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Conserved domains on  [gi|1622938299|ref|XP_028704063|]
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LOW QUALITY PROTEIN: neuropeptide-like protein C4orf48 homolog [Macaca mulatta]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Neuropep_like super family cl21027
Neuropeptide-like; This family contains putative neuropeptides.
 66-125 2.24e-29

Neuropeptide-like; This family contains putative neuropeptides.


The actual alignment was detected with superfamily member pfam15161:

Pssm-ID: 317565  Cd Length: 61  Bit Score: 100.80  E-value: 2.24e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622938299  66 AEPAGSAVPAQSRPCVDCHAFEFMQRALQDLRKTACSLDARTETLLLQAERRALCACWPA 125
Cdd:pfam15161   2 DQDAGSAIPAESRPCVDCHAFEFMQRALQDLKKTAYNLDARTETLLLRAEKRALCDCMPA 61
 
Name Accession Description Interval E-value
Neuropep_like pfam15161
Neuropeptide-like; This family contains putative neuropeptides.
 66-125 2.24e-29

Neuropeptide-like; This family contains putative neuropeptides.


Pssm-ID: 317565  Cd Length: 61  Bit Score: 100.80  E-value: 2.24e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622938299  66 AEPAGSAVPAQSRPCVDCHAFEFMQRALQDLRKTACSLDARTETLLLQAERRALCACWPA 125
Cdd:pfam15161   2 DQDAGSAIPAESRPCVDCHAFEFMQRALQDLKKTAYNLDARTETLLLRAEKRALCDCMPA 61
 
Name Accession Description Interval E-value
Neuropep_like pfam15161
Neuropeptide-like; This family contains putative neuropeptides.
 66-125 2.24e-29

Neuropeptide-like; This family contains putative neuropeptides.


Pssm-ID: 317565  Cd Length: 61  Bit Score: 100.80  E-value: 2.24e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622938299  66 AEPAGSAVPAQSRPCVDCHAFEFMQRALQDLRKTACSLDARTETLLLQAERRALCACWPA 125
Cdd:pfam15161   2 DQDAGSAIPAESRPCVDCHAFEFMQRALQDLKKTAYNLDARTETLLLRAEKRALCDCMPA 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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