L NQISLLK q N LE LQLCQSQTSLQQ L QAQFTQE R QR L TQEL EELE EQHQQRHKSLKEAHV L AFQT 369
Cdd:TIGR02168 657 pggvitggsa K TNSSI L ERRREIE - E LE EKIEELEEKIAE L EKALAEL R KE L EELE EELE QLRKELEELSRQISA L RKDL 735
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 370 MEE E K E K EQ RALETHLQQ K HSA EL Q --- SLKDAHR E SM E GFRV E M E Q E LQT L RFEL E d EG K AM L AS LR SE L NHQH A A sid 446
Cdd:TIGR02168 736 ARL E A E V EQ LEERIAQLS K ELT EL E aei EELEERL E EA E EELA E A E A E IEE L EAQI E - QL K EE L KA LR EA L DELR A E --- 811
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 447 llrhsh HQE L AAAKME L ERSIDISR R QSKEHMC R IS DL Q E ELRHREHH I TD L DK E VQH L H E N I NT L TK ELE LKGK E ilrv 526
Cdd:TIGR02168 812 ------ LTL L NEEAAN L RERLESLE R RIAATER R LE DL E E QIEELSED I ES L AA E IEE L E E L I EE L ES ELE ALLN E ---- 881
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 527 R SESNQQMR L HEQD L ---- NKRL E K E LDVMTADH - L R E KNIMR A DFN -------- KTNE L LKEINAALQVS LE DM E EKYL 593
Cdd:TIGR02168 882 R ASLEEALA L LRSE L eels EELR E L E SKRSELRR e L E E LREKL A QLE lrleglev RIDN L QERLSEEYSLT LE EA E ALEN 961
650 660
....*....|....*....|..
gi 1720362589 594 MR E SRP E DIQ - MIAE L KSL I T E 614
Cdd:TIGR02168 962 KI E DDE E EAR r RLKR L ENK I K E 983
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
365-622
5.86e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 43.00
E-value: 5.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 365 LAFQTMEE E K E K E QRA L ETHLQQKHSA EL QSLKDAHRESM E GFRV E --- M E Q EL QT LR F ELE DEGKAMLASLRS E lnhqh 441
Cdd:COG1196 216 RELKEELK E L E A E LLL L KLRELEAELE EL EAELEELEAEL E ELEA E lae L E A EL EE LR L ELE ELELELEEAQAE E ----- 290
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 442 aasidllrhshh Q EL A A AKME LE RS I DISRRQSK E HMC R ISD L Q EEL RHR E HHITD L DK E VQH L H E NINTLTK ELE LKGK 521
Cdd:COG1196 291 ------------ Y EL L A ELAR LE QD I ARLEERRR E LEE R LEE L E EEL AEL E EELEE L EE E LEE L E E ELEEAEE ELE EAEA 358
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 522 E ILRV --- RS E SNQQMRLH E QD L NKRL E KE L DVMT A --- DHLREKNIMR A DFNKTNE L LKEINAALQVSLEDM E EKYLMR 595
Cdd:COG1196 359 E LAEA eea LL E AEAELAEA E EE L EELA E EL L EALR A aae LAAQLEELEE A EEALLER L ERLEEELEELEEALA E LEEEEE 438
250 260
....*....|....*....|....*..
gi 1720362589 596 E SRPEDIQMIA E LKS L IT E RDQVIKK L 622
Cdd:COG1196 439 E EEEALEEAAE E EAE L EE E EEALLEL L 465
PTZ00121
PTZ00121 MAEBL; Provisional
48-548
7.65e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.82
E-value: 7.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 48 S KK I A QLT KK VN E AKRTQQ E YYEM E LKNLQNRL E GEVAQLNE A HG K TL E ELARKHHMAIE A VHSNASRDKI K LQT E LEEQ 127
Cdd:PTZ00121 1327 A KK K A DAA KK KA E EAKKAA E AAKA E AEAAADEA E AAEEKAEA A EK K KE E AKKKADAAKKK A EEKKKADEAK K KAE E DKKK 1406
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 128 YKKE K LSLEED K NQLQLELESLKQALG D KLTSANQ E IGRLQDLVR K S E QG l GS AE GLISSLQDSQER lqsel D LT K GRLK 207
Cdd:PTZ00121 1407 ADEL K KAAAAK K KADEAKKKAEEKKKA D EAKKKAE E AKKADEAKK K A E EA - KK AE EAKKKAEEAKKA ----- D EA K KKAE 1480
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 208 E T K D A lln V EA ELQQ E RHEHEQTL A TMKE E E K LRV D RMAHDL E I K WTENLRQ - E CS K LRQ E LRLQH E ED K KSAMSQLLQ L 286
Cdd:PTZ00121 1481 E A K K A --- D EA KKKA E EAKKKADE A KKAA E A K KKA D EAKKAE E A K KADEAKK a E EA K KAD E AKKAE E KK K ADELKKAEE L 1557
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 287 K ER E K na ARDSWQK K VEDLLNQIS L L K QNLELQL cqsqtslqqlqaqftq E RQ R LTQELEEL EE QHQQRHKSL K E A HVLA 366
Cdd:PTZ00121 1558 K KA E E -- KKKAEEA K KAEEDKNMA L R K AEEAKKA ---------------- E EA R IEEVMKLY EE EKKMKAEEA K K A EEAK 1619
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 367 FQTM E EE K EK E QRALETH L QQ K HSA E LQSLKDAHRES m E GFRVEMEQ E LQT lrfel ED E G K AMLASLRSELNHQHA A SID 446
Cdd:PTZ00121 1620 IKAE E LK K AE E EKKKVEQ L KK K EAE E KKKAEELKKAE - E ENKIKAAE E AKK ----- AE E D K KKAEEAKKAEEDEKK A AEA 1693
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 447 L LRHSHH ---- Q EL AAAKM E LERSIDISRRQSK E HMCRISDLQE E LRHREHHITDLD K E v QHLHEN I NT L T KE L E L K GK E 522
Cdd:PTZ00121 1694 L KKEAEE akka E EL KKKEA E EKKKAEELKKAEE E NKIKAEEAKK E AEEDKKKAEEAK K D - EEEKKK I AH L K KE E E K K AE E 1772
490 500
....*....|....*....|....*.
gi 1720362589 523 I l R VRS E SNQQMR L H E Q D LNK R L E KE 548
Cdd:PTZ00121 1773 I - R KEK E AVIEEE L D E E D EKR R M E VD 1797
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
49-515
1.19e-03
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 42.23
E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 49 KKIAQ L TKKVN E AKRTQQ E Y y E M EL KNLQNR L EGEVAQ L N EA HGKTL E ELARKH hm AIEAVHSN A S R DKIK L QTE LEE QY 128
Cdd:COG1196 330 EELEE L EEELE E LEEELE E A - E E EL EEAEAE L AEAEEA L L EA EAELA E AEEELE -- ELAEELLE A L R AAAE L AAQ LEE LE 406
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 129 KK E K l S L E E DKNQ L QL ELE S L KQ AL GDKLTSANQ E IGR L QDLVRKSEQGLGSA E G L ISS L QDSQ E RLQS -- ELDLTKGRL 206
Cdd:COG1196 407 EA E E - A L L E RLER L EE ELE E L EE AL AELEEEEEE E EEA L EEAAEEEAELEEEE E A L LEL L AELL E EAAL le AALAELLEE 485
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 207 KETKD A L L NVEA E LQQERHEHEQTLATMKEEEK LR VDRM A HDLE I KWTENLRQECSKLRQELRLQ - HE ED KKS A MSQLLQ 285
Cdd:COG1196 486 LAEAA A R L LLLL E AEADYEGFLEGVKAALLLAG LR GLAG A VAVL I GVEAAYEAALEAALAAALQN i VV ED DEV A AAAIEY 565
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 286 LK EREKNA A RDSWQK K VEDLLNQISL L KQNLELQLCQSQT S LQQLQAQF ----------- T QERQ RL TQE L EELEEQHQQ 354
Cdd:COG1196 566 LK AAKAGR A TFLPLD K IRARAALAAA L ARGAIGAAVDLVA S DLREADAR yyvlgdtllgr T LVAA RL EAA L RRAVTLAGR 645
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 355 RHKSLK E AHVLAFQTMEEEKEKEQRALETHLQQKHSA EL QSLKDAHRESM E GFRVEM E Q E LQT L RFEL E DEGKAM L ASLR 434
Cdd:COG1196 646 LREVTL E GEGGSAGGSLTGGSRRELLAALLEAEAELE EL AERLAEEELEL E EALLAE E E E ERE L AEAE E ERLEEE L EEEA 725
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 435 S E LNHQHAASID L LRHSHHQ EL AAAKMEL E RSIDISRRQSKE hmc RISD L QE E L ------------------- R HRE -- H 493
Cdd:COG1196 726 L E EQLEAEREEL L EELLEEE EL LEEEALE E LPEPPDLEELER --- ELER L ER E I ealgpvnllaieeyeelee R YDF ls E 802
490 500
....*....|....*....|..
gi 1720362589 494 HIT DL DKEVQH L H E N I NTLTK E 515
Cdd:COG1196 803 QRE DL EEARET L E E A I EEIDR E 824
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
220-627
2.77e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 40.81
E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 220 LQQE R H E H E QT L ATMK E EEK l R VDRMAHD LE IKW t EN L RQECS K LRQELR L QH E EDKKSAMSQL L Q L K E - RE KNAARDSW 298
Cdd:TIGR02168 170 YKER R K E T E RK L ERTR E NLD - R LEDILNE LE RQL - KS L ERQAE K AERYKE L KA E LRELELALLV L R L E E l RE ELEELQEE 247
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 299 Q K KV E DL L NQISLLK Q N LE LQ L CQSQTSLQQ L QAQFTQERQR L TQELE E leeqhqqrh K S LK E AHVLAFQTMEEEK E KEQ 378
Cdd:TIGR02168 248 L K EA E EE L EELTAEL Q E LE EK L EELRLEVSE L EEEIEELQKE L YALAN E --------- I S RL E QQKQILRERLANL E RQL 318
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 379 RA LE TH L QQKH S AELQSLKDAH resmegfrv E M E QE L QT L RF ELE DE g K A M L AS L RS EL nhqhaasidllrhshh Q EL AA 458
Cdd:TIGR02168 319 EE LE AQ L EELE S KLDELAEELA --------- E L E EK L EE L KE ELE SL - E A E L EE L EA EL ---------------- E EL ES 372
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 459 AKM ELE RSIDIS R RQSKEHMCR I SD L QE E LRHR E HHITD L DKEVQH L HEN I NT L T K E LE LKGKEI L RVRS E SNQQMRLHE 538
Cdd:TIGR02168 373 RLE ELE EQLETL R SKVAQLELQ I AS L NN E IERL E ARLER L EDRRER L QQE I EE L L K K LE EAELKE L QAEL E ELEEELEEL 452
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 539 Q DLNK RLE KE L DVMTADHLREKNIMR A DFNKTNE L lkein A A LQV SLE DME E KY lmr E SRP E DIQMIAELK S LITERDQ V 618
Cdd:TIGR02168 453 Q EELE RLE EA L EELREELEEAEQALD A AERELAQ L ----- Q A RLD SLE RLQ E NL --- E GFS E GVKALLKNQ S GLSGILG V 524
....*....
gi 1720362589 619 IKK LIS SS E 627
Cdd:TIGR02168 525 LSE LIS VD E 533
CCDC158
pfam15921 Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...
58-542
3.41e-03
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain]
Cd Length: 1112
Bit Score: 40.49
E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 58 VN E AK R T Q QEY Y EME L KN L QN --- R L EG E VAQLNEAHGKTL EEL ARKHHM A - I E AVHSNAS RD KI --------- K LQ TE L 124
Cdd:pfam15921 304 IQ E QA R N Q NSM Y MRQ L SD L ES tvs Q L RS E LREAKRMYEDKI EEL EKQLVL A n S E LTEARTE RD QF sqesgnldd Q LQ KL L 383
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 125 EEQY K K EK - LSLE EDK N QL -------- QLELES L KQA L G D K ltsa N Q E IG RL QD L VRK - SEQGL G SA E GLISSL Q DSQ E R 194
Cdd:pfam15921 384 ADLH K R EK e LSLE KEQ N KR lwdrdtgn SITIDH L RRE L D D R ---- N M E VQ RL EA L LKA m KSECQ G QM E RQMAAI Q GKN E S 459
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 195 L QSELD LT k GR L KE TK DA L LN V EA EL QQERHEH E QTLA T MKE ----- E EK L R V drmahdleikw T E NLRQ E CS KLR Q -- E 267
Cdd:pfam15921 460 L EKVSS LT - AQ L ES TK EM L RK V VE EL TAKKMTL E SSER T VSD ltasl Q EK E R A ----------- I E ATNA E IT KLR S rv D 527
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 268 L R LQ HEEDK K SAMSQ L lqlke R EKNAARDSWQKKVEDLLNQ I SL L K Q NL E lqlcqsqt SLQ QL QA Q FTQERQRLTQ E LEE 347
Cdd:pfam15921 528 L K LQ ELQHL K NEGDH L ----- R NVQTECEALKLQMAEKDKV I EI L R Q QI E -------- NMT QL VG Q HGRTAGAMQV E KAQ 594
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 348 LE EQHQQ R HKS L K E AHV L AFQTMEEEK E K E Q R ALETH L QQ ----- KH S AE L QSL KD AHR E smegf R VEMEQ E LQ T L R F EL 422
Cdd:pfam15921 595 LE KEIND R RLE L Q E FKI L KDKKDAKIR E L E A R VSDLE L EK vklvn AG S ER L RAV KD IKQ E ----- R DQLLN E VK T S R N EL 669
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 423 EDEGKAMLASL R SEL N H qh AASIDLLRHSHHQE L AA A KM ELE RSIDISR ----------------- R Q SKEHMCR I SD LQ 485
Cdd:pfam15921 670 NSLSEDYEVLK R NFR N K -- SEEMETTTNKLKMQ L KS A QS ELE QTRNTLK smegsdghamkvamgmq K Q ITAKRGQ I DA LQ 747
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720362589 486 EELRHR E HHI T DLD KE VQH L H E NI N T L TK EL ELKGK E ILRVRS E ---- SN Q QM RL H E QDL N 542
Cdd:pfam15921 748 SKIQFL E EAM T NAN KE KHF L K E EK N K L SQ EL STVAT E KNKMAG E levl RS Q ER RL K E KVA N 808
DUF3584
pfam12128 Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
47-471
3.50e-03
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain]
Cd Length: 1191
Bit Score: 40.59
E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 47 MSKKIAQ LT K K VNEA krtq QEY Y EMELKNLQNRLEGEV A QLNEAHG K TL E ELA R KH hmaieavh SN A SR D KIK L QT EL E E 126
Cdd:pfam12128 359 LEERLKA LT G K HQDV ---- TAK Y NRRRSKIKEQNNRDI A GIKDKLA K IR E ARD R QL -------- AV A ED D LQA L ES EL R E 426
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 127 Q YKKE KL SLE E DKNQ L QLE L ES LK QA L GDKLTSANQ -- EIGRLQDLVRKSEQGLGS A EG lisslqd SQ ERLQSEL DLTKG 204
Cdd:pfam12128 427 Q LEAG KL EFN E EEYR L KSR L GE LK LR L NQATATPEL ll QLENFDERIERAREEQEA A NA ------- EV ERLQSEL RQARK 499
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 205 R LKETKD AL LNVEAE L QQERHEHEQT latmkeee K L RVDRM A HD L ------- EIK W TENLRQEC S K --- L R QE L RLQHEE 274
Cdd:pfam12128 500 R RDQASE AL RQASRR L EERQSALDEL -------- E L QLFPQ A GT L lhflrke APD W EQSIGKVI S P ell H R TD L DPEVWD 571
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 275 DKKSAMSQ L LQL K ERE K NAARDS W QKKV E D L LNQISLLKQN L ELQ lcqs QTSLQQLQA Q FT Q ERQR L TQELE E LEEQHQQ 354
Cdd:pfam12128 572 GSVGGELN L YGV K LDL K RIDVPE W AASE E E L RERLDKAEEA L QSA ---- REKQAAAEE Q LV Q ANGE L EKASR E ETFARTA 647
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 355 r H K SLKEAHVLA F QTMEE EK E K EQR AL ETHLQQKHS ------ A E L QS L KDA H RESM E GFR --- V E MEQ E L Q TLRFEL E DE 425
Cdd:pfam12128 648 - L K NARLDLRRL F DEKQS EK D K KNK AL AERKDSANE rlnsle A Q L KQ L DKK H QAWL E EQK eqk R E ART E K Q AYWQVV E GA 726
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1720362589 426 GK A M LA S L RSEL --- NHQHA A SIDL L RHSHHQE LA AAKMELERSIDIS R 471
Cdd:pfam12128 727 LD A Q LA L L KAAI aar RSGAK A ELKA L ETWYKRD LA SLGVDPDVIAKLK R 775
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
48-317
7.81e-03
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 39.28
E-value: 7.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 48 S KKIAQLTK K VN E AKRTQQE yyeme L KNLQNR L EGEVAQ L N E AHGKTLE E LARKHHM -- AI EA VHSNASR D KI KL QTE L E 125
Cdd:TIGR02169 708 S QELSDASR K IG E IEKEIEQ ----- L EQEEEK L KERLEE L E E DLSSLEQ E IENVKSE lk EL EA RIEELEE D LH KL EEA L N 782
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 126 EQYKK eklsleedknqlql ELE S LKQALGDK L TSANQ E IG R LQDLV R KS EQ G L GSAEGLISS L QDSQER LQ SELDLT K GR 205
Cdd:TIGR02169 783 DLEAR -------------- LSH S RIPEIQAE L SKLEE E VS R IEARL R EI EQ K L NRLTLEKEY L EKEIQE LQ EQRIDL K EQ 848
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720362589 206 L K ETKDALL N VEA --- EL QQ E RH E H E QT L ATMKEE - EK L RVD R MAHDLEIKWT E NLRQ E CSKLRQEL R LQHE E D K KSAMS 281
Cdd:TIGR02169 849 I K SIEKEIE N LNG kke EL EE E LE E L E AA L RDLESR l GD L KKE R DELEAQLREL E RKIE E LEAQIEKK R KRLS E L K AKLEA 928
250 260 270
....*....|....*....|....*....|....*.
gi 1720362589 282 QLLQ L K E R E KNAAR D SWQKKV E DL L NQISLLK Q NL E 317
Cdd:TIGR02169 929 LEEE L S E I E DPKGE D EEIPEE E LS L EDVQAEL Q RV E 964
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
