|
Name |
Accession |
Description |
Interval |
E-value |
| FAM184 |
pfam15665 |
Family with sequence similarity 184, A and B; The function of FAM184 is not known. |
57-267 |
5.77e-69 |
|
Family with sequence similarity 184, A and B; The function of FAM184 is not known.
Pssm-ID: 464788 [Multi-domain] Cd Length: 211 Bit Score: 229.16 E-value: 5.77e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 57 VIYALNTKNDEHESAIQALKDAHEEEIQQILAETREKILQYKSKVTEELDLRRKIQVLEASLEDHIKMKQQALTEFEAYK 136
Cdd:pfam15665 1 VIYALNTKNDEHEAEIQALKEAHEEEIQQILAETREKILQYKSKIGEELDLKRRIQTLEESLEQHERMKRQALTEFEQYK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 137 HRVEDMQLCAEAQHVQRIVTMSREVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDLRTAHRREIQELLKSQQDHSASVN 216
Cdd:pfam15665 81 RRVEERELKAEAEHRQRVVELSREVEEAKRAFEEKLESFEQLQAQFEQEKRKALEELRAKHRQEIQELLTTQRAQSASSL 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1622930354 217 KGQEKAEELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFYERELD 267
Cdd:pfam15665 161 AEQEKLEELHKAELESLRKEVEDLRKEKKKLAEEYEQKLSKAQAFYERELE 211
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
245-829 |
2.96e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 2.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 245 KKLIEDYEGKLNKAQSFYERELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLD 324
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 325 KCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLvlkashigmlqatqmtqevtiK 404
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---------------------E 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 405 DLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEyyERELKNLQNRLEEEVTQLNEAHSK 484
Cdd:COG1196 355 EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA--EEALLERLERLEEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 485 TLEELAwkhhmaieavhsnAIRDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENLKEVLEDKLNTANQEIGRLQDLVRK 564
Cdd:COG1196 433 LEEEEE-------------EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 565 SEQGLGSAEG-LIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKED----------EKLKV 633
Cdd:COG1196 500 EADYEGFLEGvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEylkaakagraTFLPL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 634 DKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLEIQLSQ 713
Cdd:COG1196 580 DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAG 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 714 SQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHSAELQSLKDAHRE 793
Cdd:COG1196 660 GSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
570 580 590
....*....|....*....|....*....|....*...
gi 1622930354 794 SMEGFRIEMEQELQTLRFELEDEG--KAMLASLRSELN 829
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEelERELERLEREIE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
278-994 |
2.06e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 278 ESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMAL 357
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 358 -------LSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSK 430
Cdd:TIGR02168 322 eaqleelESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 431 TQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEEVTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKK 510
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 511 LQmelEEQHNKEKLNLEEDKNQLQQELENLKEVLeDKLNTANQEIGRLQDLVrKSEQGLGSA------EGLIASLQDSQE 584
Cdd:TIGR02168 482 RE---LAQLQARLDSLERLQENLEGFSEGVKALL-KNQSGLSGILGVLSELI-SVDEGYEAAieaalgGRLQAVVVENLN 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 585 RLQTELDLTKDS---------LKETKDALLNVEGELEQERQQHEETIAAMKEDEKLKVDKMAHDL--EIKWTENLRQ--- 650
Cdd:TIGR02168 557 AAKKAIAFLKQNelgrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLlgGVLVVDDLDNale 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 651 ECSKLREELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQ 730
Cdd:TIGR02168 637 LAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQ 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 731 RLTQELEELEEQHQQRHKslkeahvLAFQTMEEEKEKEQRALENHLQQKHSAELQSLKDAhRESMEGFRIEMEQELQTLR 810
Cdd:TIGR02168 717 LRKELEELSRQISALRKD-------LARLEAEVEQLEERIAQLSKELTELEAEIEELEER-LEEAEEELAEAEAEIEELE 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 811 FELEdEGKAMLASLRSELNHQHAAaidllrhnhHQELAAAKMELERSIDISRRQSKEHMCRITDLQEELRHREHHISELD 890
Cdd:TIGR02168 789 AQIE-QLKEELKALREALDELRAE---------LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLA 858
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 891 KEVQHLHENISALTKELEfkgkEILRIRSESNQQIRLHEQDL----NKRLEKELDVMTADH-LREKNIMRADFN------ 959
Cdd:TIGR02168 859 AEIEELEELIEELESELE----ALLNERASLEEALALLRSELeelsEELRELESKRSELRReLEELREKLAQLElrlegl 934
|
730 740 750
....*....|....*....|....*....|....*..
gi 1622930354 960 --KTNELLKEINAALQVSLEEMEEKYLMRESKPEDIQ 994
Cdd:TIGR02168 935 evRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEAR 971
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
90-627 |
3.73e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 3.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 90 TREKILQYKSKVTEELDLRRKIQVLEASLEDHIKMKQQALTEFEAYKHRVEDMQlcaeaqhvQRIVTMSREVEEIRRKFE 169
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR--------LELEELELELEEAQAEEY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 170 EKLRSFGQL--QVQFEKDKRLALEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELHRmEVESLNKMLEELRLEQKKL 247
Cdd:COG1196 292 ELLAELARLeqDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE-ELEEAEAELAEAEEALLEA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 248 IEDYEGKLNKAQSFYERELDTLKRSQLFTA----------------ESLQASKEKEADLRKEFQGQEAILRKTIGKLKTE 311
Cdd:COG1196 371 EAELAEAEEELEELAEELLEALRAAAELAAqleeleeaeeallerlERLEEELEELEEALAELEEEEEEEEEALEEAAEE 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 312 LQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGM 391
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 392 LQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRL 471
Cdd:COG1196 531 GVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 472 EEEVTQLNEAHSKTLEELAWKHHMAIE-AVHSNAIRDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENLKEVLEDKLNT 550
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRrAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAE 690
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622930354 551 ANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKE 627
Cdd:COG1196 691 EELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELER 767
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
177-703 |
4.38e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.80 E-value: 4.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 177 QLQVQFEKDKRLALEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELhRMEVESLNKMLEELRLEQKKL---IEDYEG 253
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEEL-RLELEELELELEEAQAEEYELlaeLARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 254 KLNKAQ---SFYERELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKL- 329
Cdd:COG1196 303 DIARLEerrRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELe 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 330 ---------QTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQE 400
Cdd:COG1196 383 elaeelleaLRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 401 VTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQ--------------EYYERELKN 466
Cdd:COG1196 463 ELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLrglagavavligveAAYEAALEA 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 467 -LQNRLEEEVTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENL--KEV 543
Cdd:COG1196 543 aLAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVlgDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 544 LEDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLnvEGELEQERQQHEETIA 623
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEEL--AERLAEEELELEEALL 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 624 AMKEDEKLKVDKMAHDLEIKwTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLL 703
Cdd:COG1196 701 AEEEEERELAEAEEERLEEE-LEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
64-625 |
1.64e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.26 E-value: 1.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 64 KNDEHESAIQALKDAHEEEIQQILAETREKILQYKSKVTEELDLRRKIQVLEASLEDHIKMKQQALTEFEAYKHRVEDMQ 143
Cdd:COG1196 250 ELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 144 LcAEAQHVQRIVTMSREVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDLRTAHRREIQEL-LKSQQDHSASVNKGQEKA 222
Cdd:COG1196 330 E-ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLeALRAAAELAAQLEELEEA 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 223 EELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFYERELDTLKRSQLfTAESLQASKEKEADLRKEFQGQEAILR 302
Cdd:COG1196 409 EEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA-LLELLAELLEEAALLEAALAELLEELA 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 303 KTIGKLKTELQMVQDEAGSLLDKcqKLQTALATAENNVQGLQKQLDDAKEGEMALlskhkeVESELAAARERLQQQASDL 382
Cdd:COG1196 488 EAAARLLLLLEAEADYEGFLEGV--KAALLLAGLRGLAGAVAVLIGVEAAYEAAL------EAALAAALQNIVVEDDEVA 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 383 VLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQE-YYE 461
Cdd:COG1196 560 AAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAlRRA 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 462 RELKNLQNRLEEEVTQLNEAHSKTLEElawkhhmaiEAVHSNAIRDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENLK 541
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGS---------RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 542 EVLEDKLNTANQEIGRLQDLVRKSEQglgsaegliaslqdSQERLQTELDLTKDSLKETKDALLNVEgELEQERQQHEET 621
Cdd:COG1196 711 EAEEERLEEELEEEALEEQLEAEREE--------------LLEELLEEEELLEEEALEELPEPPDLE-ELERELERLERE 775
|
....
gi 1622930354 622 IAAM 625
Cdd:COG1196 776 IEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
403-1013 |
2.06e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 403 IKDLESEKSRaneRLSQLEEERAfLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEEVTQLNEAH 482
Cdd:COG1196 191 LEDILGELER---QLEPLERQAE-KAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 483 SKtLEELAWKHHMAIEAVHSN----AIRDKKKLQMELEEQHNKEKL-NLEEDKNQLQQELENLKEVLEDklntANQEIGR 557
Cdd:COG1196 267 AE-LEELRLELEELELELEEAqaeeYELLAELARLEQDIARLEERRrELEERLEELEEELAELEEELEE----LEEELEE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 558 LQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEDEKLkvdkma 637
Cdd:COG1196 342 LEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER------ 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 638 hDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKEREKNAardswQKKVEDLLNQISLLKQNLEIQLSQSQTS 717
Cdd:COG1196 416 -LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL-----LELLAELLEEAALLEAALAELLEELAEA 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 718 LQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHSAELQSLKDAhresmeg 797
Cdd:COG1196 490 AARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAA------- 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 798 frIEMEQELQTLRFELEDEGKAMLASLRSELNHQHAAAIDLLRHNHHQELAAAKMELERSIDISRRQSKEHMCRITDLQE 877
Cdd:COG1196 563 --IEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAV 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 878 ELRHREHHISELDKEVQHLHENISALTKELEFKGKEILRIRSESNQQIRLHEQDLNKRLEKELDVMTADHLREKNIMRAD 957
Cdd:COG1196 641 TLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEE 720
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622930354 958 FN---KTNELLKEINAALQVSLEEMEEKYLMRESKPEDIQMITELKAMLTERDQIIKKL 1013
Cdd:COG1196 721 LEeeaLEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
44-545 |
5.66e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 5.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 44 HLKMSKKIAQLTKVIYALNTKNDEHESAIQALKD---AHEEEIQQILAETREKILQYKSKVTEELDLRRKIQVLEASLED 120
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEErrrELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 121 HIKMKQQALTEFEAYKHRVEDMQLcAEAQHVQRIVTMSREVEEIRRKFEEKLRsfgqlQVQFEKDKRLALEDLRTAHRRE 200
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEE-ELEELAEELLEALRAAAELAAQLEELEE-----AEEALLERLERLEEELEELEEA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 201 IQELLKSQQDHSASVNKGQEKAEELHRmEVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFYERELDTLKRSQLFTAESL 280
Cdd:COG1196 430 LAELEEEEEEEEEALEEAAEEEAELEE-EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 281 QASKEKEADLRKEFQGQEAILRKTIGKLKTEL---------QMVQDEAGSLLDKCQKLQTAL---ATAENNVQGLQKQLD 348
Cdd:COG1196 509 GVKAALLLAGLRGLAGAVAVLIGVEAAYEAALeaalaaalqNIVVEDDEVAAAAIEYLKAAKagrATFLPLDKIRARAAL 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 349 DAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQmTQEVTIKDLESEKSRANERLSQLEEERAFLQ 428
Cdd:COG1196 589 AAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL-RRAVTLAGRLREVTLEGEGGSAGGSLTGGSR 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 429 SKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEEVTQLNEAHSKTLEELAwkhhmaiEAVHSNAIRDK 508
Cdd:COG1196 668 RELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQ-------LEAEREELLEE 740
|
490 500 510
....*....|....*....|....*....|....*..
gi 1622930354 509 KKLQMELEEQHNKEKLNLEEDKNQLQQELENLKEVLE 545
Cdd:COG1196 741 LLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
49-708 |
6.02e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.47 E-value: 6.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 49 KKIAQLTKVIYALNTKNDEHESAIQALKDAHEEEIQQILAETREKILQYKSKV----TEELDLRRKIQVLEASLEDHIKM 124
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIgeleAEIASLERSIAEKERELEDAEER 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 125 KQQALTEFEAYKHRVEDMQLCAEAQHVQRIVTMSR-------------EVEEIRRKFEEKLRSFGQLQVQFEKDKRlALE 191
Cdd:TIGR02169 324 LAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEyaelkeeledlraELEEVDKEFAETRDELKDYREKLEKLKR-EIN 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 192 DLRTAHRREIQELLKS--------------QQDHSASVNKGQEKAEELHRME--VESLNKMLEELRLEQKKLIEDYEgKL 255
Cdd:TIGR02169 403 ELKRELDRLQEELQRLseeladlnaaiagiEAKINELEEEKEDKALEIKKQEwkLEQLAADLSKYEQELYDLKEEYD-RV 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 256 NKAQSFYERELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLD----------- 324
Cdd:TIGR02169 482 EKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNnvvveddavak 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 325 ------KCQKLQTALATAENNVQGLQKQL------------------DDAKEGEMALLSKHKEVESELAAARE-----RL 375
Cdd:TIGR02169 562 eaiellKRRKAGRATFLPLNKMRDERRDLsilsedgvigfavdlvefDPKYEPAFKYVFGDTLVVEDIEAARRlmgkyRM 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 376 QQQASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTqsldEEQKQQILELEKKVSEAKRT 455
Cdd:TIGR02169 642 VTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL----RRIENRLDELSQELSDASRK 717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 456 QQEYYER--ELKNLQNRLEEEVTQLNEAHSKTLEELAwkhhmaieavhsNAIRDKKKLQMELEEqhnkeklnLEEDKNQL 533
Cdd:TIGR02169 718 IGEIEKEieQLEQEEEKLKERLEELEEDLSSLEQEIE------------NVKSELKELEARIEE--------LEEDLHKL 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 534 QQELENLK--------EVLEDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALL 605
Cdd:TIGR02169 778 EEALNDLEarlshsriPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 606 NVEGELEQERQQHEETIAAMKEDEK----LKVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKERE 681
Cdd:TIGR02169 858 NLNGKKEELEEELEELEAALRDLESrlgdLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
730 740
....*....|....*....|....*..
gi 1622930354 682 KNAARDSWQKKVEDLLNQISLLKQNLE 708
Cdd:TIGR02169 938 DPKGEDEEIPEEELSLEDVQAELQRVE 964
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
198-546 |
5.52e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 5.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 198 RREIQELLKSQQDHSASVNKGQEKAEELhRMEVESLNKMLEELRleqkKLIEDYEGKLNKAQSFYERELdtlKRSQLFTA 277
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEKALAEL-RKELEELEEELEQLR----KELEELSRQISALRKDLARLE---AEVEQLEE 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 278 ESLQASKEkeadlRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMAL 357
Cdd:TIGR02168 748 RIAQLSKE-----LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 358 LSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATqmtqevtIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEE 437
Cdd:TIGR02168 823 RERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE-------IEELEELIEELESELEALLNERASLEEALALLRSE 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 438 QKQ---QILELEKKVSEAK------RTQQEYYERELKNLQNRLEEEVTQLNEAHSKTLEELAwKHHMAIEAVHSNAIRDK 508
Cdd:TIGR02168 896 LEElseELRELESKRSELRreleelREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAE-ALENKIEDDEEEARRRL 974
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1622930354 509 KKLQMELE-------------EQHNKEKLNLEEDKNQLQQELENLKEVLED 546
Cdd:TIGR02168 975 KRLENKIKelgpvnlaaieeyEELKERYDFLTAQKEDLTEAKETLEEAIEE 1025
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
44-680 |
7.03e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.52 E-value: 7.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 44 HLKMSKKIAQLTKVIYALNTKNDEHESAIQALKDAhEEEIQQILAETREKILQYKSKVTEELDLRRKIQVLEASLEDHIK 123
Cdd:TIGR02168 276 VSELEEEIEELQKELYALANEISRLEQQKQILRER-LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 124 MKQQALTEFEAYKHRVEDMQLCAEAQHVQ-----------------RIVTMSREVEEIRRKFEEKLRSFGQLQVQFEK-- 184
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETlrskvaqlelqiaslnnEIERLEARLERLEDRRERLQQEIEELLKKLEEae 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 185 ---------DKRLALEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELHRM--EVESLNKMLEELR---------LEQ 244
Cdd:TIGR02168 435 lkelqaeleELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLqaRLDSLERLQENLEgfsegvkalLKN 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 245 KKLIEDYEGKLNKAQSF---YERELDTL--KRSQLFTAESLQASKEKEADLRKEFQGQEAIL---RKTIGKLKTELQMVQ 316
Cdd:TIGR02168 515 QSGLSGILGVLSELISVdegYEAAIEAAlgGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLpldSIKGTEIQGNDREIL 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 317 DEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQ 396
Cdd:TIGR02168 595 KNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILE 674
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 397 MTQEvtIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYyeRELKNLQNRLEEEVT 476
Cdd:TIGR02168 675 RRRE--IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDL--ARLEAEVEQLEERIA 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 477 QLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMELE-EQHNKEKLNLEEDKNQLQQELENLKEVLEDKLNTANQ-- 553
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQiEQLKEELKALREALDELRAELTLLNEEAANLRERLESle 830
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 554 -EIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEDEKLK 632
Cdd:TIGR02168 831 rRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR 910
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 1622930354 633 VDkmahdleikwtenLRQECSKLREELRlQHEEDKKSAMSQLLQLKER 680
Cdd:TIGR02168 911 SE-------------LRRELEELREKLA-QLELRLEGLEVRIDNLQER 944
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
28-474 |
1.17e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 28 AAAQLAGHSMDYSQEMHLKMSKKIAQLTKVIYALNTKNDEHESAIQALKDAHEEEIQqilAETREKILQYKSKVTEeldL 107
Cdd:PTZ00121 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK---ADELKKAAAAKKKADE---A 1423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 108 RRKIQvlEASLEDHIKMKQQALTEFEAYKHRVEDMQlcaEAQHVQRIVTMSREVEEIRRKFEEKlRSFGQLQVQFEKDKR 187
Cdd:PTZ00121 1424 KKKAE--EKKKADEAKKKAEEAKKADEAKKKAEEAK---KAEEAKKKAEEAKKADEAKKKAEEA-KKADEAKKKAEEAKK 1497
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 188 LALEDLRTAH-RREIQELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFYEREL 266
Cdd:PTZ00121 1498 KADEAKKAAEaKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKN 1577
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 267 DTLKRsqlftAESLQASKEKEADLRKEFQGQEAILRKTIGKlKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQ 346
Cdd:PTZ00121 1578 MALRK-----AEEAKKAEEARIEEVMKLYEEEKKMKAEEAK-KAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 347 LDDAKEGEMALLSKHKEVESELAAARERLQQQASDlVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAF 426
Cdd:PTZ00121 1652 LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED-EKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKI 1730
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1622930354 427 LQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEE 474
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKE 1778
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
91-451 |
6.04e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 6.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 91 REKILQYKSKVTEELDLRRKIQVLEASLEDHIKMKQQALTEFEAYKHRVEDMQlcaeaqhvQRIVTMSREVEEIRRKFEE 170
Cdd:TIGR02169 663 RGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDAS--------RKIGEIEKEIEQLEQEEEK 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 171 KLRSFGQLQVQFEKdkrlaLEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELHRM-------EVESLNKMLEELRLE 243
Cdd:TIGR02169 735 LKERLEELEEDLSS-----LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARlshsripEIQAELSKLEEEVSR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 244 QKKLIEDYEGKLNKAQSFYE-------------RELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKT 310
Cdd:TIGR02169 810 IEARLREIEQKLNRLTLEKEylekeiqelqeqrIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKK 889
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 311 ELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESE---------LAAARERLQQQASD 381
Cdd:TIGR02169 890 ERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIpeeelsledVQAELQRVEEEIRA 969
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622930354 382 LvlkaSHIGMLqatqmtqevTIKDLESEKSRANE---RLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSE 451
Cdd:TIGR02169 970 L----EPVNML---------AIQEYEEVLKRLDElkeKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINE 1029
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
114-807 |
6.28e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 6.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 114 LEASLEDHIKMKQQALTEfEAYKHRVEDMQLCAEAQHVQRIVTMSREVEEIRRKFEeklrsfgqlqVQFEKDKRLALEDL 193
Cdd:PTZ00121 1084 KEDNRADEATEEAFGKAE-EAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAED----------ARKAEEARKAEDAK 1152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 194 RTAHRREIQELLKSQQDHSASVNKGQE---KAEELHRmeVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFYERELDTLK 270
Cdd:PTZ00121 1153 RVEIARKAEDARKAEEARKAEDAKKAEaarKAEEVRK--AEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVK 1230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 271 RSQLFTAESLQASKEKE----ADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQ 346
Cdd:PTZ00121 1231 KAEEAKKDAEEAKKAEEernnEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 347 LDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGM---LQATQMTQEVTIKDLESEKSRANERLSQLEEE 423
Cdd:PTZ00121 1311 AEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAadeAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 424 RAFLQSKTQSldEEQKQQILELEKKVSEAKRTQqeyyerELKnlqnRLEEEVTQLNEAHSKTLEElawkhhmaieavhsn 503
Cdd:PTZ00121 1391 KKADEAKKKA--EEDKKKADELKKAAAAKKKAD------EAK----KKAEEKKKADEAKKKAEEA--------------- 1443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 504 aiRDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENLKEvledklntanqEIGRLQDLVRKSEQGLGSAEGLiaslqdsq 583
Cdd:PTZ00121 1444 --KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE-----------EAKKADEAKKKAEEAKKKADEA-------- 1502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 584 eRLQTELDLTKDSLKETKDALLNVEGELEQERQQHEEtiaAMKEDEKLKVDkmahdlEIKWTENLRQECSKLREELRLQH 663
Cdd:PTZ00121 1503 -KKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADE---AKKAEEKKKAD------ELKKAEELKKAEEKKKAEEAKKA 1572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 664 EEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQH 743
Cdd:PTZ00121 1573 EEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEEL 1652
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622930354 744 QQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHSAELQSLKDAHRESMEGFRIEMEQELQ 807
Cdd:PTZ00121 1653 KKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKK 1716
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
48-779 |
9.25e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.97 E-value: 9.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 48 SKKIAQLTKVIYALNTKNDEHESAIQALKDAHEEEIQQILAETREKILQYKSKVTEELDLRRKIQVLEASLEDHIKMKQQ 127
Cdd:pfam02463 263 EEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 128 ALTEFEAYKHRVEDMQLCAEAQHVQRIVTMSREVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDLRTAHRREIQE-LLK 206
Cdd:pfam02463 343 ELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEdLLK 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 207 SQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRL------EQKKLIEDYEGKLNKAQSFYERELDTLKRSQLFTAESL 280
Cdd:pfam02463 423 EEKKEELEILEEEEESIELKQGKLTEEKEELEKQELkllkdeLELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKE 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 281 QASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQD---------------EAGSLLDKCQKLQTALATAENNVQGLQK 345
Cdd:pfam02463 503 SKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVEnykvaistavivevsATADEVEERQKLVRALTELPLGARKLRL 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 346 QLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERA 425
Cdd:pfam02463 583 LIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKS 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 426 FLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEEVTQLNEAHSKTLEELAWKHHMAIEAVHSNAI 505
Cdd:pfam02463 663 EVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLK 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 506 RDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENLKEVLEDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQER 585
Cdd:pfam02463 743 QKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQL 822
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 586 LQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEDEKLKVDKMAHDLEIKWTENLRQECSKLREELRLQHEE 665
Cdd:pfam02463 823 LIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKEL 902
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 666 DKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQI--SLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQH 743
Cdd:pfam02463 903 EEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPeeLLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEE 982
|
730 740 750
....*....|....*....|....*....|....*.
gi 1622930354 744 QQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQK 779
Cdd:pfam02463 983 FEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQR 1018
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
236-881 |
1.57e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 236 MLEELRLEQK--KLIEDYEgKLNKAqsfyERELDTLKRsQLFTAESLQASKEKEADLRKEFQGQEAIL--------RKTI 305
Cdd:COG4913 217 MLEEPDTFEAadALVEHFD-DLERA----HEALEDARE-QIELLEPIRELAERYAAARERLAELEYLRaalrlwfaQRRL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 306 GKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLskhkevESELAAARERLQQQASDLvlk 385
Cdd:COG4913 291 ELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQL------EREIERLERELEERERRR--- 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 386 ASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAflqsktqSLDEEQKQQILELEKKVSEAKRTQQEYyeRELK 465
Cdd:COG4913 362 ARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELE-------ALEEALAEAEAALRDLRRELRELEAEI--ASLE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 466 NLQNRLEEEVTQLNEAHSKTL------------------EELAWkhHMAIEAV-HS-------------------NAIRD 507
Cdd:COG4913 433 RRKSNIPARLLALRDALAEALgldeaelpfvgelievrpEEERW--RGAIERVlGGfaltllvppehyaaalrwvNRLHL 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 508 KKKLQMELEEQHNKEKLNLEEDKNQLQQELenlkEVLEDKL-NTANQEIGRLQDLV-----------RKS--EQGLGSAE 573
Cdd:COG4913 511 RGRLVYERVRTGLPDPERPRLDPDSLAGKL----DFKPHPFrAWLEAELGRRFDYVcvdspeelrrhPRAitRAGQVKGN 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 574 GLIASLQDSQ----------------ERLQTELDLTKDSLKETKDALLNVEGELE--QERQQHEETIAAMKEDEklkVDK 635
Cdd:COG4913 587 GTRHEKDDRRrirsryvlgfdnraklAALEAELAELEEELAEAEERLEALEAELDalQERREALQRLAEYSWDE---IDV 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 636 MAHDLEIkwtENLRQEcsklREELRlqheedkkSAMSQLLQLKER--EKNAARDSWQKKVEDLLNQISLLKQNLEiqlsq 713
Cdd:COG4913 664 ASAEREI---AELEAE----LERLD--------ASSDDLAALEEQleELEAELEELEEELDELKGEIGRLEKELE----- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 714 sqtslqqlqaQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLafQTMEEEKEKEQRALENHLQQKHSAELQSLKDAHRE 793
Cdd:COG4913 724 ----------QAEEELDELQDRLEAAEDLARLELRALLEERFA--AALGDAVERELRENLEERIDALRARLNRAEEELER 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 794 SMEGFRIEMEQELQTLRFELEDEGK--AMLASLRSE-LNHQHAAAIDLLRHNHHQELAAAKMELERSIDISRRqskehmc 870
Cdd:COG4913 792 AMRAFNREWPAETADLDADLESLPEylALLDRLEEDgLPEYEERFKELLNENSIEFVADLLSKLRRAIREIKE------- 864
|
730
....*....|.
gi 1622930354 871 RITDLQEELRH 881
Cdd:COG4913 865 RIDPLNDSLKR 875
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
47-589 |
1.82e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.96 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 47 MSKKIAQLTKVIYALNTKNDEHESAIQALKDAHEEEIQQILAETREKILQYKSKVTEEL--------DLRRKIQVLEASL 118
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEItgltekasSARSQANSIQSQL 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 119 EdhiKMKQQALTEFEAYKHRVEDM-----QLCAEAQHVQR------------IVTMSREVEEIRRKFEEKLRSFGQLQVQ 181
Cdd:pfam15921 302 E---IIQEQARNQNSMYMRQLSDLestvsQLRSELREAKRmyedkieelekqLVLANSELTEARTERDQFSQESGNLDDQ 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 182 FEKdkrlALEDLrtaHRREIQ-ELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQS 260
Cdd:pfam15921 379 LQK----LLADL---HKREKElSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMA 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 261 FYERELDTLKRSQLFTAE--------------------SLQASKEKEADLRKEFQGQEAILRKT---IGKLKT------- 310
Cdd:pfam15921 452 AIQGKNESLEKVSSLTAQlestkemlrkvveeltakkmTLESSERTVSDLTASLQEKERAIEATnaeITKLRSrvdlklq 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 311 ELQMVQDEAGSLLD---KCQKLQTALATAENNVQGLQKQLddakEGEMALLSKHKEVESELAAARERLQQQASDLVLKAS 387
Cdd:pfam15921 532 ELQHLKNEGDHLRNvqtECEALKLQMAEKDKVIEILRQQI----ENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQ 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 388 HIGMLQATQMTQ----EVTIKDLESEKSR----ANERL----------SQLEEERAFLQSKTQSLDEEQKQQILELEKKv 449
Cdd:pfam15921 608 EFKILKDKKDAKirelEARVSDLELEKVKlvnaGSERLravkdikqerDQLLNEVKTSRNELNSLSEDYEVLKRNFRNK- 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 450 SEAKRTQQEYYERELKNLQNRLEEEVTQL-----NEAHSKTLeELAWKHHMAIEAVHSNAIRDKKKLQMELEEQHNKEKL 524
Cdd:pfam15921 687 SEEMETTTNKLKMQLKSAQSELEQTRNTLksmegSDGHAMKV-AMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKH 765
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622930354 525 NLEEDKNQLQQELENL---KEVLEDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTE 589
Cdd:pfam15921 766 FLKEEKNKLSQELSTVateKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQE 833
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
512-708 |
2.21e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 512 QMELEEQHNKEKLNLEEDKNQLQQELENLK---EVLEDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQT 588
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKkeeKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 589 ELDLTKDSLKETKDA------------LLNVEGELEQER---------QQHEETIAAMKED-EKLKVDKMAHDLEIKWTE 646
Cdd:COG4942 98 ELEAQKEELAELLRAlyrlgrqpplalLLSPEDFLDAVRrlqylkylaPARREQAEELRADlAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622930354 647 NLRQEcsKLREELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQISLLKQNLE 708
Cdd:COG4942 178 ALLAE--LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
52-522 |
2.21e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 52 AQLTKVIYALNTKNDEHE--SAIQALKDAHEEEIQQILAETREKILQYKSKvteeldlRRKIQVLEASLEDHIKMKQQAL 129
Cdd:pfam15921 444 GQMERQMAAIQGKNESLEkvSSLTAQLESTKEMLRKVVEELTAKKMTLESS-------ERTVSDLTASLQEKERAIEATN 516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 130 TEFEAYKHRV-----EDMQLCAEAQHVQRIVTmsrEVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDLRTAHRREIQEL 204
Cdd:pfam15921 517 AEITKLRSRVdlklqELQHLKNEGDHLRNVQT---ECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKA 593
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 205 LKSQQDHSASVNKGQEKA-EELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFyERELDTLKRSQLFTAESLQAS 283
Cdd:pfam15921 594 QLEKEINDRRLELQEFKIlKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDI-KQERDQLLNEVKTSRNELNSL 672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 284 KEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLdDAKEGEM-ALLSKHK 362
Cdd:pfam15921 673 SEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQI-TAKRGQIdALQSKIQ 751
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 363 EVESELAAARER---LQQQASDLVLKASHIGMlQATQMTQEVTIkdLESEKSRANERLSQLEE--ERAFLQ-SKTQSLDE 436
Cdd:pfam15921 752 FLEEAMTNANKEkhfLKEEKNKLSQELSTVAT-EKNKMAGELEV--LRSQERRLKEKVANMEValDKASLQfAECQDIIQ 828
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 437 EQKQQILELE-KKVSEAKRTQQEYYERElKNLQNRLEEEV----TQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKL 511
Cdd:pfam15921 829 RQEQESVRLKlQHTLDVKELQGPGYTSN-SSMKPRLLQPAsftrTHSNVPSSQSTASFLSHHSRKTNALKEDPTRDLKQL 907
|
490
....*....|.
gi 1622930354 512 QMELEEQHNKE 522
Cdd:pfam15921 908 LQELRSVINEE 918
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
274-485 |
2.30e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 274 LFTAESLQASKEKEADLRKEFQGqeaiLRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEG 353
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQ----LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 354 EMALLSKHKEVESELAAARERLQQQ---------------------ASDLVLKASHIGMLQATQMTQ----EVTIKDLES 408
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAELlralyrlgrqpplalllspedFLDAVRRLQYLKYLAPARREQaeelRADLAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622930354 409 EKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYE--RELKNLQNRLEEEVTQLNEAHSKT 485
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAElqQEAEELEALIARLEAEAAAAAERT 243
|
|
| Nup88 |
pfam10168 |
Nuclear pore component; Nup88 can be divided into two structural domains; the N-terminal ... |
472-657 |
3.96e-05 |
|
Nuclear pore component; Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein has no obvious structural motifs but is the region for binding to Nup98, one of the components of the nuclear pore. the C-terminal end is a predicted coiled-coil domain. Nup88 is overexpressed in tumour cells.
Pssm-ID: 462975 [Multi-domain] Cd Length: 713 Bit Score: 47.73 E-value: 3.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 472 EEEVTQLNEAHSKTLEELAWKHHMAIEAV--HSNAIRDKKKLQmeLEEQHNkeklnLEEDKNQLQQELENLKEVLEDKLN 549
Cdd:pfam10168 531 QECLQLLSRATQVFREEYLKKHDLAREEIqkRVKLLKLQKEQQ--LQELQS-----LEEERKSLSERAEKLAEKYEEIKD 603
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 550 taNQEigrlqDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQheetIAAMKEDE 629
Cdd:pfam10168 604 --KQE-----KLMRRCKKVLQRLNSQLPVLSDAEREMKKELETINEQLKHLANAIKQAKKKMNYQRYQ----IAKSQSIR 672
|
170 180
....*....|....*....|....*...
gi 1622930354 630 KLKVDKMAHDLEIKWTENLRQECSKLRE 657
Cdd:pfam10168 673 KKSSLSLSEKQRKTIKEILKQLGSEIDE 700
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
340-660 |
4.35e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 4.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 340 VQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTIKDLEseksranERLSQ 419
Cdd:TIGR02169 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELE-------EDLSS 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 420 LEEERAFLQSKTQSLDEEQKQQILELEKkvseakrtqqeyYERELKNLQNRLEEEVTQLNEAHSKTLEElawkHHMAIEA 499
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDLHK------------LEEALNDLEARLSHSRIPEIQAELSKLEE----EVSRIEA 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 500 VHSNAIRDKKKLQMELEeqhnkeklnLEEDKnqlQQELENLKEVLEDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASL 579
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKE---------YLEKE---IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL 880
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 580 QDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQ---QHEETIAAMKEDEKLKVDKMAHDLEIKWT----ENLRQEC 652
Cdd:TIGR02169 881 ESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKrlsELKAKLEALEEELSEIEDPKGEDEEIPEEelslEDVQAEL 960
|
....*...
gi 1622930354 653 SKLREELR 660
Cdd:TIGR02169 961 QRVEEEIR 968
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
227-480 |
7.99e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.83 E-value: 7.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 227 RMEVESLNKMlEELRLEQKKLIEDyegkLNKAQSF------YERELDTLKRsQLFTA-ESLQASKEKEADLRKEfqgQEA 299
Cdd:PRK11281 42 QAQLDALNKQ-KLLEAEDKLVQQD----LEQTLALldkidrQKEETEQLKQ-QLAQApAKLRQAQAELEALKDD---NDE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 300 ILRKTIGKLK-TELQMVQDEagsLLDKCQKLQTALATAENNVQGLQKQLDDAkegemallskhkevESELAAARERLQQ- 377
Cdd:PRK11281 113 ETRETLSTLSlRQLESRLAQ---TLDQLQNAQNDLAEYNSQLVSLQTQPERA--------------QAALYANSQRLQQi 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 378 -------QASDLVLKASHIGMLQATQ-------------MTQEVTIKDL-ESEKSRANERLSQLEEERAFLQ----SKTQ 432
Cdd:PRK11281 176 rnllkggKVGGKALRPSQRVLLQAEQallnaqndlqrksLEGNTQLQDLlQKQRDYLTARIQRLEHQLQLLQeainSKRL 255
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1622930354 433 SLDEEQKQQILELEKKvseAKRTQQEYYEREL-KNLQ--NRLEEEVTQLNE 480
Cdd:PRK11281 256 TLSEKTVQEAQSQDEA---ARIQANPLVAQELeINLQlsQRLLKATEKLNT 303
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
183-987 |
8.30e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 8.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 183 EKDKRLALEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQSFY 262
Cdd:pfam02463 181 ETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEI 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 263 ERELDTLKRSQLFTAESLQASKEKEaDLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQG 342
Cdd:pfam02463 261 EKEEEKLAQVLKENKEEEKEKKLQE-EELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEE 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 343 LQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEE 422
Cdd:pfam02463 340 LEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLED 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 423 ERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQ-------NRLEEEVTQLNEAHSKTLEE------- 488
Cdd:pfam02463 420 LLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELelkksedLLKETQLVKLQEQLELLLSRqkleers 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 489 LAWKHHMAIEAVHSNAIRDKKKLQMELEEQHNKEKLNLEED---KNQLQQELENLKEVLEDKLNTANQEIGRLQDLVRKS 565
Cdd:pfam02463 500 QKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENykvAISTAVIVEVSATADEVEERQKLVRALTELPLGARK 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 566 EQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEDEKLKVDKMAHDLEIKWT 645
Cdd:pfam02463 580 LRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLA 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 646 ENLRQECSKLREELRLQHEEDKKSAMSQLLqlkEREKNAARDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQLQAQF 725
Cdd:pfam02463 660 EKSEVKASLSELTKELLEIQELQEKAESEL---AKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINE 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 726 TQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHSAElqslkdahresmegFRIEMEQE 805
Cdd:pfam02463 737 ELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEE--------------KLKAQEEE 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 806 LQTLRFELEDEGKAMLASLRSELnhQHAAAIDLLRHNHHQELAAAKMELERSIDISRRQSKEHMCRITDLQEELRHREHH 885
Cdd:pfam02463 803 LRALEEELKEEAELLEEEQLLIE--QEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELE 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 886 ISELDKEVQHLHENISALTKELEFKGKEILRIRSESNqQIRLHEQDLNKRLEKELDVMTADHLREKNIMRADFNKTNELL 965
Cdd:pfam02463 881 EQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKEN-EIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEE 959
|
810 820
....*....|....*....|..
gi 1622930354 966 KEINAALQVSLEEMEEKYLMRE 987
Cdd:pfam02463 960 ERNKRLLLAKEELGKVNLMAIE 981
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
159-671 |
8.80e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.60 E-value: 8.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 159 REVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEdlRTAHRREIQELLKSQQDHSASVNKGQEKAEELHRmEVESLNKMLE 238
Cdd:PRK03918 217 PELREELEKLEKEVKELEELKEEIEELEKELES--LEGSKRKLEEKIRELEERIEELKKEIEELEEKVK-ELKELKEKAE 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 239 ELRlEQKKLIEDYEGKLNKAqsfyERELDTLKRSQLFTAESLQASKEKEADLrKEFQGQEAILRKTIGKLKTELQMVQdE 318
Cdd:PRK03918 294 EYI-KLSEFYEEYLDELREI----EKRLSRLEEEINGIEERIKELEEKEERL-EELKKKLKELEKRLEELEERHELYE-E 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 319 AGSLLDKCQKLQTALAtaENNVQGLQKQLDDAKEgemallsKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMT 398
Cdd:PRK03918 367 AKAKKEELERLKKRLT--GLTPEKLEKELEELEK-------AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGK 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 399 QEVTIKDLESE-----KSRANERLSQLEEERAFLQSKTQSLDEEQKqqilELEKKVSEAKR-TQQEYYERELKNLQNRLE 472
Cdd:PRK03918 438 CPVCGRELTEEhrkelLEEYTAELKRIEKELKEIEEKERKLRKELR----ELEKVLKKESElIKLKELAEQLKELEEKLK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 473 ----EEVTQLNEAHSKTLEELAwkhhmAIEAVHSNAIRDKKKLqmeleEQHNKEKLNLEEDKNQLQQELENLKEVLEDK- 547
Cdd:PRK03918 514 kynlEELEKKAEEYEKLKEKLI-----KLKGEIKSLKKELEKL-----EELKKKLAELEKKLDELEEELAELLKELEELg 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 548 ---LNTANQEIGRLQDLVRKSEQgLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAA 624
Cdd:PRK03918 584 fesVEELEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYE 662
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 1622930354 625 MKEDEKLKVDKMAHDL--EIKWTENLRQECSKLREELRLQHEEDKKSAM 671
Cdd:PRK03918 663 ELREEYLELSRELAGLraELEELEKRREEIKKTLEKLKEELEEREKAKK 711
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
327-705 |
1.08e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.48 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 327 QKLQTALATAENNVQGLQKQLDDAKEGEMALlskhkevESELAAARERLQ------QQASDLVLKASHIGMLQATQMTQE 400
Cdd:COG3096 295 FGARRQLAEEQYRLVEMARELEELSARESDL-------EQDYQAASDHLNlvqtalRQQEKIERYQEDLEELTERLEEQE 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 401 VTIKDLESEKSRANERLSQLEEERAFLQSK----TQSLDEEQK-----QQILE-LEKKvseakRTQQEYYERELKNLQNR 470
Cdd:COG3096 368 EVVEEAAEQLAEAEARLEAAEEEVDSLKSQladyQQALDVQQTraiqyQQAVQaLEKA-----RALCGLPDLTPENAEDY 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 471 LEEEVTQLNEAHSKTLEElawKHHMAIEAVHSNAIRDKKKL------QMELEEQHNKEKLNLE---EDKNQLQQElenlk 541
Cdd:COG3096 443 LAAFRAKEQQATEEVLEL---EQKLSVADAARRQFEKAYELvckiagEVERSQAWQTARELLRryrSQQALAQRL----- 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 542 EVLEDKLNTANQEIGRLQDLVRKSEQgLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEET 621
Cdd:COG3096 515 QQLRAQLAELEQRLRQQQNAERLLEE-FCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 622 IAAMKedeklkvdkmahDLEIKWTEnLRQECSKLREEL--RLQHEEDKKSAMSQLLQlKEREKNAARDSWQKKVEDLLNQ 699
Cdd:COG3096 594 IKELA------------ARAPAWLA-AQDALERLREQSgeALADSQEVTAAMQQLLE-REREATVERDELAARKQALESQ 659
|
....*.
gi 1622930354 700 ISLLKQ 705
Cdd:COG3096 660 IERLSQ 665
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
324-567 |
1.54e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 324 DKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQqasdlvlkashigmLQATQMTQEVTI 403
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA--------------LEQELAALEAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 404 KDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQeYYERELKNLQNRLEEevtqlneaHS 483
Cdd:COG4942 86 AELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQ-YLKYLAPARREQAEE--------LR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 484 KTLEELAwkhhmAIEAVHSNAIRDKKKLQMELEEQHnKEKLNLEEDKNQLQQELENLKEVLEDKLNTANQEIGRLQDLVR 563
Cdd:COG4942 157 ADLAELA-----ALRAELEAERAELEALLAELEEER-AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
....
gi 1622930354 564 KSEQ 567
Cdd:COG4942 231 RLEA 234
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
185-659 |
1.99e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.42 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 185 DKRLALEDLRTaHRREIQELLKSQ------QDHSASVNKGQEKAEELhRMEVESLNKMLE---ELRLEQKKLIEDYEGKL 255
Cdd:PRK02224 173 DARLGVERVLS-DQRGSLDQLKAQieekeeKDLHERLNGLESELAEL-DEEIERYEEQREqarETRDEADEVLEEHEERR 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 256 nkaqsfyeRELDTLKRsqlfTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAG--------------- 320
Cdd:PRK02224 251 --------EELETLEA----EIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGlddadaeavearree 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 321 ------SLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQA 394
Cdd:PRK02224 319 ledrdeELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 395 TQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDE--EQKQQILELEK--------------KVSEAKRTQQE 458
Cdd:PRK02224 399 RFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARErvEEAEALLEAGKcpecgqpvegsphvETIEEDRERVE 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 459 YYERELKNL---QNRLEEEVTQLNEAHS------------KTLEELAWKHHMAIEAvHSNAIRDKKKLQMELEEQHNKEK 523
Cdd:PRK02224 479 ELEAELEDLeeeVEEVEERLERAEDLVEaedrierleerrEDLEELIAERRETIEE-KRERAEELRERAAELEAEAEEKR 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 524 LNLEEDKNQLQQELENLKEvLEDKLNTANQEIGRLQDlVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDA 603
Cdd:PRK02224 558 EAAAEAEEEAEEAREEVAE-LNSKLAELKERIESLER-IRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRER 635
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622930354 604 LLNVEGELE--------QERQQHEETIAAMKED-EKLKVDKMAHDLEIKWTENLRQECSKLREEL 659
Cdd:PRK02224 636 KRELEAEFDearieearEDKERAEEYLEQVEEKlDELREERDDLQAEIGAVENELEELEELRERR 700
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
198-618 |
2.18e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 198 RREIQELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLEQKKLIEDYEGKLNKAQ---SFYERELDTLKRSQL 274
Cdd:COG4717 77 EEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEaelAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 275 FTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGE 354
Cdd:COG4717 157 ELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 355 MALLSKHK----EVESELAAARERLQQQASDLVLKASHIG----------MLQATQMTQEVTIKDLESEKSRANERLSQL 420
Cdd:COG4717 237 EAAALEERlkeaRLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlgllALLFLLLAREKASLGKEAEELQALPALEEL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 421 EEERAFLQSKTQSLDEE-QKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEEVTQL-NEAHSKTLEELAWKHHMAIE 498
Cdd:COG4717 317 EEEELEELLAALGLPPDlSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALlAEAGVEDEEELRAALEQAEE 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 499 AVhsNAIRDKKKLQMELEEQHNKEKLNLE-EDKNQLQQELENLK---EVLEDKLNTANQEIGRLQDLVRKSEQGlGSAEG 574
Cdd:COG4717 397 YQ--ELKEELEELEEQLEELLGELEELLEaLDEEELEEELEELEeelEELEEELEELREELAELEAELEQLEED-GELAE 473
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1622930354 575 LIASLQDSQERLQtELDLTKDSLKETKDALLNVEGELEQERQQH 618
Cdd:COG4717 474 LLQELEELKAELR-ELAEEWAALKLALELLEEAREEYREERLPP 516
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
231-933 |
2.18e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 231 ESLNKMLEELRLEqkklIEDYEGKLNKAQSFYERELDTLKRSQL---FTAESLQASKEKEADLRK-EFQGQEAI---LRK 303
Cdd:pfam15921 74 EHIERVLEEYSHQ----VKDLQRRLNESNELHEKQKFYLRQSVIdlqTKLQEMQMERDAMADIRRrESQSQEDLrnqLQN 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 304 TIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKH-------------------KEV 364
Cdd:pfam15921 150 TVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHdsmstmhfrslgsaiskilREL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 365 ESELAAARERL------------QQQASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQ 432
Cdd:pfam15921 230 DTEISYLKGRIfpvedqlealksESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQAR 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 433 SLDEEQKQQILELEKKVSEAKRTQQEyyerELKNLQNRLEEEVTQLNEAHSKTLEELAWKHHMAIEAVHSNairdkKKLQ 512
Cdd:pfam15921 310 NQNSMYMRQLSDLESTVSQLRSELRE----AKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLD-----DQLQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 513 MELEEQHNKEK-LNLEEDKNQLQQELENLKEV----LEDKLNTANQEIGRLQDLVRK-SEQGLGSAEGLIASLQDSQERL 586
Cdd:pfam15921 381 KLLADLHKREKeLSLEKEQNKRLWDRDTGNSItidhLRRELDDRNMEVQRLEALLKAmKSECQGQMERQMAAIQGKNESL 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 587 Q------TELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEDEKL------KVDKMAH--DLEIKWTENLRQEC 652
Cdd:pfam15921 461 EkvssltAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAieatnaEITKLRSrvDLKLQELQHLKNEG 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 653 SKLR------EELRLQHEEDKK---------SAMSQLLQLKEREKNAARDSwQKKVEDLLNQISLLKQNLEIQLSQSQTS 717
Cdd:pfam15921 541 DHLRnvqtecEALKLQMAEKDKvieilrqqiENMTQLVGQHGRTAGAMQVE-KAQLEKEINDRRLELQEFKILKDKKDAK 619
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 718 LQQLQAQFTQerqrLTQELEELEEQHQQRHKSLKEAhvlafqtmeeekEKEQRALENHLQQKHSaELQSLKDAHRESMEG 797
Cdd:pfam15921 620 IRELEARVSD----LELEKVKLVNAGSERLRAVKDI------------KQERDQLLNEVKTSRN-ELNSLSEDYEVLKRN 682
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 798 FRIEMEqELQTLRFELedegKAMLASLRSELNHQHAAAIDLLRHNHHQELAAakMELERSIDISRRQskehmcrITDLQE 877
Cdd:pfam15921 683 FRNKSE-EMETTTNKL----KMQLKSAQSELEQTRNTLKSMEGSDGHAMKVA--MGMQKQITAKRGQ-------IDALQS 748
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 878 ELRHREHHISELDKEVQHLHENISALTKELEFKGKEILRIRSE----SNQQIRLHEQDLN 933
Cdd:pfam15921 749 KIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGElevlRSQERRLKEKVAN 808
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
359-591 |
3.30e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 3.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 359 SKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQ 438
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 439 KQQILELEKKVSEAKRTQQEYYERELKNLQN-----RLEEEVTQLNEAHSKTLEELAwkhhmaieavhsnaiRDKKKLQm 513
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDfldavRRLQYLKYLAPARREQAEELR---------------ADLAELA- 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622930354 514 ELEEQHNKEKLNLEEDKNQLQQELENLKEVLEDKlntanqeigrlQDLVRKSEQGLGSAEGLIASLQDSQERLQTELD 591
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAER-----------QKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
234-1013 |
7.62e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 7.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 234 NKMLEELRLEQKKLIED------YEGKLNKAQSFYERELDTLKRSQLFTAESLQASK--EKEADLRKEFQGQEAILRKTI 305
Cdd:TIGR02169 145 TDFISMSPVERRKIIDEiagvaeFDRKKEKALEELEEVEENIERLDLIIDEKRQQLErlRREREKAERYQALLKEKREYE 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 306 GKLktelqmvqdeagsLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLK 385
Cdd:TIGR02169 225 GYE-------------LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 386 -ASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYErel 464
Cdd:TIGR02169 292 vKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELED--- 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 465 knLQNRLEEEVTQLNEAHSKT------LEELAWKHHmAIEAVHSNAIRDKKKLQMELEEQHNKEKlNLEEDKNQLQQELE 538
Cdd:TIGR02169 369 --LRAELEEVDKEFAETRDELkdyrekLEKLKREIN-ELKRELDRLQEELQRLSEELADLNAAIA-GIEAKINELEEEKE 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 539 NLKEVLE----------DKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVE 608
Cdd:TIGR02169 445 DKALEIKkqewkleqlaADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVH 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 609 GELEQERQQHEETIAAMK------------EDEKLKVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQ 676
Cdd:TIGR02169 525 GTVAQLGSVGERYATAIEvaagnrlnnvvvEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVD 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 677 LKEREKNAARDSWQ-----------KKVEDLLNQISLLKQNLEIQL--------SQSQTSLQQLQAQFTQERQRLTQELE 737
Cdd:TIGR02169 605 LVEFDPKYEPAFKYvfgdtlvvediEAARRLMGKYRMVTLEGELFEksgamtggSRAPRGGILFSRSEPAELQRLRERLE 684
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 738 ELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALE-----NHLQQKHSAELQSLKDAHR--ESMEGFRIEMEQELQTLR 810
Cdd:TIGR02169 685 GLKRELSSLQSELRRIENRLDELSQELSDASRKIGEiekeiEQLEQEEEKLKERLEELEEdlSSLEQEIENVKSELKELE 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 811 FELEDEgKAMLASLRSELNhqhaaaiDLLRHNHHQELAAAKMELERSIDISRRQSKehmcRITDLQEELRHREHHISELD 890
Cdd:TIGR02169 765 ARIEEL-EEDLHKLEEALN-------DLEARLSHSRIPEIQAELSKLEEEVSRIEA----RLREIEQKLNRLTLEKEYLE 832
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 891 KEVQHLHENISALTKELEFKGKEI--LRIRSESNQQIRLHEQDLNKRLEKELDVMTADHLREKNIMR----------ADF 958
Cdd:TIGR02169 833 KEIQELQEQRIDLKEQIKSIEKEIenLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRelerkieeleAQI 912
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622930354 959 NKTNELLKEINAALQVSLEEM---EEKYLMRESKPEDIQMITELKAMLTERDQIIKKL 1013
Cdd:TIGR02169 913 EKKRKRLSELKAKLEALEEELseiEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRAL 970
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
213-454 |
1.30e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 213 ASVNKGQEKAEELHRM--EVESLNKMLEELRLEQKKLIEDYEgKLNKAQSFYERELDTLKRSQLFTAESLQASKEKEADL 290
Cdd:COG4942 17 AQADAAAEAEAELEQLqqEIAELEKELAALKKEEKALLKQLA-ALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 291 RKEFQGQEAILRKTIGKLkteLQMVQDEAGSLLDKCQKLQTALATAEnnvqgLQKQLDDAKEGEMALLSKHKEvesELAA 370
Cdd:COG4942 96 RAELEAQKEELAELLRAL---YRLGRQPPLALLLSPEDFLDAVRRLQ-----YLKYLAPARREQAEELRADLA---ELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 371 ARERLQQQASDLvlkashigmlQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQ---QILELEK 447
Cdd:COG4942 165 LRAELEAERAEL----------EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEEleaLIARLEA 234
|
....*..
gi 1622930354 448 KVSEAKR 454
Cdd:COG4942 235 EAAAAAE 241
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
354-566 |
1.43e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 354 EMALLSKHKEVESELAAARE-RLQQQASDLVLKASHIGMLQ---ATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQS 429
Cdd:pfam17380 384 QMERQQKNERVRQELEAARKvKILEEERQRKIQQQKVEMEQiraEQEEARQREVRRLEEERAREMERVRLEEQERQQQVE 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 430 KTQSLDEEQKQQILELEKKvseaKRTQQEYYERELKNLQNRLEEEVTQLNEAHSKtleelawkhhmaieavhsnairdKK 509
Cdd:pfam17380 464 RLRQQEEERKRKKLELEKE----KRDRKRAEEQRRKILEKELEERKQAMIEEERK-----------------------RK 516
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622930354 510 KLQMELEEQHN----KEKLNLEEDKNQLQQELENLKEVlEDKLNTANQEIGRLQDLVRKSE 566
Cdd:pfam17380 517 LLEKEMEERQKaiyeEERRREAEEERRKQQEMEERRRI-QEQMRKATEERSRLEAMERERE 576
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
238-938 |
1.47e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 238 EELRLEQKKLIEDYEGKLNKAQSFYERELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKT--ELQMV 315
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAqeEQLKK 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 316 QDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKegeMALLSKH-KEVESELAAARERLQQQASDLVLKASHIGMLQA 394
Cdd:TIGR00618 259 QQLLKQLRARIEELRAQEAVLEETQERINRARKAAP---LAAHIKAvTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVK 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 395 TQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQ-----KQQILELEKKVSEAKRTQQEYYERELKNLQN 469
Cdd:TIGR00618 336 QQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQhihtlQQQKTTLTQKLQSLCKELDILQREQATIDTR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 470 RLEEEVTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMELEE--QHNKEKLNLEEDKNQLQQELENLKEVLEDK 547
Cdd:TIGR00618 416 TSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQEsaQSLKEREQQLQTKEQIHLQETRKKAVVLAR 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 548 LntanQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEETIAAMKE 627
Cdd:TIGR00618 496 L----LELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQS 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 628 DEKLKVDKMAHDLEIkwtENLRQECSKLREELRLQHEEDKKSAMSQLLQLKEREKNAArdswqkkvedlLNQISLLKQNL 707
Cdd:TIGR00618 572 FSILTQCDNRSKEDI---PNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQD-----------LQDVRLHLQQC 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 708 EIQLSQSQTSLQQLQAQFTQERQRLtqeleeleeqhqqrhkslkeaHVLAFQTMEEEKEKEQRALENHLQQKhsaelqsl 787
Cdd:TIGR00618 638 SQELALKLTALHALQLTLTQERVRE---------------------HALSIRVLPKELLASRQLALQKMQSE-------- 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 788 kdahRESMEGFRIEMEQELQTLRFELEDEGKamlaslrselNHQHAAAIDLLRHNHHQELAAAKMELERSIDISRRQSKE 867
Cdd:TIGR00618 689 ----KEQLTYWKEMLAQCQTLLRELETHIEE----------YDREFNEIENASSSLGSDLAAREDALNQSLKELMHQART 754
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622930354 868 HMCRITDLQEELRHREHHISELDKEVQHLHENISALTKELEFKGKEILRIRSESNQQIRLHEQDLNKRLEK 938
Cdd:TIGR00618 755 VLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCET 825
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
305-620 |
2.67e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 305 IGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKegemallSKHKEVESELAAARERLQQQASDLVL 384
Cdd:COG4372 26 IAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQAR-------SELEQLEEELEELNEQLQAAQAELAQ 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 385 KASHIGMLQATQMTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYEREL 464
Cdd:COG4372 99 AQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSE 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 465 KNLQNRLEEEVTQLNEAhSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMELEEQHNKEKLNLEEDKNQLQQELENLKEVL 544
Cdd:COG4372 179 AEAEQALDELLKEANRN-AEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVIL 257
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622930354 545 EDKLNTANQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHEE 620
Cdd:COG4372 258 KEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALA 333
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
81-506 |
6.28e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.52 E-value: 6.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 81 EEIQQILAETREKILQYKSKVTEELDLRRKIQVLEASLEDHIKMKQQALTEFEAYKHRVEDMQLCAEAQHVQRIVTMSRE 160
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 161 VEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELhRMEVESLNKMLEEl 240
Cdd:COG4717 154 RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEA-QEELEELEEELEQ- 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 241 rLEQKKLIEDYEGKLNKAQSFYerELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAG 320
Cdd:COG4717 232 -LENELEAAALEERLKEARLLL--LIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 321 SLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKAshigMLQATQMTQE 400
Cdd:COG4717 309 ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAA----LLAEAGVEDE 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 401 VTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYERELKNLQNRLEEEVTQLNE 480
Cdd:COG4717 385 EELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQ 464
|
410 420
....*....|....*....|....*..
gi 1622930354 481 A-HSKTLEELAWKHHMAIEAVHSNAIR 506
Cdd:COG4717 465 LeEDGELAELLQELEELKAELRELAEE 491
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
295-382 |
6.79e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 40.10 E-value: 6.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 295 QGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAENNVQGLQKQLDDAKEGEMALLSKH-KEVESELAAARE 373
Cdd:TIGR04320 253 PNSLAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATAQKELANAQAQALQTAQNNlATAQAALANAEA 332
|
....*....
gi 1622930354 374 RLQQQASDL 382
Cdd:TIGR04320 333 RLAKAKEAL 341
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
190-796 |
7.60e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.49 E-value: 7.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 190 LEDLRTAHRREIQELLKSQQDHSasvnkgqEKAEELHRMEVESLNKMLEELRLEQKKL---IEDYEGKLNKAQSFYEREL 266
Cdd:pfam15921 247 LEALKSESQNKIELLLQQHQDRI-------EQLISEHEVEITGLTEKASSARSQANSIqsqLEIIQEQARNQNSMYMRQL 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 267 DTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAEnnvqglqKQ 346
Cdd:pfam15921 320 SDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKRE-------KE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 347 LDDAKEGEMALLSKhkevESELAAARERLQQQASDLVLKASHIgmlqatqmtqEVTIKDLESEKSranerlSQLEEERAF 426
Cdd:pfam15921 393 LSLEKEQNKRLWDR----DTGNSITIDHLRRELDDRNMEVQRL----------EALLKAMKSECQ------GQMERQMAA 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 427 LQSKTQSLDE-----EQKQQILELEKKVSE---AKRTQQEYYERELKNLQNRLEEEvtqlneahsktleelawkhHMAIE 498
Cdd:pfam15921 453 IQGKNESLEKvssltAQLESTKEMLRKVVEeltAKKMTLESSERTVSDLTASLQEK-------------------ERAIE 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 499 AVHSNAIRDKKKLQMELEE-QHNKeklNLEEDKNQLQQELENLKEVLEDK---LNTANQEIGRLQDLVRKSEQGLGSAEG 574
Cdd:pfam15921 514 ATNAEITKLRSRVDLKLQElQHLK---NEGDHLRNVQTECEALKLQMAEKdkvIEILRQQIENMTQLVGQHGRTAGAMQV 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 575 LIASLQDSQERLQTELDLTKdSLKETKDALL--------NVEGELEQERQQHEETIAAMKeDEKLKVDKMAHDLEIKWTE 646
Cdd:pfam15921 591 EKAQLEKEINDRRLELQEFK-ILKDKKDAKIrelearvsDLELEKVKLVNAGSERLRAVK-DIKQERDQLLNEVKTSRNE 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 647 --NLRQECSKLREELRLQHEEDKKSAMSQLLQLKereknaardSWQKKVEDLLNQIsllkQNLEIQLSQSQTSLQQLQAQ 724
Cdd:pfam15921 669 lnSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLK---------SAQSELEQTRNTL----KSMEGSDGHAMKVAMGMQKQ 735
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622930354 725 FTQERQRLTQELEELEEQHQQRHKSLKEAHVLafqtmEEEKEKEQRALENHLQQKH--SAELQSLKDAHRESME 796
Cdd:pfam15921 736 ITAKRGQIDALQSKIQFLEEAMTNANKEKHFL-----KEEKNKLSQELSTVATEKNkmAGELEVLRSQERRLKE 804
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
243-461 |
8.34e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.81 E-value: 8.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 243 EQKKLIEDYEGKLNKAQSfyerELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQdEAGSL 322
Cdd:COG3883 27 ELQAELEAAQAELDALQA----ELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY-RSGGS 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 323 LDKCQKLQTA--LATAENNVQGLQKQLDDAKEgemaLLSKHKEVESELAAARERLQQQASDLVLK----ASHIGMLQATQ 396
Cdd:COG3883 102 VSYLDVLLGSesFSDFLDRLSALSKIADADAD----LLEELKADKAELEAKKAELEAKLAELEALkaelEAAKAELEAQQ 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622930354 397 MTQEVTIKDLESEKSRANERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYYE 461
Cdd:COG3883 178 AEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
98-619 |
9.26e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 39.88 E-value: 9.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 98 KSKVTEELDLRRKIQVLEASLEDHIKMKQQALTEFEAYKHrvedmqlcaEAQHVQRIVTMSREVEEIRRKFEEKLRsfgq 177
Cdd:PRK01156 193 KSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMD---------DYNNLKSALNELSSLEDMKNRYESEIK---- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 178 lqvqfEKDKRLALEDLRTAHRREIQELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLEQKKLiEDYEGKLNK 257
Cdd:PRK01156 260 -----TAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKY-HAIIKKLSV 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 258 AQSFYERELDTLKRsqlftaeslqasKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTALATAE 337
Cdd:PRK01156 334 LQKDYNDYIKKKSR------------YDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 338 NNVQGLQKQLDDAKegemallSKHKEVESELAAARERLQQQASDLVLKASHIGMLQAtQMTQEVTIKDLESEKSRA---- 413
Cdd:PRK01156 402 IDPDAIKKELNEIN-------VKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNG-QSVCPVCGTTLGEEKSNHiinh 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 414 -NERLSQLEEERAFLQSKTQSLDEEQKQQILELEKKVSEAKRTQQEYY----------------ERELKNLQNRLEEEVT 476
Cdd:PRK01156 474 yNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYnkiesaradledikikINELKDKHDKYEEIKN 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622930354 477 QLNEAHSKTLEE--------LAWKHHMAIEAVHSNAIRDKKKLQmELEEQHNKEKLNLEEDKNQLQQ---ELENLKEVLE 545
Cdd:PRK01156 554 RYKSLKLEDLDSkrtswlnaLAVISLIDIETNRSRSNEIKKQLN-DLESRLQEIEIGFPDDKSYIDKsirEIENEANNLN 632
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622930354 546 DKLNTAnQEIGRLQDLVRKSEQGLGSAEGLIASLQDSQERLQTELDLTKDSLKETKDALLNVEGELEQERQQHE 619
Cdd:PRK01156 633 NKYNEI-QENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIE 705
|
|
| |
