|
Name |
Accession |
Description |
Interval |
E-value |
| PACT_coil_coil |
pfam10495 |
Pericentrin-AKAP-450 domain of centrosomal targeting protein; This domain is a coiled-coil ... |
3706-3787 |
2.81e-25 |
|
Pericentrin-AKAP-450 domain of centrosomal targeting protein; This domain is a coiled-coil region close to the C-terminus of centrosomal proteins that is directly responsible for recruiting AKAP-450 and pericentrin to the centrosome. Hence the suggested name for this region is a PACT domain (pericentrin-AKAP-450 centrosomal targeting). This domain is also present at the C-terminus of coiled-coil proteins from Drosophila and S. pombe, and that from the Drosophila protein is sufficient for targeting to the centrosome in mammalian cells. The function of these proteins is unknown but they seem good candidates for having a centrosomal or spindle pole body location. The final 22 residues of this domain in AKAP-450 appear specifically to be a calmodulin-binding domain indicating that this member at least is likely to contribute to centrosome assembly.
Pssm-ID: 463115 Cd Length: 77 Bit Score: 101.52 E-value: 2.81e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3706 KYLRAESFRKALIYQKKYLLLLLGGFQECEDATLALLARMGGQPAFTdleviTNRPKGFTRFRSAVRVSIAISRMKFLVR 3785
Cdd:pfam10495 1 KLLREESFRKDLAYQKKYLLLLLGGYQACNKADLRLLAQMGVTPPDD-----RPSRKPRRKLKSAALAVIAIARMKRLAR 75
|
..
gi 1622925510 3786 RW 3787
Cdd:pfam10495 76 EW 77
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
270-998 |
5.10e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 5.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 270 IRTHQQQLEEQDHLLEDYQKKKEdftmQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELK 349
Cdd:TIGR02168 198 LERQLKSLERQAEKAERYKELKA----ELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 350 DKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNhkdsqfetdivqrmeQETQRK 429
Cdd:TIGR02168 274 LEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL---------------DELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 430 LEQLRAELDEMygQQIVQMKQELIRQHVSQMEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQK 509
Cdd:TIGR02168 339 LAELEEKLEEL--KEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 510 EKLKEELGVILE-----EKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKE 584
Cdd:TIGR02168 417 ERLQQEIEELLKkleeaELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLER 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 585 LELKHEAEvTNYKIKLEMLEKEKNAVLDRMAESQEAElERLRTQLLFSHEEELSKL-KEDLEIEHQInIEKLKDN----- 658
Cdd:TIGR02168 497 LQENLEGF-SEGVKALLKNQSGLSGILGVLSELISVD-EGYEAAIEAALGGRLQAVvVENLNAAKKA-IAFLKQNelgrv 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 659 ----LGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLkdLQQSLVNSKSEEMTLQINELQKEIEIL--- 731
Cdd:TIGR02168 574 tflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYL--LGGVLVVDDLDNALELAKKLRPGYRIVtld 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 732 ------------RQEEKEKGTLE--QEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMlkihtpd 797
Cdd:TIGR02168 652 gdlvrpggvitgGSAKTNSSILErrREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEEL------- 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 798 NQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEvnyqELQEEYAcllKVKDD 877
Cdd:TIGR02168 725 SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE----ELEAQIE---QLKEE 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 878 LEDSknkqeleyKSKLKALNEELHLQRINPTTVKTKSSVFDEDKTFVAETLEMGEVVEKDTTELMEKLEvtkREKLELSQ 957
Cdd:TIGR02168 798 LKAL--------REALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLA---AEIEELEE 866
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1622925510 958 RLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELE 998
Cdd:TIGR02168 867 LIEELESELEALLNERASLEEALALLRSELEELSEELRELE 907
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
207-884 |
7.84e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 91.66 E-value: 7.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 207 ITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLED 286
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 287 YQKKKEDFTMQISFLQEKIkvyemEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQV 366
Cdd:TIGR02168 314 LERQLEELEAQLEELESKL-----DELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKV 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 367 VQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNH----KDSQFETDIVQRMEQETQRKLEQLRAELDEMyg 442
Cdd:TIGR02168 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEeaelKELQAELEELEEELEELQEELERLEEALEEL-- 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 443 QQIVQMKQELIRQHVSQMEELKTRHKG--EMENALRSYP----NITVNEDQIK--------------------------- 489
Cdd:TIGR02168 467 REELEEAEQALDAAERELAQLQARLDSleRLQENLEGFSegvkALLKNQSGLSgilgvlselisvdegyeaaieaalggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 490 LMNVAINELNIKLQDTNSQKEKLKEELGVI-------------------------------------------------- 519
Cdd:TIGR02168 547 LQAVVVENLNAAKKAIAFLKQNELGRVTFLpldsikgteiqgndreilkniegflgvakdlvkfdpklrkalsyllggvl 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 520 ----LEEKCALQRQL-----------------------EDLFEELSFSREQ-IQRARQTIAEQESKLNEAQKSLSTVEDL 571
Cdd:TIGR02168 627 vvddLDNALELAKKLrpgyrivtldgdlvrpggvitggSAKTNSSILERRReIEELEEKIEELEEKIAELEKALAELRKE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 572 KAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMA-------------ESQEAELERLRTQLLfSHEEELS 638
Cdd:TIGR02168 707 LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAqlskelteleaeiEELEERLEEAEEELA-EAEAEIE 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 639 KLKEDLE---IEHQINIEKLKDNLGIHYKQQIDGLQNEmsQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLvNSKSE 715
Cdd:TIGR02168 786 ELEAQIEqlkEELKALREALDELRAELTLLNEEAANLR--ERLESLERRIAATERRLEDLEEQIEELSEDIESL-AAEIE 862
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 716 EMTLQINELQKEIEILrqeEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMlkiht 795
Cdd:TIGR02168 863 ELEELIEELESELEAL---LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGL----- 934
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 796 pdnQEERLIFIDSIKSKSKDS--VWEKEIEILTEENEDLKQQCIQLNEEIEkqrntfSFAEKNFEV--NYQELQEEYACL 871
Cdd:TIGR02168 935 ---EVRIDNLQERLSEEYSLTleEAEALENKIEDDEEEARRRLKRLENKIK------ELGPVNLAAieEYEELKERYDFL 1005
|
810
....*....|...
gi 1622925510 872 LKVKDDLEDSKNK 884
Cdd:TIGR02168 1006 TAQKEDLTEAKET 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1851-2616 |
1.22e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 1.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1851 RLQAAVEKLLEAISETSSQLEHAKvTQTELMrESFRQKQEATESLKCQ------EDLRERLHEESRAREQLAVELSKAEG 1924
Cdd:TIGR02168 183 RTRENLDRLEDILNELERQLKSLE-RQAEKA-ERYKELKAELRELELAllvlrlEELREELEELQEELKEAEEELEELTA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1925 VIDGYADEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQL--LQETEK 2002
Cdd:TIGR02168 261 ELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLdeLAEELA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2003 LMKEKLEvqcQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQE---KNAELMDLRQQNQALEKQLEKMRKFLdeQAIDRE 2079
Cdd:TIGR02168 341 ELEEKLE---ELKEELESLEAELEELEAELEELESRLEELEEQletLRSKVAQLELQIASLNNEIERLEARL--ERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2080 HERDVFQQEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELE 2159
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2160 qALLVSADTFQK-----VEDRKQFGA----------VEAKPELSLEVQLQAERDAIDRKEKEITNLE-EQLEQ------- 2216
Cdd:TIGR02168 496 -RLQENLEGFSEgvkalLKNQSGLSGilgvlselisVDEGYEAAIEAALGGRLQAVVVENLNAAKKAiAFLKQnelgrvt 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2217 FREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKL--GLAIKESDAVSTQDQHVL------------- 2281
Cdd:TIGR02168 575 FLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLlgGVLVVDDLDNALELAKKLrpgyrivtldgdl 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2282 ----------FGKFAQIIQEKEVEIDQLNEQIMKLQQQLKIT--------TDNKVIEEKNELIRDLETQIECLMSDQECV 2343
Cdd:TIGR02168 655 vrpggvitggSAKTNSSILERRREIEELEEKIEELEEKIAELekalaelrKELEELEEELEQLRKELEELSRQISALRKD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2344 KRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLdmviAEKLALEQQVETTNEEMTFTKNILKETNF 2423
Cdd:TIGR02168 735 LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAE----AEIEELEAQIEQLKEELKALREALDELRA 810
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2424 KMNQLTQELFSLKRERESMEKIQSIPGKSVNMA---IDDMSKDKPELEVVLTEDALKSLENQTYLKSFEENGKGSIINLE 2500
Cdd:TIGR02168 811 ELTLLNEEAANLRERLESLERRIAATERRLEDLeeqIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALA 890
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2501 TRLLQLES------TVRAKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEEKVAAALVSQIQLEAVQEYAKFCQ 2574
Cdd:TIGR02168 891 LLRSELEElseelrELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEA 970
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 1622925510 2575 DNQTISSEPERTNIQNLNQLREDEsgsnISALTLRISELESQ 2616
Cdd:TIGR02168 971 RRRLKRLENKIKELGPVNLAAIEE----YEELKERYDFLTAQ 1008
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
154-968 |
3.94e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 86.28 E-value: 3.94e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 154 LTHLEMMESELAGKQHEIEELNRELEEMRVtygteglqQLQEFEAAIKQRDGIITQLtanlqqARREKDETMREFLELTE 233
Cdd:TIGR02169 229 LKEKEALERQKEAIERQLASLEEELEKLTE--------EISELEKRLEEIEQLLEEL------NKKIKDLGEEEQLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 234 QSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKI--KVYEME 311
Cdd:TIGR02169 295 KIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELedLRAELE 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 312 QDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSS 391
Cdd:TIGR02169 375 EVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 392 EEIKQLMGTVEELQKRNHKDSQfETDIVQRMEQETQRKLEQLRAELD-----EMYGQQIVQMKQELIRQ---HVSQMEEL 463
Cdd:TIGR02169 455 WKLEQLAADLSKYEQELYDLKE-EYDRVEKELSKLQRELAEAEAQARaseerVRGGRAVEEVLKASIQGvhgTVAQLGSV 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 464 KTRHKGEMENALRSYPNITVNED------------QIKLMNVAINELNiKLQDTNSQKEKLKEElGVI--------LEEK 523
Cdd:TIGR02169 534 GERYATAIEVAAGNRLNNVVVEDdavakeaiellkRRKAGRATFLPLN-KMRDERRDLSILSED-GVIgfavdlveFDPK 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 524 --CALQRQLED--LFEELSFSREQIQRARQTIAEQEskLNEAQKSLS--TVEDLKAEIVSASESRKELELKHEaevtnyk 597
Cdd:TIGR02169 612 yePAFKYVFGDtlVVEDIEAARRLMGKYRMVTLEGE--LFEKSGAMTggSRAPRGGILFSRSEPAELQRLRER------- 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 598 ikLEMLEKEKNAVLDRMAEsQEAELERLRTQLLFSHEE--ELSKLKEDLEIEHQINIEKLKdnlgihykqQIDGLQNEMS 675
Cdd:TIGR02169 683 --LEGLKRELSSLQSELRR-IENRLDELSQELSDASRKigEIEKEIEQLEQEEEKLKERLE---------ELEEDLSSLE 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 676 QKIETMQFEKDNLITKQNQLILEISKLK----DLQQSLVNSKSEEMTLQINELQKEI-----------EILRQEEKEKGT 740
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEealnDLEARLSHSRIPEIQAELSKLEEEVsriearlreieQKLNRLTLEKEY 830
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 741 LEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMlkihtpdnqEERLIFIdsikskskdsvwEK 820
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL---------ESRLGDL------------KK 889
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 821 EIEILTEENEDLKQQCIQLNEEIEKQRNTFsfaeKNFEVNYQELQEEYACLLK-VKDDLEDSKNKQELE-YKSKLKALNE 898
Cdd:TIGR02169 890 ERDELEAQLRELERKIEELEAQIEKKRKRL----SELKAKLEALEEELSEIEDpKGEDEEIPEEELSLEdVQAELQRVEE 965
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 899 ELhlQRINPTTVKTkssvfdedktfvaetLEMGEVVEKDTTELMEKLEVTKREKLELSQRLADLSEQLKQ 968
Cdd:TIGR02169 966 EI--RALEPVNMLA---------------IQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
173-988 |
2.87e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.18 E-value: 2.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 173 ELNRELEEMRVTYgteglqQLQEFEAAIKQRDgiitQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQASETLR 252
Cdd:TIGR02168 217 ELKAELRELELAL------LVLRLEELREELE----ELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 253 NSTHSSTAADLLQAKQQIRTHQQQLEEqdhlLEDYQKKKEDftmQISFLQEKIkvyemEQDKKVENSNKEEIQEKETIIE 332
Cdd:TIGR02168 287 QKELYALANEISRLEQQKQILRERLAN----LERQLEELEA---QLEELESKL-----DELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 333 ELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNH--- 409
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEeae 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 410 -KDSQFETDIVQRMEQETQRKLEQLRAELDEMygQQIVQMKQELIRQHVSQMEELKTRHKG--EMENALRSYP----NIT 482
Cdd:TIGR02168 435 lKELQAELEELEEELEELQEELERLEEALEEL--REELEEAEQALDAAERELAQLQARLDSleRLQENLEGFSegvkALL 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 483 VNEDQIK-LMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQ-ESKLNE 560
Cdd:TIGR02168 513 KNQSGLSgILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEiQGNDRE 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 561 AQKSLSTVEDLKAEIVSASES-RKELE--LKHEAEVTNYKIKLEMLEKEKnavLDRMAESQEAEL----------ERLRT 627
Cdd:TIGR02168 593 ILKNIEGFLGVAKDLVKFDPKlRKALSylLGGVLVVDDLDNALELAKKLR---PGYRIVTLDGDLvrpggvitggSAKTN 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 628 QLLFSHEEELSKLKEDLEiEHQINIEKLKDNLgihykQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQ 707
Cdd:TIGR02168 670 SSILERRREIEELEEKIE-ELEEKIAELEKAL-----AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 708 SLvnskSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKAL 787
Cdd:TIGR02168 744 QL----EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 788 edmlkihtpDNQEERLifidsIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEE 867
Cdd:TIGR02168 820 ---------ANLRERL-----ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASL 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 868 YACLLKVKDDLEDsKNKQELEYKSKLKALNEELHLQRINPTTVKTKSSVFDEDktfVAETLEMGEVVEKDTTELMEKLEV 947
Cdd:TIGR02168 886 EEALALLRSELEE-LSEELRELESKRSELRRELEELREKLAQLELRLEGLEVR---IDNLQERLSEEYSLTLEEAEALEN 961
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 1622925510 948 TKREKLELSQRLADLSEQLKQKHGEISFLN-EEVKSLKQEKE 988
Cdd:TIGR02168 962 KIEDDEEEARRRLKRLENKIKELGPVNLAAiEEYEELKERYD 1003
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
173-790 |
1.18e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.14 E-value: 1.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 173 ELNRELEEMRVTYGtegLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQASETLR 252
Cdd:COG1196 217 ELKEELKELEAELL---LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 253 NSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDKKvensnKEEIQEKETIIE 332
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEA-----EAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 333 ELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNHKDs 412
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA- 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 413 qfetdivQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHVSQMEELKTRHKGEMENALRSYPNITVNEDQIKLMN 492
Cdd:COG1196 448 -------AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 493 VAINELNIKLQDTNSQKEKLKEELGVILEEK-CALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDL 571
Cdd:COG1196 521 GLAGAVAVLIGVEAAYEAALEAALAAALQNIvVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 572 KAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQIN 651
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 652 IEKLKDNLGIHYKQQIDGLQNEMSQKIEtmqfekdnlitkQNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEIL 731
Cdd:COG1196 681 LEELAERLAEEELELEEALLAEEEEERE------------LAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 732 RQEEKEKGTLEQEVQELQLKIELLEKQMKEKE----------NDLQEKFTQLEAENSILKDEKKALEDM 790
Cdd:COG1196 749 EEEALEELPEPPDLEELERELERLEREIEALGpvnllaieeyEELEERYDFLSEQREDLEEARETLEEA 817
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
150-772 |
1.72e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 80.75 E-value: 1.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 150 AQYSLTHLEMMESELAGKQHEIEELNRELEEMRvtygteglQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFL 229
Cdd:COG1196 227 AELLLLKLRELEAELEELEAELEELEAELEELE--------AELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 230 ELTEQSQKLQIQFQQLQASETlrnsthsSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYE 309
Cdd:COG1196 299 RLEQDIARLEERRRELEERLE-------ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 310 MEQDKKVE--NSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKE 387
Cdd:COG1196 372 AELAEAEEelEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 388 RQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMK-----QELIRQHVSQMEE 462
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAlllagLRGLAGAVAVLIG 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 463 LKTRHKGEMENALRSYPNITVNEDQIKLMNvAINELNIK-------LQDTNSQKEKLKEELGVILEEKCALQRQLEDLFE 535
Cdd:COG1196 532 VEAAYEAALEAALAAALQNIVVEDDEVAAA-AIEYLKAAkagratfLPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 536 ELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEvtnykIKLEMLEKEKNAVLDRMA 615
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSR-----RELLAALLEAEAELEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 616 ESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQL 695
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 696 ILEISKLKDLQQSL--VNSKSEEmtlQINELQKEIEILrqeEKEKGTLEQEVQELQLKIELLEKQMKEKendLQEKFTQ 772
Cdd:COG1196 766 ERELERLEREIEALgpVNLLAIE---EYEELEERYDFL---SEQREDLEEARETLEEAIEEIDRETRER---FLETFDA 835
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
2031-2434 |
3.86e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.72 E-value: 3.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2031 DVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHERDVFQQEIQKLEQQLKVVPRFQPISEHQT 2110
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2111 REVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQfgaveakpelSLE 2190
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLE----------SLE 830
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2191 VQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKEsttrLQELEQENKLFKDDMEKLGLAIKES 2270
Cdd:TIGR02168 831 RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNE----RASLEEALALLRSELEELSEELREL 906
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2271 DAVSTQDQHVL------FGKFAQIIQEKEVEIDQLNEQIMklqqqlkittdnkvieekNELIRDLETQIEClmsdqecvK 2344
Cdd:TIGR02168 907 ESKRSELRRELeelrekLAQLELRLEGLEVRIDNLQERLS------------------EEYSLTLEEAEAL--------E 960
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2345 RNREEEIEQLNEVIEKLQQELANIGQKTLV---DAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMtftKNILKET 2421
Cdd:TIGR02168 961 NKIEDDEEEARRRLKRLENKIKELGPVNLAaieEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREA---RERFKDT 1037
|
410
....*....|...
gi 1622925510 2422 NFKMNQLTQELFS 2434
Cdd:TIGR02168 1038 FDQVNENFQRVFP 1050
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
133-898 |
6.06e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.96 E-value: 6.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 133 LLREEEFGVDDSYSEQGAQYSlTHLEMMESELAGKQHEIEELNRELEEMRvtygteglQQLQEFEAAIKQRDGIITQLTA 212
Cdd:TIGR02169 273 LLEELNKKIKDLGEEEQLRVK-EKIGELEAEIASLERSIAEKERELEDAE--------ERLAKLEAEIDKLLAEIEELER 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 213 NLQQARREKDETMREFLELTEQSQKLQIQFQQLQAsetlrnsTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKE 292
Cdd:TIGR02169 344 EIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK-------EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 293 DFTMQISFLQEKIKVYEMEQDK--KVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKN 370
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINEleEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAE 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 371 QEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELqkrnhkdSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQ 450
Cdd:TIGR02169 497 AQARASEERVRGGRAVEEVLKASIQGVHGTVAQL-------GSVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKR 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 451 E---------LIRQHVSQMEELKTRHKGEMENAL------RSYPNI-------TVNEDQI----KLMNV----------- 493
Cdd:TIGR02169 570 RkagratflpLNKMRDERRDLSILSEDGVIGFAVdlvefdPKYEPAfkyvfgdTLVVEDIeaarRLMGKyrmvtlegelf 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 494 ----AINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLstvE 569
Cdd:TIGR02169 650 eksgAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEI---E 726
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 570 DLKAEIVSASESRKELELKHEA---EVTNYKIKLEMLEKEKNAvLDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEI 646
Cdd:TIGR02169 727 QLEQEEEKLKERLEELEEDLSSleqEIENVKSELKELEARIEE-LEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEE 805
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 647 EHqinieklkdnlgihykQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDlQQSLVNSKSEEMTLQINELQK 726
Cdd:TIGR02169 806 EV----------------SRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE-QIKSIEKEIENLNGKKEELEE 868
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 727 EIEILRQEEKEkgtLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEdmlkihtpdNQEERLIFI 806
Cdd:TIGR02169 869 ELEELEAALRD---LESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLE---------ALEEELSEI 936
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 807 DSIKSKSKDSVWEKEIEilteenEDLKQQCIQLNEEIEKQRntfsfaeknfEVNYQELQeEYACLLKVKDDLEDSKNKQE 886
Cdd:TIGR02169 937 EDPKGEDEEIPEEELSL------EDVQAELQRVEEEIRALE----------PVNMLAIQ-EYEEVLKRLDELKEKRAKLE 999
|
810
....*....|..
gi 1622925510 887 LEYKSKLKALNE 898
Cdd:TIGR02169 1000 EERKAILERIEE 1011
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1851-2421 |
1.40e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.67 E-value: 1.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1851 RLQAAVEKLLEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYA 1930
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELE 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1931 DEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQL--LQETEKLMKEKL 2008
Cdd:COG1196 337 EELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLeeLEEAEEALLERL 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2009 EVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDE--QAIDREHERDVFQ 2086
Cdd:COG1196 417 ERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEllEELAEAAARLLLL 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2087 QEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKlefRVRELEQALLVSA 2166
Cdd:COG1196 497 LEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAA---AAIEYLKAAKAGR 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2167 DTFQKVEDRKQFGAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFR----EELENKNEEVQQLHMQLEIQKKES 2242
Cdd:COG1196 574 ATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRtlvaARLEAALRRAVTLAGRLREVTLEG 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2243 TTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKITTDNKVIEEK 2322
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2323 NELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEKLQQELANIG---QKTLVDAHSLPEEADSLKHQLDMVIAEKLA 2399
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGpvnLLAIEEYEELEERYDFLSEQREDLEEARET 813
|
570 580
....*....|....*....|..
gi 1622925510 2400 LEQQVETTNEEMtftKNILKET 2421
Cdd:COG1196 814 LEEAIEEIDRET---RERFLET 832
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
321-884 |
3.87e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.13 E-value: 3.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 321 KEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGT 400
Cdd:COG1196 245 EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 401 VEELQKRNHKDSQfETDIVQRMEQETQRKLEQLRAELdemygQQIVQMKQELIRQHVSQMEELKTRHKGEMENALRsypn 480
Cdd:COG1196 325 LAELEEELEELEE-ELEELEEELEEAEEELEEAEAEL-----AEAEEALLEAEAELAEAEEELEELAEELLEALRA---- 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 481 ITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNE 560
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 561 AQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNA--------VLDRMAESQEAELERLRTQLLFS 632
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAgavavligVEAAYEAALEAALAAALQNIVVE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 633 HEEELSKLKEDLEIE----------HQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKL 702
Cdd:COG1196 555 DDEVAAAAIEYLKAAkagratflplDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 703 KDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKD 782
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 783 EKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEILTEEN-EDLKQQCIQLNEEIEkqrntfsfaekNFE-VN 860
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDlEELERELERLEREIE-----------ALGpVN 783
|
570 580 590
....*....|....*....|....*....|
gi 1622925510 861 ------YQELQEEYACLLKVKDDLEDSKNK 884
Cdd:COG1196 784 llaieeYEELEERYDFLSEQREDLEEARET 813
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
154-792 |
8.94e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 74.67 E-value: 8.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 154 LTHLEMMESELAGKQHEIEELNRELEEMR--VTYGTEGLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLEL 231
Cdd:TIGR04523 144 LTEIKKKEKELEKLNNKYNDLKKQKEELEneLNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISEL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 232 TEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEME 311
Cdd:TIGR04523 224 KKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 312 QDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSS 391
Cdd:TIGR04523 304 KEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYK 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 392 EEIKQLMGTVEELQKrnhkdsqfETDIVQRMEQETQRKLEQLRAELDEMyGQQIVQMKQELIRQH--VSQMEELKTRHKG 469
Cdd:TIGR04523 384 QEIKNLESQINDLES--------KIQNQEKLNQQKDEQIKKLQQEKELL-EKEIERLKETIIKNNseIKDLTNQDSVKEL 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 470 EMENALRSypnITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQ 549
Cdd:TIGR04523 455 IIKNLDNT---RESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLES 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 550 TIAEQESKLNeaqkslstveDLKAEIVSASESRKELELkhEAEVTNYKIKLEMLEKEKNAVLDRMAESQEaELERLRTQL 629
Cdd:TIGR04523 532 EKKEKESKIS----------DLEDELNKDDFELKKENL--EKEIDEKNKEIEELKQTQKSLKKKQEEKQE-LIDQKEKEK 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 630 LFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLqqsl 709
Cdd:TIGR04523 599 KDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTK---- 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 710 vnskseemtlqineLQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKqmkekendLQEKFTQLEAENSILKDEKKALED 789
Cdd:TIGR04523 675 --------------IDDIIELMKDWLKELSLHYKKYITRMIRIKDLPK--------LEEKYKEIEKELKKLDEFSKELEN 732
|
...
gi 1622925510 790 MLK 792
Cdd:TIGR04523 733 IIK 735
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
2134-2755 |
2.06e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.94 E-value: 2.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2134 KEQLQRDIQERNEEIEKLEFRVRELE--------QALLVSADTFQKVEDRKQFGAVEAKPELSLEVQLQAERDAIDRKEK 2205
Cdd:TIGR02168 174 RKETERKLERTRENLDRLEDILNELErqlkslerQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2206 EITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKE---STTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVL- 2281
Cdd:TIGR02168 254 ELEELTAELQELEEKLEELRLEVSELEEEIEELQKElyaLANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLd 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2282 -----FGKFAQIIQEKEVEIDQLNEQIMKLQQQL-----KITTDNKVIEEKNELIRDLETQIECLMSDQEcvkrNREEEI 2351
Cdd:TIGR02168 334 elaeeLAELEEKLEELKEELESLEAELEELEAELeelesRLEELEEQLETLRSKVAQLELQIASLNNEIE----RLEARL 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2352 EQLNEVIEKLQQELANIGQK-TLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQ 2430
Cdd:TIGR02168 410 ERLEDRRERLQQEIEELLKKlEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2431 ELFSLKRERESMEKI----------QSIPGKSVNMAIDDMSKDK-----------PELEVVLTEDALKSLENQTYLKSfE 2489
Cdd:TIGR02168 490 RLDSLERLQENLEGFsegvkallknQSGLSGILGVLSELISVDEgyeaaieaalgGRLQAVVVENLNAAKKAIAFLKQ-N 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2490 ENGKGSIINLETRLLQLESTVRAKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEEkVAAALVSQIQLEAvqEY 2569
Cdd:TIGR02168 569 ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDD-LDNALELAKKLRP--GY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2570 AKFCQDNQTISSE------PERTNIQNLNQLRE-DESGSNISALTLRISELESQLVEMHTSLILGKEQVEIAEKNVLEKE 2642
Cdd:TIGR02168 646 RIVTLDGDLVRPGgvitggSAKTNSSILERRREiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2643 KKLLELQKLLEGNEKKQGGKERKRSPQDFEVLKTTtelfhsNEESGFLNELEALRAESVATKAQLTGYKEKTEKLQGELL 2722
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELE------AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK 799
|
650 660 670
....*....|....*....|....*....|...
gi 1622925510 2723 IKETNMASLQKDLSQVRDHLAEAKEKLSILEKE 2755
Cdd:TIGR02168 800 ALREALDELRAELTLLNEEAANLRERLESLERR 832
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1998-2762 |
3.34e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.17 E-value: 3.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1998 QETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEeQVSRFIEL-EQEKNAELMDLRQQNQALEKQLEKmrkfLDEQAI 2076
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDILNELERQLKSLERQAE-KAERYKELkAELRELELALLVLRLEELREELEE----LQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2077 DREHERDVFQQEIQKLEQQLKVVPRFQPISEhqtREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVR 2156
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELE---EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2157 ELEQALLVSADTFQKVEDRKQfgaveakpelSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLE 2236
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLE----------ELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2237 IQKKEST---TRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQhvlfgkfaqiIQEKEVEIDQLNEQIMKLQQQLKIT 2313
Cdd:TIGR02168 397 SLNNEIErleARLERLEDRRERLQQEIEELLKKLEEAELKELQAE----------LEELEEELEELQEELERLEEALEEL 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2314 TDNkvIEEKNELIRDLETQIECLmsdqecvkRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLDMV 2393
Cdd:TIGR02168 467 REE--LEEAEQALDAAERELAQL--------QARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYE 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2394 IAEKLALE---QQVETTNEEMTF-TKNILKETNFkmNQLTQELFSLKRERE----SMEKIQSIPGksVNMAIDDMSKDKP 2465
Cdd:TIGR02168 537 AAIEAALGgrlQAVVVENLNAAKkAIAFLKQNEL--GRVTFLPLDSIKGTEiqgnDREILKNIEG--FLGVAKDLVKFDP 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2466 ELEVVLtEDAL------KSLENQTYLKSfEENGKGSIINLETRLL-----------QLESTVRAKDLELTQCYKQIKDMQ 2528
Cdd:TIGR02168 613 KLRKAL-SYLLggvlvvDDLDNALELAK-KLRPGYRIVTLDGDLVrpggvitggsaKTNSSILERRREIEELEEKIEELE 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2529 EQ---GQSEIEVLQKKILNLQKILEEKVAAALVSQIQLEAVQEYAKFcqdnqtissepERTNIQNLNQLREDESGsNISA 2605
Cdd:TIGR02168 691 EKiaeLEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR-----------LEAEVEQLEERIAQLSK-ELTE 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2606 LTLRISELESQLVEMHTSLILGKEQVEIAEKNVLEKEKKLLELQKLLEGNEKKQGGKERKRSPQDFEVLKTTTELFHSNE 2685
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATER 838
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622925510 2686 ESGFLNE-LEALRAESVATKAQLTGYKEKTEKLQGELLIKETNMASLQKDLSQVRDHLAEAKEKLSILEKEDKTAVQE 2762
Cdd:TIGR02168 839 RLEDLEEqIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
195-988 |
9.46e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 71.93 E-value: 9.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 195 EFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQASETLrnsthsSTAADLLQAKQQIRTHQ 274
Cdd:pfam02463 159 EEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQL------KEKLELEEEYLLYLDYL 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 275 QQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKvyEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTA 354
Cdd:pfam02463 233 KLNEERIDLLQELLRDEQEEIESSKQEIEKEE--EKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKV 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 355 ADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGT-VEELQKRNHKDSQFETDIVQRMEQETQRKLEQL 433
Cdd:pfam02463 311 DDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEeEEELEKLQEKLEQLEEELLAKKKLESERLSSAA 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 434 RAELDEMYGQQIVQMKQELIRQHVSQMEELKTRHKgemeNALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLK 513
Cdd:pfam02463 391 KLKEEELELKSEEEKEAQLLLELARQLEDLLKEEK----KEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELE 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 514 EELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKaeivSASESRKELELKHEAEV 593
Cdd:pfam02463 467 LKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRII----SAHGRLGDLGVAVENYK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 594 TNYKIKLEMLEKEKNAVLDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNE 673
Cdd:pfam02463 543 VAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRA 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 674 MSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIE 753
Cdd:pfam02463 623 KVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIK 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 754 LLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLifiDSIKSKSKDSVWEKEIEILTEENEDLK 833
Cdd:pfam02463 703 KKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEE---EKSRLKKEEKEEEKSELSLKEKELAEE 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 834 QQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQRINPTTVKTK 913
Cdd:pfam02463 780 REKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERL 859
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 914 SSVFDEDKTFVAETLEMGEVVEKDTTELMEKLEVTKREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQEKE 988
Cdd:pfam02463 860 EEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYE 934
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
158-986 |
2.33e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 70.53 E-value: 2.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 158 EMMESELAGKQHEIEELNRELEEmrvtygTEGLQQLQEFEAaikqRDGIItQLTANLQQARREKDeTMREFLELTEQSQ- 236
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNE------SNELHEKQKFYL----RQSVI-DLQTKLQEMQMERD-AMADIRRRESQSQe 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 237 ----KLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDftmqisflqekiKVYEMEQ 312
Cdd:pfam15921 142 dlrnQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGK------------KIYEHDS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 313 DKKVENSNKEEIQEKetIIEELNTKIIEEEKKTLELKDKLTA-----ADKLLGELQEQVVQKNQEIKNMKLELTNSKQKE 387
Cdd:pfam15921 210 MSTMHFRSLGSAISK--ILRELDTEISYLKGRIFPVEDQLEAlksesQNKIELLLQQHQDRIEQLISEHEVEITGLTEKA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 388 RQSSEEIKQLMGTVEELQKRnhkdSQFETDIVQRMEQETQRKLEQLRAELDE---MYGQQIVQMKQELIRQHvSQMEELK 464
Cdd:pfam15921 288 SSARSQANSIQSQLEIIQEQ----ARNQNSMYMRQLSDLESTVSQLRSELREakrMYEDKIEELEKQLVLAN-SELTEAR 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 465 T------RHKGEMENALRSY-PNITVNEDQIKLMNvainELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEEL 537
Cdd:pfam15921 363 TerdqfsQESGNLDDQLQKLlADLHKREKELSLEK----EQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAM 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 538 SfSREQIQRARQTIAEQESklneaQKSLSTVEDLKAEIvsasESRKELELKHEAEVTNYKIKLEMLEKeknAVLDRMAES 617
Cdd:pfam15921 439 K-SECQGQMERQMAAIQGK-----NESLEKVSSLTAQL----ESTKEMLRKVVEELTAKKMTLESSER---TVSDLTASL 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 618 QEAElerlrtQLLFSHEEELSKLKEDLEIEhqinIEKLKdnlgiHYKQQIDGLQNemsqkietmqfekdnlitkqnqlil 697
Cdd:pfam15921 506 QEKE------RAIEATNAEITKLRSRVDLK----LQELQ-----HLKNEGDHLRN------------------------- 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 698 eisklkdlqqslVNSKSEEMTLQINELQKEIEILRQEEKEK----GTLEQEVQELQLKIELLEKQMKEKENDLQEKftql 773
Cdd:pfam15921 546 ------------VQTECEALKLQMAEKDKVIEILRQQIENMtqlvGQHGRTAGAMQVEKAQLEKEINDRRLELQEF---- 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 774 eaenSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSvwekeieilteenEDLKQQCIQLNEEIEKQRNTFSFA 853
Cdd:pfam15921 610 ----KILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAV-------------KDIKQERDQLLNEVKTSRNELNSL 672
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 854 EKNFEVNYQELQEEyacllkvKDDLEDSKNKQELEYKSKLKALNEELH-LQRINPTTVKTKSSVFDEDKTFVAETLEMG- 931
Cdd:pfam15921 673 SEDYEVLKRNFRNK-------SEEMETTTNKLKMQLKSAQSELEQTRNtLKSMEGSDGHAMKVAMGMQKQITAKRGQIDa 745
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 932 -----EVVEKDTTELMEKLEVTKREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQE 986
Cdd:pfam15921 746 lqskiQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEK 805
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
309-856 |
5.05e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 68.89 E-value: 5.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 309 EMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKEr 388
Cdd:TIGR04523 132 QKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKI- 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 389 qssEEIKQLMGTVEELQKRNhkdSQFETDIvqrmeQETQRKLEQLRAELDEMYgQQIVQMKQElirqhvsQMEELKTRHK 468
Cdd:TIGR04523 211 ---QKNKSLESQISELKKQN---NQLKDNI-----EKKQQEINEKTTEISNTQ-TQLNQLKDE-------QNKIKKQLSE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 469 GEMEnalrsypnITVNEDQIKLMNVAINELNIKLQDTNSQKE-----KLKEELGVILEEKCALQRQLEDLFEELSFSREQ 543
Cdd:TIGR04523 272 KQKE--------LEQNNKKIKELEKQLNQLKSEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNEQ 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 544 IQRARQTIAEQESKLNEAQKSL----STVEDLKAEIVSASESRKELELKHEAEVTNYKI--KLEMLEKEKNAVLDRMAES 617
Cdd:TIGR04523 344 ISQLKKELTNSESENSEKQRELeekqNEIEKLKKENQSYKQEIKNLESQINDLESKIQNqeKLNQQKDEQIKKLQQEKEL 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 618 QEAELERLRTQLLFSHEEELSKLKEDLEIEHQI-NIEKLKDNLgihyKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLI 696
Cdd:TIGR04523 424 LEKEIERLKETIIKNNSEIKDLTNQDSVKELIIkNLDNTRESL----ETQLKVLSRSINKIKQNLEQKQKELKSKEKELK 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 697 LEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKgTLEQEVQELQ--LKIELLEKQMKEKendlQEKFTQLE 774
Cdd:TIGR04523 500 KLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIS-DLEDELNKDDfeLKKENLEKEIDEK----NKEIEELK 574
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 775 AENSILKDEKKALEDMLKIHTPDNQEerLIFIDSIKSKSKDSVwEKEIEILTEENEDL--------------KQQCIQLN 840
Cdd:TIGR04523 575 QTQKSLKKKQEEKQELIDQKEKEKKD--LIKEIEEKEKKISSL-EKELEKAKKENEKLssiiknikskknklKQEVKQIK 651
|
570
....*....|....*.
gi 1622925510 841 EEIEKQRNTFSFAEKN 856
Cdd:TIGR04523 652 ETIKEIRNKWPEIIKK 667
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1886-2459 |
9.06e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.42 E-value: 9.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1886 RQKQEATESLKCQEDLRERLHEE-SRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQELLcasnrlqEL 1964
Cdd:COG1196 207 RQAEKAERYRELKEELKELEAELlLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELE-------EL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1965 EAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQcQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQ 2044
Cdd:COG1196 280 ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELA-ELEEELEELEEELEELEEELEEAEEELEEAEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2045 EKNAELMDLRQQNQALEKQLEKMRKFLDEQAiDREHERDVFQQEIQKLEQQLKVVPRFQpisEHQTREVEQLTNHLKEKT 2124
Cdd:COG1196 359 ELAEAEEALLEAEAELAEAEEELEELAEELL-EALRAAAELAAQLEELEEAEEALLERL---ERLEEELEELEEALAELE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2125 DKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAKPELSLEVQLQAERDAIDRKE 2204
Cdd:COG1196 435 EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2205 KEI--------------------TNLEEQLEQFREELENKNEEVQQLHMQLEIQKKES------TTRLQELEQENKLFKD 2258
Cdd:COG1196 515 LLAglrglagavavligveaayeAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGratflpLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2259 DMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKITT-DNKVIEEKNELIRDLETQIEclm 2337
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTlEGEGGSAGGSLTGGSRRELL--- 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2338 SDQECVKRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNI 2417
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1622925510 2418 LKE---TNFKMNQLTQELFSLKRERESMEKiqsipgksVNM-AIDD 2459
Cdd:COG1196 752 ALEelpEPPDLEELERELERLEREIEALGP--------VNLlAIEE 789
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
553-886 |
1.27e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.16 E-value: 1.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 553 EQESKLNEAQKSLSTVEDLKAEIvsasesRKELE-LKHEAEVTN-YKIKLEMLEKEKNAVLDRMAESQEAELERLRTQL- 629
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNEL------ERQLKsLERQAEKAErYKELKAELRELELALLVLRLEELREELEELQEELk 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 630 -----LFSHEEELSKLKEDLEiehQINIEKLKDNLGIHYKQQ----IDGLQNEMSQKIETMQFEKDNLITKQNQLILEI- 699
Cdd:TIGR02168 250 eaeeeLEELTAELQELEEKLE---ELRLEVSELEEEIEELQKelyaLANEISRLEQQKQILRERLANLERQLEELEAQLe 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 700 ---SKLKDLQQSLvnsksEEMTLQINELQKEIEILRQEEKEKgtlEQEVQELQLKIELLEKQM---KEKENDLQEKFTQL 773
Cdd:TIGR02168 327 eleSKLDELAEEL-----AELEEKLEELKEELESLEAELEEL---EAELEELESRLEELEEQLetlRSKVAQLELQIASL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 774 EAENSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEIlteenEDLKQQCIQLNEEIEKQRNTFSFA 853
Cdd:TIGR02168 399 NNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEEL-----EELQEELERLEEALEELREELEEA 473
|
330 340 350
....*....|....*....|....*....|...
gi 1622925510 854 EKNFEVNYQELQEEYACLLKVKDDLEDSKNKQE 886
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSE 506
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
166-535 |
1.42e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.77 E-value: 1.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 166 GKQHEIEELNRELEEMrvtygtegLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQL 245
Cdd:TIGR02168 674 ERRREIEELEEKIEEL--------EEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 246 QAsetlrnsTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDftmqisfLQEKIkvyemEQDKKVENSNKEEIQ 325
Cdd:TIGR02168 746 EE-------RIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEE-------LEAQI-----EQLKEELKALREALD 806
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 326 EKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQL----MGTV 401
Cdd:TIGR02168 807 ELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALlnerASLE 886
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 402 EELQKRNHKDSQFETDIvQRMEQEtQRKLEQLRAELDEMYGQqiVQMKQELIRQHVSQM-EELKTRHKGEMENALRSYPN 480
Cdd:TIGR02168 887 EALALLRSELEELSEEL-RELESK-RSELRRELEELREKLAQ--LELRLEGLEVRIDNLqERLSEEYSLTLEEAEALENK 962
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 481 ITVN----EDQIKLMNVAINEL-NIKLqDTNSQKEKLKEELGVILEEKCALQRQLEDLFE 535
Cdd:TIGR02168 963 IEDDeeeaRRRLKRLENKIKELgPVNL-AAIEEYEELKERYDFLTAQKEDLTEAKETLEE 1021
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
3093-3440 |
9.48e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.96 E-value: 9.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3093 LSEIQALHAQMNGRKITLKREQENEKSSQELleyniqqkQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAELRSELAQ 3172
Cdd:COG1196 188 LERLEDILGELERQLEPLERQAEKAERYREL--------KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3173 TKLELETtlkaqhkhlKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAKLGHSE---ERDKEELEDLKF 3249
Cdd:COG1196 260 AELAELE---------AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEerlEELEEELAELEE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3250 SLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQLSEEHGRNLELQVLLESEKVRIREMSSTLDRERELHAQLQ 3329
Cdd:COG1196 331 ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3330 sndgtgqsrpslpseDLLKELQKQLEEKHSRIVELLNETEKyKLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHE 3409
Cdd:COG1196 411 ---------------ALLERLERLEEELEELEEALAELEEE-EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
330 340 350
....*....|....*....|....*....|.
gi 1622925510 3410 LQSKVEDLQRQLEEKRQQVYKLDLEGQRLQG 3440
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEG 505
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
161-949 |
1.13e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.16 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 161 ESELAGKQHEIEELNRELEEMRVTYGTEGLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQI 240
Cdd:PTZ00121 1089 ADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 241 --QFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDftmqisflqekikvYEMEQDKKVEN 318
Cdd:PTZ00121 1169 arKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDA--------------KKAEAVKKAEE 1234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 319 SNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKnmkleltnsKQKERQSSEEIKQlm 398
Cdd:PTZ00121 1235 AKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKK---------KADEAKKAEEKKK-- 1303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 399 gtVEELQKRnhKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQ-QIVQMKQELIRQHVSQMEELKTRHKGEMENALRS 477
Cdd:PTZ00121 1304 --ADEAKKK--AEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAaEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK 1379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 478 YPNITVNEDQIKlmnvAINELNIKLQDTNSQKEKLKEELGvilEEKCAlqrqledlfEELSFSREQIQRARQTI--AEQE 555
Cdd:PTZ00121 1380 ADAAKKKAEEKK----KADEAKKKAEEDKKKADELKKAAA---AKKKA---------DEAKKKAEEKKKADEAKkkAEEA 1443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 556 SKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEvtnykiklemlEKEKNAVLDRMAESQEAELERLRTQllfshEE 635
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE-----------EAKKADEAKKKAEEAKKKADEAKKA-----AE 1507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 636 ELSKLKEDLEIEHQINIEKLKdnlgihykqqidglQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSE 715
Cdd:PTZ00121 1508 AKKKADEAKKAEEAKKADEAK--------------KAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAE 1573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 716 EmtlQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIHT 795
Cdd:PTZ00121 1574 E---DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 796 PDNQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKvK 875
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEN-K 1729
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 876 DDLEDSKNKQELEYKSKLKALNEELHLQRInpTTVKTKSSVFDEDKTFVAETLEMGEVVEKDTTELMEKLEVTK 949
Cdd:PTZ00121 1730 IKAEEAKKEAEEDKKKAEEAKKDEEEKKKI--AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIK 1801
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
508-792 |
1.25e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 1.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 508 QKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLstvedlkaEIVSASESRKELEL 587
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE--------YELLAELARLEQDI 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 588 KHEAE-VTNYKIKLEMLEKEKnAVLDRMAESQEAELERLRTQLlfshEEELSKLKEDLEIEHQInieklkdnlgihyKQQ 666
Cdd:COG1196 305 ARLEErRRELEERLEELEEEL-AELEEELEELEEELEELEEEL----EEAEEELEEAEAELAEA-------------EEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 667 IDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKS--EEMTLQINELQKEIEILRQEEKEKGTLEQE 744
Cdd:COG1196 367 LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLErlERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 745 VQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILK---DEKKALEDMLK 792
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLeelAEAAARLLLLL 497
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
3068-3367 |
1.28e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3068 QRIQEQGVEYQAAMEYLQKADRRSLLSEIQALHAQMNGRKITLKREQENEKSSQELLEYNIQQKQSQMLEMQVELSSMKD 3147
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3148 RATELQEQLSSEKMVVAELRSELAQTKLELETTLKAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQwALE 3227
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE-AEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3228 KEKAKLGHSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQLSEEHGRNLELQVLLESE 3307
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 3308 KVRIREMSSTLDRERELHAQLQS--NDGTGQSRPSLPSEDLLKELQKQLEEKHSRIVELLNE 3367
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAalAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL 516
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
321-1255 |
1.44e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 64.69 E-value: 1.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 321 KEEIQEKETIIEELNTKIIEEEK-------KTLELKDKLTAADKLLGELQEQ---VVQKNQEIK---NMKLELTN----- 382
Cdd:TIGR01612 557 KKLIHEIKKELEEENEDSIHLEKeikdlfdKYLEIDDEIIYINKLKLELKEKiknISDKNEYIKkaiDLKKIIENnnayi 636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 383 ---SKQKERQSSEEIK---QLMGTVE-ELQK---------RNHKDSQFETDIVQRMEQETqrKLEQLRAELDEMYgQQIV 446
Cdd:TIGR01612 637 delAKISPYQVPEHLKnkdKIYSTIKsELSKiyeddidalYNELSSIVKENAIDNTEDKA--KLDDLKSKIDKEY-DKIQ 713
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 447 QMKQELIRQHVSQME-----------ELKTRHKGEMENALrsypNITVNEDQIKLmnvaiNELNIKLQDTNSQKEKLKEE 515
Cdd:TIGR01612 714 NMETATVELHLSNIEnkknelldiivEIKKHIHGEINKDL----NKILEDFKNKE-----KELSNKINDYAKEKDELNKY 784
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 516 LGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTN 595
Cdd:TIGR01612 785 KSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDS 864
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 596 YKIKL-EMLEKEKNAVLDRMAESQEAEL---ERLRTQLLFSHEEELSKLKEDLEIEHQINI-EKLKDNL-GIHYKQQIdg 669
Cdd:TIGR01612 865 EHEQFaELTNKIKAEISDDKLNDYEKKFndsKSLINEINKSIEEEYQNINTLKKVDEYIKIcENTKESIeKFHNKQNI-- 942
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 670 LQNEMSQKIETMQfeKDNLITK------QNQLILEISKL----KDLQQSLVNSKSEEMTLQINELQKEI-----EILRQE 734
Cdd:TIGR01612 943 LKEILNKNIDTIK--ESNLIEKsykdkfDNTLIDKINELdkafKDASLNDYEAKNNELIKYFNDLKANLgknkeNMLYHQ 1020
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 735 EKEKgtlEQEVQELQLKIELLEKQMKEKENDLQEKFTQL--EAENSILKDEKKALEDMLKihtpdNQEERLIFIDSIKSK 812
Cdd:TIGR01612 1021 FDEK---EKATNDIEQKIEDANKNIPNIEIAIHTSIYNIidEIEKEIGKNIELLNKEILE-----EAEINITNFNEIKEK 1092
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 813 SK-----DSVWEKEIEILTEENEdLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDDLEDSKNKQEL 887
Cdd:TIGR01612 1093 LKhynfdDFGKEENIKYADEINK-IKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEEI 1171
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 888 EYKsklkalneelhlQRINPTTVKTKSSVFDEDKTFVAETLEmgevVEKDTTElmekLEVTKREKLELSQRLADL----- 962
Cdd:TIGR01612 1172 EKK------------IENIVTKIDKKKNIYDEIKKLLNEIAE----IEKDKTS----LEEVKGINLSYGKNLGKLfleki 1231
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 963 SEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIIINHNRAGNVqscdTQVSSLSDGVVTMTSRDAEGSVSKVNksf 1042
Cdd:TIGR01612 1232 DEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMET----FNISHDDDKDHHIISKKHDENISDIR--- 1304
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1043 gEESKIMVEDKVSFENMTTGKESKQEQLildhlpsvtkesslraaqpSENDKLQKELNVLKSEQNDLRLQMEAQRIclsl 1122
Cdd:TIGR01612 1305 -EKSLKIIEDFSEESDINDIKKELQKNL-------------------LDAQKHNSDINLYLNEIANIYNILKLNKI---- 1360
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1123 vySTHVDQVREYMeNEKDKALCSLKEELiSAQEEKIKELQKIHQLELQNTKTQETGDeGKPLHLLIGKLRKA----VSEE 1198
Cdd:TIGR01612 1361 --KKIIDEVKEYT-KEIEENNKNIKDEL-DKSEKLIKKIKDDINLEECKSKIESTLD-DKDIDECIKKIKELknhiLSEE 1435
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622925510 1199 CSyfLQTLCSVLGEYYTPALKCEVNAEDRENSGDYTSENE-DSELQDYRYEVQDFQEN 1255
Cdd:TIGR01612 1436 SN--IDTYFKNADENNENVLLLFKNIEMADNKSQHILKIKkDNATNDHDFNINELKEH 1491
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
495-990 |
1.74e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 64.31 E-value: 1.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 495 INELNIKLQDTNSQKEKL---KEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDL 571
Cdd:PRK03918 209 INEISSELPELREELEKLekeVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKEL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 572 KAEIVSASESRKELElKHEAEVTNYKIKLEMLEKEKNAVLDRM--AESQEAELERLRtQLLFSHEEELSKLKEDLEIEHQ 649
Cdd:PRK03918 289 KEKAEEYIKLSEFYE-EYLDELREIEKRLSRLEEEINGIEERIkeLEEKEERLEELK-KKLKELEKRLEELEERHELYEE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 650 I-----NIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTL--QIN 722
Cdd:PRK03918 367 AkakkeELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCgrELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 723 ELQKEiEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLqEKFTQLEAENSILkDEKKALEDMLKIHT-----PD 797
Cdd:PRK03918 447 EEHRK-ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVL-KKESELIKLKELA-EQLKELEEKLKKYNleeleKK 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 798 NQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNE------EIEKQRNTFSF-AEKNFEVNYQELQE---E 867
Cdd:PRK03918 524 AEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDEleeelaELLKELEELGFeSVEELEERLKELEPfynE 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 868 YACLLKVKDDLEDSKNKQELEyKSKLKALNEELhlQRINPTTVKTKSSVFDEDKTFVAETLEMgevVEKDTTELMEKLEV 947
Cdd:PRK03918 604 YLELKDAEKELEREEKELKKL-EEELDKAFEEL--AETEKRLEELRKELEELEKKYSEEEYEE---LREEYLELSRELAG 677
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 1622925510 948 TKREKLELSQRLADLS---EQLKQKHGEISFLNEEVKSLKQEKEQV 990
Cdd:PRK03918 678 LRAELEELEKRREEIKktlEKLKEELEEREKAKKELEKLEKALERV 723
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
2086-2444 |
2.91e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 2.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2086 QQEIQKLEQQLKvvpRFQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVS 2165
Cdd:TIGR02169 680 RERLEGLKRELS---SLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENV 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2166 ADTFQKVEDRKQfgaveakpelSLEVQLQAERDAIDRKEKEItnLEEQLEQFREELENKNEEVQQLHMQL---EIQKKES 2242
Cdd:TIGR02169 757 KSELKELEARIE----------ELEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARLreiEQKLNRL 824
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2243 TTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLfGKFAQIIQEKEVEIDQLNEQIMKLQQQ-LKITTDNKVIEE 2321
Cdd:TIGR02169 825 TLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK-EELEEELEELEAALRDLESRLGDLKKErDELEAQLRELER 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2322 KnelIRDLETQIECLmsdqecvkrnrEEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADslkhqLDMVIAEKLALE 2401
Cdd:TIGR02169 904 K---IEELEAQIEKK-----------RKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS-----LEDVQAELQRVE 964
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1622925510 2402 QQVETTNEEMTFTKNILKETNFKMNQLTQELFSLKRERESMEK 2444
Cdd:TIGR02169 965 EEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
365-776 |
4.06e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.15 E-value: 4.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 365 QVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKrnhkdsqfETDIVQRMEQETQRKLEQLRAELDEmygqq 444
Cdd:TIGR02168 671 SILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEE--------ELEQLRKELEELSRQISALRKDLAR----- 737
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 445 ivqmkqelIRQHVSQMEELKTRHKGEMENAlrsypnitvnEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKC 524
Cdd:TIGR02168 738 --------LEAEVEQLEERIAQLSKELTEL----------EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 525 ALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLstvEDLKAEIVSASESRKELelkhEAEVTNYKIKLEMLE 604
Cdd:TIGR02168 800 ALREALDELRAELTLLNEEAANLRERLESLERRIAATERRL---EDLEEQIEELSEDIESL----AAEIEELEELIEELE 872
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 605 KEKNAVLDRMAESQEAeLERLRTQLLFSHEEELSKLKEDLEIEHQinIEKLKDNLGiHYKQQIDGLQNEMSQKIETM--- 681
Cdd:TIGR02168 873 SELEALLNERASLEEA-LALLRSELEELSEELRELESKRSELRRE--LEELREKLA-QLELRLEGLEVRIDNLQERLsee 948
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 682 -QFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTlqINELQkeIEILRQEEKEKGTLEQEVQELQLKIELLEKQM- 759
Cdd:TIGR02168 949 ySLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGP--VNLAA--IEEYEELKERYDFLTAQKEDLTEAKETLEEAIe 1024
|
410 420
....*....|....*....|
gi 1622925510 760 ---KEKENDLQEKFTQLEAE 776
Cdd:TIGR02168 1025 eidREARERFKDTFDQVNEN 1044
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
508-999 |
6.56e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 6.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 508 QKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSL----STVEDLKAEIVSASESRK 583
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELyalaNEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 584 ELELKHEAevtnYKIKLEMLEKEKNAVLDRMAEsQEAELERLRTQLLfSHEEELSKLKEDLEIEHQINIEKlkdnlgihy 663
Cdd:TIGR02168 313 NLERQLEE----LEAQLEELESKLDELAEELAE-LEEKLEELKEELE-SLEAELEELEAELEELESRLEEL--------- 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 664 KQQIDGLQNEMSQKIETMQfekdnliTKQNQLILEISKLKDLQQSLVNSKSE----EMTLQINELQKEIEILRQEEKEKG 739
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIA-------SLNNEIERLEARLERLEDRRERLQQEieelLKKLEEAELKELQAELEELEEELE 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 740 TLEQEVQELQLKIELLEKQMKEKENDLQekftQLEAENSILKDEKKALEDMLKIHTPDNQEERLIF-------------I 806
Cdd:TIGR02168 451 ELQEELERLEEALEELREELEEAEQALD----AAERELAQLQARLDSLERLQENLEGFSEGVKALLknqsglsgilgvlS 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 807 DSIKSKSKdsvWEKEIEI--------LTEENEDLKQQCIQLNEEIEKQRNTF----SFAEKNFEVNYQELQEEYACLLKV 874
Cdd:TIGR02168 527 ELISVDEG---YEAAIEAalggrlqaVVVENLNAAKKAIAFLKQNELGRVTFlpldSIKGTEIQGNDREILKNIEGFLGV 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 875 KDDLEDSKNKQEL-------------EYKSKLKALNEELHLQRI--------------NPTTVKTKSSVFdEDKTFVAET 927
Cdd:TIGR02168 604 AKDLVKFDPKLRKalsyllggvlvvdDLDNALELAKKLRPGYRIvtldgdlvrpggviTGGSAKTNSSIL-ERRREIEEL 682
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 928 LEMGEVVEKDTTELMEKLEVTKREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEI 999
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSK 754
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
284-784 |
7.73e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.00 E-value: 7.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 284 LEDYQKKKEDFTMQISFLQEKIKVYE--MEQDKKVEN---SNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKL 358
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEkfIKRTENIEElikEKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 359 ---LGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNHKDSQFET-----DIVQRMEQETQRKL 430
Cdd:PRK03918 237 keeIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKlsefyEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 431 EQLRAELDEMYGQ-QIVQMKQELIRQHVSQMEELKtRHKGEMENALRSYPNITVNEDQIKlmnvainelNIKLQDTNSQK 509
Cdd:PRK03918 317 SRLEEEINGIEERiKELEEKEERLEELKKKLKELE-KRLEELEERHELYEEAKAKKEELE---------RLKKRLTGLTP 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 510 EKLKEELGVILEEKcalqrqlEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIvsASESRKELELKH 589
Cdd:PRK03918 387 EKLEKELEELEKAK-------EEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGREL--TEEHRKELLEEY 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 590 EAEVTNYKIKLEMLEKEKNAVLDRMAE-----SQEAELERLRT--QLLFSHEEELSKL-KEDLEIEHQiNIEKLKDNLgI 661
Cdd:PRK03918 458 TAELKRIEKELKEIEEKERKLRKELRElekvlKKESELIKLKElaEQLKELEEKLKKYnLEELEKKAE-EYEKLKEKL-I 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 662 HYKQQIDGLQNEMSqKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQINELQ---KEIEILRQEEKEK 738
Cdd:PRK03918 536 KLKGEIKSLKKELE-KLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEpfyNEYLELKDAEKEL 614
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 1622925510 739 GTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEK 784
Cdd:PRK03918 615 EREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEE 660
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
2044-2272 |
1.03e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.55 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2044 QEKNAELMDLRQQNQALEKQLEKMRKfldeqaidrehERDVFQQEIQKLEQQLKVvprfqpisehQTREVEQLTNHLKEK 2123
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKK-----------EEKALLKQLAALERRIAA----------LARRIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2124 TDKCSELLLSKEQLQRDIQERNEEIEKlefRVRELEQ-------ALLVSADTFQKVEDRKQ-FGAVEAkpelslevQLQA 2195
Cdd:COG4942 82 EAELAELEKEIAELRAELEAQKEELAE---LLRALYRlgrqpplALLLSPEDFLDAVRRLQyLKYLAP--------ARRE 150
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 2196 ERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDA 2272
Cdd:COG4942 151 QAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
160-660 |
1.17e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.62 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 160 MESELAGKQHEIEELNRELEEMRVTygTEGLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQ 239
Cdd:PRK03918 212 ISSELPELREELEKLEKEVKELEEL--KEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELK 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 240 IQFQQLQASETLRNSTHSS------TAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQD 313
Cdd:PRK03918 290 EKAEEYIKLSEFYEEYLDElreiekRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 314 KKVensNKEEIQEKETI--IEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSS 391
Cdd:PRK03918 370 KKE---ELERLKKRLTGltPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 392 EEIKqlmgtvEELQKRNHKdsqfETDIVQRMEQETQRKLEQLRAELDEMygQQIVQMKQELIRQH--VSQMEELKTRHKG 469
Cdd:PRK03918 447 EEHR------KELLEEYTA----ELKRIEKELKEIEEKERKLRKELREL--EKVLKKESELIKLKelAEQLKELEEKLKK 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 470 ----EMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDL-FEELSFSREQI 544
Cdd:PRK03918 515 ynleELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELgFESVEELEERL 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 545 QRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKheaevtnyKIKLEMLEKEKNAVLDRMAESQEAELER 624
Cdd:PRK03918 595 KELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAET--------EKRLEELRKELEELEKKYSEEEYEELRE 666
|
490 500 510
....*....|....*....|....*....|....*....
gi 1622925510 625 LRTQL---LFSHEEELSKLKEDLEiEHQINIEKLKDNLG 660
Cdd:PRK03918 667 EYLELsreLAGLRAELEELEKRRE-EIKKTLEKLKEELE 704
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
425-792 |
1.18e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.62 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 425 ETQRKLEQLRAELDEMYGQ-QIVQMKQELIRQhvsQMEELKT-RHKGEMENALRSypnitvnedqiKLMNVAINELNIKL 502
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENiERLDLIIDEKRQ---QLERLRReREKAERYQALLK-----------EKREYEGYELLKEK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 503 QDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELsfsrEQIQRARQTIAEQESKL--NEAQKSLSTVEDLKAEIVSA-- 578
Cdd:TIGR02169 233 EALERQKEAIERQLASLEEELEKLTEEISELEKRL----EEIEQLLEELNKKIKDLgeEEQLRVKEKIGELEAEIASLer 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 579 SESRKELELKH-EAEVTNYKIKLEMLEKEKNAvLDRMAESQEAELERLRTQLLfSHEEELSKLK---EDLEIEHQINIEK 654
Cdd:TIGR02169 309 SIAEKERELEDaEERLAKLEAEIDKLLAEIEE-LEREIEEERKRRDKLTEEYA-ELKEELEDLRaelEEVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 655 LKDnlgihYKQQIDGLQNEMsqkiETMQFEKDNLITKQNQLILEIS----KLKDLQQSLVNSKSEEMTLQInELQKEIEI 730
Cdd:TIGR02169 387 LKD-----YREKLEKLKREI----NELKRELDRLQEELQRLSEELAdlnaAIAGIEAKINELEEEKEDKAL-EIKKQEWK 456
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 731 LRQEEKEKGTLEQEVQELQLKIELLEKQMKEkendLQEKFTQLEAENSILKDE---KKALEDMLK 792
Cdd:TIGR02169 457 LEQLAADLSKYEQELYDLKEEYDRVEKELSK----LQRELAEAEAQARASEERvrgGRAVEEVLK 517
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
267-1075 |
1.28e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 61.61 E-value: 1.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 267 KQQIRTHQQQLEEQDHLLEDYQKKKEDFtmqISFLQEKIKVYEMEQDKKVENSNKEEIQEK-ETIIEELNTK--IIEEEK 343
Cdd:TIGR01612 1117 KDDIKNLDQKIDHHIKALEEIKKKSENY---IDEIKAQINDLEDVADKAISNDDPEEIEKKiENIVTKIDKKknIYDEIK 1193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 344 KTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKerQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRME 423
Cdd:TIGR01612 1194 KLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEKK--KSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMD 1271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 424 QETQRKLEQLRAELDEMY-------GQQIVQMKQELIR--QHVSQMEELKTRHKGEMENALRSYPNitvNEDQIKLMNVA 494
Cdd:TIGR01612 1272 IKAEMETFNISHDDDKDHhiiskkhDENISDIREKSLKiiEDFSEESDINDIKKELQKNLLDAQKH---NSDINLYLNEI 1348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 495 INELNI-KLQDTNSQKEKLKEELGVILEEKcalqrqlEDLFEELSFSREQIQRARQTIAEQESKlneaQKSLSTVE--DL 571
Cdd:TIGR01612 1349 ANIYNIlKLNKIKKIIDEVKEYTKEIEENN-------KNIKDELDKSEKLIKKIKDDINLEECK----SKIESTLDdkDI 1417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 572 KAEIVSASESRKELeLKHEAEVTNYKIKLEmlEKEKNAVLD----RMAESQEAELERLRTQLLFS-HEEELSKLKEDLEI 646
Cdd:TIGR01612 1418 DECIKKIKELKNHI-LSEESNIDTYFKNAD--ENNENVLLLfkniEMADNKSQHILKIKKDNATNdHDFNINELKEHIDK 1494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 647 EHQINIEKLKDNLGI--------HYKQQIDGLQNEMSQKIETMQFEKDNliTKQNQLILEISKLKDlQQSLVNSKSEEmt 718
Cdd:TIGR01612 1495 SKGCKDEADKNAKAIeknkelfeQYKKDVTELLNKYSALAIKNKFAKTK--KDSEIIIKEIKDAHK-KFILEAEKSEQ-- 1569
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 719 lQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQM------KEKENDLQEKFTQLEAENSILKDEKKALEdmLK 792
Cdd:TIGR01612 1570 -KIKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFlkisdiKKKINDCLKETESIEKKISSFSIDSQDTE--LK 1646
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 793 iHTPDNQEERLIFIDSIKSKSKDSvwekeieilteenEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYAcll 872
Cdd:TIGR01612 1647 -ENGDNLNSLQEFLESLKDQKKNI-------------EDKKKELDELDSEIEKIEIDVDQHKKNYEIGIIEKIKEIA--- 1709
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 873 kvkddledSKNKQELEYKSKLkalneelhlqrINPTTVKTKSSVFDEDktfvAETLEMGEVVEKDTTELMEKLEvtkrEK 952
Cdd:TIGR01612 1710 --------IANKEEIESIKEL-----------IEPTIENLISSFNTND----LEGIDPNEKLEEYNTEIGDIYE----EF 1762
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 953 LELSQRLADLSEQLKQ--------KHGEISFLNEEVKSLKQEKEQVL----LRCRELEIIINHNRagnvqscdtqvSSLS 1020
Cdd:TIGR01612 1763 IELYNIIAGCLETVSKepitydeiKNTRINAQNEFLKIIEIEKKSKSylddIEAKEFDRIINHFK-----------KKLD 1831
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 1021 DGVVTMTSRdaegsVSKVNKSFGEESKimvedkvSFENMttgKESKQEQLILDHL 1075
Cdd:TIGR01612 1832 HVNDKFTKE-----YSKINEGFDDISK-------SIENV---KNSTDENLLFDIL 1871
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
330-1002 |
1.59e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.80 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 330 IIEELNTKIIEEEKKTLELK-------DKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVE 402
Cdd:TIGR04523 27 IANKQDTEEKQLEKKLKTIKnelknkeKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 403 ELqkrnhkDSQFETDIVQRMEQETQ-RKLEQLRAELDEmygqQIVQMKQELIRQHvSQMEELKTRHKgEMENALRSYpni 481
Cdd:TIGR04523 107 KI------NSEIKNDKEQKNKLEVElNKLEKQKKENKK----NIDKFLTEIKKKE-KELEKLNNKYN-DLKKQKEEL--- 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 482 tvnEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVI---LEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKL 558
Cdd:TIGR04523 172 ---ENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLkkkIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 559 NEAQKSLSTVEDLKAEIVSaSESRKELELKH--------EAEVTNYKIKLEMLEKEKNAVLDRMA----ESQEAELERLR 626
Cdd:TIGR04523 249 SNTQTQLNQLKDEQNKIKK-QLSEKQKELEQnnkkikelEKQLNQLKSEISDLNNQKEQDWNKELkselKNQEKKLEEIQ 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 627 TQLLFShEEELSKLKEDLEiehqiNIEKLKDNLGIHyKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLkdlq 706
Cdd:TIGR04523 328 NQISQN-NKIISQLNEQIS-----QLKKELTNSESE-NSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDL---- 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 707 qslvNSKSEEMTLQINELQKEIEILrqeEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKA 786
Cdd:TIGR04523 397 ----ESKIQNQEKLNQQKDEQIKKL---QQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 787 LEDMLKIhtpdnqeerlifIDSIKSKSKDSVWE-----KEIEILTEENEDLKQQCIQLNEEIEKQRNTfsfaEKNFEVNY 861
Cdd:TIGR04523 470 LKVLSRS------------INKIKQNLEQKQKElkskeKELKKLNEEKKELEEKVKDLTKKISSLKEK----IEKLESEK 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 862 QELQEEYACLLKVKDDLEDSKNKQELEykSKLKALNEELHLQRINPTTVKTKSSVFDED-KTFVAETLEMGEVVEKDTT- 939
Cdd:TIGR04523 534 KEKESKISDLEDELNKDDFELKKENLE--KEIDEKNKEIEELKQTQKSLKKKQEEKQELiDQKEKEKKDLIKEIEEKEKk 611
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 940 --ELMEKLEVTKREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIIIN 1002
Cdd:TIGR04523 612 isSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKID 676
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
215-945 |
1.62e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 215 QQARREKDETMREFLELTEQSQ-------KLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQ-QQLEEQDHLLED 286
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEARmahfarrQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEaKKKAEEAKKADE 1319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 287 YQKKKEDFTMQISFLQEKikvyeMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQ--E 364
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKK-----AEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKkaD 1394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 365 QVVQKNQEIKNmKLELTNSKQKERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQ 444
Cdd:PTZ00121 1395 EAKKKAEEDKK-KADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKAD 1473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 445 IVQMKQELIRQhvsqMEELKtrhKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKc 524
Cdd:PTZ00121 1474 EAKKKAEEAKK----ADEAK---KKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEK- 1545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 525 alqRQLEDLFEElsfsrEQIQRARQTIAEQESKLNEAQKSLSTvedLKAEIVSASESRKELELKHEAEvTNYKIKLEMLE 604
Cdd:PTZ00121 1546 ---KKADELKKA-----EELKKAEEKKKAEEAKKAEEDKNMAL---RKAEEAKKAEEARIEEVMKLYE-EEKKMKAEEAK 1613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 605 KEKNAVLdRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKlkdnlgihyKQQIDGLQNEMSQKIETMQFE 684
Cdd:PTZ00121 1614 KAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK---------AAEEAKKAEEDKKKAEEAKKA 1683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 685 KDNLITKQNQLILEISKLKdlqqslvnsKSEEMTLQINELQKEIEILRQEEKEKGT----LEQEVQELQLKIELLEKQMK 760
Cdd:PTZ00121 1684 EEDEKKAAEALKKEAEEAK---------KAEELKKKEAEEKKKAEELKKAEEENKIkaeeAKKEAEEDKKKAEEAKKDEE 1754
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 761 EKENDLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSV-----------WEKEIEIlTEEN 829
Cdd:PTZ00121 1755 EKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIeggkegnlvinDSKEMED-SAIK 1833
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 830 EDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQElqeeyACLLKVKDDLEDskNKQELEYKSKLKALNEELHLQRINPTT 909
Cdd:PTZ00121 1834 EVADSKNMQLEEADAFEKHKFNKNNENGEDGNKE-----ADFNKEKDLKED--DEEEIEEADEIEKIDKDDIEREIPNNN 1906
|
730 740 750
....*....|....*....|....*....|....*.
gi 1622925510 910 VKTKSSVFDEDKtfvaetLEMGEVVEKDTTELMEKL 945
Cdd:PTZ00121 1907 MAGKNNDIIDDK------LDKDEYIKRDAEETREEI 1936
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
304-857 |
1.73e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 60.89 E-value: 1.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 304 KIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNS 383
Cdd:pfam05483 102 KQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREET 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 384 KQKERQSSEEIKQLMGTVEELQKRN-------HKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQqiVQMKQELIRQH 456
Cdd:pfam05483 182 RQVYMDLNNNIEKMILAFEELRVQAenarlemHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQ--ITEKENKMKDL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 457 VSQMEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEE 536
Cdd:pfam05483 260 TFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEE 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 537 LSFSREQ----IQRARQTIAEQESKLNEAQKSLSTVEDlKAEIVSASESRKELELKHEAEVTNYKiKLEMLEKEKNAVLD 612
Cdd:pfam05483 340 LNKAKAAhsfvVTEFEATTCSLEELLRTEQQRLEKNED-QLKIITMELQKKSSELEEMTKFKNNK-EVELEELKKILAED 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 613 RMAESQEAELERLRTQLLFSHEEELSKL----KEDLEIEHQINIEKLKDNlgiHYKQQIDGLQNEMSQ---KIETMQFEK 685
Cdd:pfam05483 418 EKLLDEKKQFEKIAEELKGKEQELIFLLqareKEIHDLEIQLTAIKTSEE---HYLKEVEDLKTELEKeklKNIELTAHC 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 686 DNLITKQNQLILEIS----KLKDLQQSLVNSKSEE--MTLQINELQKEIEILRQE-EKEKGTLEQEVQELQLKIELLEKQ 758
Cdd:pfam05483 495 DKLLLENKELTQEASdmtlELKKHQEDIINCKKQEerMLKQIENLEEKEMNLRDElESVREEFIQKGDEVKCKLDKSEEN 574
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 759 MKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQ 838
Cdd:pfam05483 575 ARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEE 654
|
570
....*....|....*....
gi 1622925510 839 LNEEIEKQRNTFSFAEKNF 857
Cdd:pfam05483 655 IIDNYQKEIEDKKISEEKL 673
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
555-1163 |
1.74e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.11 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 555 ESKLNEAQKSLSTVEDLKAEIvsasesRKELE-LKHEAEVTN--YKIKLEMLEKEKNAVLDRMaESQEAELERLRTQLLf 631
Cdd:COG1196 178 ERKLEATEENLERLEDILGEL------ERQLEpLERQAEKAEryRELKEELKELEAELLLLKL-RELEAELEELEAELE- 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 632 SHEEELSKLKEDLEiEHQINIEKLKdnlgihykQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLvn 711
Cdd:COG1196 250 ELEAELEELEAELA-ELEAELEELR--------LELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERL-- 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 712 sksEEMTLQINELQKEIEILRQE----EKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENS-ILKDEKKA 786
Cdd:COG1196 319 ---EELEEELAELEEELEELEEEleelEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEeLLEALRAA 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 787 LEDMLKIHTPDNQEERLIfIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNtfsfAEKNFEVNYQELQE 866
Cdd:COG1196 396 AELAAQLEELEEAEEALL-ERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE----EEEALLELLAELLE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 867 EYACLLKVKDDLEDSKNKQELEYKSKLKAlnEELHLQRINPTTVKTKSSVFDEDKTFVAETLEMGEVVEKDTTELMEKLE 946
Cdd:COG1196 471 EAALLEAALAELLEELAEAAARLLLLLEA--EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAL 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 947 VTKRekLELSQRLADLSEQLKQ-KHGEISFL-----------NEEVKSLKQEKEQVLLRCRELEIIINHNRAGNVQSCDT 1014
Cdd:COG1196 549 QNIV--VEDDEVAAAAIEYLKAaKAGRATFLpldkiraraalAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRT 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1015 QVSSLSD-GVVTMTSRDAEGSVSKVNKSFGEESKIMVEDKVSFENMTTGKESKQEQLILDHLPSVTKESSLRAAQPSEND 1093
Cdd:COG1196 627 LVAARLEaALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE 706
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1094 KLQKELNVLKSEQNDLRLQMEAQRicLSLVYSTHVDQVREYMENEKDKALCSLKEELISAQEEKIKELQK 1163
Cdd:COG1196 707 RELAEAEEERLEEELEEEALEEQL--EAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLER 774
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
190-998 |
2.67e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.47 E-value: 2.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 190 LQQLQEFEAAIKQRDGIITQLTANLQQARREKDETmrefleltEQSQKLQIQFQQLQASETLRnsthsstaadllqakqQ 269
Cdd:TIGR02169 176 LEELEEVEENIERLDLIIDEKRQQLERLRREREKA--------ERYQALLKEKREYEGYELLK----------------E 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 270 IRTHQQQLEEQDHLLEDYQKKKEDFTMQISflqekikvyemeqdkkvenSNKEEIQEKETIIEELNTKIIEE-EKKTLEL 348
Cdd:TIGR02169 232 KEALERQKEAIERQLASLEEELEKLTEEIS-------------------ELEKRLEEIEQLLEELNKKIKDLgEEEQLRV 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 349 KDKLtaadkllGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRnhkdsqfetdivqrmEQETQR 428
Cdd:TIGR02169 293 KEKI-------GELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELERE---------------IEEERK 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 429 KLEQLRAELDEmygqqivqmKQELIRQHVSQMEELKTRHKgemenalrsypnitvnedqiklmnvainELNIKLQDTNSQ 508
Cdd:TIGR02169 351 RRDKLTEEYAE---------LKEELEDLRAELEEVDKEFA----------------------------ETRDELKDYREK 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 509 KEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELK 588
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 589 HEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLRTQLLF------------------------------------- 631
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLkasiqgvhgtvaqlgsvgeryataievaagnrlnnvv 553
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 632 -------------------------------SHEEELSKLKEDLEIEHQIN------------------------IEKLK 656
Cdd:TIGR02169 554 veddavakeaiellkrrkagratflplnkmrDERRDLSILSEDGVIGFAVDlvefdpkyepafkyvfgdtlvvedIEAAR 633
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 657 DNLGIHYKQQIDG---------------------LQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLvNSKSE 715
Cdd:TIGR02169 634 RLMGKYRMVTLEGelfeksgamtggsraprggilFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDEL-SQELS 712
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 716 EMTLQINELQKEIEIL-RQEEKEKGTLEQ---EVQELQLKIELLEKQMKEKENDLQEKFTQLEAensiLKDEKKALEDML 791
Cdd:TIGR02169 713 DASRKIGEIEKEIEQLeQEEEKLKERLEEleeDLSSLEQEIENVKSELKELEARIEELEEDLHK----LEEALNDLEARL 788
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 792 KIHTPDN--------------QEERLIFIDSIKSKS--KDSVWEKEIEILTEENEDLKQQCIQLNEEIE---KQRNTFSF 852
Cdd:TIGR02169 789 SHSRIPEiqaelskleeevsrIEARLREIEQKLNRLtlEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEnlnGKKEELEE 868
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 853 AEKNFEVNYQELQEEYACLLKVKDDLEdsknKQELEYKSKLKALNEELHLQRINPTTVKTK-SSVFDEDKTFVAETLEMG 931
Cdd:TIGR02169 869 ELEELEAALRDLESRLGDLKKERDELE----AQLRELERKIEELEAQIEKKRKRLSELKAKlEALEEELSEIEDPKGEDE 944
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 932 EVVEKDTTElmEKLEVTKREKLELSQRLADLS----EQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELE 998
Cdd:TIGR02169 945 EIPEEELSL--EDVQAELQRVEEEIRALEPVNmlaiQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYE 1013
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1883-2431 |
3.06e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.03 E-value: 3.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1883 ESFRQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQELLcasnRLQ 1962
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLL----KLE 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1963 ELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKV------RDDLQKQVKALEIDVEEQV 2036
Cdd:TIGR04523 201 LLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLnqlkdeQNKIKKQLSEKQKELEQNN 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2037 SRFIELE---QEKNAELMDLRQQ-NQALEKQLEKMRKFLDEQAIDREHERDVFQQEIQKLEQQLKVVPRfqpISEHQTRE 2112
Cdd:TIGR04523 281 KKIKELEkqlNQLKSEISDLNNQkEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKK---ELTNSESE 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2113 VEQLTNHLKEKTDKCselllskEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQfgaVEAKPELSLEVQ 2192
Cdd:TIGR04523 358 NSEKQRELEEKQNEI-------EKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIK---KLQQEKELLEKE 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2193 LQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLgLAIKESDA 2272
Cdd:TIGR04523 428 IERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKEL-KKLNEEKK 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2273 VSTQDQHVLFGKFAQIIQ----------EKEVEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQEc 2342
Cdd:TIGR04523 507 ELEEKVKDLTKKISSLKEkieklesekkEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQE- 585
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2343 vkrNREEEIEQLNEVIEKLQQELANIGQKTLvdahSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKETN 2422
Cdd:TIGR04523 586 ---EKQELIDQKEKEKKDLIKEIEEKEKKIS----SLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
....*....
gi 1622925510 2423 FKMNQLTQE 2431
Cdd:TIGR04523 659 NKWPEIIKK 667
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1882-2254 |
3.21e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.08 E-value: 3.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1882 RESFRQKQEATESLK-----CQEDLRE---RLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQE 1953
Cdd:TIGR02169 673 PAELQRLRERLEGLKrelssLQSELRRienRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1954 LLCASNRLQELEAEQqqiqeerELLSRQKEAMKAEAGPVEQQLLQEteklmkeklevqcQAEKVRDDLQKqvkaLEIDVE 2033
Cdd:TIGR02169 753 IENVKSELKELEARI-------EELEEDLHKLEEALNDLEARLSHS-------------RIPEIQAELSK----LEEEVS 808
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2034 EQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKfLDEQAIDREHERDVFQQEIQKLEQQLKvvprfqpisEHQTrEV 2113
Cdd:TIGR02169 809 RIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRID-LKEQIKSIEKEIENLNGKKEELEEELE---------ELEA-AL 877
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2114 EQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAKPELSLEvQL 2193
Cdd:TIGR02169 878 RDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLE-DV 956
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 2194 QAERDAIdrkEKEITNLEE----QLEQFREELENKNeEVQQLHMQLEIQKKESTTRLQELEQENK 2254
Cdd:TIGR02169 957 QAELQRV---EEEIRALEPvnmlAIQEYEEVLKRLD-ELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1616-2409 |
5.67e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 5.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1616 RQMERQREDQEQLQEEIKRLNKQLaqrSSIDNENLVSERERVLLEELEALKQLSLAGREKLCCELRNSSTQTQNGNENQG 1695
Cdd:TIGR02168 179 RKLERTRENLDRLEDILNELERQL---KSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1696 EAEEQTFKEKELDRkpehvppEILSNERYALQKANNRLLKILLEVVKTTAAVEETIGRHVlgiLDRSSKSQSSASLIWRS 1775
Cdd:TIGR02168 256 EELTAELQELEEKL-------EELRLEVSELEEEIEELQKELYALANEISRLEQQKQILR---ERLANLERQLEELEAQL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1776 EAEASVKSCVHEEHTRVTDEsipsysgSDMPRNDINMWSKVTEEGTELSQRLVRsgfagTEIDPENEelvlniSSRLQAA 1855
Cdd:TIGR02168 326 EELESKLDELAEELAELEEK-------LEELKEELESLEAELEELEAELEELES-----RLEELEEQ------LETLRSK 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1856 VEKLLEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDLreRLHEESRAREQLAVELSKAEGVIDGYADEKTL 1935
Cdd:TIGR02168 388 VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA--ELKELQAELEELEEELEELQEELERLEEALEE 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1936 FERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAG--PVEQQLLQETEKLMKEkLEVQCQ 2013
Cdd:TIGR02168 466 LREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGilGVLSELISVDEGYEAA-IEAALG 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2014 AEK---VRDDLQKQVKALEIDVEEQVSR--FIELEQEKNAELmdlrqqNQALEKQLEKMRKFLDeQAIDREHERDVFQQE 2088
Cdd:TIGR02168 545 GRLqavVVENLNAAKKAIAFLKQNELGRvtFLPLDSIKGTEI------QGNDREILKNIEGFLG-VAKDLVKFDPKLRKA 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2089 IQKLEQQLKVVPRFQ------PISEHQTREV----EQLTNH--LKEKTDKCSELLLSKeqlQRDIQERNEEIEKLEFRVR 2156
Cdd:TIGR02168 618 LSYLLGGVLVVDDLDnalelaKKLRPGYRIVtldgDLVRPGgvITGGSAKTNSSILER---RREIEELEEKIEELEEKIA 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2157 ELEQALlvsADTFQKVEDRKQFGAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLE 2236
Cdd:TIGR02168 695 ELEKAL---AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2237 IQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQ--DQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKITT 2314
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEltLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS 851
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2315 DNkvIEEKNELIRDLETQIECLMSDQECV---KRNREEEIEQLNEVIEKLQQELANIGQKtlvdAHSLPEEADSLKHQLD 2391
Cdd:TIGR02168 852 ED--IESLAAEIEELEELIEELESELEALlneRASLEEALALLRSELEELSEELRELESK----RSELRRELEELREKLA 925
|
810
....*....|....*...
gi 1622925510 2392 MVIAEKLALEQQVETTNE 2409
Cdd:TIGR02168 926 QLELRLEGLEVRIDNLQE 943
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1851-2231 |
6.65e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 6.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1851 RLQAAVEKLLEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYA 1930
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1931 DEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEV 2010
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRL 840
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2011 QcQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKfLDEQAIDREHERDVFQQEIQ 2090
Cdd:TIGR02168 841 E-DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE-LSEELRELESKRSELRRELE 918
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2091 KLEQQLkvvprfqpiSEHQTREvEQLTNHLKEKTDKCSELL-LSKEQLQRDIQERNEEIEKLEFRVRELEQAL------- 2162
Cdd:TIGR02168 919 ELREKL---------AQLELRL-EGLEVRIDNLQERLSEEYsLTLEEAEALENKIEDDEEEARRRLKRLENKIkelgpvn 988
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2163 LVSADTFQKVEDRKQFgaveakpelsLEVQLQAERDAIDRKEKEITNL-EEQLEQFREELENKNEEVQQL 2231
Cdd:TIGR02168 989 LAAIEEYEELKERYDF----------LTAQKEDLTEAKETLEEAIEEIdREARERFKDTFDQVNENFQRV 1048
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
170-810 |
6.78e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 59.21 E-value: 6.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 170 EIEELNRELEEMRVTYgtEGLQQLQEFEAAIKQRDGIITQLTANLQQAR---------REKDETMREFLELTEQS----- 235
Cdd:TIGR00618 227 ELKHLREALQQTQQSH--AYLTQKREAQEEQLKKQQLLKQLRARIEELRaqeavleetQERINRARKAAPLAAHIkavtq 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 236 --QKLQIQFQQLQASETLRNSTHSSTAAdlLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDftMQISFLQEKIKVYEMEQD 313
Cdd:TIGR00618 305 ieQQAQRIHTELQSKMRSRAKLLMKRAA--HVKQQSSIEEQRRLLQTLHSQEIHIRDAHE--VATSIREISCQQHTLTQH 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 314 KKVENSNKEEIQEKETIIEELNTKIIEEEKKTL-------ELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSK-- 384
Cdd:TIGR00618 381 IHTLQQQKTTLTQKLQSLCKELDILQREQATIDtrtsafrDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKih 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 385 -QKERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMY-----GQQIVQMKQELIRQHVS 458
Cdd:TIGR00618 461 lQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQdidnpGPLTRRMQRGEQTYAQL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 459 QMEELKTRHKG--EMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEK----CALQRQLED 532
Cdd:TIGR00618 541 ETSEEDVYHQLtsERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEdmlaCEQHALLRK 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 533 LFEELSfsrEQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLD 612
Cdd:TIGR00618 621 LQPEQD---LQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 613 RMAESQEAelerlrTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHyKQQIDGLQNEMSQKIETMQFEKDNLITKQ 692
Cdd:TIGR00618 698 MLAQCQTL------LRELETHIEEYDREFNEIENASSSLGSDLAAREDAL-NQSLKELMHQARTVLKARTEAHFNNNEEV 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 693 NQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQ 772
Cdd:TIGR00618 771 TAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQ 850
|
650 660 670
....*....|....*....|....*....|....*...
gi 1622925510 773 LEAENSILKDEKKALEDMLKIHTpdnQEERLIFIDSIK 810
Cdd:TIGR00618 851 LLKYEECSKQLAQLTQEQAKIIQ---LSDKLNGINQIK 885
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
2110-2760 |
7.71e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.49 E-value: 7.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2110 TREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEdrkqfgaveaKPELSL 2189
Cdd:TIGR04523 39 EKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLN----------SDLSKI 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2190 EVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEI---QKKESTTRLQELEQENKLFKDDMEKLGLA 2266
Cdd:TIGR04523 109 NSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKlnnKYNDLKKQKEELENELNLLEKEKLNIQKN 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2267 IKESDAVSTQDQHVLFgkfaqIIQEKEVEIDQLNEQIMKLQQQLKITTDNkvIEEKNELIRDLETQIECLMSDQECVKRN 2346
Cdd:TIGR04523 189 IDKIKNKLLKLELLLS-----NLKKKIQKNKSLESQISELKKQNNQLKDN--IEKKQQEINEKTTEISNTQTQLNQLKDE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2347 REEEIEQLNEVIEKLQQELANIGQKTlVDAHSLPEEADSLKHQLDMVIAEKlaLEQQVETTNEEMTFTKNILKETNFKMN 2426
Cdd:TIGR04523 262 QNKIKKQLSEKQKELEQNNKKIKELE-KQLNQLKSEISDLNNQKEQDWNKE--LKSELKNQEKKLEEIQNQISQNNKIIS 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2427 QLTQELFSLKRERESMEkiqsipgkSVNMAIDDMSKDKPELEVVLTEDALKSLENQTYLKSFEENGKGSIINLETRLLQL 2506
Cdd:TIGR04523 339 QLNEQISQLKKELTNSE--------SENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQK 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2507 ESTVRAKDLELTQCYKQIKDMQEQ---GQSEIEVLQKKILNLQKILEEKVAAALVSQIQLEAVQEYAKFCQDNQTISSEP 2583
Cdd:TIGR04523 411 DEQIKKLQQEKELLEKEIERLKETiikNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2584 ERTNIQNLNQLRE---------DESGSNISALTLRISELESQLVEMHTSLILGKEQVEIAEKNVLEKEKKLLELQKLLEG 2654
Cdd:TIGR04523 491 LKSKEKELKKLNEekkeleekvKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEI 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2655 NEKKQGGKERKRSPQDFEVLKTTTElfhsNEESGFLNELEALRAESVATKAQLTGYKEKTEKLQGELLIKETNMASLQKD 2734
Cdd:TIGR04523 571 EELKQTQKSLKKKQEEKQELIDQKE----KEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQE 646
|
650 660
....*....|....*....|....*.
gi 1622925510 2735 LSQVRDHLAEAKEKLSILEKEDKTAV 2760
Cdd:TIGR04523 647 VKQIKETIKEIRNKWPEIIKKIKESK 672
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
2040-2553 |
7.84e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.49 E-value: 7.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2040 IELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQaidreherdvfQQEIQKLEQQLKVvprfqpISEHQTREVEQLTNH 2119
Cdd:TIGR04523 210 IQKNKSLESQISELKKQNNQLKDNIEKKQQEINEK-----------TTEISNTQTQLNQ------LKDEQNKIKKQLSEK 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2120 LKEktdkcselllsKEQLQRDIQERNEEIEKLEFRVRELEQallvsadtfQKVEDRKQfgavEAKPEL-SLEVQLQAERD 2198
Cdd:TIGR04523 273 QKE-----------LEQNNKKIKELEKQLNQLKSEISDLNN---------QKEQDWNK----ELKSELkNQEKKLEEIQN 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2199 AIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEiqkkESTTRLQELEQENKLFKDDMEKLGLAIKESDAvSTQDQ 2278
Cdd:TIGR04523 329 QISQNNKIISQLNEQISQLKKELTNSESENSEKQRELE----EKQNEIEKLKKENQSYKQEIKNLESQINDLES-KIQNQ 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2279 HVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQlkITTDNKVIEEKNELIRDLETQIECLmsdqECVKRNREEEIEQLNEVI 2358
Cdd:TIGR04523 404 EKLNQQKDEQIKKLQQEKELLEKEIERLKET--IIKNNSEIKDLTNQDSVKELIIKNL----DNTRESLETQLKVLSRSI 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2359 EKLQQELANIGQktlvdahslpeEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQELFSLKRE 2438
Cdd:TIGR04523 478 NKIKQNLEQKQK-----------ELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDE 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2439 RESMEkiqsipgksvnmaiDDMSKDKPELEVVLTEDALKSL-ENQTYLKSFEENGKGSIINLETRLLQLESTVRAKDLEL 2517
Cdd:TIGR04523 547 LNKDD--------------FELKKENLEKEIDEKNKEIEELkQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKI 612
|
490 500 510
....*....|....*....|....*....|....*.
gi 1622925510 2518 TQCYKQIKDMQEQgQSEIEVLQKKILNLQKILEEKV 2553
Cdd:TIGR04523 613 SSLEKELEKAKKE-NEKLSSIIKNIKSKKNKLKQEV 647
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
302-1173 |
9.54e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 58.44 E-value: 9.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 302 QEKIKVYEMEQDKKVENSNKEEIQ-EKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLEL 380
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIiDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQEL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 381 TNSKQKERQSSeeiKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMygQQIVQMKQELIRQ---HV 457
Cdd:pfam02463 246 LRDEQEEIESS---KQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL--LKLERRKVDDEEKlkeSE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 458 SQMEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGvilEEKCALQRQLEDLFEEL 537
Cdd:pfam02463 321 KEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK---LESERLSSAAKLKEEEL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 538 SFsREQIQRARQTIAEQESKLNEAQKSLSTVEdlkAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAES 617
Cdd:pfam02463 398 EL-KSEEEKEAQLLLELARQLEDLLKEEKKEE---LEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDL 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 618 QEAELErlrTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQ-NQLI 696
Cdd:pfam02463 474 LKETQL---VKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAIsTAVI 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 697 LEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAE 776
Cdd:pfam02463 551 VEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILK 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 777 NSILKDEKKALEDMLKIHTPDNQEERLIFidsIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKN 856
Cdd:pfam02463 631 DTELTKLKESAKAKESGLRKGVSLEEGLA---EKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQR 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 857 FEVNYQELQEEYACLLKVKDDLEDSKNKQE---LEYKSKLKALNEELHLQRINPTTVKTKSSVFDEDKTFVAETLEMGEV 933
Cdd:pfam02463 708 EKEELKKLKLEAEELLADRVQEAQDKINEElklLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLK 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 934 VEKDTTELMEKLEVTKREKLELSQRLADLSEQLkQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIIINHNRAGNVQSCD 1013
Cdd:pfam02463 788 VEEEKEEKLKAQEEELRALEEELKEEAELLEEE-QLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKE 866
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1014 TQVSSLSDGVVTMTSRDAEgSVSKVNKSFGEESKIMVEDKVSFENMTTGKESKQEQLILDHLPSVTKESSLRAAQPSEND 1093
Cdd:pfam02463 867 ELLQELLLKEEELEEQKLK-DELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEA 945
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1094 KLQKELNVLKSEQNDLRLQMEAQRICLSLVystHVDQVREYMENEKDKAlcSLKEELISAQEEKIKELQKIHQLELQNTK 1173
Cdd:pfam02463 946 DEKEKEENNKEEEEERNKRLLLAKEELGKV---NLMAIEEFEEKEERYN--KDELEKERLEEEKKKLIRAIIEETCQRLK 1020
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
574-1361 |
1.32e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 58.06 E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 574 EIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQ----EAELERLRTQLLFSHEEELSKLKEDLEIEHQ 649
Cdd:pfam02463 145 EIIAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIidleELKLQELKLKEQAKKALEYYQLKEKLELEEE 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 650 INIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDN---LITKQNQLILEISKLKDLQQSLVNSKSEEMTLQINELQK 726
Cdd:pfam02463 225 YLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKeeeKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLK 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 727 EIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSIlKDEKKALEDMLKIHTPDNQEERLIFI 806
Cdd:pfam02463 305 LERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEE-EEELEKLQEKLEQLEEELLAKKKLES 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 807 DSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDDLEDSKNKQE 886
Cdd:pfam02463 384 ERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKD 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 887 LEYKSKLKALneelhLQRINPTTVKTKSSVFDEDKTFVAETLEMGEVVEKDTTELMEKLEVTKREKLELSQRLADLSEQL 966
Cdd:pfam02463 464 ELELKKSEDL-----LKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAV 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 967 -KQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIIINHNRAGNVQSCDTQVSSLSDGVVTMTSRDAEGSVSKVNKSFGEE 1045
Cdd:pfam02463 539 eNYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADED 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1046 SKIMVEDKVSFENMTTGKE---SKQEQLILDHLPSVTKESSLRAAQPSENDKLQKELNVLKSEQNDLRLQMEAQRICLSL 1122
Cdd:pfam02463 619 DKRAKVVEGILKDTELTKLkesAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQ 698
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1123 VYSTHVDQVREYMENEKDKALCSLKEELISAQEEKIKELQKIHQlelqntktQETGDEGKPLHLLIGKLRKAVSEECSYF 1202
Cdd:pfam02463 699 LEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLK--------QKIDEEEEEEEKSRLKKEEKEEEKSELS 770
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1203 LQTLCSVLGEYYTPALKCEVNAEDRENSGDyTSENEDSELQDYRYEVQDFQENMHTLLNKVTEEYNKLLVLQTRLSkiwg 1282
Cdd:pfam02463 771 LKEKELAEEREKTEKLKVEEEKEEKLKAQE-EELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEE---- 845
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 1283 qQTDGMKLEFGEENLPKEETKFLSIHSQMTSLEDSDVNHKSKLSSLQHLEKTEQLEEQVQELESLISSLQQQLKETEQS 1361
Cdd:pfam02463 846 -QKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERI 923
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
505-835 |
1.47e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 57.83 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 505 TNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSR---EQIQRARQTiaEQESKLNEAQKSLSTVEDLKAEIVsASES 581
Cdd:pfam17380 264 TMTENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERlrqEKEEKAREV--ERRRKLEEAEKARQAEMDRQAAIY-AEQE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 582 RKELELKHEAE---VTNYKIKLEMLEKEKNAV-LDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKD 657
Cdd:pfam17380 341 RMAMERERELErirQEERKRELERIRQEEIAMeISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 658 NLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKdlQQSLVNSKSEEMTLQINELQKEIEILRQE--E 735
Cdd:pfam17380 421 EMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLR--QQEEERKRKKLELEKEKRDRKRAEEQRRKilE 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 736 KEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILK----DEKKALEDMLKIHTpdnqEERlifidsiks 811
Cdd:pfam17380 499 KELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKqqemEERRRIQEQMRKAT----EER--------- 565
|
330 340
....*....|....*....|....
gi 1622925510 812 kSKDSVWEKEIEILTEENEDLKQQ 835
Cdd:pfam17380 566 -SRLEAMEREREMMRQIVESEKAR 588
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
3130-3448 |
2.20e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 2.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3130 QKQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAELRSELAQTKLELETTLKAQHKHLKELEAFRLEVKDKTDEVHLLN 3209
Cdd:TIGR02168 667 KTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3210 DTLASEQKKSRELQWALEKEKAKLGHSEERdKEELEDLKFSLESQkqrnlqlnllleqqkqlLDESQQKIESQRMLYDAQ 3289
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEE-LAEAEAEIEELEAQ-----------------IEQLKEELKALREALDEL 808
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3290 LSEEHGRNLELQVLLESEKVRIREMSSTLDRERELHAQLQSNDGTGQSrpslpSEDLLKELQKQLEEKHSRIVELLNEte 3369
Cdd:TIGR02168 809 RAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIES-----LAAEIEELEELIEELESELEALLNE-- 881
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 3370 kykldslqtRQQMEKDRQVHRKTLQTEQEantegqkKMHELQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQ 3448
Cdd:TIGR02168 882 ---------RASLEEALALLRSELEELSE-------ELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1994-2228 |
2.87e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 2.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1994 QQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQE---KNAELMDLRQQNQALEKQLEKMRKF 2070
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQElaaLEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2071 LDEQ--AIDREHERD-----VFQQEIQKLEQQLKVvprFQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQE 2143
Cdd:COG4942 106 LAELlrALYRLGRQPplallLSPEDFLDAVRRLQY---LKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2144 RNEEIEKLEFRVRELEQALlvsadtfqkvedrkqfgaveakpeLSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELEN 2223
Cdd:COG4942 183 LEEERAALEALKAERQKLL------------------------ARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
....*
gi 1622925510 2224 KNEEV 2228
Cdd:COG4942 239 AAERT 243
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
157-440 |
3.38e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.60 E-value: 3.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 157 LEMMESELAGKQHEIEELNRELEEMRVtYGTEGLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQ 236
Cdd:TIGR02168 735 LARLEAEVEQLEERIAQLSKELTELEA-EIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 237 KLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQIsflqekikvyemeqdkkv 316
Cdd:TIGR02168 814 LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL------------------ 875
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 317 eNSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQkerQSSEEIKQ 396
Cdd:TIGR02168 876 -EALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQE---RLSEEYSL 951
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1622925510 397 LMGTVEELQKRNHKDsqfetdivqrmEQETQRKLEQLRAELDEM 440
Cdd:TIGR02168 952 TLEEAEALENKIEDD-----------EEEARRRLKRLENKIKEL 984
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
161-860 |
6.51e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 55.75 E-value: 6.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 161 ESELAGKQHEIEELNRELEEM---RVTYGTEGLQQLQEFEAAIKQRDGIIT---QLTANLQQARREKDETMREFLELTEQ 234
Cdd:pfam02463 327 EKELKKEKEEIEELEKELKELeikREAEEEEEEELEKLQEKLEQLEEELLAkkkLESERLSSAAKLKEEELELKSEEEKE 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 235 SQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDK 314
Cdd:pfam02463 407 AQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL 486
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 315 KVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVV-QKNQEIKNMKLELTNSKQKERQSSEE 393
Cdd:pfam02463 487 ELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVEnYKVAISTAVIVEVSATADEVEERQKL 566
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 394 IKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVqmKQELIRQHVSQMEELKTRHKGEMEN 473
Cdd:pfam02463 567 VRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDD--KRAKVVEGILKDTELTKLKESAKAK 644
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 474 ALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKcaLQRQLEDLFEELSFSREQIQRARQTIAE 553
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEI--LRRQLEIKKKEQREKEELKKLKLEAEEL 722
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 554 QESKLNEAQ-KSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLRTQLLFS 632
Cdd:pfam02463 723 LADRVQEAQdKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEE 802
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 633 HEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNS 712
Cdd:pfam02463 803 LRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQ 882
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 713 KSEEMTLqinELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDE----KKALE 788
Cdd:pfam02463 883 KLKDELE---SKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKeennKEEEE 959
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 789 DMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVN 860
Cdd:pfam02463 960 ERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEFLELFVSINK 1031
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
156-593 |
8.22e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.51 E-value: 8.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 156 HLEMMESELAGKQHEIEELNRELEEMRVTYGT--EGLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREfleLTE 233
Cdd:pfam15921 445 QMERQMAAIQGKNESLEKVSSLTAQLESTKEMlrKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAE---ITK 521
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 234 QSQKLQIQFQQLQasetlrnstHSSTAADLLQ-AKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEME- 311
Cdd:pfam15921 522 LRSRVDLKLQELQ---------HLKNEGDHLRnVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEk 592
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 312 -QDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQS 390
Cdd:pfam15921 593 aQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSL 672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 391 SEEIkqlmgtveELQKRNHKDSQFE----TDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHvsqmeelktr 466
Cdd:pfam15921 673 SEDY--------EVLKRNFRNKSEEmettTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQK---------- 734
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 467 hkgemenalrsypNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQR 546
Cdd:pfam15921 735 -------------QITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERR 801
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1622925510 547 ARQTIAEQESKLNEAQKSLSTVEDLkaeIVSASESRKELELKHEAEV 593
Cdd:pfam15921 802 LKEKVANMEVALDKASLQFAECQDI---IQRQEQESVRLKLQHTLDV 845
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
2134-2448 |
8.37e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.46 E-value: 8.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2134 KEQLQRDIQERNEEIEKLEFRVRELEQALlvsadtfQKVEDRKqfgaveAKPELSLEVQLQAERDAIDRKEKEITNLEEQ 2213
Cdd:TIGR02169 172 KEKALEELEEVEENIERLDLIIDEKRQQL-------ERLRRER------EKAERYQALLKEKREYEGYELLKEKEALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2214 LEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKfaqiIQEKE 2293
Cdd:TIGR02169 239 KEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERS----IAEKE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2294 VEIDQLNEQIMKLQQQlkittdnkvIEEKNELIRDLETQIEclmsDQECVKRNREEEIEQLNEVIEKLQQELANIGQK-- 2371
Cdd:TIGR02169 315 RELEDAEERLAKLEAE---------IDKLLAEIEELEREIE----EERKRRDKLTEEYAELKEELEDLRAELEEVDKEfa 381
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 2372 TLVDAH-SLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQELFSLKRE-RESMEKIQSI 2448
Cdd:TIGR02169 382 ETRDELkDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEiKKQEWKLEQL 460
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
2134-2782 |
9.01e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.51 E-value: 9.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2134 KEQLQRDIQERNEEIEKLEFRVRELEQallvsadtfqkVEDRKQFGAVEAKPELSLEVQ-LQAERDAI----DRKEKEIT 2208
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNE-----------LHEKQKFYLRQSVIDLQTKLQeMQMERDAMadirRRESQSQE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2209 NLEEQLEQFREELEN----KNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGK 2284
Cdd:pfam15921 142 DLRNQLQNTVHELEAakclKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2285 FAQIIQEKEVEIDQLNEQIMKLQQQ---LKITTDNKVieekNELIRDLETQIECLMSDQE----------CVKRNREEEI 2351
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQleaLKSESQNKI----ELLLQQHQDRIEQLISEHEveitgltekaSSARSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2352 EQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKL-ALEQQVETTNEEMTFTKNILKETNFKMNQLTQ 2430
Cdd:pfam15921 298 QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIeELEKQLVLANSELTEARTERDQFSQESGNLDD 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2431 ELFSL-----KRERE-SMEKIQ-----------SIPGKSVNMAIDDMSKDKPELEVVLTedALKS-LENQTYLKSFEENG 2492
Cdd:pfam15921 378 QLQKLladlhKREKElSLEKEQnkrlwdrdtgnSITIDHLRRELDDRNMEVQRLEALLK--AMKSeCQGQMERQMAAIQG 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2493 KG-SIINLETRLLQLEST----------VRAKDLELTQCYKQIKDMQ----------EQGQSEIEVLQKKI-LNLQKILE 2550
Cdd:pfam15921 456 KNeSLEKVSSLTAQLESTkemlrkvveeLTAKKMTLESSERTVSDLTaslqekeraiEATNAEITKLRSRVdLKLQELQH 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2551 EKVAAALVSQIQLEAVQEYAKFCQDNQTIssEPERTNIQNLNQLrEDESGSNISALTLRISELESQLVEMHTSL-----I 2625
Cdd:pfam15921 536 LKNEGDHLRNVQTECEALKLQMAEKDKVI--EILRQQIENMTQL-VGQHGRTAGAMQVEKAQLEKEINDRRLELqefkiL 612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2626 LGKEQVEIAEKNVLEKEKKLLELQKLLEGNEKKQGGKERKRSPQDF--EVLKTTTELFHSNEE-----SGFLNELEALRA 2698
Cdd:pfam15921 613 KDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLlnEVKTSRNELNSLSEDyevlkRNFRNKSEEMET 692
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2699 ESVATKAQLTGYKEKTEKLQGELLIKETN-------MASLQKDLSQVRDHLAEAKEKLSILEKEDKTAvqeNKKACMFKP 2771
Cdd:pfam15921 693 TTNKLKMQLKSAQSELEQTRNTLKSMEGSdghamkvAMGMQKQITAKRGQIDALQSKIQFLEEAMTNA---NKEKHFLKE 769
|
730
....*....|.
gi 1622925510 2772 LPVKLSKSIAS 2782
Cdd:pfam15921 770 EKNKLSQELST 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1585-2275 |
9.69e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 9.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1585 NEEQLEDMRQELVRQyqehqqatellrqahMRQMERQREDQEQ---LQEEIKRLNKQLAqrssidnenlvserervLLEE 1661
Cdd:COG1196 187 NLERLEDILGELERQ---------------LEPLERQAEKAERyreLKEELKELEAELL-----------------LLKL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1662 LEALKQLSLAGREKlccelrnsstqtqngNENQGEAEEQTFKEKELDRKpehvppeiLSNERYALQKANNRLLKILLEVV 1741
Cdd:COG1196 235 RELEAELEELEAEL---------------EELEAELEELEAELAELEAE--------LEELRLELEELELELEEAQAEEY 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1742 KTTAAVEETIGRHVLGILDRSSKSQSSASLIWRSEAEAsvkscvheehtrvtdesipsysgsdmprndinmwskvtEEGT 1821
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRELEERLEELEEELAELE--------------------------------------EELE 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1822 ELSQRLVRSGFAGTEIDPENEELVLNIsSRLQAAVEKLLEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDL 1901
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAEL-AEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1902 RERLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQ 1981
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1982 KEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALE 2061
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAG 572
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2062 K----QLEKMRK-FLDEQAIDREHERDVFQQEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTdKCSELLLSKEQ 2136
Cdd:COG1196 573 RatflPLDKIRArAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAV-TLAGRLREVTL 651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2137 LQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAKPELSLEVQLQAERDAIDRKEK-EITNLEEQLE 2215
Cdd:COG1196 652 EGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEElEEEALEEQLE 731
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 2216 QFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLG----LAIKESDAVST 2275
Cdd:COG1196 732 AEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGpvnlLAIEEYEELEE 795
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1842-2331 |
1.01e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.12 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1842 EELVLNISSRLQAAVEKLLEAISETSSQLEHAKVTQTELMREsfrQKQEATESLKCQEDLRERLHEESRAREQLAVELSK 1921
Cdd:pfam15921 323 ESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTE---RDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQ 399
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1922 AEGVID---GYADEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQ 1998
Cdd:pfam15921 400 NKRLWDrdtGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRK 479
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1999 ETEKLMKEKLEVQCQAEKVRD---DLQKQVKALEidveeqvsrfieleqEKNAELMDLRQQnqaLEKQLEKMRKFLDEQa 2075
Cdd:pfam15921 480 VVEELTAKKMTLESSERTVSDltaSLQEKERAIE---------------ATNAEITKLRSR---VDLKLQELQHLKNEG- 540
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2076 idrEHERDVfQQEIQKLEQQLKVVPRFQPISEHQtreVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEF-- 2153
Cdd:pfam15921 541 ---DHLRNV-QTECEALKLQMAEKDKVIEILRQQ---IENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKIlk 613
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2154 -----RVRELEQAllVSADTFQKVEdrkqfgAVEAKPELSLEVQ-LQAERDAIDRKEK----EITNLEEQLEQFREELEN 2223
Cdd:pfam15921 614 dkkdaKIRELEAR--VSDLELEKVK------LVNAGSERLRAVKdIKQERDQLLNEVKtsrnELNSLSEDYEVLKRNFRN 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2224 KNEEVQQLHMQLEIQKKESTTrlqELEQENKLFKDDMEKLGLAIKEsdAVSTQDQhvlfgkfaqiIQEKEVEIDQLNEQI 2303
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQS---ELEQTRNTLKSMEGSDGHAMKV--AMGMQKQ----------ITAKRGQIDALQSKI 750
|
490 500 510
....*....|....*....|....*....|
gi 1622925510 2304 MKLQQQLKITTDNK--VIEEKNELIRDLET 2331
Cdd:pfam15921 751 QFLEEAMTNANKEKhfLKEEKNKLSQELST 780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
216-797 |
1.06e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 216 QARREKDETMREFLELTEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLE---EQDHLLEDYQKKKE 292
Cdd:PTZ00121 1388 EEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKkkaEEAKKAEEAKKKAE 1467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 293 dftmqisflqEKIKVYEMEqdKKVENSNKEEIQEKETiieELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQE 372
Cdd:PTZ00121 1468 ----------EAKKADEAK--KKAEEAKKADEAKKKA---EEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEE 1532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 373 IKNMKlelTNSKQKERQSSEEIKQL--MGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQ 450
Cdd:PTZ00121 1533 AKKAD---EAKKAEEKKKADELKKAeeLKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 451 ELIRQHVSQMEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQdtnSQKEKLKEElgvilEEKcalqRQL 530
Cdd:PTZ00121 1610 EEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK---AAEEAKKAE-----EDK----KKA 1677
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 531 EDLFEELSFSREQIQRARQTiaEQESKLNEAQKSLSTVEDLKAEIVSASESRKEL---ELKHEAEVTNYKIKLEMLEKEK 607
Cdd:PTZ00121 1678 EEAKKAEEDEKKAAEALKKE--AEEAKKAEELKKKEAEEKKKAEELKKAEEENKIkaeEAKKEAEEDKKKAEEAKKDEEE 1755
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 608 NAVLDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDN 687
Cdd:PTZ00121 1756 KKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEV 1835
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 688 LITKQNQliLEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILR--QEEKEKGTLEQEVQELQLKIELLEKQMKEKEND 765
Cdd:PTZ00121 1836 ADSKNMQ--LEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEddEEEIEEADEIEKIDKDDIEREIPNNNMAGKNND 1913
|
570 580 590
....*....|....*....|....*....|..
gi 1622925510 766 LqeKFTQLEAENSILKDEKKALEDMLKIHTPD 797
Cdd:PTZ00121 1914 I--IDDKLDKDEYIKRDAEETREEIIKISKKD 1943
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
92-1174 |
1.28e-06 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.06 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 92 ITSHEQVFSVeLESEISTT-ADDYSSEVNGCSFVMKTGKPTNLlrEEEFGVDDSYSEQGAQYSLTH---LEMMESELAGK 167
Cdd:TIGR01612 651 LKNKDKIYST-IKSELSKIyEDDIDALYNELSSIVKENAIDNT--EDKAKLDDLKSKIDKEYDKIQnmeTATVELHLSNI 727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 168 QHEIEELNRELEEMRVTYGTEGLQQLQEFEAAIKQRDgiiTQLTANLQQARREKDEtmrefleLTEQSQKLQIQFQQLQA 247
Cdd:TIGR01612 728 ENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKE---KELSNKINDYAKEKDE-------LNKYKSKISEIKNHYND 797
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 248 SETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTmqisflqEKIKVYemeqdKKVENSNKEEIQEK 327
Cdd:TIGR01612 798 QINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFL-------NKVDKF-----INFENNCKEKIDSE 865
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 328 ETIIEELNTKIIEE--EKKTLELKDKLTAADKLLGELQEQVVQKNQEI-------------KNMKLELTNSKQKERQSSE 392
Cdd:TIGR01612 866 HEQFAELTNKIKAEisDDKLNDYEKKFNDSKSLINEINKSIEEEYQNIntlkkvdeyikicENTKESIEKFHNKQNILKE 945
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 393 EIKQLMGTVEE--LQKRNHKDsQFETDIVQRMeQETQRKLEQLRAELDEMYGQQIVQM-----------KQELIRQHVSQ 459
Cdd:TIGR01612 946 ILNKNIDTIKEsnLIEKSYKD-KFDNTLIDKI-NELDKAFKDASLNDYEAKNNELIKYfndlkanlgknKENMLYHQFDE 1023
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 460 MEELKTRHKGEMENALRSYPNITV--------------NE--DQIKLMNVAI-NELNIKLQDTNSQKEKLKEE--LGVIL 520
Cdd:TIGR01612 1024 KEKATNDIEQKIEDANKNIPNIEIaihtsiyniideieKEigKNIELLNKEIlEEAEINITNFNEIKEKLKHYnfDDFGK 1103
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 521 EEKCALQRQLEDLFEELSFSREQIQRARQTIAE----QESKLNEAQKSLSTVEDLKAEIVSaSESRKELELKHEAEVTNY 596
Cdd:TIGR01612 1104 EENIKYADEINKIKDDIKNLDQKIDHHIKALEEikkkSENYIDEIKAQINDLEDVADKAIS-NDDPEEIEKKIENIVTKI 1182
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 597 KIKLEMLEkEKNAVLDRMA--ESQEAELERLRTqLLFSHEEELSKL------KEDLEIEHQIN-IEKLKDNLGiHYKQQI 667
Cdd:TIGR01612 1183 DKKKNIYD-EIKKLLNEIAeiEKDKTSLEEVKG-INLSYGKNLGKLflekidEEKKKSEHMIKaMEAYIEDLD-EIKEKS 1259
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 668 DGLQNEM------SQKIETMQF----EKDNLITKQNQlILEISKLKDLQQSLVNSKSEEMtlQINELQKEIEI-LRQEEK 736
Cdd:TIGR01612 1260 PEIENEMgiemdiKAEMETFNIshddDKDHHIISKKH-DENISDIREKSLKIIEDFSEES--DINDIKKELQKnLLDAQK 1336
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 737 EKGTLEQEVQELQLKIELLE-KQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIHTPDnqeerlIFIDSIKSKSKD 815
Cdd:TIGR01612 1337 HNSDINLYLNEIANIYNILKlNKIKKIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDD------INLEECKSKIES 1410
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 816 SVWEKEIEilteenedlkqQCIQlneEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDDLEDSKNKQE--LEYKSKL 893
Cdd:TIGR01612 1411 TLDDKDID-----------ECIK---KIKELKNHILSEESNIDTYFKNADENNENVLLLFKNIEMADNKSQhiLKIKKDN 1476
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 894 KALNEELHLQRINPTTVKTK--SSVFDEDKTFVAETLEMGEVVEKDTTELMEKLEvtkreKLELSQRLADLSEQLKQKHG 971
Cdd:TIGR01612 1477 ATNDHDFNINELKEHIDKSKgcKDEADKNAKAIEKNKELFEQYKKDVTELLNKYS-----ALAIKNKFAKTKKDSEIIIK 1551
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 972 EISFLNEEVKSLKQEKEQVLLRCRELEIIINHNRAGNVQSCDTQVsslsdgvvtmtsrDAEGSVSKVNKSFGEESKImve 1051
Cdd:TIGR01612 1552 EIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAI-------------DIQLSLENFENKFLKISDI--- 1615
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1052 dKVSFENMTTGKESKQEQLilDHLPSVTKESSLRAAQPSENdKLQKELNVLKSEQNDLrlqmEAQRICLSlvystHVDQV 1131
Cdd:TIGR01612 1616 -KKKINDCLKETESIEKKI--SSFSIDSQDTELKENGDNLN-SLQEFLESLKDQKKNI----EDKKKELD-----ELDSE 1682
|
1130 1140 1150 1160
....*....|....*....|....*....|....*....|...
gi 1622925510 1132 REYMENEKDKALCSLKEELIsaqeEKIKELQKIHQLELQNTKT 1174
Cdd:TIGR01612 1683 IEKIEIDVDQHKKNYEIGII----EKIKEIAIANKEEIESIKE 1721
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
512-831 |
1.47e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 54.55 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 512 LKEELGVILEekcALQR----QLEDLFEELSfsREQIQRARqtiaeqeSKLNEAQKSLSTVEDLKAEIVSASESRKELEL 587
Cdd:PRK05771 14 LKSYKDEVLE---ALHElgvvHIEDLKEELS--NERLRKLR-------SLLTKLSEALDKLRSYLPKLNPLREEKKKVSV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 588 KHEAEVtnykikLEMLEKEKNAVLDRMaESQEAELERLRTQLlfsheEELSKLKEDLEIEHQINIEkLKDNLGIHYKQQI 667
Cdd:PRK05771 82 KSLEEL------IKDVEEELEKIEKEI-KELEEEISELENEI-----KELEQEIERLEPWGNFDLD-LSLLLGFKYVSVF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 668 DGlqnemsqKIETMQFEKDNLITKQNQLIlEISKLKDLQQSLVNSKSEEMTLQINELqKEIEILRQEEKEKGTLEQEVQE 747
Cdd:PRK05771 149 VG-------TVPEDKLEELKLESDVENVE-YISTDKGYVYVVVVVLKELSDEVEEEL-KKLGFERLELEEEGTPSELIRE 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 748 LQLKIELLEKQMKEKENDLQEK-------FTQLEAENSILKDEKKALEDMLK------IH--TPDNQEERLifIDSIKSK 812
Cdd:PRK05771 220 IKEELEEIEKERESLLEELKELakkyleeLLALYEYLEIELERAEALSKFLKtdktfaIEgwVPEDRVKKL--KELIDKA 297
|
330
....*....|....*....
gi 1622925510 813 SKDSVWEKEIEIlTEENED 831
Cdd:PRK05771 298 TGGSAYVEFVEP-DEEEEE 315
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1978-2310 |
1.89e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.30 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1978 LSRQKeAMKAEAGPVEQQLlqetekLMKEKLEVQCQAEKVRDDLQkqvkaleiDVEEQVSRFIELEQEKNAELMDLRQQN 2057
Cdd:TIGR02169 210 AERYQ-ALLKEKREYEGYE------LLKEKEALERQKEAIERQLA--------SLEEELEKLTEEISELEKRLEEIEQLL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2058 QALEKQLEKMrkfldeqaidREHERDVFQQEIQKLEQQLKVVPRFQPISEhqtREVEQLTNHLKEKTDKCSELLLSKEQL 2137
Cdd:TIGR02169 275 EELNKKIKDL----------GEEEQLRVKEKIGELEAEIASLERSIAEKE---RELEDAEERLAKLEAEIDKLLAEIEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2138 QRDIQERNEEIEKLEFRVRELEQALlvsADTFQKVEDrkqfgaveakpelsLEVQLQAERDAIDRKEKEITNLEEQLEQF 2217
Cdd:TIGR02169 342 EREIEEERKRRDKLTEEYAELKEEL---EDLRAELEE--------------VDKEFAETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2218 REELENKNEEVQQLHMQLEIQKKEsttrLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLfGKFAQIIQEKEVEID 2297
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELADLNAA----IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADL-SKYEQELYDLKEEYD 479
|
330
....*....|...
gi 1622925510 2298 QLNEQIMKLQQQL 2310
Cdd:TIGR02169 480 RVEKELSKLQREL 492
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1587-2231 |
1.96e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 1.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1587 EQLEDMRQELVRQYQEHQQatellrqahmrQMERQREDQEQLQEEIKRLNKQLaQRSSIDNENLVSERERVLLEELEALK 1666
Cdd:TIGR02168 361 EELEAELEELESRLEELEE-----------QLETLRSKVAQLELQIASLNNEI-ERLEARLERLEDRRERLQQEIEELLK 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1667 QLSLAGREklccELRNSSTQTQNGNENQGEAEEQTFKEKELDRKPEHVPPEILSNERYALQKANNRllkilLEVVKTTAA 1746
Cdd:TIGR02168 429 KLEEAELK----ELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR-----LDSLERLQE 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1747 VEETIGRHVLGILDRSSKSQSSASLIW-----RSEAEASVKSCVHEEHTRVTDESIPSYSG--SDMPRNDI--------N 1811
Cdd:TIGR02168 500 NLEGFSEGVKALLKNQSGLSGILGVLSelisvDEGYEAAIEAALGGRLQAVVVENLNAAKKaiAFLKQNELgrvtflplD 579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1812 MWSKVTEEGTELSQRLVRSGFAGTEIDPE--NEELVLNISSRLQ--AAVEKLLEAISETSSQLEHAK-VTQT-ELMRESF 1885
Cdd:TIGR02168 580 SIKGTEIQGNDREILKNIEGFLGVAKDLVkfDPKLRKALSYLLGgvLVVDDLDNALELAKKLRPGYRiVTLDgDLVRPGG 659
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1886 R--------------QKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLE 1951
Cdd:TIGR02168 660 VitggsaktnssileRRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLE 739
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1952 QELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQcQAEKVRDDLQKQVKALEID 2031
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK-ALREALDELRAELTLLNEE 818
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2032 VEEQVSRFIELEQEKNaelmDLRQQNQALEKQLEKMRkfldEQAIDREHERDVFQQEIQKLEQQLKVVprfQPISEHQTR 2111
Cdd:TIGR02168 819 AANLRERLESLERRIA----ATERRLEDLEEQIEELS----EDIESLAAEIEELEELIEELESELEAL---LNERASLEE 887
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2112 EVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFqKVEDRKQFGAVEAKPELSLEV 2191
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL-SEEYSLTLEEAEALENKIEDD 966
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1622925510 2192 QLQAERDaIDRKEKEITNL-------EEQLEQFREELENKNEEVQQL 2231
Cdd:TIGR02168 967 EEEARRR-LKRLENKIKELgpvnlaaIEEYEELKERYDFLTAQKEDL 1012
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
2019-2222 |
2.51e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2019 DDLQKQVKALEiDVEEQVSRFIELEQEKnAELMDLRQQNQALEKQLEkmRKFLDEQAIDREHERDVFQQEIQKLEQQLkv 2098
Cdd:COG4913 245 EDAREQIELLE-PIRELAERYAAARERL-AELEYLRAALRLWFAQRR--LELLEAELEELRAELARLEAELERLEARL-- 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2099 vprfqpisEHQTREVEQLTNHLKE-KTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQ 2177
Cdd:COG4913 319 --------DALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAA 390
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 2178 fGAVEAKPELS---------LEVQLQAERDAIDRKEKEITNLE-------EQLEQFREELE 2222
Cdd:COG4913 391 -ALLEALEEELealeealaeAEAALRDLRRELRELEAEIASLErrksnipARLLALRDALA 450
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
489-1198 |
2.63e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 53.82 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 489 KLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELsfsreqIQRARQTIAEQESKLNEAQKSLSTV 568
Cdd:pfam02463 218 KLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEK------LAQVLKENKEEEKEKKLQEEELKLL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 569 EDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEH 648
Cdd:pfam02463 292 AKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQL 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 649 QINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILeisKLKDLQQSLVNSKSEEMTLQINELQKEI 728
Cdd:pfam02463 372 EEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDL---LKEEKKEELEILEEEEESIELKQGKLTE 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 729 EILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLIFIDS 808
Cdd:pfam02463 449 EKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 809 IKSKSKDSVWEKE----IEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKVKDDLEDSKNK 884
Cdd:pfam02463 529 GRLGDLGVAVENYkvaiSTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 885 QELEYK-------SKLKALNEELHLQRINPTTVKTKSSVFDEDKTFVAETLEMGEV---VEKDTTELMEKLEVTKREKLE 954
Cdd:pfam02463 609 DKATLEadeddkrAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVkasLSELTKELLEIQELQEKAESE 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 955 LsQRLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIIINHNRAGNVQ--------------SCDTQVSSLS 1020
Cdd:pfam02463 689 L-AKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQkideeeeeeeksrlKKEEKEEEKS 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1021 DGVVTMTSRDAEGSVSKVNKSFGEESKIMVEDKVSFENMttgKESKQEQLILDHLPSVTKESSLRAAQPSENDKLQKELN 1100
Cdd:pfam02463 768 ELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRAL---EEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKE 844
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1101 VLKSEQNDLRLQMEAQRICLSLVYSTHVDQVREYMENEKDKALCSLKEELISA--QEEKIKELQKIHQLELQNTKTQETG 1178
Cdd:pfam02463 845 EQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEekKELEEESQKLNLLEEKENEIEERIK 924
|
730 740
....*....|....*....|
gi 1622925510 1179 DEGKPLHLLIGKLRKAVSEE 1198
Cdd:pfam02463 925 EEAEILLKYEEEPEELLLEE 944
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
2015-2551 |
2.72e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 2.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2015 EKVRDDLQKQVKALEiDVEEQVSRFIELEQEKNAELMDLRQQNQAlEKQLEKMRKFLDEQAIDREHERDVFQQEIQKLEQ 2094
Cdd:PRK03918 144 DESREKVVRQILGLD-DYENAYKNLGEVIKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELRE 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2095 QLKVVprfqpisEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEqallvsadtfQKVED 2174
Cdd:PRK03918 222 ELEKL-------EKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELE----------EKVKE 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2175 RKQFGAvEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFRE---ELENKNEEVQqlhmQLEIQKKESTTRLQELEQ 2251
Cdd:PRK03918 285 LKELKE-KAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEErikELEEKEERLE----ELKKKLKELEKRLEELEE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2252 ENKLFKDDMEKLGlaikESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQqlKITTDNKVIEEKNELIRDLET 2331
Cdd:PRK03918 360 RHELYEEAKAKKE----ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITA--RIGELKKEIKELKKAIEELKK 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2332 qieclmSDQECVKRNREEEIEQLNEVIEKLQQELANIgQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQvETTNEEM 2411
Cdd:PRK03918 434 ------AKGKCPVCGRELTEEHRKELLEEYTAELKRI-EKELKEIEEKERKLRKELRELEKVLKKESELIKL-KELAEQL 505
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2412 TFTKNILKETNF-KMNQLTQELFSLKRERESMEKIQSIPGKSVNmAIDDMSKDKPELEVVL--TEDALKSLENQtylksF 2488
Cdd:PRK03918 506 KELEEKLKKYNLeELEKKAEEYEKLKEKLIKLKGEIKSLKKELE-KLEELKKKLAELEKKLdeLEEELAELLKE-----L 579
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622925510 2489 EENGKGSIINLETRLLQLESTVRaKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEE 2551
Cdd:PRK03918 580 EELGFESVEELEERLKELEPFYN-EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKR 641
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
267-847 |
2.73e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 53.75 E-value: 2.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 267 KQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTL 346
Cdd:PRK01156 189 EEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSME 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 347 ELKD-KLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKrnhKDSQFETDIVQRMEQe 425
Cdd:PRK01156 269 LEKNnYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIK---KLSVLQKDYNDYIKK- 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 426 tQRKLEQLRAELDEMYGQQI-VQMKQELIRQHVSQMEELKTRHKGEMENALRSYPNITVNEDQIklmNVAINELNIKLQD 504
Cdd:PRK01156 345 -KSRYDDLNNQILELEGYEMdYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAI---KKELNEINVKLQD 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 505 TNSQKEKLKEELGVILEEKCALQRQLEDLFEE-------LSFSREQIQRARQTIAEQESKLNEAQKSLST-VEDLKAEIV 576
Cdd:PRK01156 421 ISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgTTLGEEKSNHIINHYNEKKSRLEEKIREIEIeVKDIDEKIV 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 577 SASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELErlrtqllfsHEEELSKLKE-DLEIEHQINIEKL 655
Cdd:PRK01156 501 DLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELKDKHDK---------YEEIKNRYKSlKLEDLDSKRTSWL 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 656 KDNLGIhykQQIDgLQNEMSQKIETMQFEKDnLITKQNQLILEISKLKDLQQSlvnskseemtlQINELQKEIEILRQEE 735
Cdd:PRK01156 572 NALAVI---SLID-IETNRSRSNEIKKQLND-LESRLQEIEIGFPDDKSYIDK-----------SIREIENEANNLNNKY 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 736 KEKGTLEQEVQELQLKIELLEKQ---MKEKENDLQEKFTQLEAENSILKDEKKALEDmlkihtpdnqeerlifidsikSK 812
Cdd:PRK01156 636 NEIQENKILIEKLRGKIDNYKKQiaeIDSIIPDLKEITSRINDIEDNLKKSRKALDD---------------------AK 694
|
570 580 590
....*....|....*....|....*....|....*
gi 1622925510 813 SKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQR 847
Cdd:PRK01156 695 ANRARLESTIEILRTRINELSDRINDINETLESMK 729
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
2135-2359 |
4.19e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 52.94 E-value: 4.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2135 EQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDrkqfgaveakpELSLevqLQAERDAIDRKEKEITNLEEQL 2214
Cdd:COG2433 409 TEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLER-----------ELSE---ARSEERREIRKDREISRLDREI 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2215 EQFREELENKNEEVQQLHMQLEIQKkesttRLQELEQENKLF---------KDDMEKL--GLAIKESDAVSTQDQHVLFG 2283
Cdd:COG2433 475 ERLERELEEERERIEELKRKLERLK-----ELWKLEHSGELVpvkvvekftKEAIRRLeeEYGLKEGDVVYLRDASGAGR 549
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2284 KFAQIIQEKEVEIDQLNEQI-MKLQQQLK------ITTDNKVIEEKNEL----IRDLETQIECLMSDQEcvKRNREEEIE 2352
Cdd:COG2433 550 STAELLAEAGPRAVIVPGELsEAADEVLFeegipvLPAEDVTIQEVDDLavvdEEELEAAIEDWEERAE--ERRREKKAE 627
|
....*..
gi 1622925510 2353 QLNEVIE 2359
Cdd:COG2433 628 MLERLIS 634
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
309-999 |
4.42e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 4.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 309 EMEQDKKVENSNKEEIQEKETIIEE---LNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKnmKLELTNSKQ 385
Cdd:PTZ00121 1078 DFDFDAKEDNRADEATEEAFGKAEEakkTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEAR--KAEDAKRVE 1155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 386 KERQSSEEIKQLMGTVEELQKRNHKDSQFETdiVQRMEQ----ETQRKLEQLRAELDEMYGQQIVQMKQELIRQHVSQME 461
Cdd:PTZ00121 1156 IARKAEDARKAEEARKAEDAKKAEAARKAEE--VRKAEElrkaEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAE 1233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 462 ELKTRhkgemENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQ-RQLEDL--FEELS 538
Cdd:PTZ00121 1234 EAKKD-----AEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEaKKAEEKkkADEAK 1308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 539 FSREQIQRARQT--IAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKH-EAEVTNYKIKLEMLEKEKNAVLDRMA 615
Cdd:PTZ00121 1309 KKAEEAKKADEAkkKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAaEEKAEAAEKKKEEAKKKADAAKKKAE 1388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 616 ESQEAELERLRTQLLFSHEEELSKLKEDLEI--EHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQfEKDNLITKQN 693
Cdd:PTZ00121 1389 EKKKADEAKKKAEEDKKKADELKKAAAAKKKadEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK-KAEEAKKKAE 1467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 694 qlilEISKLKDLQQSLVNS-KSEEMTLQINELQKEIEILRQEEKEKGTLEqevqelqlkiELLEKQMKEKENDLQEKFTQ 772
Cdd:PTZ00121 1468 ----EAKKADEAKKKAEEAkKADEAKKKAEEAKKKADEAKKAAEAKKKAD----------EAKKAEEAKKADEAKKAEEA 1533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 773 LEAENSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSF 852
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 853 AEKNFEVNYQELQEEYacllKVKDDLEDSKNKQElEYKSKLKALNEELHLQRINPTTVKTKSsvfDEDKTfVAETLEMGE 932
Cdd:PTZ00121 1614 KAEEAKIKAEELKKAE----EEKKKVEQLKKKEA-EEKKKAEELKKAEEENKIKAAEEAKKA---EEDKK-KAEEAKKAE 1684
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 933 VVEKDTTELMEKLEVTKREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEI 999
Cdd:PTZ00121 1685 EDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKK 1751
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
161-365 |
4.68e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 161 ESELAGKQHEIEELNRELEEMRVTYgTEGLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQI 240
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEE-KALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 241 QFQQlQASETLRNSTHSS-----TAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDKK 315
Cdd:COG4942 105 ELAE-LLRALYRLGRQPPlalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAEL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 316 VENSNK--EEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQ 365
Cdd:COG4942 184 EEERAAleALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1884-2159 |
5.09e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.82 E-value: 5.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1884 SFRQKQEATESLKcQEDLRERLHEESRA---REQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQEllcasNR 1960
Cdd:pfam17380 285 SERQQQEKFEKME-QERLRQEKEEKAREverRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQE-----ER 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1961 LQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKL----------EVQCQAEKVRDDL----QKQVK 2026
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKIleeerqrkiqQQKVEMEQIRAEQeearQREVR 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2027 ALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHERDVFQQEIQK-----LEQQLKVVPR 2101
Cdd:pfam17380 439 RLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEErkqamIEEERKRKLL 518
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622925510 2102 FQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELE 2159
Cdd:pfam17380 519 EKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMERERE 576
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3076-3448 |
5.78e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 5.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3076 EYQAAMEYLQKADRRSLLSEIQALHAQMNGRKITLKREQENEKSSQELLEYNIQQKQSQMLEMQVElssMKDRATELQEQ 3155
Cdd:PTZ00121 1376 AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAE---EAKKADEAKKK 1452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3156 lSSEKMVVAELRSELAQTKLELETTLKAQH-KHLKELEAFRLEVKDKTDEVHllndTLASEQKKSRELQWALEKEKAKLG 3234
Cdd:PTZ00121 1453 -AEEAKKAEEAKKKAEEAKKADEAKKKAEEaKKADEAKKKAEEAKKKADEAK----KAAEAKKKADEAKKAEEAKKADEA 1527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3235 HSEErDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQLSEEhgrnlelqvLLESEKVRIREM 3314
Cdd:PTZ00121 1528 KKAE-EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEE---------AKKAEEARIEEV 1597
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3315 SSTLDRERELHAQL-----QSNDGTGQSRPSLPSEDLLKELQKQLEEKHSRIVELLNETEKYKLDSLQTRQQMEKDRQVH 3389
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEakkaeEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKA 1677
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 3390 RKTLQTEQEAN--TEGQKKMHELQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQ 3448
Cdd:PTZ00121 1678 EEAKKAEEDEKkaAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKE 1738
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
2135-2310 |
6.30e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.61 E-value: 6.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2135 EQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAkpELSlevQLQAERDAIDRKEKEITNLEEQL 2214
Cdd:COG4913 620 AELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAER--EIA---ELEAELERLDASSDDLAALEEQL 694
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2215 EQFREELENKNEEVQQLhmQLEIQKKEST-TRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKE 2293
Cdd:COG4913 695 EELEAELEELEEELDEL--KGEIGRLEKElEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLE 772
|
170
....*....|....*..
gi 1622925510 2294 VEIDQLNEQIMKLQQQL 2310
Cdd:COG4913 773 ERIDALRARLNRAEEEL 789
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
352-586 |
8.17e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 8.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 352 LTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRnhkdsqfetdivqrmEQETQRKLE 431
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARR---------------IRALEQELA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 432 QLRAELDEMyGQQIVQMKQELIRQHvsqmEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEK 511
Cdd:COG4942 80 ALEAELAEL-EKEIAELRAELEAQK----EELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 512 LKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLstvEDLKAEIVSASESRKELE 586
Cdd:COG4942 155 LRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKEL---AELAAELAELQQEAEELE 226
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
272-776 |
8.24e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.96 E-value: 8.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 272 THQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQdkkvensnkEEIQEKETIIEELNTKIIEEEKKTLELKDK 351
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR---------EELETLEAEIEDLRETIAETEREREELAEE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 352 LTAADKLLGEL-----------------QEQVVQKNQEIKNMKLELTNSKQKERQS----SEEIKQLMGTVEELQKRNHK 410
Cdd:PRK02224 281 VRDLRERLEELeeerddllaeaglddadAEAVEARREELEDRDEELRDRLEECRVAaqahNEEAESLREDADDLEERAEE 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 411 --------DSQFETDIVQRMEQETQrkLEQLRAELDEM---YGQQIVQMK--QELIRQHVSQMEELKTRHKgEMENALRS 477
Cdd:PRK02224 361 lreeaaelESELEEAREAVEDRREE--IEELEEEIEELrerFGDAPVDLGnaEDFLEELREERDELREREA-ELEATLRT 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 478 YPNiTVNEDQIKL---------MNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQR---QLEDLFE---ELSFSRE 542
Cdd:PRK02224 438 ARE-RVEEAEALLeagkcpecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEErleRAEDLVEaedRIERLEE 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 543 QIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMaesqeAEL 622
Cdd:PRK02224 517 RREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI-----ESL 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 623 ERLRTQL--LFSHEEELSKLKEDLEIEHQINIEKlKDNLGiHYKQQIDGLQNEMSQ-KIETMQFEKDNLITKQNQlilei 699
Cdd:PRK02224 592 ERIRTLLaaIADAEDEIERLREKREALAELNDER-RERLA-EKRERKRELEAEFDEaRIEEAREDKERAEEYLEQ----- 664
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 700 sklkdlqqslVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKEnDLQEKFTQLEAE 776
Cdd:PRK02224 665 ----------VEEKLDELREERDDLQAEIGAVENELEELEELRERREALENRVEALEALYDEAE-ELESMYGDLRAE 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
191-407 |
8.68e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 8.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 191 QQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQI 270
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 271 RTHQQQLEEQdhlLEDYQKKKEDFTMQISFLQEKIK--VYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLEL 348
Cdd:COG4942 100 EAQKEELAEL---LRALYRLGRQPPLALLLSPEDFLdaVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 349 KDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKR 407
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
2065-2263 |
8.69e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.92 E-value: 8.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2065 EKMRKFLDEQAIDreherdvfqQEIQKLEQQLKVVPRfqpisehqtrEVEQLTNHLKEKTDKCSELLLSKEQLQRDIQER 2144
Cdd:COG1579 4 EDLRALLDLQELD---------SELDRLEHRLKELPA----------ELAELEDELAALEARLEAAKTELEDLEKEIKRL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2145 NEEIEKLEFRVRELEQALlvsadtfQKVEDRKQFGAveakpelsLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENK 2224
Cdd:COG1579 65 ELEIEEVEARIKKYEEQL-------GNVRNNKEYEA--------LQKEIESLKRRISDLEDEILELMERIEELEEELAEL 129
|
170 180 190
....*....|....*....|....*....|....*....
gi 1622925510 2225 NEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKL 2263
Cdd:COG1579 130 EAELAELEAELEEKKAELDEELAELEAELEELEAEREEL 168
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
157-563 |
1.07e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.69 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 157 LEMMESELAGKQHEIEELNRELEEMrvtygtEGLQQLQEFEAAIKQRDGIITQLTANLQQARREkdetMREFLELTEQSQ 236
Cdd:COG4717 97 LEELEEELEELEAELEELREELEKL------EKLLQLLPLYQELEALEAELAELPERLEELEER----LEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 237 KLQIQFQQLQAS-ETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQdkk 315
Cdd:COG4717 167 ELEAELAELQEElEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE--- 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 316 vENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIK 395
Cdd:COG4717 244 -RLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELE 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 396 QLMG--------TVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELIR--QHVSQMEELKT 465
Cdd:COG4717 323 ELLAalglppdlSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAalEQAEEYQELKE 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 466 RHKgEMENALRSYPNitvnEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEElsfsrEQIQ 545
Cdd:COG4717 403 ELE-ELEEQLEELLG----ELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED-----GELA 472
|
410
....*....|....*...
gi 1622925510 546 RARQTIAEQESKLNEAQK 563
Cdd:COG4717 473 ELLQELEELKAELRELAE 490
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1843-2411 |
1.10e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.84 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1843 ELVL---NISSRLQAAVEkLLEAISETSSQLEHAK--VTQTELMRESFRQKQEATESLKCQEDLRERLHeesRAREQLAV 1917
Cdd:COG4913 215 EYMLeepDTFEAADALVE-HFDDLERAHEALEDAReqIELLEPIRELAERYAAARERLAELEYLRAALR---LWFAQRRL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1918 ELSKAEgvIDGYADEKTLFERQIQEKTDIIDRLEQELlcasnrlQELEaeqqqiqeerellsrqkEAMKAEAGPVEQQLL 1997
Cdd:COG4913 291 ELLEAE--LEELRAELARLEAELERLEARLDALREEL-------DELE-----------------AQIRGNGGDRLEQLE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1998 QETEKLMKEKLEVqcqaEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKmrkfLDEQAID 2077
Cdd:COG4913 345 REIERLERELEER----ERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAE----AEAALRD 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2078 REHERDVFQQEIQKLEQQLKVVPRFQpiseHQTRevEQLTNHLKEKTDKC---SELLlskeqlqrDIQERNEE----IEK 2150
Cdd:COG4913 417 LRRELRELEAEIASLERRKSNIPARL----LALR--DALAEALGLDEAELpfvGELI--------EVRPEEERwrgaIER 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2151 LefrVRELEQALLVSADTFQK----VEDRKQFGAV---EAKPELSLEVQLQAERDAIDRK----EKEITN-LEEQLEQFR 2218
Cdd:COG4913 483 V---LGGFALTLLVPPEHYAAalrwVNRLHLRGRLvyeRVRTGLPDPERPRLDPDSLAGKldfkPHPFRAwLEAELGRRF 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2219 --------EELEN------------KNEEVQQLHMQLEIQKK-----ESTTRLQELEQENKLFKDDMEKLGLAIKESDAV 2273
Cdd:COG4913 560 dyvcvdspEELRRhpraitragqvkGNGTRHEKDDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAE 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2274 --STQDQHVLFGKFAQiIQEKEVEIDQLNEQIMKLQQQL-KITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNR--- 2347
Cdd:COG4913 640 ldALQERREALQRLAE-YSWDEIDVASAEREIAELEAELeRLDASSDDLAALEEQLEELEAELEELEEELDELKGEIgrl 718
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 2348 EEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEM 2411
Cdd:COG4913 719 EKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARL 782
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1857-2637 |
1.14e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.90 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1857 EKLLEAISETSSQLEHakvtQTELMRESFRQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADEKTLF 1936
Cdd:pfam02463 173 EALKKLIEETENLAEL----IIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1937 ERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELlsrQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEK 2016
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELK---LLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2017 VRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHERDVFQQEIQKLEQQL 2096
Cdd:pfam02463 326 AEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2097 KVvprfQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRK 2176
Cdd:pfam02463 406 EA----QLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2177 QfgavEAKPELSLEVQLQAERDAIDRKEkeitnleeqleqfrEELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLF 2256
Cdd:pfam02463 482 L----QEQLELLLSRQKLEERSQKESKA--------------RSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKV 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2257 KDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKI-TTDNKVIEEKNELIRDLETQIEC 2335
Cdd:pfam02463 544 AISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIdPILNLAQLDKATLEADEDDKRAK 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2336 LMSDQE-CVKRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFT 2414
Cdd:pfam02463 624 VVEGILkDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKK 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2415 KNILKETNFKMNQLTQELFSLKRERESMEKIQSIPgKSVNMAIDDMSKDKPELEVVLTEDALKSLENQTYLKSFEENGKG 2494
Cdd:pfam02463 704 KEQREKEELKKLKLEAEELLADRVQEAQDKINEEL-KLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREK 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2495 SIINLETRllQLESTVRAKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEEKVAAALVSQIQLEAVQEYAKFCQ 2574
Cdd:pfam02463 783 TEKLKVEE--EKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLE 860
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622925510 2575 DNQTISSEPERTNIQNLNQLREDESGSNISALTLRISELESQLVEMHTSLILGKEQVEIAEKN 2637
Cdd:pfam02463 861 EEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERI 923
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1578-2097 |
1.29e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1578 ASRQLMLNEEQLEDMRQELVRQYQEHQQATELLRQAHMR--QMERQR----EDQEQLQEEIKRLNKQLAQRSSiDNENLV 1651
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAElaRLEQDIarleERRRELEERLEELEEELAELEE-ELEELE 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1652 SERERVLLEELEALKQLSLAGREKlccELRNSSTQTQNGNENQGEAEEQTFKEKELDRKPEHvppEILSNERYALQKANN 1731
Cdd:COG1196 337 EELEELEEELEEAEEELEEAEAEL---AEAEEALLEAEAELAEAEEELEELAEELLEALRAA---AELAAQLEELEEAEE 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1732 RLLKILLEVVKTTAAVEETIGRHVLGILDRSSKSQSSASLIWRSEAEASVKSCVHEEHTRVTDESIPSYSGSDMPRNDin 1811
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAE-- 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1812 mwsKVTEEGTELSQRLVRSGFAGTEIDPENEELVLNISSRLQ------AAVEKLLEAISETSSQLEHAKVTQTELMRESF 1885
Cdd:COG1196 489 ---AAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAvligveAAYEAALEAALAAALQNIVVEDDEVAAAAIEY 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1886 --RQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQEllcasNRLQE 1963
Cdd:COG1196 566 lkAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAA-----LRRAV 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1964 LEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELE 2043
Cdd:COG1196 641 TLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEE 720
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 2044 QEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHE---RDVFQQEIQKLEQQLK 2097
Cdd:COG1196 721 LEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEppdLEELERELERLEREIE 777
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
700-899 |
1.35e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 700 SKLKDLQQSLvnsksEEMTLQINELQKEIEILRQEEKEkgtLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSI 779
Cdd:COG4942 27 AELEQLQQEI-----AELEKELAALKKEEKALLKQLAA---LERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 780 LKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEV 859
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1622925510 860 NYQELQEEYACLLKVKDD---LEDSKNKQELEYKSKLKALNEE 899
Cdd:COG4942 179 LLAELEEERAALEALKAErqkLLARLEKELAELAAELAELQQE 221
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1886-2432 |
1.71e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1886 RQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQELlCASNRLQELE 1965
Cdd:TIGR00618 307 QQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQH-TLTQHIHTLQ 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1966 AEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQET-EKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQ 2044
Cdd:TIGR00618 386 QQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRdLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESA 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2045 EKNAELMDLRQQNQALEKQLEKMRK----FLDEQAidrEHERDVFQQEIQ----------------KLEQQLKVVPRFQP 2104
Cdd:TIGR00618 466 QSLKEREQQLQTKEQIHLQETRKKAvvlaRLLELQ---EEPCPLCGSCIHpnparqdidnpgpltrRMQRGEQTYAQLET 542
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2105 ISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAK 2184
Cdd:TIGR00618 543 SEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2185 PELSLEVQLQAERDAIDRKEKEITNLE-EQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKL 2263
Cdd:TIGR00618 623 PEQDLQDVRLHLQQCSQELALKLTALHaLQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQC 702
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2264 GLAIKESDAV---STQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDL-----ETQIEC 2335
Cdd:TIGR00618 703 QTLLRELETHieeYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTaalqtGAELSH 782
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2336 LMSDQECVKRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLdmviAEKLALEQQVETTNEEMTFTK 2415
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRL----EEKSATLGEITHQLLKYEECS 858
|
570
....*....|....*..
gi 1622925510 2416 NILKETNFKMNQLTQEL 2432
Cdd:TIGR00618 859 KQLAQLTQEQAKIIQLS 875
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
319-547 |
1.74e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 319 SNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLM 398
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 399 GTVEELqkrnhkdsqfeTDIVQRMEQETQRKL-----EQLRAELDEMYGQQIVQMKQELIRQHVSQMEELKTRHKGEMEN 473
Cdd:COG4942 104 EELAEL-----------LRALYRLGRQPPLALllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 474 ALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRA 547
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
2013-2310 |
1.75e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 51.11 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2013 QAEKVrDDLQKQVKALEIDVEEQVsrfiELEQEKNAELMDLRQQNQALEKQLEKMRKFLD--EQAIDREHERDV-FQQEI 2089
Cdd:COG3096 345 QQEKI-ERYQEDLEELTERLEEQE----EVVEEAAEQLAEAEARLEAAEEEVDSLKSQLAdyQQALDVQQTRAIqYQQAV 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2090 QKLE--QQLKVVP------------RFQPISEHQTREVEQLTNHL------KEKTDKCSELLLS--------------KE 2135
Cdd:COG3096 420 QALEkaRALCGLPdltpenaedylaAFRAKEQQATEEVLELEQKLsvadaaRRQFEKAYELVCKiageversqawqtaRE 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2136 QLQ--RDIQERNEEIEKLEFRVRELEQALlvsadtfqkvedRKQFGAVEAKPELSleVQLQAERDAIDrkekEITNLEEQ 2213
Cdd:COG3096 500 LLRryRSQQALAQRLQQLRAQLAELEQRL------------RQQQNAERLLEEFC--QRIGQQLDAAE----ELEELLAE 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2214 LEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKL-------GLAIKESDAVSTQDQHVLfgkfa 2286
Cdd:COG3096 562 LEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALerlreqsGEALADSQEVTAAMQQLL----- 636
|
330 340
....*....|....*....|....
gi 1622925510 2287 qiiqEKEVEIDQLNEQIMKLQQQL 2310
Cdd:COG3096 637 ----EREREATVERDELAARKQAL 656
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
231-845 |
1.88e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 231 LTEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQE---KIKV 307
Cdd:TIGR00618 199 LTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEElraQEAV 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 308 YEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLT---------AADKLLGELQEQVVQKNQEIKNMKL 378
Cdd:TIGR00618 279 LEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAkllmkraahVKQQSSIEEQRRLLQTLHSQEIHIR 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 379 ELTNSKQKERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQ---------LRAELDEMYGQQIVQMK 449
Cdd:TIGR00618 359 DAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtrtsafrdLQGQLAHAKKQQELQQR 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 450 ----QELIRQHVSQMEELKTRHKGEMENALR-------SYPNITVNEDQIKLMNVAI---------------NELNIKLQ 503
Cdd:TIGR00618 439 yaelCAAAITCTAQCEKLEKIHLQESAQSLKereqqlqTKEQIHLQETRKKAVVLARllelqeepcplcgscIHPNPARQ 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 504 D------TNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVS 577
Cdd:TIGR00618 519 DidnpgpLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQD 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 578 ASESRKELELKHEAEVTNYKIKLEmlekEKNAVLDRMAESQEAElERLRTQLLFSHEEELSKLKEDLEiEHQINIEKLKD 657
Cdd:TIGR00618 599 LTEKLSEAEDMLACEQHALLRKLQ----PEQDLQDVRLHLQQCS-QELALKLTALHALQLTLTQERVR-EHALSIRVLPK 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 658 NLGIHYKQQIDGLQNEMSQ--KIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ---INELQKEIEILR 732
Cdd:TIGR00618 673 ELLASRQLALQKMQSEKEQltYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAARedaLNQSLKELMHQA 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 733 QEEKEKGTLEQEVQELQLKIEL--------LEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLI 804
Cdd:TIGR00618 753 RTVLKARTEAHFNNNEEVTAALqtgaelshLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQ 832
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1622925510 805 FIDSIKSKSKDSVwekEIEILTEENEDLKQQCIQLNEEIEK 845
Cdd:TIGR00618 833 FLSRLEEKSATLG---EITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
153-1006 |
1.93e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.20 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 153 SLTHLEMMESELAGKQHEIEELNRELEEMRVTYGTEGLQQLQEFEAaIKQRDGiitqltanlQQARREKDETMREFLELT 232
Cdd:TIGR00606 263 KIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYH-NHQRTV---------REKERELVDCQRELEKLN 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 233 EQSQKLQiqfqqLQASETLRNSTHSSTAADLLQAKQQIRTHQQQlEEQDHLLEDYQKKKEDFTMQISFLQEkIKVYEMEQ 312
Cdd:TIGR00606 333 KERRLLN-----QEKTELLVEQGRLQLQADRHQEHIRARDSLIQ-SLATRLELDGFERGPFSERQIKNFHT-LVIERQED 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 313 DKKVENSNKEEIQEKETIIEELNTKIieeekktlelKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSE 392
Cdd:TIGR00606 406 EAKTAAQLCADLQSKERLKQEQADEI----------RDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 393 EIKQLMGTVEELQKRNhKDSQFETDI-----VQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHVS----QMEEL 463
Cdd:TIGR00606 476 LDQELRKAERELSKAE-KNSLTETLKkevksLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMdkdeQIRKI 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 464 KTRHKGEMENALRSYPNITVNED-------QIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQL------ 530
Cdd:TIGR00606 555 KSRHSDELTSLLGYFPNKKQLEDwlhskskEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdvcgs 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 531 EDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVED--------------LKAEIVSASESRKELELKHEAEVTNY 596
Cdd:TIGR00606 635 QDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDenqsccpvcqrvfqTEAELQEFISDLQSKLRLAPDKLKST 714
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 597 KIKLEMLEKEKNAVLDrMAESQEAELERLrtqllfshEEELSKLKEDLEiEHQINIEKLKDNLGIHYKQqidgLQNEMSQ 676
Cdd:TIGR00606 715 ESELKKKEKRRDEMLG-LAPGRQSIIDLK--------EKEIPELRNKLQ-KVNRDIQRLKNDIEEQETL----LGTIMPE 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 677 KIETMQFEKDNLITKQNQLILEISKlKDLQQSLVNSKSEEMTLQINELQKEIEilrQEEKEKGTLEQEVQELQLKIELLE 756
Cdd:TIGR00606 781 EESAKVCLTDVTIMERFQMELKDVE-RKIAQQAAKLQGSDLDRTVQQVNQEKQ---EKQHELDTVVSKIELNRKLIQDQQ 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 757 KQMKEkendLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSKSKDSVWEKEIEILTEENEDLKQQC 836
Cdd:TIGR00606 857 EQIQH----LKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSK 932
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 837 IQLNEEIEKQRNTFSFAEKNFEVNYQELQEeyacllKVKDDLEDSKNKQELEYKSKLKALNE-ELHLQRINPTTVKTKSS 915
Cdd:TIGR00606 933 ETSNKKAQDKVNDIKEKVKNIHGYMKDIEN------KIQDGKDDYLKQKETELNTVNAQLEEcEKHQEKINEDMRLMRQD 1006
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 916 VfdedktfvaETLEMGEVVEKDTTELMEKLEVTKREKLELSQRLADLSE-QLKQKHGEISFLNEEVKSLKQEKEQVLLRC 994
Cdd:TIGR00606 1007 I---------DTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQmQVLQMKQEHQKLEENIDLIKRNHVLALGRQ 1077
|
890
....*....|..
gi 1622925510 995 RELEIIINHNRA 1006
Cdd:TIGR00606 1078 KGYEKEIKHFKK 1089
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1980-2765 |
2.11e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.74 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1980 RQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQA 2059
Cdd:pfam02463 205 QAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQ 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2060 LEKQLEKMRKFLDEqaidreherdvfQQEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTdkcSELLLSKEQLQR 2139
Cdd:pfam02463 285 EEELKLLAKEEEEL------------KSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEI---EELEKELKELEI 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2140 DIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFRE 2219
Cdd:pfam02463 350 KREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEEL 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2220 ELENKNEEVQQLhmqleIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQL 2299
Cdd:pfam02463 430 EILEEEEESIEL-----KQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2300 NEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSL 2379
Cdd:pfam02463 505 ARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2380 PEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNilkeTNFKMNQLTQELFSLKRERESMEKIQSIPGKSVNMAIDD 2459
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKR----AKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2460 MSKDKPELEVVLTEDALKSLENQTYLKSFEENGKGSiinletRLLQLESTVRAKDLELTQCYKQIKDMQEQGQSEIEVLQ 2539
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQELQEKAESELAKEEILR------RQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKI 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2540 KKILN-LQKILEEKVAAALVSQIQLEAVQEYAKFCQDNQTISSEPERTNIQNLNQLREDEsgsnisaLTLRISELESQLV 2618
Cdd:pfam02463 735 NEELKlLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEE-------KLKAQEEELRALE 807
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2619 EMHTSLILGKEQVEIAEKNVLEKEKKLLELQKLLEGNEKKQGGKERKRSPQDFEVLKTTTELFHSNEESGFLNELEALRA 2698
Cdd:pfam02463 808 EELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDE 887
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 2699 ESVATKAQLTGYKEKTEKLQ--GELLIKETNMASLQKDLSQVRDHLAEAKEKLSILEKEDKTAVQENKK 2765
Cdd:pfam02463 888 LESKEEKEKEEKKELEEESQklNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKE 956
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
2200-2552 |
2.31e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2200 IDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQL---EIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQ 2276
Cdd:TIGR04523 28 ANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLnkdEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2277 DQHVLFGKFAQIIQeKEVEIDQLNEQIMKLQQQLK-----ITTDNKVIEEKNELIRDLETQIECLmsdqECVKRNREEEI 2351
Cdd:TIGR04523 108 INSEIKNDKEQKNK-LEVELNKLEKQKKENKKNIDkflteIKKKEKELEKLNNKYNDLKKQKEEL----ENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2352 EQLNEVIEKLQQELaNIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQE 2431
Cdd:TIGR04523 183 LNIQKNIDKIKNKL-LKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2432 LFSLKREREsmEKIQSIpgKSVNMAIDDMSKDKPELEVVLTEdaLKSLENQTY---LKSFEENGKGSIINLETRLLQLES 2508
Cdd:TIGR04523 262 QNKIKKQLS--EKQKEL--EQNNKKIKELEKQLNQLKSEISD--LNNQKEQDWnkeLKSELKNQEKKLEEIQNQISQNNK 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1622925510 2509 TVRAKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEEK 2552
Cdd:TIGR04523 336 IISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKEN 379
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1992-2443 |
3.04e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 50.12 E-value: 3.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1992 VEQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALeIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFL 2071
Cdd:pfam05557 14 LQNEKKQMELEHKRARIELEKKASALKRQLDRESDRN-QELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2072 DEQAIDREHERDV----------FQQEIQKLEQQLKvvprfqpiseHQTREVEQLTNHLKEKTDKCSELllskEQLQRDI 2141
Cdd:pfam05557 93 NEKESQLADAREVisclknelseLRRQIQRAELELQ----------STNSELEELQERLDLLKAKASEA----EQLRQNL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2142 QERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQfgAVEAKPELSLEVQLQAERDAIDRKEKEITN-LEEQLEQFREE 2220
Cdd:pfam05557 159 EKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKS--ELARIPELEKELERLREHNKHLNENIENKLlLKEEVEDLKRK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2221 LEnKNEEVQQLHMQLEIQKKESTTRLQELEqenKLFKDDmeklGLAIKESDAVSTQDQHVLFG-------KFAQIIQEKE 2293
Cdd:pfam05557 237 LE-REEKYREEAATLELEKEKLEQELQSWV---KLAQDT----GLNLRSPEDLSRRIEQLQQReivlkeeNSSLTSSARQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2294 VEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLN------------EVIEKL 2361
Cdd:pfam05557 309 LEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDKELTmsnyspqlleriEEAEDM 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2362 QQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETtnEEMTFTKNILKETNFKMNQLTQELFSLKRERES 2441
Cdd:pfam05557 389 TQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESL--ADPSYSKEEVDSLRRKLETLELERQRLREQKNE 466
|
..
gi 1622925510 2442 ME 2443
Cdd:pfam05557 467 LE 468
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
134-429 |
3.12e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.12 E-value: 3.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 134 LREEEFGVDDSYSEQGAQYSLTHLEMMESELAGKQHEIEELNRELEEMRVTYGTEGLQQLQEFEaaikqrdgiitqltaN 213
Cdd:pfam17380 318 LEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMRELE---------------R 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 214 LQQARREKDETMREFLElteQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQqiRTHQQQLEEQDHLLEDYQKKKED 293
Cdd:pfam17380 383 LQMERQQKNERVRQELE---AARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQ--REVRRLEEERAREMERVRLEEQE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 294 FTMQISFLQEKikvyemEQDKKVENSNKEEIQEKETIIEELNTKIIEEE-----KKTLELKDKLTAADKLLGELQEQVVQ 368
Cdd:pfam17380 458 RQQQVERLRQQ------EEERKRKKLELEKEKRDRKRAEEQRRKILEKEleerkQAMIEEERKRKLLEKEMEERQKAIYE 531
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 369 KNQEiknMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRK 429
Cdd:pfam17380 532 EERR---REAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
535-764 |
3.84e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 3.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 535 EELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRM 614
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 615 AESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQnemsQKIETMQFEKDNLITKQNQ 694
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELR----ADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 695 LILEISKLKDLQQSLVNSKSEEMTLqINELQKEIEILRQEEKEkgtLEQEVQELQLKIELLEKQMKEKEN 764
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKL-LARLEKELAELAAELAE---LQQEAEELEALIARLEAEAAAAAE 241
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
454-1198 |
3.98e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 3.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 454 RQHVSQMEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELNIKLQDTNSQKEKLK--EELGVILEEKCALQ-RQL 530
Cdd:PTZ00121 1063 KAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEARKAEDaRKA 1142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 531 EDLFEELSFSREQIQRArqtiAEQESKLNEAQKSlstvEDLKaeivSASESRKELELKHEAEVTNYKIKLEMLEKEKNAV 610
Cdd:PTZ00121 1143 EEARKAEDAKRVEIARK----AEDARKAEEARKA----EDAK----KAEAARKAEEVRKAEELRKAEDARKAEAARKAEE 1210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 611 LDRMAESQEAELERlRTQLLFSHEEELSKLKEDLEIEHQIN---IEKLKDNLGIHYKQQIDGLQNEMSQKIEtmqfekdn 687
Cdd:PTZ00121 1211 ERKAEEARKAEDAK-KAEAVKKAEEAKKDAEEAKKAEEERNneeIRKFEEARMAHFARRQAAIKAEEARKAD-------- 1281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 688 litkqnqlilEISKLKDLQQSLVNSKSEEMTlQINELQKEIEilrqEEKEKGTLEQEVQELQLKIELLEKQMKE-KENDL 766
Cdd:PTZ00121 1282 ----------ELKKAEEKKKADEAKKAEEKK-KADEAKKKAE----EAKKADEAKKKAEEAKKKADAAKKKAEEaKKAAE 1346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 767 QEKFTQLEAENSILKDEKKALEDMLKihtpdnQEERLIFIDSIKSKSKDsvwEKEIEILTEENEDLKQQCIQLNEEIEKQ 846
Cdd:PTZ00121 1347 AAKAEAEAAADEAEAAEEKAEAAEKK------KEEAKKKADAAKKKAEE---KKKADEAKKKAEEDKKKADELKKAAAAK 1417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 847 RNTFSFAEKNFEVNYQELQEEYACLLKVKDDL----EDSKNKQELEYKSKLKALNEELhlqrinpttvKTKSsvfdEDKT 922
Cdd:PTZ00121 1418 KKADEAKKKAEEKKKADEAKKKAEEAKKADEAkkkaEEAKKAEEAKKKAEEAKKADEA----------KKKA----EEAK 1483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 923 FVAETLEMGEVVEKDTTELMEKLEVTKR----EKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQ-EKEQVLLRCREL 997
Cdd:PTZ00121 1484 KADEAKKKAEEAKKKADEAKKAAEAKKKadeaKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADElKKAEELKKAEEK 1563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 998 EIIINHNRAGNVQSCDTQVSSLSDGVVTMTSRDAEGSVSKVNKSFGEESKIMVEDKVSFENMTTGKESKQEQLILDHLPS 1077
Cdd:PTZ00121 1564 KKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEA 1643
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1078 VTKESSLRAAQPSENDKLQKELNVLKSEQN-----DLRLQMEAQRICLSLVY-----STHVDQVREYMENEKDKALCSLK 1147
Cdd:PTZ00121 1644 EEKKKAEELKKAEEENKIKAAEEAKKAEEDkkkaeEAKKAEEDEKKAAEALKkeaeeAKKAEELKKKEAEEKKKAEELKK 1723
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1148 ---------EELISAQEEKIKELQKIHQLELQNTKTQETGDEGKPLHLLIGKLRKAVSEE 1198
Cdd:PTZ00121 1724 aeeenkikaEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
3068-3367 |
4.32e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.67 E-value: 4.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3068 QRIQEQGVEYQAAMEYLQKADRRSLLSEIQALHAQMNGRKITLKREQENEKSSQElleyNIQQKQSQMLEMQVELSSMKD 3147
Cdd:TIGR02168 206 ERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTA----ELQELEEKLEELRLEVSELEE 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3148 RATELQ------------------------EQLSSEKMVVAELRSELAQTKLELETTLKAQHKHLKELEAFRLEVKDKTD 3203
Cdd:TIGR02168 282 EIEELQkelyalaneisrleqqkqilrerlANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3204 EVHLLNDTLASEQKKSRELQWALEKEKAKLGHSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQ-QKIESQ 3282
Cdd:TIGR02168 362 ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElKELQAE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3283 RMLYDAQLSEEHGRNLELQVLLESEKVRIREMSSTLDRERELHAQLQSNdgtgqsrpslpsEDLLKELQKQLEEKHSRIV 3362
Cdd:TIGR02168 442 LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR------------LDSLERLQENLEGFSEGVK 509
|
....*
gi 1622925510 3363 ELLNE 3367
Cdd:TIGR02168 510 ALLKN 514
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
214-629 |
4.43e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 4.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 214 LQQARREKDETMREFLELTEQSQKLQIQFQQLQASET-----LRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQ 288
Cdd:COG4717 76 LEEELKEAEEKEEEYAELQEELEELEEELEELEAELEelreeLEKLEKLLQLLPLYQELEALEAELAELPERLEELEERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 289 KKKEDFTMQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNtkiieeekktlELKDKLTAADKLLGELQEQVVQ 368
Cdd:COG4717 156 EELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELE-----------ELQQRLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 369 KNQEIKNMKLELTNSKQKERQSSEEIKQL-MGTVEELQKRNHKDSQFETDI----------VQRMEQETQRKLEQLRAEL 437
Cdd:COG4717 225 LEEELEQLENELEAAALEERLKEARLLLLiAAALLALLGLGGSLLSLILTIagvlflvlglLALLFLLLAREKASLGKEA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 438 DEMYGQQIVQMKQELirqhvsQMEELKTRHKGEMENALRSYPNITVNEDQIKLMNVAINELN--IKLQDTNSQKEKLKEE 515
Cdd:COG4717 305 EELQALPALEELEEE------ELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEeeLQLEELEQEIAALLAE 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 516 LGV----ILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEaqkslstvEDLKAEIVSASESRKELELKHE- 590
Cdd:COG4717 379 AGVedeeELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE--------EELEEELEELEEELEELEEELEe 450
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1622925510 591 --AEVTNYKIKLEMLEKeknavlDRMAESQEAELERLRTQL 629
Cdd:COG4717 451 lrEELAELEAELEQLEE------DGELAELLQELEELKAEL 485
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
3139-3446 |
5.15e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.67 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3139 QVELSSMKDRATELQEQLSSEKMVVAELRSELAqtklELETTLKAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKK 3218
Cdd:TIGR02168 224 ELELALLVLRLEELREELEELQEELKEAEEELE----ELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3219 srelqwaLEKEKAKLGHSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYD---AQLSEEHG 3295
Cdd:TIGR02168 300 -------LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEeleAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3296 RNLELQVLLESEKVRIREMSSTLDRERelhAQLQSNdgtgqsrpslpsEDLLKELQKQLEEKHSRIVELLNETEKYKLDS 3375
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLELQIASLN---NEIERL------------EARLERLEDRRERLQQEIEELLKKLEEAELKE 437
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 3376 LQTRQqmekdrqvhrktlqteqeanTEGQKKMHELQSKVEDLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQ 3446
Cdd:TIGR02168 438 LQAEL--------------------EELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQ 488
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
161-681 |
5.50e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 5.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 161 ESELAGKQHEIEELNRELEEMRVTYGTEGLQQLQEFEAAIKqrdgiitqltanlqQARREKDETMREFLELTEQSQKLQI 240
Cdd:COG4913 308 EAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIE--------------RLERELEERERRRARLEALLAALGL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 241 QFqqlqasetlrnsthSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQ----KKKEDFTMQISFLQEKIKVYEmeqdKKV 316
Cdd:COG4913 374 PL--------------PASAEEFAALRAEAAALLEALEEELEALEEALaeaeAALRDLRRELRELEAEIASLE----RRK 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 317 ENSNKEEIQEKETIIEELNtkIIEEEKK----TLELKDK----LTAADKLLGEL-------QEQVVQKNQEIKNMKLelt 381
Cdd:COG4913 436 SNIPARLLALRDALAEALG--LDEAELPfvgeLIEVRPEeerwRGAIERVLGGFaltllvpPEHYAAALRWVNRLHL--- 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 382 nskqKERQSSEEIKQlmGTVEELQKRNHKDSqfetdIVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHVS--- 458
Cdd:COG4913 511 ----RGRLVYERVRT--GLPDPERPRLDPDS-----LAGKLDFKPHPFRAWLEAELGRRFDYVCVDSPEELRRHPRAitr 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 459 --QMEELKTRHKGEMENALRSYPNI-TVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRqledlFE 535
Cdd:COG4913 580 agQVKGNGTRHEKDDRRRIRSRYVLgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR-----LA 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 536 ELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAevtnykiklemLEKEKNAVLDRMA 615
Cdd:COG4913 655 EYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDE-----------LKGEIGRLEKELE 723
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 616 ESQEaELERLRTQLLFSHEEELSKLKEDLEIE-HQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETM 681
Cdd:COG4913 724 QAEE-ELDELQDRLEAAEDLARLELRALLEERfAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1899-2231 |
6.14e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 6.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1899 EDLRERLHEESRAREQ------LAVELSKAEGVIdgYADEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQ 1972
Cdd:TIGR02169 194 DEKRQQLERLRREREKaeryqaLLKEKREYEGYE--LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1973 EERELLSRQKEAMKAEagpveqqllqETEKLMKEKLEVQCQAEKVRDDLQKQVKALEiDVEEQVSRFIELEQEKNAELMD 2052
Cdd:TIGR02169 272 QLLEELNKKIKDLGEE----------EQLRVKEKIGELEAEIASLERSIAEKERELE-DAEERLAKLEAEIDKLLAEIEE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2053 LRQQNQALEKQLEKmrkfLDEQAIDREHERDVFQQEIQKLEQQLKVVprFQPISEHQtREVEQLTNHLKEKTDKCSELLL 2132
Cdd:TIGR02169 341 LEREIEEERKRRDK----LTEEYAELKEELEDLRAELEEVDKEFAET--RDELKDYR-EKLEKLKREINELKRELDRLQE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2133 SKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQfgaveakpelSLEVQLQAERDAIDRKEKEITNLEE 2212
Cdd:TIGR02169 414 ELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE----------QLAADLSKYEQELYDLKEEYDRVEK 483
|
330
....*....|....*....
gi 1622925510 2213 QLEQFREELENKNEEVQQL 2231
Cdd:TIGR02169 484 ELSKLQRELAEAEAQARAS 502
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1854-2444 |
8.29e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.07 E-value: 8.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1854 AAVEKLLEAISETSSQLEHAKVTQTELMRE---SFRQKQEATE-SLKCQEDLRERLHEESRAREQLAVELSKA--EGVID 1927
Cdd:pfam12128 318 AKDRSELEALEDQHGAFLDADIETAAADQEqlpSWQSELENLEeRLKALTGKHQDVTAKYNRRRSKIKEQNNRdiAGIKD 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1928 GYADEKTLFERQIQEKTDIIDRLEQEL---LCASNRLQELEAEQQQIQEERELLsRQKEAMKAEAGPVEQQLLQETEKLM 2004
Cdd:pfam12128 398 KLAKIREARDRQLAVAEDDLQALESELreqLEAGKLEFNEEEYRLKSRLGELKL-RLNQATATPELLLQLENFDERIERA 476
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2005 KEKLEvqcQAEKVRDDLQKQVKALEIDVEEQVSRFieleQEKNAELMDLRQQNQALEKQLE----KMRKFLDEQAID-RE 2079
Cdd:pfam12128 477 REEQE---AANAEVERLQSELRQARKRRDQASEAL----RQASRRLEERQSALDELELQLFpqagTLLHFLRKEAPDwEQ 549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2080 HERDVFQQEiqkLEQQLKVVPRFQPISEHQTREVEQLTNHLKektdkcselllskeqlQRDIQERNEEIEKLEFRVRELE 2159
Cdd:pfam12128 550 SIGKVISPE---LLHRTDLDPEVWDGSVGGELNLYGVKLDLK----------------RIDVPEWAASEEELRERLDKAE 610
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2160 QALlvsadtfQKVEDRKQfgaveakpelSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQ- 2238
Cdd:pfam12128 611 EAL-------QSAREKQA----------AAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKAl 673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2239 ---KKESTTRLQELEQENKLFKDDMEKLGLAIKE-SDAVSTQDQHvlfgKFAQIIQEKEVEIDQLNEQIMKLQQQLKITT 2314
Cdd:pfam12128 674 aerKDSANERLNSLEAQLKQLDKKHQAWLEEQKEqKREARTEKQA----YWQVVEGALDAQLALLKAAIAARRSGAKAEL 749
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2315 DNKVIEEKNEL----------------IRDLETQIECLMSDQECVKR--------------NREEEIEQLNEVIEKLQQE 2364
Cdd:pfam12128 750 KALETWYKRDLaslgvdpdviaklkreIRTLERKIERIAVRRQEVLRyfdwyqetwlqrrpRLATQLSNIERAISELQQQ 829
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2365 LANIGQKTLVDAHSLPEEADSLKHQLDMVIAE--KLALEQQVETTNEEMTFTKNILKETNFKMNQLTQELFSLKRERESM 2442
Cdd:pfam12128 830 LARLIADTKLRRAKLEMERKASEKQQVRLSENlrGLRCEMSKLATLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESV 909
|
..
gi 1622925510 2443 EK 2444
Cdd:pfam12128 910 KK 911
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
684-1006 |
9.34e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 48.39 E-value: 9.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 684 EKDNLITK-QNQLILEIsklKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQ-LKIELLEKQMKE 761
Cdd:PRK05771 17 YKDEVLEAlHELGVVHI---EDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSvKSLEELIKDVEE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 762 KENDLQEKFTQLEAENSILKDEKKALEDMLKihtpdnqeerlifidsikskskdsvwekEIEILTEenedlkqqciqLNE 841
Cdd:PRK05771 94 ELEKIEKEIKELEEEISELENEIKELEQEIE----------------------------RLEPWGN-----------FDL 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 842 EIEKQRNTfsfaeKNFEVNYQELQEEYACLLKvkddLEDSKNKQELEYKSKLKALneelhlqrINPTTVKtkssvfdEDK 921
Cdd:PRK05771 135 DLSLLLGF-----KYVSVFVGTVPEDKLEELK----LESDVENVEYISTDKGYVY--------VVVVVLK-------ELS 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 922 TFVAETLEMGEVVEKDTtelmeklevtkREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRE-LEII 1000
Cdd:PRK05771 191 DEVEEELKKLGFERLEL-----------EEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEyLEIE 259
|
....*.
gi 1622925510 1001 INHNRA 1006
Cdd:PRK05771 260 LERAEA 265
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
356-788 |
9.66e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 48.92 E-value: 9.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 356 DKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKR--NHKDSQFETDIVQRMEQeTQRKLEQL 433
Cdd:COG5022 809 RKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRfsLLKKETIYLQSAQRVEL-AERQLQEL 887
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 434 RAELDEM-----YGQQIVQMKQELIRQHVSQME---ELKTRHKGEMENALRsypNITVNEDQIKlmNVAINELNIKLQDT 505
Cdd:COG5022 888 KIDVKSIsslklVNLELESEIIELKKSLSSDLIenlEFKTELIARLKKLLN---NIDLEEGPSI--EYVKLPELNKLHEV 962
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 506 NSQKEKLKEELGVILEekcalqrQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVS-------- 577
Cdd:COG5022 963 ESKLKETSEEYEDLLK-------KSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAElqsaskii 1035
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 578 ASESRKELELKHEAEVTNykikleMLEKEKNAVLDRMaesqEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKD 657
Cdd:COG5022 1036 SSESTELSILKPLQKLKG------LLLLENNQLQARY----KALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTN 1105
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 658 NlgihykqqiDGLQNEMSQKIETMQFEKDNLITKQNQLILeiSKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKE 737
Cdd:COG5022 1106 R---------NLVKPANVLQFIVAQMIKLNLLQEISKFLS--QLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF 1174
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 738 KGTLEQE---VQELQLKIELLEKQMKEKENDLQEKFtQLEAENSILKDEKKALE 788
Cdd:COG5022 1175 AALSEKRlyqSALYDEKSKLSSSEVNDLKNELIALF-SKIFSGWPRGDKLKKLI 1227
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
2033-2270 |
9.67e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 48.39 E-value: 9.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2033 EEQVSRFIELEQEKNAE-LMDLRQQNQALEKQLEKMRKFLDEQAIDREHERDVFQQEIQKLEQQL-----KVVPRfqpIS 2106
Cdd:PRK05771 27 ELGVVHIEDLKEELSNErLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVeeeleKIEKE---IK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2107 EhQTREVEQLTNHLKEKTDKCSEL------------LLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADT------ 2168
Cdd:PRK05771 104 E-LEEEISELENEIKELEQEIERLepwgnfdldlslLLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKgyvyvv 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2169 -FQKVEDRKQFGAVEAKPELSlEVQLQAER---DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQ----LEIQKK 2240
Cdd:PRK05771 183 vVVLKELSDEVEEELKKLGFE-RLELEEEGtpsELIREIKEELEEIEKERESLLEELKELAKKYLEELLAlyeyLEIELE 261
|
250 260 270
....*....|....*....|....*....|....*..
gi 1622925510 2241 ESTTRLQELEqENKLF-------KDDMEKLGLAIKES 2270
Cdd:PRK05771 262 RAEALSKFLK-TDKTFaiegwvpEDRVKKLKELIDKA 297
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1899-2445 |
1.01e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1899 EDLRERLHEESRAREQLAVELSKAEGV---IDGYADEKTLFERQIQEKTDIIDRLEQELLCASNRLQeleaEQQQIQEER 1975
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTENIeelIKEKEKELEEVLREINEISSELPELREELEKLEKEVK----ELEELKEEI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1976 ELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALE-IDVEEQVSRFIELEQEKNAELMDLR 2054
Cdd:PRK03918 241 EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEyIKLSEFYEEYLDELREIEKRLSRLE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2055 QQNQALEKQLEKMRKfLDEQAIDREHERDVFQQEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTDKCSELL-LS 2133
Cdd:PRK03918 321 EEINGIEERIKELEE-KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELeKA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2134 KEQLQRDIQERNEEIEKLEFRVRELEQAL--LVSADTFQKVEDRKqfgaVEAKPELSLEVQLQAERDAIDRKEKEITNLE 2211
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKAIeeLKKAKGKCPVCGRE----LTEEHRKELLEEYTAELKRIEKELKEIEEKE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2212 EQLEQFREELE---NKNEEVQQLHMQLE----IQKKESTTRLQELEQENKLFKDDMEKLG-----LAIKESDAVSTQDQH 2279
Cdd:PRK03918 476 RKLRKELRELEkvlKKESELIKLKELAEqlkeLEEKLKKYNLEELEKKAEEYEKLKEKLIklkgeIKSLKKELEKLEELK 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2280 VLFGKFAQIIQEKEVEIDQLNEQIMKL------QQQLKITTDNKVIEEKNELiRDLETQIECLMSDQECVKRNREEEIEQ 2353
Cdd:PRK03918 556 KKLAELEKKLDELEEELAELLKELEELgfesveELEERLKELEPFYNEYLEL-KDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2354 LNEV---IEKLQQELANIGQKTLVDAH-SLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKEtnfkMNQLT 2429
Cdd:PRK03918 635 LAETekrLEELRKELEELEKKYSEEEYeELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEE----REKAK 710
|
570
....*....|....*.
gi 1622925510 2430 QELFSLKRERESMEKI 2445
Cdd:PRK03918 711 KELEKLEKALERVEEL 726
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
503-782 |
1.03e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 48.63 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 503 QDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESR 582
Cdd:pfam01576 204 QELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESE 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 583 KELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEaelerLRTQllfsHEEELSKLKEDLEIEHQInieklkdnlgih 662
Cdd:pfam01576 284 RAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQE-----LRSK----REQEVTELKKALEEETRS------------ 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 663 YKQQIDGLQNEMSQKIETMQFEKDNliTKQNQLILEISKlkdlqQSLVNskseemtlQINELQKEIEILRQ----EEKEK 738
Cdd:pfam01576 343 HEAQLQEMRQKHTQALEELTEQLEQ--AKRNKANLEKAK-----QALES--------ENAELQAELRTLQQakqdSEHKR 407
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1622925510 739 GTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKD 782
Cdd:pfam01576 408 KKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNE 451
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
525-986 |
1.07e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.50 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 525 ALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEA---EVTNYKIKLE 601
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREElaeEVRDLRERLE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 602 MLEKEKNAVLDrmaesqEAELERLRTQLLFSHEEELSKLKEDLEIEhqinIEKLKDNLGIHyKQQIDGLQnemsQKIETM 681
Cdd:PRK02224 290 ELEEERDDLLA------EAGLDDADAEAVEARREELEDRDEELRDR----LEECRVAAQAH-NEEAESLR----EDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 682 QFEKDNLITKQNQLILEISKLKdlqqslvnSKSEEMTLQINELQKEIEILRqeeKEKGTLEQEVQELQLKIELLEkqmkE 761
Cdd:PRK02224 355 EERAEELREEAAELESELEEAR--------EAVEDRREEIEELEEEIEELR---ERFGDAPVDLGNAEDFLEELR----E 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 762 KENDLQEKFTQLEAENSILKD---EKKALEDMLKIHTPDNQEERLIFIDSIKSKskdsvwEKEIEILTEENEDLKQQCIQ 838
Cdd:PRK02224 420 ERDELREREAELEATLRTARErveEAEALLEAGKCPECGQPVEGSPHVETIEED------RERVEELEAELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 839 LNEEIEKQRnTFSFAEKNFEV------NYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQRINPTTVKT 912
Cdd:PRK02224 494 VEERLERAE-DLVEAEDRIERleerreDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEARE 572
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 913 KSSVFDEDKTFVAETLEMGEVVEkdttELMEKLEVTKREKLELSQRLADLSEQLKQKHGEISFLNEEVKSLKQE 986
Cdd:PRK02224 573 EVAELNSKLAELKERIESLERIR----TLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAE 642
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
444-683 |
1.11e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 444 QIVQMKQ-----ELIRQHV---SQMEELKTRHKGEMENALRSYPNITVNEDQIKLMN--VAINELNIKLQDTNSQKEKLK 513
Cdd:COG4913 199 KTQSFKPigdldDFVREYMleePDTFEAADALVEHFDDLERAHEALEDAREQIELLEpiRELAERYAAARERLAELEYLR 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 514 EELGVILEEKCA--LQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLST-----VEDLKAEIVSASESRKELE 586
Cdd:COG4913 279 AALRLWFAQRRLelLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGnggdrLEQLEREIERLERELEERE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 587 LKHEaevtNYKIKLEMLE----------KEKNAVLDRMAESQEAELERLRTQlLFSHEEELSKLKEDL-EIEHQIN-IEK 654
Cdd:COG4913 359 RRRA----RLEALLAALGlplpasaeefAALRAEAAALLEALEEELEALEEA-LAEAEAALRDLRRELrELEAEIAsLER 433
|
250 260
....*....|....*....|....*....
gi 1622925510 655 LKDNLGIHYKQQIDGLQNEMSQKIETMQF 683
Cdd:COG4913 434 RKSNIPARLLALRDALAEALGLDEAELPF 462
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
489-776 |
1.24e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 489 KLMNVAINELNikLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSF---SREQIQRARQTIAEQ------ESKLN 559
Cdd:COG3206 94 PVLERVVDKLN--LDEDPLGEEASREAAIERLRKNLTVEPVKGSNVIEISYtspDPELAAAVANALAEAyleqnlELRRE 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 560 EAQKSLSTVEDLKAEIvsasesRKELELKhEAEVTNYKIK--LEMLEKEKNAVLDRMAESqEAELERLRTQLLfSHEEEL 637
Cdd:COG3206 172 EARKALEFLEEQLPEL------RKELEEA-EAALEEFRQKngLVDLSEEAKLLLQQLSEL-ESQLAEARAELA-EAEARL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 638 SKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQL-ILEISKLKDLQQSLVNSKSEE 716
Cdd:COG3206 243 AALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIaALRAQLQQEAQRILASLEAEL 322
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 717 MTL--QINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMkekeNDLQEKFTQLEAE 776
Cdd:COG3206 323 EALqaREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELY----ESLLQRLEEARLA 380
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
239-598 |
1.43e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 239 QIQFQQLQASETLRNSTHSSTAADLLQAKQQI---RTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDK- 314
Cdd:COG3206 58 TLLVEPQSSDVLLSGLSSLSASDSPLETQIEIlksRPVLERVVDKLNLDEDPLGEEASREAAIERLRKNLTVEPVKGSNv 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 315 ---KVENSNKEEIQEketIIEELNTKIIEE--EKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKleltnSKQKERQ 389
Cdd:COG3206 138 ieiSYTSPDPELAAA---VANALAEAYLEQnlELRREEARKALEFLEEQLPELRKELEEAEAALEEFR-----QKNGLVD 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 390 SSEEIKQLMGTVEELQkrnhkdSQFETdiVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELIRQHVSQMEELKTRHKG 469
Cdd:COG3206 210 LSEEAKLLLQQLSELE------SQLAE--ARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAE 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 470 EMENALRSYPNITVNEDQIklmnvainelniklqdtNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQ 549
Cdd:COG3206 282 LSARYTPNHPDVIALRAQI-----------------AALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLA 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1622925510 550 TIAEQESKLNEAQKSLSTVEDLKAEIVsasESRKELELKHEAEVTNYKI 598
Cdd:COG3206 345 ELPELEAELRRLEREVEVARELYESLL---QRLEEARLAEALTVGNVRV 390
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
577-792 |
1.65e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 577 SASESRKELElKHEAEVTNYKIKLEMLEKEKNAVLDRMAEsQEAELERLrTQLLFSHEEELSKLKEDLEiEHQINIEKLK 656
Cdd:COG4942 21 AAAEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLAA-LERRIAAL-ARRIRALEQELAALEAELA-ELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 657 dnlgihykQQIDGLQNEMSQKIETMQ----FEKDNLITKQNQLILEISKLKDLQQslVNSKSEEMTLQINELQKEIEILR 732
Cdd:COG4942 97 --------AELEAQKEELAELLRALYrlgrQPPLALLLSPEDFLDAVRRLQYLKY--LAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 733 QE-EKEKGTLEQEVQELQLKIELLEKQMKEKE---NDLQEKFTQLEAENSILKDEKKALEDMLK 792
Cdd:COG4942 167 AElEAERAELEALLAELEEERAALEALKAERQkllARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
233-628 |
1.75e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 47.43 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 233 EQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEME- 311
Cdd:pfam05557 48 DRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELEl 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 312 --QDKKVENSNkEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVvQKNQEIKNMKLELTNSKQKER- 388
Cdd:pfam05557 128 qsTNSELEELQ-ERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQE-QDSEIVKNSKSELARIPELEKe 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 389 --QSSEEIKQLMGTVE--ELQKRNHKDSQFETDIVQRMEQET---QRKLEQLRAEL------DEMYGQQIVqmKQELIRQ 455
Cdd:pfam05557 206 leRLREHNKHLNENIEnkLLLKEEVEDLKRKLEREEKYREEAatlELEKEKLEQELqswvklAQDTGLNLR--SPEDLSR 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 456 HVSQMEELKTRHKGE---MENALRSYP-NITVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLE 531
Cdd:pfam05557 284 RIEQLQQREIVLKEEnssLTSSARQLEkARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILE 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 532 DLFEELSFSR-------------EQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEA-----EV 593
Cdd:pfam05557 364 SYDKELTMSNyspqllerieeaeDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPsyskeEV 443
|
410 420 430
....*....|....*....|....*....|....*
gi 1622925510 594 TNYKIKLEMLEKEkNAVLDRMAESQEAELERLRTQ 628
Cdd:pfam05557 444 DSLRRKLETLELE-RQRLREQKNELEMELERRCLQ 477
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
494-738 |
1.77e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 494 AINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKA 573
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 574 EIvsasesRKEL-ELKHEAEVTNYKIKLEMLEKEKNA--------VLDRMAESQEAELERLRTQLlfsheEELSKLKEDL 644
Cdd:COG4942 101 AQ------KEELaELLRALYRLGRQPPLALLLSPEDFldavrrlqYLKYLAPARREQAEELRADL-----AELAALRAEL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 645 EIEhqinieklkdnlgihyKQQIDGLQNEMSQKIETMQfekdNLITKQNQLILEISKLKDLQQslvnSKSEEMTLQINEL 724
Cdd:COG4942 170 EAE----------------RAELEALLAELEEERAALE----ALKAERQKLLARLEKELAELA----AELAELQQEAEEL 225
|
250
....*....|....
gi 1622925510 725 QKEIEILRQEEKEK 738
Cdd:COG4942 226 EALIARLEAEAAAA 239
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
2191-2368 |
1.80e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.07 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2191 VQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAI--K 2268
Cdd:COG1579 10 LDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2269 ESDAVSTQdqhvlfgkfaqiIQEKEVEIDQLNEQIMKLQQQlkittdnkvIEEKNELIRDLETQIECLMSDQECVKRNRE 2348
Cdd:COG1579 90 EYEALQKE------------IESLKRRISDLEDEILELMER---------IEELEEELAELEAELAELEAELEEKKAELD 148
|
170 180
....*....|....*....|
gi 1622925510 2349 EEIEQLNEVIEKLQQELANI 2368
Cdd:COG1579 149 EELAELEAELEELEAEREEL 168
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
307-986 |
2.06e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 47.73 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 307 VYEMEQDKKVENSNKEEIQEKETIIEELNTKiieeEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKnmklELTNSKQK 386
Cdd:TIGR00606 185 IKALETLRQVRQTQGQKVQEHQMELKYLKQY----KEKACEIRDQITSKEAQLESSREIVKSYENELD----PLKNRLKE 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 387 ERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRaELDEMYGQQIVQMKQELIRQH-----VSQME 461
Cdd:TIGR00606 257 IEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLN-DLYHNHQRTVREKERELVDCQrelekLNKER 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 462 ELKTRHKGEMENalrsypnitvnEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGViLEEKCALQRQLEDLFEELSFSR 541
Cdd:TIGR00606 336 RLLNQEKTELLV-----------EQGRLQLQADRHQEHIRARDSLIQSLATRLELDG-FERGPFSERQIKNFHTLVIERQ 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 542 EQIQR-ARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEA 620
Cdd:TIGR00606 404 EDEAKtAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKA 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 621 ELERLRTQLLFSHE----EELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDglQNEMSQKIETMQFEK----------- 685
Cdd:TIGR00606 484 ERELSKAEKNSLTEtlkkEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRT--QMEMLTKDKMDKDEQirkiksrhsde 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 686 ---------------DNLITKQNQLILEISKLKDLQQSLvnSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQL 750
Cdd:TIGR00606 562 ltsllgyfpnkkqleDWLHSKSKEINQTRDRLAKLNKEL--ASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEES 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 751 KIELLEKQMKEKENDL----------QEKFTQLEAENSI--------------LKDEKKALEDMLKIhTPDNQEERLIFI 806
Cdd:TIGR00606 640 DLERLKEEIEKSSKQRamlagatavySQFITQLTDENQSccpvcqrvfqteaeLQEFISDLQSKLRL-APDKLKSTESEL 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 807 DSIKSKS-----KDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKV------K 875
Cdd:TIGR00606 719 KKKEKRRdemlgLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVtimerfQ 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 876 DDLEDSKNKQElEYKSKLKALNEELHLQRINpTTVKTKSSVFDEDKTFVAETLEMGEVVEKDTTELMEKLEVTKREKLEL 955
Cdd:TIGR00606 799 MELKDVERKIA-QQAAKLQGSDLDRTVQQVN-QEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQI 876
|
730 740 750
....*....|....*....|....*....|....
gi 1622925510 956 S---QRLADLSEQLKQKHGEISFLNEEVKSLKQE 986
Cdd:TIGR00606 877 GtnlQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
2134-2255 |
2.09e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.08 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2134 KEQLQRDIQERNEEIEKLEFRVRELEQALlvsadtfqkvedRKQFGAVEAKpelslEVQLQAERDAIDRKEKEITNLEEQ 2213
Cdd:PRK12704 70 RNEFEKELRERRNELQKLEKRLLQKEENL------------DRKLELLEKR-----EEELEKKEKELEQKQQELEKKEEE 132
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 2214 LEQFREELENKNEEVQQL------HMQLEIQKKESTT----RLQELEQENKL 2255
Cdd:PRK12704 133 LEELIEEQLQELERISGLtaeeakEILLEKVEEEARHeaavLIKEIEEEAKE 184
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
471-1002 |
2.10e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.59 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 471 MENALRSYpnitvnEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDL---FEELSFSREQIQRA 547
Cdd:PRK01156 188 LEEKLKSS------NLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELsslEDMKNRYESEIKTA 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 548 RQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERLRT 627
Cdd:PRK01156 262 ESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDY 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 628 QLLFSHEEELSKLKEDLEIEHQ------INIEKLKDNLGiHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEI-- 699
Cdd:PRK01156 342 IKKKSRYDDLNNQILELEGYEMdynsylKSIESLKKKIE-EYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLqd 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 700 --SKLKDLQQSLVNSKSEEMtlqinELQKEIEILRQEEKEK---GTLEQEvqelqlKIELLEKQMKEKENDLQEKFTQLE 774
Cdd:PRK01156 421 isSKVSSLNQRIRALRENLD-----ELSRNMEMLNGQSVCPvcgTTLGEE------KSNHIINHYNEKKSRLEEKIREIE 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 775 AENSILKDEKKALEDMLKIHTPDNQEERLIFIDSIKSK----SKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNT- 849
Cdd:PRK01156 490 IEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESAradlEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTs 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 850 -FSFAEKNFEVNYQELQEEYACLLKVKDDLEDSKNKQELEY-------KSKLKALNEELHLQRINPTTVKTKSSVFDEdk 921
Cdd:PRK01156 570 wLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFpddksyiDKSIREIENEANNLNNKYNEIQENKILIEK-- 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 922 tfvaetleMGEVVEKDTTELMEKLEVTKREKlELSQRLADLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIII 1001
Cdd:PRK01156 648 --------LRGKIDNYKKQIAEIDSIIPDLK-EITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRI 718
|
.
gi 1622925510 1002 N 1002
Cdd:PRK01156 719 N 719
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
521-783 |
2.32e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 47.60 E-value: 2.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 521 EEKCALQRQLE---DLFEELSFSREQIQRARQTIAEQESKLNEAQKSLstvEDLKAEIVSASESRKElelkheaevtnyK 597
Cdd:PRK11281 56 AEDKLVQQDLEqtlALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAEL---EALKDDNDEETRETLS------------T 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 598 IKLEMLEKEKNAVLDRMAESQEA------ELERLRTQLlfshEEELSKLKEDLEIEHQINIeKLKDNlgihykqQIDGLQ 671
Cdd:PRK11281 121 LSLRQLESRLAQTLDQLQNAQNDlaeynsQLVSLQTQP----ERAQAALYANSQRLQQIRN-LLKGG-------KVGGKA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 672 NEMSQKIEtMQFEKD--NLITKQNQLILEISklkDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKgtleqevqelq 749
Cdd:PRK11281 189 LRPSQRVL-LQAEQAllNAQNDLQRKSLEGN---TQLQDLLQKQRDYLTARIQRLEHQLQLLQEAINSK----------- 253
|
250 260 270
....*....|....*....|....*....|....
gi 1622925510 750 lKIELLEKQMKEKENdlQEKfTQLEAENSILKDE 783
Cdd:PRK11281 254 -RLTLSEKTVQEAQS--QDE-AARIQANPLVAQE 283
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
2210-2445 |
2.46e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2210 LEEQLEQFREELENK----NEEVQQLHMQLEiqkkESTTRLQELEQENKLFkDDMEKLGLAIKESDAVSTQdqhvlfgkf 2285
Cdd:COG3206 162 LEQNLELRREEARKAleflEEQLPELRKELE----EAEAALEEFRQKNGLV-DLSEEAKLLLQQLSELESQ--------- 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2286 aqiIQEKEVEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSD-QECVKRNREE--EIEQLNEVIEKLQ 2362
Cdd:COG3206 228 ---LAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAElAELSARYTPNhpDVIALRAQIAALR 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2363 QELANIGQKTLVDAHSlpeEADSLKHQLDMVIAEKLALEQQVETtneemtftknilketnfkMNQLTQELFSLKRERESM 2442
Cdd:COG3206 305 AQLQQEAQRILASLEA---ELEALQAREASLQAQLAQLEARLAE------------------LPELEAELRRLEREVEVA 363
|
...
gi 1622925510 2443 EKI 2445
Cdd:COG3206 364 REL 366
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
161-640 |
2.48e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 161 ESELAGKQHEIEELNRELEEMRvtygteglQQLQEFEAAIKQRDGI-ITQLTANLQQARREKDETMREFLELTEQSQKLQ 239
Cdd:COG4913 301 RAELARLEAELERLEARLDALR--------EELDELEAQIRGNGGDrLEQLEREIERLERELEERERRRARLEALLAALG 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 240 IQFqqlqasetlrnsthSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQ----KKKEDFTMQISFLQEKIKVYEmeqdKK 315
Cdd:COG4913 373 LPL--------------PASAEEFAALRAEAAALLEALEEELEALEEALaeaeAALRDLRRELRELEAEIASLE----RR 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 316 VENSNKEEIQEKETIIEELNtkIIEEEKK----TLELKDK----LTAADKLLGEL-------QEQVVQKNQEIKNMKLEL 380
Cdd:COG4913 435 KSNIPARLLALRDALAEALG--LDEAELPfvgeLIEVRPEeerwRGAIERVLGGFaltllvpPEHYAAALRWVNRLHLRG 512
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 381 --------TNSKQKERQSSEE-----------------IKQLMG---------TVEELQK----------RNHKDSQFET 416
Cdd:COG4913 513 rlvyervrTGLPDPERPRLDPdslagkldfkphpfrawLEAELGrrfdyvcvdSPEELRRhpraitragqVKGNGTRHEK 592
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 417 DIVQRMEQE------TQRKLEQLRAELDEMygqqivqmkQELIRQHVSQMEELKTRHKgEMENALRSYPNIT-VNEDQIK 489
Cdd:COG4913 593 DDRRRIRSRyvlgfdNRAKLAALEAELAEL---------EEELAEAEERLEALEAELD-ALQERREALQRLAeYSWDEID 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 490 LMnvainELNIKLQDTNSQKEKLKEELGVILEekcaLQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVE 569
Cdd:COG4913 663 VA-----SAEREIAELEAELERLDASSDDLAA----LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQ 733
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 570 DLKAEIVSASESRKELELKheaevtnykiklEMLEKEKN-AVLDRMAESQEAELERLRTQlLFSHEEELSKL 640
Cdd:COG4913 734 DRLEAAEDLARLELRALLE------------ERFAAALGdAVERELRENLEERIDALRAR-LNRAEEELERA 792
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
525-776 |
2.73e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 525 ALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLstvEDLKAEIVSASESRKELElkheAEVTNYKIKLEMLE 604
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQL---AALERRIAALARRIRALE----QELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 605 KEKNAVLDRMAESQEAELERLRTQLLFSHEEELSKLKedleieHQINIEKLKDNLgihykQQIDGLQNEMSQKIETMQFE 684
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLGRQPPLALLL------SPEDFLDAVRRL-----QYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 685 KDNLITKQNQLILEISKLKDLQQslvnskseemtlqinELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKEN 764
Cdd:COG4942 159 LAELAALRAELEAERAELEALLA---------------ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
250
....*....|..
gi 1622925510 765 DLQEKFTQLEAE 776
Cdd:COG4942 224 ELEALIARLEAE 235
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
209-843 |
3.03e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.99 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 209 QLTANLQQARREKDETMREFLELTEQSQKlqiQFQQLQASETLRNSthsstAADLLQAKQQIRTHQQQLEEQDHL-LEDY 287
Cdd:COG5022 831 KLRETEEVEFSLKAEVLIQKFGRSLKAKK---RFSLLKKETIYLQS-----AQRVELAERQLQELKIDVKSISSLkLVNL 902
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 288 QKKKE--DFTMQIS---FLQEKIKVYEMEQDKKV-ENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGE 361
Cdd:COG5022 903 ELESEiiELKKSLSsdlIENLEFKTELIARLKKLlNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTI 982
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 362 LQEQVVQKNQEIKNMKLELTN-SKQKER--QSSEEIKQLMGTVEELQKRNHKDSQfETDIVQRMeqetqRKLEQLRAELD 438
Cdd:COG5022 983 LVREGNKANSELKNFKKELAElSKQYGAlqESTKQLKELPVEVAELQSASKIISS-ESTELSIL-----KPLQKLKGLLL 1056
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 439 EMYGQQIVQMKQELIRQHVSQMEELKTRHKGEMENALRS--YPNITVNEDQikLMNVAINELNIKLQDTNSQKEKLKEEL 516
Cdd:COG5022 1057 LENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTinVKDLEVTNRN--LVKPANVLQFIVAQMIKLNLLQEISKF 1134
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 517 GVIL--------EEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQK-----SLSTVEDLKAEIVS-ASESR 582
Cdd:COG5022 1135 LSQLvntlepvfQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDeksklSSSEVNDLKNELIAlFSKIF 1214
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 583 KELELKHE-----AEVTNYKIKLEMLeKEKNAVLDRMAESQEAELERLRTQLLfSHEEELSKLKEDLEIEHQInieklkd 657
Cdd:COG5022 1215 SGWPRGDKlkkliSEGWVPTEYSTSL-KGFNNLNKKFDTPASMSNEKLLSLLN-SIDNLLSSYKLEEEVLPAT------- 1285
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 658 nlgihykqqidglQNEMSQKIETMQFekDNLITKQNQLILEISKLKDLQQSLVNSKSEEMtlQINELQKEIEILRQEEKE 737
Cdd:COG5022 1286 -------------INSLLQYINVGLF--NALRTKASSLRWKSATEVNYNSEELDDWCREF--EISDVDEELEELIQAVKV 1348
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 738 KGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDM-----LKIHTPDNQEERLIFIDSIKSK 812
Cdd:COG5022 1349 LQLLKDDLNKLDELLDACYSLNPAEIQNLKSRYDPADKENNLPKEILKKIEALlikqeLQLSLEGKDETEVHLSEIFSEE 1428
|
650 660 670
....*....|....*....|....*....|....*
gi 1622925510 813 ----SKDSVWEKEIEILTEENEDLKQQCIQLNEEI 843
Cdd:COG5022 1429 ksliSLDRNSIYKEEVLSSLSALLTKEKIALLDRK 1463
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
199-381 |
3.18e-04 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 46.77 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 199 AIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQL-QASETLRNSTHSstaadLLQAKQQIRTHQQQL 277
Cdd:pfam09726 396 ALVRLEQDIKKLKAELQASRQTEQELRSQISSLTSLERSLKSELGQLrQENDLLQTKLHN-----AVSAKQKDKQTVQQL 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 278 E-----EQDH-------LLEDYQKKKE----------------------------DFTMQISFLQEKIKVYEmEQDKKVE 317
Cdd:pfam09726 471 EkrlkaEQEArasaekqLAEEKKRKKEeeataaravalaaasrgecteslkqrkrELESEIKKLTHDIKLKE-EQIRELE 549
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 318 NSNKE--EIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKL-------LGE-------LQEQVVQKNQEIKNMKLELT 381
Cdd:pfam09726 550 IKVQElrKYKESEKDTEVLMSALSAMQDKNQHLENSLSAETRIkldlfsaLGDakrqleiAQGQIYQKDQEIKDLKQKIA 629
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
482-645 |
3.31e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.30 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 482 TVNEDQIKLMNVAinELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEA 561
Cdd:COG1579 1 AMPEDLRALLDLQ--ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 562 QKSLSTV------EDLKAEIVSASESRKELElKHEAEVTNykiKLEMLEKEKNAVLDRMAEsQEAELERLRTQLlfshEE 635
Cdd:COG1579 79 EEQLGNVrnnkeyEALQKEIESLKRRISDLE-DEILELME---RIEELEEELAELEAELAE-LEAELEEKKAEL----DE 149
|
170
....*....|
gi 1622925510 636 ELSKLKEDLE 645
Cdd:COG1579 150 ELAELEAELE 159
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
309-770 |
3.86e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 3.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 309 EMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLG--ELQEQVVQKNQEIKNMKLELTNSKQK 386
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 387 ErqssEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEmygqqiVQMKQELIRQHVSQMEELKTR 466
Cdd:COG4717 155 L----EELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEE------LQQRLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 467 HKGEMENALRSYPNITVNE--DQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQI 544
Cdd:COG4717 225 LEEELEQLENELEAAALEErlKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 545 QRARQTIAE---QESKLNEAQKSLSTVEDLKAEIVSASESRKE--LELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQE 619
Cdd:COG4717 305 EELQALPALeelEEEELEELLAALGLPPDLSPEELLELLDRIEelQELLREAEELEEELQLEELEQEIAALLAEAGVEDE 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 620 AELERLRTQLlfsheEELSKLKEDL-EIEHQIN--IEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLI 696
Cdd:COG4717 385 EELRAALEQA-----EEYQELKEELeELEEQLEelLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELE 459
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 697 LEISKLKDLQqslvnskseemtlQINELQKEIEILRQEEKEkgtLEQEVQELQLKIELLEKQMKEKENDLQEKF 770
Cdd:COG4717 460 AELEQLEEDG-------------ELAELLQELEELKAELRE---LAEEWAALKLALELLEEAREEYREERLPPV 517
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1569-2034 |
3.93e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.47 E-value: 3.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1569 DEISVSSMDASRQLMLNEEQLED---MRQELVRQYQEHQQATELLRQAHMRQMERQREDQEQLQEEIKRLNKQLAQRSSI 1645
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEaeeALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1646 DNENLvsERERVLLEELEALKQLSLAGREKLCCELRNSSTQTQNGNENQGEAEEQTFKEKELDRKpehvppeilsneRYA 1725
Cdd:COG1196 420 EEELE--ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL------------LEE 485
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1726 LQKANNRLLkILLEVVKTTAAVEETIGRHVLGILDRSSKSQSSASLIWRSEAEAsvkscvheehtrVTDESIPSYSGSDM 1805
Cdd:COG1196 486 LAEAAARLL-LLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEA------------ALEAALAAALQNIV 552
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1806 PRNDinmwskvtEEGTELSQRLVRSGFAGTEIDPENEELVLNISSRLQAAVEKLLEAISETSSQLEHAKVTQTELMRESF 1885
Cdd:COG1196 553 VEDD--------EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLG 624
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1886 RQKQEATES--LKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQELLCASNRLQE 1963
Cdd:COG1196 625 RTLVAARLEaaLRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEE 704
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 1964 LEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQA---EKVRDDLQKQVKALEIDVEE 2034
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEElpePPDLEELERELERLEREIEA 778
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1986-2371 |
4.29e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.57 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1986 KAEAGPVEQ-----QLLQETEKLMKEKLEVQCQAEKVRDDL----------QKQVKALEIDVEEQVSRFIELEQEKNAEL 2050
Cdd:PRK02224 199 KEEKDLHERlngleSELAELDEEIERYEEQREQARETRDEAdevleeheerREELETLEAEIEDLRETIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2051 MDLRQQNQALEKQLEKMRKFLDEQAIDR------EHERDVFQQEIQKLEQQLK----VVPRFQPISEHQTREVEQLTNHL 2120
Cdd:PRK02224 279 EEVRDLRERLEELEEERDDLLAEAGLDDadaeavEARREELEDRDEELRDRLEecrvAAQAHNEEAESLREDADDLEERA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2121 KEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQfgaveakpelslevQLQAERDAI 2200
Cdd:PRK02224 359 EELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE--------------ELREERDEL 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2201 DRKEKEIT----NLEEQLEQFR---------------------EELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKL 2255
Cdd:PRK02224 425 REREAELEatlrTARERVEEAEalleagkcpecgqpvegsphvETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDL 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2256 FKDDMEKLGLAIKESDAVSTQDQHvlfgkfAQIIQEKEVEIDQLNEQIMKL-----QQQLKITTDNKVIEEKNELIRDLE 2330
Cdd:PRK02224 505 VEAEDRIERLEERREDLEELIAER------RETIEEKRERAEELRERAAELeaeaeEKREAAAEAEEEAEEAREEVAELN 578
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1622925510 2331 TQIECLMSDQECVKRNRE--EEIEQLNEVIEKLQQELANIGQK 2371
Cdd:PRK02224 579 SKLAELKERIESLERIRTllAAIADAEDEIERLREKREALAEL 621
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1978-2308 |
4.55e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 4.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1978 LSRQKEAMKAEAGPVEQQLLQETEKL--MKEKLEVQCQAEKVRDDLQKqvkaLEIDVEEQVsrfiELEQEKNAELMDLRQ 2055
Cdd:PRK04863 312 MARELAELNEAESDLEQDYQAASDHLnlVQTALRQQEKIERYQADLEE----LEERLEEQN----EVVEEADEQQEENEA 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2056 QNQALEKQLEKMRKFLD--EQAIDREHERDV-FQQEIQKLE--QQLKVVPRFQPisEHQTREVEQLTNHLKEKTDKcsel 2130
Cdd:PRK04863 384 RAEAAEEEVDELKSQLAdyQQALDVQQTRAIqYQQAVQALEraKQLCGLPDLTA--DNAEDWLEEFQAKEQEATEE---- 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2131 LLSKEQLQRDIQERNEEIEKLEFRVREL------EQALLVSADTF-QKVEDRKQFGAVEA-KPELS-LEVQLQAERDAID 2201
Cdd:PRK04863 458 LLSLEQKLSVAQAAHSQFEQAYQLVRKIagevsrSEAWDVARELLrRLREQRHLAEQLQQlRMRLSeLEQRLRQQQRAER 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2202 R-------------KEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQ---ENKLFKDDMEKL-- 2263
Cdd:PRK04863 538 LlaefckrlgknldDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAArapAWLAAQDALARLre 617
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1622925510 2264 --GLAIKESDAVSTQDQHVLFGKFAQIIQEKEVE--IDQLNEQIMKLQQ 2308
Cdd:PRK04863 618 qsGEEFEDSQDVTEYMQQLLERERELTVERDELAarKQALDEEIERLSQ 666
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
2190-2366 |
4.60e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 4.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2190 EVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGlaike 2269
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELG----- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2270 SDAVSTQDQHVLFGKFAQIIQEKEVE--IDQLN--EQIMKLQQQL--KITTDNKVIEEKNELIRDLETQIECLMSDQECV 2343
Cdd:COG3883 90 ERARALYRSGGSVSYLDVLLGSESFSdfLDRLSalSKIADADADLleELKADKAELEAKKAELEAKLAELEALKAELEAA 169
|
170 180
....*....|....*....|...
gi 1622925510 2344 KRNREEEIEQLNEVIEKLQQELA 2366
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEA 192
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
2034-2245 |
4.94e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 4.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2034 EQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKfldeqaidrehERDVFQQEIQKLEQQLKVVPRFQpisehqtrEV 2113
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEA-----------ELEELREELEKLEKLLQLLPLYQ--------EL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2114 EQLTNHLKEKTDKcselllsKEQLQRDIQERNEEIEKLEFRVRELEQAllvsadtfqkvedRKQFGAVEAKPELSLEVQL 2193
Cdd:COG4717 135 EALEAELAELPER-------LEELEERLEELRELEEELEELEAELAEL-------------QEELEELLEQLSLATEEEL 194
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 2194 QAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTR 2245
Cdd:COG4717 195 QDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK 246
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
147-475 |
4.99e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.50 E-value: 4.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 147 EQGAQYSLTHLEMMESELAgkQHEIEELNRELEEMRVTYGTEGLQQLQEFEAAIKQRDGIITQLTanlqqarrEKDETMR 226
Cdd:TIGR00618 638 SQELALKLTALHALQLTLT--QERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLA--------QCQTLLR 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 227 EFLELTEQSQKlqiQFQQLQASETLRNSThsstaadllqAKQQIRTHQQQLEEQDHLlEDYQKKKEDFTMQISFLQEKIK 306
Cdd:TIGR00618 708 ELETHIEEYDR---EFNEIENASSSLGSD----------LAAREDALNQSLKELMHQ-ARTVLKARTEAHFNNNEEVTAA 773
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 307 VYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQ-------EIKNMKLE 379
Cdd:TIGR00618 774 LQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEeksatlgEITHQLLK 853
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 380 LTNSKQKERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAeldemygqqivqmKQELIRQHVSQ 459
Cdd:TIGR00618 854 YEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALIKFLHEITLYANVRLA-------------NQSEGRFHGRY 920
|
330
....*....|....*.
gi 1622925510 460 MEELKTRHKGEMENAL 475
Cdd:TIGR00618 921 ADSHVNARKYQGLALL 936
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
260-561 |
5.17e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 5.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 260 AADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEqdkkvensnkEEIQEKEtiieelntkii 339
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAE----------REIAELE----------- 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 340 eeekktlELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQkrnhkdsqfetdiv 419
Cdd:COG4913 675 -------AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQ-------------- 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 420 QRMEQETQRKLEQLRAELDEMYGQ----QIVQMKQELIRQHVSQMEELKTRHKGEMENALRSY----PNITVNEDqIKLM 491
Cdd:COG4913 734 DRLEAAEDLARLELRALLEERFAAalgdAVERELRENLEERIDALRARLNRAEEELERAMRAFnrewPAETADLD-ADLE 812
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 492 NVA--INELNiKLQDTN--SQKEKLKEelgvileekcALQRQLEDLFEELSFsreQIQRARQTIAEQESKLNEA 561
Cdd:COG4913 813 SLPeyLALLD-RLEEDGlpEYEERFKE----------LLNENSIEFVADLLS---KLRRAIREIKERIDPLNDS 872
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
677-783 |
5.19e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 46.23 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 677 KIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLE 756
Cdd:COG0542 405 EIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEEIQELKEELEQRY 484
|
90 100
....*....|....*....|....*..
gi 1622925510 757 KQMKEKENDLQEKFTQLEAENSILKDE 783
Cdd:COG0542 485 GKIPELEKELAELEEELAELAPLLREE 511
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1993-2444 |
5.20e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 5.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1993 EQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEiDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLD 2072
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAE-EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2073 EQAIDRE-----HERDVFQQEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTDKCS--------ELLLSKEQLQR 2139
Cdd:COG4717 127 LLPLYQElealeAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSlateeelqDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2140 DIQERNEEIEKLEFRVRELEQAL------LVSADTFQKVEDRKQFGAVEAkPELSLEVQLQAERDAIDRKEKEITNLEEQ 2213
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELeqleneLEAAALEERLKEARLLLLIAA-ALLALLGLGGSLLSLILTIAGVLFLVLGL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2214 LEQFREELENKNEEVQQlhmqlEIQKKESTTRLQELEQENklFKDDMEKLGLAIKESDAvstqdqhvlfgkFAQIIQEKE 2293
Cdd:COG4717 286 LALLFLLLAREKASLGK-----EAEELQALPALEELEEEE--LEELLAALGLPPDLSPE------------ELLELLDRI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2294 VEIDQLNEQIMKLQQQLKIttdnkvieekneliRDLETQIECLMSDQECvkrnreEEIEQLNEVIEKLQQELANIGQKTL 2373
Cdd:COG4717 347 EELQELLREAEELEEELQL--------------EELEQEIAALLAEAGV------EDEEELRAALEQAEEYQELKEELEE 406
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 2374 VDaHSLPEEADSLKHQLDMVIAEklALEQQVETTNEEmtftkniLKETNFKMNQLTQELFSLKRERESMEK 2444
Cdd:COG4717 407 LE-EQLEELLGELEELLEALDEE--ELEEELEELEEE-------LEELEEELEELREELAELEAELEQLEE 467
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
555-738 |
5.21e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 555 ESKLNEAQKSL-STVEDLKAEivsASESRKELELKHEAEVTNYKIKLEMLEKEKNavldrmaesqeAELERLRTQLLfSH 633
Cdd:PRK12704 30 EAKIKEAEEEAkRILEEAKKE---AEAIKKEALLEAKEEIHKLRNEFEKELRERR-----------NELQKLEKRLL-QK 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 634 EEELSKLKEDLEIEHQInIEKLKDNLgihykqqidglqNEMSQKIETMQFEKDNLITKQNQLILEISKL--KDLQQSLVN 711
Cdd:PRK12704 95 EENLDRKLELLEKREEE-LEKKEKEL------------EQKQQELEKKEEELEELIEEQLQELERISGLtaEEAKEILLE 161
|
170 180
....*....|....*....|....*..
gi 1622925510 712 SKSEEMTLQINELQKEIEILRQEEKEK 738
Cdd:PRK12704 162 KVEEEARHEAAVLIKEIEEEAKEEADK 188
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1850-2151 |
5.53e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.21 E-value: 5.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1850 SRLQAAVEKLLEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEgvIDGY 1929
Cdd:TIGR02169 719 GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR--IPEI 796
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1930 ADEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLE 2009
Cdd:TIGR02169 797 QAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAA 876
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2010 VQcQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHER-----DV 2084
Cdd:TIGR02169 877 LR-DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEeelslED 955
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 2085 FQQEIQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTDKcsellLSKEqlQRDIQERNEEIEKL 2151
Cdd:TIGR02169 956 VQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAK-----LEEE--RKAILERIEEYEKK 1015
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
197-594 |
5.78e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 45.66 E-value: 5.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 197 EAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQasETLRNSTHSSTAADLlQAKQQIRTHQQQ 276
Cdd:pfam07888 37 EECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELK--EELRQSREKHEELEE-KYKELSASSEEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 277 LEEQDHLL---EDYQKKKEDFTMQISFLQEKIKVYEMEQDKKVENSNKEEIQ--EKETIIEELNTKIIEEEKKTLELKDK 351
Cdd:pfam07888 114 SEEKDALLaqrAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQrkEEEAERKQLQAKLQQTEEELRSLSKE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 352 LTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNHKDSQFETDIVQRMEQE--TQRK 429
Cdd:pfam07888 194 FQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRdrTQAE 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 430 LEQLRAELDEMYGQqivqmkqelIRQHVSQMEELKTRHKGEMENALRsypNITVNEDQIKLMNVAINELNIKLQDTNSQK 509
Cdd:pfam07888 274 LHQARLQAAQLTLQ---------LADASLALREGRARWAQERETLQQ---SAEADKDRIEKLSAELQRLEERLQEERMER 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 510 EKLKEELGvileekcalqrqledlfEELSFSREQIQRARQTIAEQESKLNEAQKSlstVEDLKAEIVSASESRKELELKH 589
Cdd:pfam07888 342 EKLEVELG-----------------REKDCNRVQLSESRRELQELKASLRVAQKE---KEQLQAEKQELLEYIRQLEQRL 401
|
....*
gi 1622925510 590 EAEVT 594
Cdd:pfam07888 402 ETVAD 406
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
2013-2252 |
6.09e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2013 QAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNaeLMDLRQQNQALEKQLEKmrkfLDEQAIDREHERDVFQQEIQKL 2092
Cdd:COG3206 172 EARKALEFLEEQLPELRKELEEAEAALEEFRQKNG--LVDLSEEAKLLLQQLSE----LESQLAEARAELAEAEARLAAL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2093 EQQLKVVPRFQPiSEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSadtfqkv 2172
Cdd:COG3206 246 RAQLGSGPDALP-ELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILAS------- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2173 edrkqfgaveakpelslevqLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTT---RLQEL 2249
Cdd:COG3206 318 --------------------LEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESllqRLEEA 377
|
...
gi 1622925510 2250 EQE 2252
Cdd:COG3206 378 RLA 380
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1997-2448 |
6.73e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.81 E-value: 6.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1997 LQETEKLMKEKlevqcqaEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAI 2076
Cdd:TIGR00606 711 LKSTESELKKK-------EKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEES 783
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2077 DREHERDVfqQEIQKLEQQLKVVPR--FQPISEHQT----REVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEK 2150
Cdd:TIGR00606 784 AKVCLTDV--TIMERFQMELKDVERkiAQQAAKLQGsdldRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQH 861
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2151 LEFRVRELEQALLVSADTFQKvedRKQFGavEAKPELSLEVQlqaerdAIDRKEKEITNLEEQLEQFREELENKNEEvqq 2230
Cdd:TIGR00606 862 LKSKTNELKSEKLQIGTNLQR---RQQFE--EQLVELSTEVQ------SLIREIKDAKEQDSPLETFLEKDQQEKEE--- 927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2231 LHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQL 2310
Cdd:TIGR00606 928 LISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDI 1007
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2311 KITTDNKVIEEKNELIRDLETQIECLMSD-QECVKRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKH- 2388
Cdd:TIGR00606 1008 DTQKIQERWLQDNLTLRKRENELKEVEEElKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHf 1087
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2389 QLDMVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQELfsLKRERESMEKIQSI 2448
Cdd:TIGR00606 1088 KKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAI--MKFHSMKMEEINKI 1145
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
505-803 |
7.30e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 45.62 E-value: 7.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 505 TNSQKEKLKEELGVILEE---KCALQRQLEDLFEELSFSREQIQRARQTIAEQESKL-NEAQKSLSTV---EDLKAEI-- 575
Cdd:PLN03229 460 LNEMIEKLKKEIDLEYTEaviAMGLQERLENLREEFSKANSQDQLMHPVLMEKIEKLkDEFNKRLSRApnyLSLKYKLdm 539
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 576 -VSASESRKELELKHEAEV----TNYKIKLEMLE---KEKNAVLDRMAESQEA------------ELERLRTQLLFSHEE 635
Cdd:PLN03229 540 lNEFSRAKALSEKKSKAEKlkaeINKKFKEVMDRpeiKEKMEALKAEVASSGAssgdeldddlkeKVEKMKKEIELELAG 619
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 636 ELSKLKEDLEIEHQINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDnLITKQNQLILEISKlkdlqqslvNSKSE 715
Cdd:PLN03229 620 VLKSMGLEVIGVTKKNKDTAEQTPPPNLQEKIESLNEEINKKIERVIRSSD-LKSKIELLKLEVAK---------ASKTP 689
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 716 EMTLQinelqKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDlqekftqLEAENSILKdekkalEDMLKIHT 795
Cdd:PLN03229 690 DVTEK-----EKIEALEQQIKQKIAEALNSSELKEKFEELEAELAAARET-------AAESNGSLK------NDDDKEED 751
|
....*...
gi 1622925510 796 PDNQEERL 803
Cdd:PLN03229 752 SKEDGSRV 759
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
3085-3364 |
8.07e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 8.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3085 QKADRRSLLSEIQALHAQMNGRKITLKR-EQENEKSSQEL--LEYNIQQKQSQMLEMQVELSSMKDRATELQEQLSSEKM 3161
Cdd:TIGR02169 672 EPAELQRLRERLEGLKRELSSLQSELRRiENRLDELSQELsdASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3162 VVAELRSELAQTKLELETTLKAQHKHLKELEAF-----RLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAKLgHS 3236
Cdd:TIGR02169 752 EIENVKSELKELEARIEELEEDLHKLEEALNDLearlsHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEK-EY 830
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3237 EERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQLSEEHGRNLELQVLLESEKVRIREMSS 3316
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3317 TLDRERELHAQLQSNDGTGQSR------------PSLPSEDLLKELQKQLEEKHSRIVEL 3364
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEElseiedpkgedeEIPEEELSLEDVQAELQRVEEEIRAL 970
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1860-2312 |
8.94e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1860 LEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDgyadektlfeRQ 1939
Cdd:pfam15921 460 LEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVD----------LK 529
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1940 IQEKtdiidrleqellcasnrlqeleaeqqqiqeerellsrqkeamkaeagpveQQLLQETEKLMkeklEVQCQAEKVRD 2019
Cdd:pfam15921 530 LQEL--------------------------------------------------QHLKNEGDHLR----NVQTECEALKL 555
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2020 DLQKQVKALEIdVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDE--------QAIDREHERDVFQQEIQK 2091
Cdd:pfam15921 556 QMAEKDKVIEI-LRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEfkilkdkkDAKIRELEARVSDLELEK 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2092 LEQQLKVVPRFQPISEHQtREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIE----KLEFRVRELEQALLVSAD 2167
Cdd:pfam15921 635 VKLVNAGSERLRAVKDIK-QERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMEtttnKLKMQLKSAQSELEQTRN 713
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2168 TFQKVEDRKQFGaveAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQ 2247
Cdd:pfam15921 714 TLKSMEGSDGHA---MKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAG 790
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 2248 ELE----QENKLfKDDMEKLGLAIkesDAVSTQdqhvlFGKFAQIIQEKEVEIDQLneqimKLQQQLKI 2312
Cdd:pfam15921 791 ELEvlrsQERRL-KEKVANMEVAL---DKASLQ-----FAECQDIIQRQEQESVRL-----KLQHTLDV 845
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
157-628 |
9.25e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 9.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 157 LEMMESELAGKQHEIEELNRELEEMRVTYGTEGlQQLQEFEAAIKQRDgiiTQLTANLQQARREKDETMREFLELTEQSQ 236
Cdd:pfam15921 344 IEELEKQLVLANSELTEARTERDQFSQESGNLD-DQLQKLLADLHKRE---KELSLEKEQNKRLWDRDTGNSITIDHLRR 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 237 KLQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVyeMEQDKKV 316
Cdd:pfam15921 420 ELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMT--LESSERT 497
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 317 ENSNKEEIQEKETIIEELNTKI----------IEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQK 386
Cdd:pfam15921 498 VSDLTASLQEKERAIEATNAEItklrsrvdlkLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQL 577
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 387 ERQSSEEIKQLMGTVEELQKRNHkDSQFETDIVQRMEQETQRKLEQLRAELDEM---------YGQQIVQMKQELIRQHV 457
Cdd:pfam15921 578 VGQHGRTAGAMQVEKAQLEKEIN-DRRLELQEFKILKDKKDAKIRELEARVSDLelekvklvnAGSERLRAVKDIKQERD 656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 458 SQMEELKTRhKGEMENALRSYPNITVN-EDQIKLMNVAINELNIKLQDTNSQKEKLKEEL-------GVILEEKCALQRQ 529
Cdd:pfam15921 657 QLLNEVKTS-RNELNSLSEDYEVLKRNfRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLksmegsdGHAMKVAMGMQKQ 735
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 530 L-------EDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEM 602
Cdd:pfam15921 736 ItakrgqiDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDK 815
|
490 500
....*....|....*....|....*.
gi 1622925510 603 LEKEKNAVLDrMAESQEAELERLRTQ 628
Cdd:pfam15921 816 ASLQFAECQD-IIQRQEQESVRLKLQ 840
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
227-784 |
9.36e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 9.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 227 EFLELTEQSQKLQIQFQQLQASETLRNSTHSSTA-ADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKI 305
Cdd:pfam05483 222 EKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKmKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDI 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 306 KVyEMEQDKKVENSNKEEIQ-----------EKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIK 374
Cdd:pfam05483 302 KM-SLQRSMSTQKALEEDLQiatkticqlteEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLK 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 375 NMKLELTNSKQKERQSSE-------EIKQLMGTVEELQKRNHKDSQFE--TDIVQRMEQETQRKLEQLRAELDEMYGQQI 445
Cdd:pfam05483 381 IITMELQKKSSELEEMTKfknnkevELEELKKILAEDEKLLDEKKQFEkiAEELKGKEQELIFLLQAREKEIHDLEIQLT 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 446 VQMKQEliRQHVSQMEELKTrhkgEMENALRSYPNITVNEDQIKLMNvaiNELNIKLQDTNSQKEKLKEELGVILEEKCA 525
Cdd:pfam05483 461 AIKTSE--EHYLKEVEDLKT----ELEKEKLKNIELTAHCDKLLLEN---KELTQEASDMTLELKKHQEDIINCKKQEER 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 526 LQRQLEDLFEELSFSREQIQRARQTIAEQESKLN-EAQKSLSTVEDLKAEIVSASESRKELELK---HEAEVTNYKIKLE 601
Cdd:pfam05483 532 MLKQIENLEEKEMNLRDELESVREEFIQKGDEVKcKLDKSEENARSIEYEVLKKEKQMKILENKcnnLKKQIENKNKNIE 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 602 MLEKEKNAVLDR-MAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKDNlgihykqqidglQNEMSQKIET 680
Cdd:pfam05483 612 ELHQENKALKKKgSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKIS------------EEKLLEEVEK 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 681 MQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKE----KGTLEQEVQELQLKIELLE 756
Cdd:pfam05483 680 AKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEqssaKAALEIELSNIKAELLSLK 759
|
570 580
....*....|....*....|....*....
gi 1622925510 757 KQMkEKENDLQEKFTQLEAENS-ILKDEK 784
Cdd:pfam05483 760 KQL-EIEKEEKEKLKMEAKENTaILKDKK 787
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
612-796 |
9.41e-04 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 45.44 E-value: 9.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 612 DRMAESQEAeLERLRTQLLFSHEEELSKLKE--DLEIEHQI---NIEKLKDNLGIHyKQQIDGLQNEMSQKIETMqFEKD 686
Cdd:pfam13166 279 DEFTEFQNR-LQKLIEKVESAISSLLAQLPAvsDLASLLSAfelDVEDIESEAEVL-NSQLDGLRRALEAKRKDP-FKSI 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 687 NLITKQNqlilEISKLKDLQQSLVNS--KSEEMTLQINELQKE-IEILRQEEKEKgtLEQEVQELQLKIELLEKQMkeke 763
Cdd:pfam13166 356 ELDSVDA----KIESINDLVASINELiaKHNEITDNFEEEKNKaKKKLRLHLVEE--FKSEIDEYKDKYAGLEKAI---- 425
|
170 180 190
....*....|....*....|....*....|...
gi 1622925510 764 NDLQEKFTQLEAENSILKDEKKALEDMLKIHTP 796
Cdd:pfam13166 426 NSLEKEIKNLEAEIKKLREEIKELEAQLRDHKP 458
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1861-2551 |
9.90e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.52 E-value: 9.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1861 EAISETSSQLEHAKVTQTELMRESFRQKqeatESLKCQEDLRE----RLHEESRAREqlavELSKAEgvidgyADEKTLF 1936
Cdd:PTZ00121 1091 EATEEAFGKAEEAKKTETGKAEEARKAE----EAKKKAEDARKaeeaRKAEDARKAE----EARKAE------DAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1937 ERQIQEKTDI-IDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEagpvEQQLLQETEKLMKE-KLEVQCQA 2014
Cdd:PTZ00121 1157 ARKAEDARKAeEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAE----EERKAEEARKAEDAkKAEAVKKA 1232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2015 EKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQAleKQLEKMRKFLDEQAID--REHERDVFQQEIQKL 2092
Cdd:PTZ00121 1233 EEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKKAEEKKKADeaKKAEEKKKADEAKKK 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2093 EQQLKVVPRFQPISEHQTREVEQLTNHLKEKTdKCSELLLSKEQLQRDIQERNEEIEKlefrvreleqallvsADTFQKV 2172
Cdd:PTZ00121 1311 AEEAKKADEAKKKAEEAKKKADAAKKKAEEAK-KAAEAAKAEAEAAADEAEAAEEKAE---------------AAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2173 EDRKQFGAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHmqlEIQKKESTTRLQELEQE 2252
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD---EAKKKAEEAKKADEAKK 1451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2253 NKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKITTDNKVIEEK---NELIRDL 2329
Cdd:PTZ00121 1452 KAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAkkaDEAKKAE 1531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2330 ETQIECLMSDQECVKrnREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEADSLKHqldmviAEKLALEQQVETTNE 2409
Cdd:PTZ00121 1532 EAKKADEAKKAEEKK--KADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK------AEEARIEEVMKLYEE 1603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2410 EMTFTKNILK---ETNFKMNQLTQElfslKRERESMEKIQSIPGKSVNMAiDDMSKDKPELEVVLTEDALKSLENQTYLK 2486
Cdd:PTZ00121 1604 EKKMKAEEAKkaeEAKIKAEELKKA----EEEKKKVEQLKKKEAEEKKKA-EELKKAEEENKIKAAEEAKKAEEDKKKAE 1678
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2487 SF-----EENGKGSIINLETRLLQLESTVRAKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEE 2551
Cdd:PTZ00121 1679 EAkkaeeDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1864-2587 |
9.98e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.52 E-value: 9.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1864 SETSSQLEHAKVTQTELMRESFRQKQEA--TESLKCQEDLRERLHEESRAREQLAVELSkaegvidgyadektlfeRQIQ 1941
Cdd:PTZ00121 1196 AEDARKAEAARKAEEERKAEEARKAEDAkkAEAVKKAEEAKKDAEEAKKAEEERNNEEI-----------------RKFE 1258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1942 EKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDDL 2021
Cdd:PTZ00121 1259 EARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKA 1338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2022 QKQVKALEIDVEEqvsrfielEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHERDVfqQEIQKLEQQLKVVPR 2101
Cdd:PTZ00121 1339 EEAKKAAEAAKAE--------AEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKA--DEAKKKAEEDKKKAD 1408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2102 FQPISEHQTREVEQLTNHLKEKTdKCSELLLSKEQLQR--DIQERNEEIEKLEFRVRELEQAlLVSADTFQKVEDRKQFG 2179
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEKK-KADEAKKKAEEAKKadEAKKKAEEAKKAEEAKKKAEEA-KKADEAKKKAEEAKKAD 1486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2180 AVEAKPELSLEVQLQAERDAIDRKEKEitNLEEQLEQFREELENKNEEVQQLHmqlEIQKKESTTRLQELEQENKLFKDD 2259
Cdd:PTZ00121 1487 EAKKKAEEAKKKADEAKKAAEAKKKAD--EAKKAEEAKKADEAKKAEEAKKAD---EAKKAEEKKKADELKKAEELKKAE 1561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2260 MEKlglaiKESDAVSTQDQHVLFGKFAQIIQEKEveiDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIEclmsd 2339
Cdd:PTZ00121 1562 EKK-----KAEEAKKAEEDKNMALRKAEEAKKAE---EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA----- 1628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2340 qECVKRNREEEIEQLNEVIEKlQQELANIGQKTLVDAHSLPEEADSLKHQldmviAEKLALEQQVETTNEEMTFTKnilK 2419
Cdd:PTZ00121 1629 -EEEKKKVEQLKKKEAEEKKK-AEELKKAEEENKIKAAEEAKKAEEDKKK-----AEEAKKAEEDEKKAAEALKKE---A 1698
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2420 ETNFKMNQLTQELFSLKRERESMEKIQSIPGKSVNMAIDDMSKDKPELEVVLTEDALKsleNQTYLKSFEENGKGSIINL 2499
Cdd:PTZ00121 1699 EEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEK---KKIAHLKKEEEKKAEEIRK 1775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2500 ETRLLQLESTVRAKDLELTQCYKQIKDMQEQGQSEIEVLQKKILNLQKILEEKVAA----ALVSQIQLEAVQEYAKFCQD 2575
Cdd:PTZ00121 1776 EKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAikevADSKNMQLEEADAFEKHKFN 1855
|
730
....*....|..
gi 1622925510 2576 NQTISSEPERTN 2587
Cdd:PTZ00121 1856 KNNENGEDGNKE 1867
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1836-2365 |
1.02e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.05 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1836 EIDPENEELVLNISSRLQAaVEKLLEAISETSSQLEHAKVTQTELmresfRQKQEATESLKCQEDLRERLHEEsraREQL 1915
Cdd:PRK03918 235 ELKEEIEELEKELESLEGS-KRKLEEKIRELEERIEELKKEIEEL-----EEKVKELKELKEKAEEYIKLSEF---YEEY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1916 AVELSKAEGVIDGYADEKTLFERQIQEKTDIIDRLEQ--ELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVE 1993
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERIKELEEKEERLEElkKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLT 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1994 -QQLLQETEKLMKEKLEVQCQAEKVRD---DLQKQVKALEIDVEEQVS---------RFIELEQEKN------AELMDLR 2054
Cdd:PRK03918 386 pEKLEKELEELEKAKEEIEEEISKITArigELKKEIKELKKAIEELKKakgkcpvcgRELTEEHRKElleeytAELKRIE 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2055 QQNQALEKQLEKMRKFLDEQAIDREHERDVFQQ-----EIQKLEQQLKVVPRFQpiSEHQTREVEQLTNH---------- 2119
Cdd:PRK03918 466 KELKEIEEKERKLRKELRELEKVLKKESELIKLkelaeQLKELEEKLKKYNLEE--LEKKAEEYEKLKEKliklkgeiks 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2120 LKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELeqallvSADTFQKVEDRKQfgavEAKPELSLEVQLQAERDA 2199
Cdd:PRK03918 544 LKKELEKLEELKKKLAELEKKLDELEEELAELLKELEEL------GFESVEELEERLK----ELEPFYNEYLELKDAEKE 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2200 IDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTtrlqelEQENKLFKDDMEKLGLAikesdavstqdqh 2279
Cdd:PRK03918 614 LEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS------EEEYEELREEYLELSRE------------- 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2280 vLFGKFAQiIQEKEVEIDQLNEQIMKLQQQLkittdnKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIE 2359
Cdd:PRK03918 675 -LAGLRAE-LEELEKRREEIKKTLEKLKEEL------EEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVG 746
|
....*.
gi 1622925510 2360 KLQQEL 2365
Cdd:PRK03918 747 EIASEI 752
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
155-468 |
1.10e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.03 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 155 THLEMMESELAGKQHEIEELNRELEEMRVTYG--TEGLQQLQEF-EAAIKQRDGI---ITQLTANLQQA--RREKDETMR 226
Cdd:PRK02224 370 SELEEAREAVEDRREEIEELEEEIEELRERFGdaPVDLGNAEDFlEELREERDELrerEAELEATLRTAreRVEEAEALL 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 227 E-------------------FLELTEQSQKLQIQFQQLQASETLRNSTHSStAADLLQAKQQIRTHQQQLEEQDHLLEDY 287
Cdd:PRK02224 450 EagkcpecgqpvegsphvetIEEDRERVEELEAELEDLEEEVEEVEERLER-AEDLVEAEDRIERLEERREDLEELIAER 528
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 288 QKKKEDFTMQISFLQEKIKVYEMEQDKKVENSNK--EEIQEKETIIEELNTKiIEEEKKTLELKDKLTAADKLLGELQEQ 365
Cdd:PRK02224 529 RETIEEKRERAEELRERAAELEAEAEEKREAAAEaeEEAEEAREEVAELNSK-LAELKERIESLERIRTLLAAIADAEDE 607
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 366 VVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEE--LQKRNHKDSQFETDIVQRMEqetqrKLEQLRAELDEmygq 443
Cdd:PRK02224 608 IERLREKREALAELNDERRERLAEKRERKRELEAEFDEarIEEAREDKERAEEYLEQVEE-----KLDELREERDD---- 678
|
330 340
....*....|....*....|....*
gi 1622925510 444 qiVQMKQELIRQHVSQMEELKTRHK 468
Cdd:PRK02224 679 --LQAEIGAVENELEELEELRERRE 701
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
189-898 |
1.16e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 45.21 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 189 GLQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQ-LQASETLRNSTHSSTAADLLQAK 267
Cdd:PTZ00440 359 SLEMLSMLDSLLIKKEKILNNLFNKLFGDLKEKIETLLDSEYFISKYTNIISLSEHtLKAAEDVLKENSQKIADYALYSN 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 268 QQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFL-----QEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEE 342
Cdd:PTZ00440 439 LEIIEIKKKYDEKINELKKSINQLKTLISIMKSFydliiSEKDSMDSKEKKESSDSNYQEKVDELLQIINSIKEKNNIVN 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 343 KKTLELKDKLTAADKLLGEL-------------QEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQKRNH 409
Cdd:PTZ00440 519 NNFKNIEDYYITIEGLKNEIeglielikyylqsIETLIKDEKLKRSMKNDIKNKIKYIEENVDHIKDIISLNDEIDNIIQ 598
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 410 KDSQFETDIVQRMEQET------QRKLEQLRAELDEMYGQQIVQMKQELIRQHVSQMEELKTrhKGEMENALrsyPNITV 483
Cdd:PTZ00440 599 QIEELINEALFNKEKFInekndlQEKVKYILNKFYKGDLQELLDELSHFLDDHKYLYHEAKS--KEDLQTLL---NTSKN 673
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 484 NEDQIKLMNVAINELNIKLQDTNSQKEK-LKEELgvileekcaLQRQLEDLFEELSFSREQIqraRQTIAEQESKLNEAQ 562
Cdd:PTZ00440 674 EYEKLEFMKSDNIDNIIKNLKKELQNLLsLKENI---------IKKQLNNIEQDISNSLNQY---TIKYNDLKSSIEEYK 741
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 563 KSLSTVEDLKAEIVSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRmaesqeaelERLRTQLLFSHEEELSKLKE 642
Cdd:PTZ00440 742 EEEEKLEVYKHQIINRKNEFILHLYENDKDLPDGKNTYEEFLQYKDTILNK---------ENKISNDINILKENKKNNQD 812
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 643 DLEiEHQINIEKLKDNLGIHYkQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILeisklkdlqqSLVNSKSEEMTLQIN 722
Cdd:PTZ00440 813 LLN-SYNILIQKLEAHTEKND-EELKQLLQKFPTEDENLNLKELEKEFNENNQIV----------DNIIKDIENMNKNIN 880
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 723 ELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKEND-LQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEE 801
Cdd:PTZ00440 881 IIKTLNIAINRSNSNKQLVEHLLNNKIDLKNKLEQHMKIINTDnIIQKNEKLNLLNNLNKEKEKIEKQLSDTKINNLKMQ 960
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 802 RLIFIDSIKsKSKDSVwEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLlkVKDDLEDS 881
Cdd:PTZ00440 961 IEKTLEYYD-KSKENI-NGNDGTHLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIKKQHDDIIEL--IDKLIKEK 1036
|
730
....*....|....*..
gi 1622925510 882 KNKQELEYKSKLKALNE 898
Cdd:PTZ00440 1037 GKEIEEKVDQYISLLEK 1053
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
301-586 |
1.28e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 301 LQEKIKVYEMEQDKKVENSNKEEI-QEKETIIEELNT--KIIEEEKKTLELKDKLTAadkLLGELQEQVVQKNQEIKNMK 377
Cdd:pfam17380 278 VQHQKAVSERQQQEKFEKMEQERLrQEKEEKAREVERrrKLEEAEKARQAEMDRQAA---IYAEQERMAMERERELERIR 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 378 LElTNSKQKERQSSEEIKQLMGTVEELQK----RNHKDSQFETDI-----VQRMEQETQRK-------LEQLRAELDEMY 441
Cdd:pfam17380 355 QE-ERKRELERIRQEEIAMEISRMRELERlqmeRQQKNERVRQELeaarkVKILEEERQRKiqqqkveMEQIRAEQEEAR 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 442 GQQIVQMK------------QELIRQH----VSQMEELKTRHKGEMENALRSYPNItvNEDQIKLMNVAINELNIKLQDT 505
Cdd:pfam17380 434 QREVRRLEeeraremervrlEEQERQQqverLRQQEEERKRKKLELEKEKRDRKRA--EEQRRKILEKELEERKQAMIEE 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 506 NSQKEKLKEELGvilEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVE---DLKAEIVSASESR 582
Cdd:pfam17380 512 ERKRKLLEKEME---ERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMErerEMMRQIVESEKAR 588
|
....
gi 1622925510 583 KELE 586
Cdd:pfam17380 589 AEYE 592
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
151-787 |
1.36e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.89 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 151 QYSLTHLEMMESELAGKQHEIEELNRELEEMrvtygtEGLQQLQEFEaaikqrdgiITQLTANLQQARREK---DETMRE 227
Cdd:PRK01156 179 RAEISNIDYLEEKLKSSNLELENIKKQIADD------EKSHSITLKE---------IERLSIEYNNAMDDYnnlKSALNE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 228 FLELTEQSQKLQIQFQQLQASetlrnsthsstaadlLQAKQQIRTHQQQLEEQDHLLEDYQ--KKKEDFTMQISFLQEKI 305
Cdd:PRK01156 244 LSSLEDMKNRYESEIKTAESD---------------LSMELEKNNYYKELEERHMKIINDPvyKNRNYINDYFKYKNDIE 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 306 KVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELkdkltaaDKLLGELQEQVVQKNQEIKNMKleltNSKQ 385
Cdd:PRK01156 309 NKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDDL-------NNQILELEGYEMDYNSYLKSIE----SLKK 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 386 KERQSSEEIKQLMGTVEELQKRNHKDSqfetDIVQRMEQETQRKLEQLRAELDEMygqqivQMKQELIRQHVSQMEElkt 465
Cdd:PRK01156 378 KIEEYSKNIERMSAFISEILKIQEIDP----DAIKKELNEINVKLQDISSKVSSL------NQRIRALRENLDELSR--- 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 466 rhKGEMENALRSYP--NITVNEDQIklmNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDL----FEELSF 539
Cdd:PRK01156 445 --NMEMLNGQSVCPvcGTTLGEEKS---NHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLeseeINKSIN 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 540 SREQIQRARQTIAEQESKLNEAqkslstvedlkaeivsasesrKELELKHEAEVTNYK-IKLEMLEKEKNAVLDRMAESQ 618
Cdd:PRK01156 520 EYNKIESARADLEDIKIKINEL---------------------KDKHDKYEEIKNRYKsLKLEDLDSKRTSWLNALAVIS 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 619 EAELERLRTQllfsHEEELSKLKEDLEIEHQINIEKLKDNLGI-HYKQQIDGLQNEMSQKIETMQFEK---DNLITKQNQ 694
Cdd:PRK01156 579 LIDIETNRSR----SNEIKKQLNDLESRLQEIEIGFPDDKSYIdKSIREIENEANNLNNKYNEIQENKiliEKLRGKIDN 654
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 695 LILEISKLKDLQQSL--VNSKSEEMTLQINELQKEIEILRQEEKEKgtlEQEVQELQLKIELLEKQMKEKENDLqEKFTQ 772
Cdd:PRK01156 655 YKKQIAEIDSIIPDLkeITSRINDIEDNLKKSRKALDDAKANRARL---ESTIEILRTRINELSDRINDINETL-ESMKK 730
|
650
....*....|....*
gi 1622925510 773 LEAENSILKDEKKAL 787
Cdd:PRK01156 731 IKKAIGDLKRLREAF 745
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
3288-3427 |
1.38e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3288 AQLSEEHGRNLELQVLLESEKVRIREmsstldRERELHAQLQSNDGtgqsrpslpseDLLKELQKQLEEKHSRIVELLNE 3367
Cdd:COG4913 298 EELRAELARLEAELERLEARLDALRE------ELDELEAQIRGNGG-----------DRLEQLEREIERLERELEERERR 360
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 3368 TEKY-------KLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHELQSKVEDLQRQLEEKRQQ 3427
Cdd:COG4913 361 RARLeallaalGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAE 427
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
3110-3445 |
1.46e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.67 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3110 LKREQENEKSSQELLEYNIQQKQSQMLEMQVELSSMKDRATELQE--QLSSEKMVVAELRSELAQTKLELETTL------ 3181
Cdd:PRK03918 243 LEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElkEKAEEYIKLSEFYEEYLDELREIEKRLsrleee 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3182 -KAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAKLGHSEERDKEELEDLKFSLESQKQRNLQ 3260
Cdd:PRK03918 323 iNGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEE 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3261 LNLLLEQQKQLLDESQQKIESQRM-------------LYDAQLSEEHGRNLELQVLLESEKVRiREMSSTLDRERELHAQ 3327
Cdd:PRK03918 403 IEEEISKITARIGELKKEIKELKKaieelkkakgkcpVCGRELTEEHRKELLEEYTAELKRIE-KELKEIEEKERKLRKE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3328 LQSNDGTGQSRPSLPSEDLLKELQKQLEEKHSRIV--ELLNETEKY-----KLDSLQTRQQMEKDRQVHRKTLQTEQEan 3400
Cdd:PRK03918 482 LRELEKVLKKESELIKLKELAEQLKELEEKLKKYNleELEKKAEEYeklkeKLIKLKGEIKSLKKELEKLEELKKKLA-- 559
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1622925510 3401 tEGQKKMHELQSKVEDLQRQLEEKR-QQVYKLDLEGQRLQGIMQEF 3445
Cdd:PRK03918 560 -ELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEY 604
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1852-2415 |
1.64e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 44.71 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1852 LQAAVEKLLEAISETSSQLEHAKVTQTELMRESFRQKQEateslkCQEDLRERLHEESRAREQLAVELSKAEGVIDGYA- 1930
Cdd:pfam05483 188 LNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQH------LEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTf 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1931 --DEKTLFERQIQEKTDIIDRLEQELLCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLLQETEKLMKEKL 2008
Cdd:pfam05483 262 llEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2009 EVQCQAEKVRDDLQKQVKALE---------IDVEEQVSRFIELE-QEKNAELMDLRQQNQALEKQLEKMRKFL--DEQAI 2076
Cdd:pfam05483 342 KAKAAHSFVVTEFEATTCSLEellrteqqrLEKNEDQLKIITMElQKKSSELEEMTKFKNNKEVELEELKKILaeDEKLL 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2077 DREHERDVFQQEIQKLEQQLKV---------------VPRFQPISEHQTREVEQLTNHL--------------------- 2120
Cdd:pfam05483 422 DEKKQFEKIAEELKGKEQELIFllqarekeihdleiqLTAIKTSEEHYLKEVEDLKTELekeklknieltahcdklllen 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2121 KEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEAKPEL-SLEVQLQAERDA 2199
Cdd:pfam05483 502 KELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLdKSEENARSIEYE 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2200 IDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELeqenKLFKDDMEKLGLAIKESDAvstqdqh 2279
Cdd:pfam05483 582 VLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQL----NAYEIKVNKLELELASAKQ------- 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2280 vlfgKFAQIIQ--EKEVEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNE- 2356
Cdd:pfam05483 651 ----KFEEIIDnyQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSe 726
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 2357 --VIEKLQQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTK 2415
Cdd:pfam05483 727 lgLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
318-772 |
1.66e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.52 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 318 NSNKEEIQEKETIIEELNTkiieeekkTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQL 397
Cdd:PRK11281 49 NKQKLLEAEDKLVQQDLEQ--------TLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLST 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 398 MgTVEELQkrnhkdsqfetdivQRMEQeTQRKLEQLRAELDEMYGQQIVQMkqelirqhvSQMEelktrhkgemenalRS 477
Cdd:PRK11281 121 L-SLRQLE--------------SRLAQ-TLDQLQNAQNDLAEYNSQLVSLQ---------TQPE--------------RA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 478 YPNITVNEDQIKLMNVAINELNI-KLQDTNSQKEKLKEELgVILEEKCALQR-------QLEDLFE-ELSFSREQIQRAR 548
Cdd:PRK11281 162 QAALYANSQRLQQIRNLLKGGKVgGKALRPSQRVLLQAEQ-ALLNAQNDLQRkslegntQLQDLLQkQRDYLTARIQRLE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 549 QTIAEQESKLNEAQKSLS--TVE-----DLKAEIVSASESRKELELKHeaEVTNYKI----KLEMLEKE----KNaVLDR 613
Cdd:PRK11281 241 HQLQLLQEAINSKRLTLSekTVQeaqsqDEAARIQANPLVAQELEINL--QLSQRLLkateKLNTLTQQnlrvKN-WLDR 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 614 MAESQEAelerlrtqllfsheeelsklkedleIEHQINIekLKDNL---GIHYKQQI----DGLQNEMSQKIETM---QF 683
Cdd:PRK11281 318 LTQSERN-------------------------IKEQISV--LKGSLllsRILYQQQQalpsADLIEGLADRIADLrleQF 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 684 EkdnlITKQNQlilEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEekekgTLEQEVQEL--QL----KIELLEK 757
Cdd:PRK11281 371 E----INQQRD---ALFQPDAYIDKLEAGHKSEVTDEVRDALLQLLDERRE-----LLDQLNKQLnnQLnlaiNLQLNQQ 438
|
490
....*....|....*
gi 1622925510 758 QMKEKENDLQEKFTQ 772
Cdd:PRK11281 439 QLLSVSDSLQSTLTQ 453
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
158-989 |
1.75e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.40 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 158 EMMESELAGKQHEIEELNRELEEmRVTYGTEGLQQLQEFEAAIKQRdgiITQLTANLqqarrEKDETMREFLELTEQSqk 237
Cdd:pfam01576 60 EEMRARLAARKQELEEILHELES-RLEEEEERSQQLQNEKKKMQQH---IQDLEEQL-----DEEEAARQKLQLEKVT-- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 238 LQIQFQQLQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDKKVE 317
Cdd:pfam01576 129 TEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEK 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 318 NSNK---------EEIQEKETIIEELNTKIIEEEKKTLELKDKL-------TAADKLLGELQEQVVQKNQEIKNMKLELT 381
Cdd:pfam01576 209 AKRKlegestdlqEQIAELQAQIAELRAQLAKKEEELQAALARLeeetaqkNNALKKIRELEAQISELQEDLESERAARN 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 382 NSKQKERQSSEEIKQLMGTVEelqkrnhkDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMkQELIRQHVSQME 461
Cdd:pfam01576 289 KAEKQRRDLGEELEALKTELE--------DTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQL-QEMRQKHTQALE 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 462 ELKTrhkgEMENALRSYPNITVN----EDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEEL 537
Cdd:pfam01576 360 ELTE----QLEQAKRNKANLEKAkqalESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 538 SFSREQIQRARQTIAEQESKLNEAQKSLSTVEdlkaeivSASESRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAES 617
Cdd:pfam01576 436 SKLQSELESVSSLLNEAEGKNIKLSKDVSSLE-------SQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 618 QEAEleRLRTQLLFSHEEELSKLKEDLEiEHQINIEKLKDNLGiHYKQQIDGLQNEMSQKIET----------MQFEKDN 687
Cdd:pfam01576 509 EEAK--RNVERQLSTLQAQLSDMKKKLE-EDAGTLEALEEGKK-RLQRELEALTQQLEEKAAAydklektknrLQQELDD 584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 688 LITKQNQLILEISKLKDLQQSLVNSKSEEMTLQiNELQKEIEILRQEEKEKGT----LEQEVQELQLKIELLEKQMKEKE 763
Cdd:pfam01576 585 LLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAIS-ARYAEERDRAEAEAREKETralsLARALEEALEAKEELERTNKQLR 663
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 764 NDLQEKFTQ-----------------LEAENSILKDEKKALEDMLKIhTPDNQEERLIFIDSIKSKskdsvWEKEIEILT 826
Cdd:pfam01576 664 AEMEDLVSSkddvgknvhelerskraLEQQVEEMKTQLEELEDELQA-TEDAKLRLEVNMQALKAQ-----FERDLQARD 737
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 827 EENEDLKQQCIQLNEEIE-------KQRNTFSFAEKNFEVNYQELQEEYACLLKVKDDledsKNKQELEYKSKLKALNEE 899
Cdd:pfam01576 738 EQGEEKRRQLVKQVRELEaelederKQRAQAVAAKKKLELDLKELEAQIDAANKGREE----AVKQLKKLQAQMKDLQRE 813
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 900 LHLQRINPTTVKTKSSVFDED-KTFVAETLEMGE----------VVEKDTTELMEKL-------EVTKREKLELSQRLAD 961
Cdd:pfam01576 814 LEEARASRDEILAQSKESEKKlKNLEAELLQLQEdlaaserarrQAQQERDELADEIasgasgkSALQDEKRRLEARIAQ 893
|
890 900
....*....|....*....|....*...
gi 1622925510 962 LSEQLKQKHGEISFLNEEVKSLKQEKEQ 989
Cdd:pfam01576 894 LEEELEEEQSNTELLNDRLRKSTLQVEQ 921
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
614-788 |
1.82e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 614 MAESQEA--ELERLRTQLlFSHEEELSKLKEDLEiEHQINIEKLKDNLgIHYKQQIDGLQNEMSqKIETMQFEKDNLITK 691
Cdd:COG1579 2 MPEDLRAllDLQELDSEL-DRLEHRLKELPAELA-ELEDELAALEARL-EAAKTELEDLEKEIK-RLELEIEEVEARIKK 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 692 QNQLILEISKLKDLQQslvnskseeMTLQINELQKEIEILRQEEKE----KGTLEQEVQELQLKIELLEKQMKEKENDLQ 767
Cdd:COG1579 78 YEEQLGNVRNNKEYEA---------LQKEIESLKRRISDLEDEILElmerIEELEEELAELEAELAELEAELEEKKAELD 148
|
170 180
....*....|....*....|.
gi 1622925510 768 EKFTQLEAENSILKDEKKALE 788
Cdd:COG1579 149 EELAELEAELEELEAEREELA 169
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3076-3431 |
2.00e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3076 EYQAAMEYLQKADRRSLLSEIQALHAQMNGRKITLKREQENEKSSQElleynIQQKQSQMLEMQVELSSMKDRATELQEQ 3155
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAE-----AAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3156 LSSEKMVVAELRSELAQTKLELETTLKAQHKHLKELEAFRL------EVKDKTDEVHLLNDT--LASEQKKSREL-QWAL 3226
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAakkkadEAKKKAEEKKKADEAkkKAEEAKKADEAkKKAE 1454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3227 EKEKAKLGHSEERDKEELEDLKFSLEsQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQLSEEHGRNLELQVLLES 3306
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAE-EAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEA 1533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3307 EKVRIREMSSTLDRERELHaqlqsndgtgQSRPSLPSEDLLKELQKQLEEKHS----RIVELLNETEKYKLDSLQTRQQM 3382
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADELK----------KAEELKKAEEKKKAEEAKKAEEDKnmalRKAEEAKKAEEARIEEVMKLYEE 1603
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1622925510 3383 EKDRQVHRKTLQTEQEANTEGQKKMHELQSKVEDLQRQLEEKRQQVYKL 3431
Cdd:PTZ00121 1604 EKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEEL 1652
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
2178-2408 |
2.05e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2178 FGAVEAKPELSLEVQLQAERDAIDRKEKEI-------TNLEEQLEQFREELENKNEEVQQLHMQLEIQKKE---STTRLQ 2247
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELaalkkeeKALLKQLAALERRIAALARRIRALEQELAALEAElaeLEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2248 ELEQENKLFKDDMEKLGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVeIDQLNEQIMKLQQQLKITTDNkvIEEKNELIR 2327
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQY-LKYLAPARREQAEELRADLAE--LAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2328 DLETQIECLMSDQECVKRNREEEIEQLNEVIEKLQQELANIGQKtlvdAHSLPEEADSLKHQLDMVIAEKLALEQQVETT 2407
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAE----LAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
.
gi 1622925510 2408 N 2408
Cdd:COG4942 247 G 247
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
651-850 |
2.11e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 651 NIEKLKdnlgiHYKQQIDGLQNEMSQ---KIETMQFEKDNLITKQNQLileiSKLKDLQQSLVNSKSEEMTLQinELQKE 727
Cdd:COG4913 608 NRAKLA-----ALEAELAELEEELAEaeeRLEALEAELDALQERREAL----QRLAEYSWDEIDVASAEREIA--ELEAE 676
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 728 IEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEkendLQEKFTQLEAENSILKDEKKALEDMLKIHTPDNQEERLIFID 807
Cdd:COG4913 677 LERLDASSDDLAALEEQLEELEAELEELEEELDE----LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLE 752
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1622925510 808 SIKSKSKDSVWEKEI-EILTEENEDLKQQCIQLNEEIEKQRNTF 850
Cdd:COG4913 753 ERFAAALGDAVERELrENLEERIDALRARLNRAEEELERAMRAF 796
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1980-2461 |
2.20e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1980 RQKEAMKAEAGPVEQQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIEL----EQEKNAELMDLRQ 2055
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAkkaeEAKKADEAKKAEE 1544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2056 QNQALE-KQLEKMRKFLD----EQAIDREHERDVFQQEIQKLEQQlkvvprfqpiseHQTREVEQLTNHLKEKTDKCSEL 2130
Cdd:PTZ00121 1545 KKKADElKKAEELKKAEEkkkaEEAKKAEEDKNMALRKAEEAKKA------------EEARIEEVMKLYEEEKKMKAEEA 1612
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2131 LLSKEQlqrdiQERNEEIEKLEFRVRELEQALLVSADTFQKVEDRKQfgaveAKPELSLEVQLQAERDAIDRKEKEITNL 2210
Cdd:PTZ00121 1613 KKAEEA-----KIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK-----AEEENKIKAAEEAKKAEEDKKKAEEAKK 1682
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2211 EEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAiKESDAVSTQDQHVLFG---KFAQ 2287
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKE-AEEDKKKAEEAKKDEEekkKIAH 1761
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2288 IIQEKEVEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQE----CVKRNREEEIEQLNEVI--EKL 2361
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKegnlVINDSKEMEDSAIKEVAdsKNM 1841
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2362 QQELANIGQKTLVDAHSLPEEADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKE----TNFKMN-------QLTQ 2430
Cdd:PTZ00121 1842 QLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEReipnNNMAGKnndiiddKLDK 1921
|
490 500 510
....*....|....*....|....*....|.
gi 1622925510 2431 ELFSLKRERESMEKIQSIPGKsvNMAIDDMS 2461
Cdd:PTZ00121 1922 DEYIKRDAEETREEIIKISKK--DMCINDFS 1950
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1857-2632 |
2.22e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1857 EKLLEAISETSSQLEHAKVTQTELMRESFRQKQEATESLKCQEDLRE----RLHEESRAREQLAVELSKAEGVIDGYADE 1932
Cdd:TIGR02169 173 EKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEkreyEGYELLKEKEALERQKEAIERQLASLEEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1933 KTLFERQIQEKTDIIDRLEQELlcasnrLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQLlQETEKLMKEKLEVQC 2012
Cdd:TIGR02169 253 LEKLTEEISELEKRLEEIEQLL------EELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSI-AEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2013 QAEKVRDDLQKQVKALEIDVEEQVSRFIELE---QEKNAELMDLRQQNQALEKQLEKMRkfldEQAIDREHERDVFQQEI 2089
Cdd:TIGR02169 326 KLEAEIDKLLAEIEELEREIEEERKRRDKLTeeyAELKEELEDLRAELEEVDKEFAETR----DELKDYREKLEKLKREI 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2090 QKLEQQLKvvpRFQPISEHQTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVSADTF 2169
Cdd:TIGR02169 402 NELKRELD---RLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEY 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2170 QKVEDR-----KQFGAVEAKPELSLEVQL--QAERDAIDRKEKEITNLEEQLEQFREE------------LEN---KNEE 2227
Cdd:TIGR02169 479 DRVEKElsklqRELAEAEAQARASEERVRggRAVEEVLKASIQGVHGTVAQLGSVGERyataievaagnrLNNvvvEDDA 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2228 VQQLHMQLEIQKKESTTRLQELeqeNKLfkDDMEKLGLAIKESDAVSTQDQHVLFGK-----FAQIIQEKEVEIDQlnEQ 2302
Cdd:TIGR02169 559 VAKEAIELLKRRKAGRATFLPL---NKM--RDERRDLSILSEDGVIGFAVDLVEFDPkyepaFKYVFGDTLVVEDI--EA 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2303 IMKLQQQLKITTDNKVIEEKNELIrdleTQIECLMSDQECVKRNREEEIEQLNEVIEKLQQELANIGQKTlvdaHSLPEE 2382
Cdd:TIGR02169 632 ARRLMGKYRMVTLEGELFEKSGAM----TGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL----RRIENR 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2383 ADSLKHQLDMVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQELFSLKREresmekiqsipgksvnmaIDDMSK 2462
Cdd:TIGR02169 704 LDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE------------------LKELEA 765
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2463 DKPELEVVLT--EDALKSLENQTYLKSFEENGKGS------IINLETRLLQLESTVRAKDLELTQCYKQIKDMQEQG--- 2531
Cdd:TIGR02169 766 RIEELEEDLHklEEALNDLEARLSHSRIPEIQAELskleeeVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRidl 845
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2532 -------QSEIEVLQKKILNLQKILEEKVAAALvsqiQLEAVQEYAKFCQDNQTISSEPERTNIQNLNQLREDESgSNIS 2604
Cdd:TIGR02169 846 keqiksiEKEIENLNGKKEELEEELEELEAALR----DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKR-KRLS 920
|
810 820
....*....|....*....|....*...
gi 1622925510 2605 ALTLRISELESQLVEMHTSLILGKEQVE 2632
Cdd:TIGR02169 921 ELKAKLEALEEELSEIEDPKGEDEEIPE 948
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
266-460 |
2.26e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 266 AKQQIRTHQQQLEEQDHL----LEDYQKK-------KEDFTMQISFLQEKIKVYEMEQDK-----------------KVE 317
Cdd:PHA02562 193 IQQQIKTYNKNIEEQRKKngenIARKQNKydelveeAKTIKAEIEELTDELLNLVMDIEDpsaalnklntaaakiksKIE 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 318 NSNKEE-IQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQvVQKNQEIKNMKLELTNSKQKERQSSEEIKQ 396
Cdd:PHA02562 273 QFQKVIkMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTA-IDELEEIMDEFNEQSKKLLELKNKISTNKQ 351
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 397 LMGTVEELQKRNHKD-SQFETDIVQRMEQetqrkLEQLRAELDEMYGQQIVQMKQELIRQHVSQM 460
Cdd:PHA02562 352 SLITLVDKAKKVKAAiEELQAEFVDNAEE-----LAKLQDELDKIVKTKSELVKEKYHRGIVTDL 411
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
2135-2364 |
2.36e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 43.08 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2135 EQLQRDIQERNEEIEKLEFRVRELEQALLV---SADTFQKVEDRKQFGAVEAKPELslevqlQAERDAIDRKEKEITNLE 2211
Cdd:smart00787 73 KELKKYISEGRDLFKEIEEETLINNPPLFKeyfSASPDVKLLMDKQFQLVKTFARL------EAKKMWYEWRMKLLEGLK 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2212 EQLEQFREELENKNEEVQQ-------LHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKEsdAVSTQDQHvlfgk 2284
Cdd:smart00787 147 EGLDENLEGLKEDYKLLMKelellnsIKPKLRDRKDALEEELRQLKQLEDELEDCDPTELDRAKE--KLKKLLQE----- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2285 faqiIQEKEVEIDQLNEQIMKLQQqlkittdnkVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEKLQQE 2364
Cdd:smart00787 220 ----IMIKVKKLEELEEELQELES---------KIEDLTNKKSELNTEIAEAEKKLEQCRGFTFKEIEKLKEQLKLLQSL 286
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
2141-2371 |
2.50e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2141 IQERNEEIEKLEFRVRELEQALlvsaDTFQKVEDRkqfgaveakpelslevQLQAERDAIDRKEKEITNLEEQLEQFREE 2220
Cdd:PHA02562 176 IRELNQQIQTLDMKIDHIQQQI----KTYNKNIEE----------------QRKKNGENIARKQNKYDELVEEAKTIKAE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2221 LENKNEEVQQLHMQLEiqkkESTTRLQELEQENKLFKDDMEKLGLAIK-----------------ESDAVS--TQDQHVL 2281
Cdd:PHA02562 236 IEELTDELLNLVMDIE----DPSAALNKLNTAAAKIKSKIEQFQKVIKmyekggvcptctqqiseGPDRITkiKDKLKEL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2282 FGKFAQI---IQEKEVEIDQLNEQIMKLQQ-QLKITTDNKVIEEKNELIRDLETQIECLMSDqecvKRNREEEIEQLNEV 2357
Cdd:PHA02562 312 QHSLEKLdtaIDELEEIMDEFNEQSKKLLElKNKISTNKQSLITLVDKAKKVKAAIEELQAE----FVDNAEELAKLQDE 387
|
250
....*....|....
gi 1622925510 2358 IEKLQQELANIGQK 2371
Cdd:PHA02562 388 LDKIVKTKSELVKE 401
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
185-464 |
2.53e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 43.86 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 185 YGTEGLQQLQEFEAAIKQrDGIITQLTAnlQQARREKDETMrefleLTEQSQKLQIQFQQLQASeTLRNSTHSSTAADLL 264
Cdd:pfam05667 211 RNAAELAAAQEWEEEWNS-QGLASRLTP--EEYRKRKRTKL-----LKRIAEQLRSAALAGTEA-TSGASRSAQDLAELL 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 265 QAKQQIRTHQQQLEEQDHLLedyQKKKEDFTmQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKK 344
Cdd:pfam05667 282 SSFSGSSTTDTGLTKGSRFT---HTEKLQFT-NEAPAATSSPPTKVETEEELQQQREEELEELQEQLEDLESSIQELEKE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 345 TLELKDKLTAADKLLGELQEQVVQKNQEIKNMK--LEL-----TNSKQKER---QSSEEIKQLMGTVEELQK------RN 408
Cdd:pfam05667 358 IKKLESSIKQVEEELEELKEQNEELEKQYKVKKktLDLlpdaeENIAKLQAlvdASAQRLVELAGQWEKHRVplieeyRA 437
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622925510 409 HKDSQFETdivqrmEQETQRKLEQ---LRAELDEMygQQIVQMKQELIRQHVSQMEELK 464
Cdd:pfam05667 438 LKEAKSNK------EDESQRKLEEikeLREKIKEV--AEEAKQKEELYKQLVAEYERLP 488
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
701-1005 |
2.73e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.90 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 701 KLKDLQQSLVNSKSE--EMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENS 778
Cdd:PRK03918 194 LIKEKEKELEEVLREinEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKK 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 779 ILKDEKKALEDMLKIHTPDNQEERLI-FIDSIKSKSKDSvwEKEIEILTEENEDLKQQCIQL---NEEIEKQRNTFSFAE 854
Cdd:PRK03918 274 EIEELEEKVKELKELKEKAEEYIKLSeFYEEYLDELREI--EKRLSRLEEEINGIEERIKELeekEERLEELKKKLKELE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 855 KNFEVnYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHlqrinpttvKTKSSVFDEDKTFVAETLEMgEVV 934
Cdd:PRK03918 352 KRLEE-LEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELE---------KAKEEIEEEISKITARIGEL-KKE 420
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 935 EKDTTELMEKLEVTKRE----KLELSQRlaDLSEQLKQKHGEISFLNEEVKSLKQEKEQVLLRCRELEIIINHNR 1005
Cdd:PRK03918 421 IKELKKAIEELKKAKGKcpvcGRELTEE--HRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKES 493
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
3147-3427 |
2.75e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3147 DRATELQEQLSsekmvvaELRSELAQTKLELETTLKAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQwal 3226
Cdd:COG4942 20 DAAAEAEAELE-------QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE--- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3227 ekekaklghseerdkEELEDLKFSLESQKQrnlqlnllleqqkqlldesqqkiESQRMLYDAQLSeehGRNLELQVLLES 3306
Cdd:COG4942 90 ---------------KEIAELRAELEAQKE-----------------------ELAELLRALYRL---GRQPPLALLLSP 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3307 EK----VRIREMSSTLDRERELHAQLQSNDgtgqsrpslpsEDLLKELQKQLEEKHSRIVELLNETEkykldslQTRQQM 3382
Cdd:COG4942 129 EDfldaVRRLQYLKYLAPARREQAEELRAD-----------LAELAALRAELEAERAELEALLAELE-------EERAAL 190
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1622925510 3383 EKDRQVHRKTLQTEQEANTEGQKKMHELQSKVEDLQRQLEEKRQQ 3427
Cdd:COG4942 191 EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
3115-3448 |
2.80e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3115 ENEKSSQEL--LEYNIQQKQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAELRSELAQTKLELETTLKaqhkHLKELE 3192
Cdd:PRK02224 245 EHEERREELetLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEA----RREELE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3193 AFRLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAKLGHSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLL 3272
Cdd:PRK02224 321 DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERF 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3273 D---ESQQKIESQRMLYDAQLSEEHGRNLELQVLLESEKVRIREMSSTLDR----------ERELHAqlqsnDGTGQSRP 3339
Cdd:PRK02224 401 GdapVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAgkcpecgqpvEGSPHV-----ETIEEDRE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3340 SLPS-EDLLKELQKQLEEKHSRI--VELLNETEKYKLDSLQTRQQMEKDRQVHRKTLQTEQEantegqkKMHELQSKVED 3416
Cdd:PRK02224 476 RVEElEAELEDLEEEVEEVEERLerAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRE-------RAEELRERAAE 548
|
330 340 350
....*....|....*....|....*....|..
gi 1622925510 3417 LQRQLEEKRQQVYKLDLEGQRLQGIMQEFQKQ 3448
Cdd:PRK02224 549 LEAEAEEKREAAAEAEEEAEEAREEVAELNSK 580
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
148-577 |
2.82e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.90 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 148 QGAQYSLTHLEMMESELAGKQHEIEELNRELEEMRVTYGT-EGLQQLQEFEAAIKQRDGIIT--QLTANLQQARREKDET 224
Cdd:PRK03918 324 NGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELyEEAKAKKEELERLKKRLTGLTpeKLEKELEELEKAKEEI 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 225 MREFLELTEQSQKLQIQFQQLQ-ASETL-----------RNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKE 292
Cdd:PRK03918 404 EEEISKITARIGELKKEIKELKkAIEELkkakgkcpvcgRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELR 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 293 DFTMQISFLQEKIKVYEM-EQDKKVENS----NKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEqVV 367
Cdd:PRK03918 484 ELEKVLKKESELIKLKELaEQLKELEEKlkkyNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAE-LE 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 368 QKNQEIKNMKLELtnSKQKERQSSEEIKQLMGTVEELQKRNH-----KDSQFETDIVQRMEQETQRKLEQLRAELDEMYG 442
Cdd:PRK03918 563 KKLDELEEELAEL--LKELEELGFESVEELEERLKELEPFYNeylelKDAEKELEREEKELKKLEEELDKAFEELAETEK 640
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 443 QqivqmkqelIRQHVSQMEELKTRH-KGEMENALRSYpniTVNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILE 521
Cdd:PRK03918 641 R---------LEELRKELEELEKKYsEEEYEELREEY---LELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622925510 522 EKCALqrqledlfEELSFSREQIQRARQTIAEQESKLNEAqkSLSTVEDLKAEIVS 577
Cdd:PRK03918 709 AKKEL--------EKLEKALERVEELREKVKKYKALLKER--ALSKVGEIASEIFE 754
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
2201-2371 |
2.85e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 43.26 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2201 DRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQE--------------LEQENKLFKDDMEKLGLA 2266
Cdd:pfam15905 148 DGTQKKMSSLSMELMKLRNKLEAKMKEVMAKQEGMEGKLQVTQKNLEHskgkvaqleeklvsTEKEKIEEKSETEKLLEY 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2267 IKESDAVSTQDQhvlfgKFAQIIQEKEVEIDQLNEQIMKLQQQL--KITTDNKVIEEKNELIRDLETQIECLMSDQECVK 2344
Cdd:pfam15905 228 ITELSCVSEQVE-----KYKLDIAQLEELLKEKNDEIESLKQSLeeKEQELSKQIKDLNEKCKLLESEKEELLREYEEKE 302
|
170 180
....*....|....*....|....*..
gi 1622925510 2345 RNREEEIEQLNEVIEKLQQELANIGQK 2371
Cdd:pfam15905 303 QTLNAELEELKEKLTLEEQEHQKLQQK 329
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
531-792 |
3.49e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 531 EDLFEELSFS------REQIQRARQTIAEQESKLNEAQKSLSTVEDLKaeivsasesrKELELKHEAEVTNYKIKLEMLE 604
Cdd:PHA02562 157 EDLLDISVLSemdklnKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNI----------EEQRKKNGENIARKQNKYDELV 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 605 KEknavldrmAESQEAELERLRTQLLfsheeelsklkedleiEHQINIEKLKDNLGiHYKQQIDGLQNEMSQ--KIETMQ 682
Cdd:PHA02562 227 EE--------AKTIKAEIEELTDELL----------------NLVMDIEDPSAALN-KLNTAAAKIKSKIEQfqKVIKMY 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 683 FEKDNLITKQNQLILEISKLKDLQQSLVnskseEMTLQINELQKEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMK-- 760
Cdd:PHA02562 282 EKGGVCPTCTQQISEGPDRITKIKDKLK-----ELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLItl 356
|
250 260 270
....*....|....*....|....*....|...
gi 1622925510 761 -EKENDLQEKFTQLEAENSILKDEKKALEDMLK 792
Cdd:PHA02562 357 vDKAKKVKAAIEELQAEFVDNAEELAKLQDELD 389
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1553-1712 |
3.49e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.57 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1553 EMFSKDKTFIVRQSIHDEISVSSMDASRQLMLnEEQLEDMRQELVRQYQEHQQATELLRQAHMRQMERQREDQEQLQEEI 1632
Cdd:pfam17380 384 QMERQQKNERVRQELEAARKVKILEEERQRKI-QQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQV 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1633 KRLNKQLAQRSSIDNENLVSERERVLLEEL--EALKQLSLAGREKLCCELRNSSTQTQNGNENQGE-AEEQTFKEKELDR 1709
Cdd:pfam17380 463 ERLRQQEEERKRKKLELEKEKRDRKRAEEQrrKILEKELEERKQAMIEEERKRKLLEKEMEERQKAiYEEERRREAEEER 542
|
...
gi 1622925510 1710 KPE 1712
Cdd:pfam17380 543 RKQ 545
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
323-568 |
3.95e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 323 EIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGtve 402
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR--- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 403 ELQKRNHKDSQFE--------TDIVQRMEqetqrkleqlraeldemYGQQIVQMKQELIRQHVSQMEELKTRHKGemena 474
Cdd:COG3883 94 ALYRSGGSVSYLDvllgsesfSDFLDRLS-----------------ALSKIADADADLLEELKADKAELEAKKAE----- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 475 lrsypnitvNEDQIKLMNVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQ 554
Cdd:COG3883 152 ---------LEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
250
....*....|....
gi 1622925510 555 ESKLNEAQKSLSTV 568
Cdd:COG3883 223 AAAAAAAAAAAAAA 236
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
503-654 |
4.01e-03 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 43.13 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 503 QDTNSQKeKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDlkaEIVSASESR 582
Cdd:pfam05911 678 LKTEENK-RLKEEFEQLKSEKENLEVELASCTENLESTKSQLQESEQLIAELRSELASLKESNSLAET---QLKCMAESY 753
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622925510 583 KELELKH---EAEVTNYKIKLEMLEKEknaVLDRMAESQEAELERLRTQL-LFSHEEELSKLKEDLEIEHQINIEK 654
Cdd:pfam05911 754 EDLETRLtelEAELNELRQKFEALEVE---LEEEKNCHEELEAKCLELQEqLERNEKKESSNCDADQEDKKLQQEK 826
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
2109-2372 |
4.05e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2109 QTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQALLVsadtfqkvedrkqfgaveakpels 2188
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA------------------------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2189 LEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKddmeklglAIK 2268
Cdd:COG4942 74 LEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLK--------YLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2269 ESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKitTDNKVIEEKNELIRDLETQIEclmSDQECVKRNRE 2348
Cdd:COG4942 146 PARREQAEELRADLAELAALRAELEAERAELEALLAELEEERA--ALEALKAERQKLLARLEKELA---ELAAELAELQQ 220
|
250 260
....*....|....*....|....
gi 1622925510 2349 EEiEQLNEVIEKLQQELANIGQKT 2372
Cdd:COG4942 221 EA-EELEALIARLEAEAAAAAERT 243
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
3068-3248 |
4.07e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3068 QRIQEQGVEYQAAMEYLQKADRrsllsEIQALHAQMNGRKITLKREQenekssQELLEYNIQQKQSQMLEMQVELSSMKD 3147
Cdd:COG4913 255 EPIRELAERYAAARERLAELEY-----LRAALRLWFAQRRLELLEAE------LEELRAELARLEAELERLEARLDALRE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3148 RATELQEQLSSEKMV-VAELRSELAQTKLELETTLKAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQWAL 3226
Cdd:COG4913 324 ELDELEAQIRGNGGDrLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEAL 403
|
170 180
....*....|....*....|..
gi 1622925510 3227 EKEKAKLGHSEERDKEELEDLK 3248
Cdd:COG4913 404 EEALAEAEAALRDLRRELRELE 425
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
703-846 |
4.10e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 43.09 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 703 KDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEkgTLEQEVQELQLKIELLEKQMKEKENDLQ---EKFTQLEAENSI 779
Cdd:pfam05667 304 EKLQFTNEAPAATSSPPTKVETEEELQQQREEELE--ELQEQLEDLESSIQELEKEIKKLESSIKqveEELEELKEQNEE 381
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 780 LKDEKKALEDMLKI-HTPDNQEERL--IFIDSIKSKSKDSV-WEKEIEILTEENEDLKQQCIQLNEEIEKQ 846
Cdd:pfam05667 382 LEKQYKVKKKTLDLlPDAEENIAKLqaLVDASAQRLVELAGqWEKHRVPLIEEYRALKEAKSNKEDESQRK 452
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
2181-2251 |
4.14e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 4.14e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 2181 VEAKPELsLEVQLQAERDaIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQ 2251
Cdd:PRK12704 60 LEAKEEI-HKLRNEFEKE-LRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEK 128
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1853-2252 |
4.53e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1853 QAAVEKLLEAISETSSQLEHAKVTQTELMRESfrqkqeatESLKCQEDLRERLHEESRAREQLAVELSKAEGVIDGYADE 1932
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEELREEL--------EKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1933 KTLfERQIQEKTDIIDRLEQEL-LCASNRLQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQQL--LQETEKLMKEKLE 2009
Cdd:COG4717 159 REL-EEELEELEAELAELQEELeELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELeeLEEELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2010 VQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFLDEQAIDREHERDVFQQ-E 2088
Cdd:COG4717 238 AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEElE 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2089 IQKLEQQLKVVPRFQPISEHQTREVEQLTNHLKEKTDKCSELllskeQLQRDIQERNEEIEKL--EFRVRELEQALLVSA 2166
Cdd:COG4717 318 EEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL-----EEELQLEELEQEIAALlaEAGVEDEEELRAALE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2167 DTFQKVEDRKQFGAVEAK-PELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLhmQLEIQKKESTTR 2245
Cdd:COG4717 393 QAEEYQELKEELEELEEQlEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAEL--EAELEQLEEDGE 470
|
....*..
gi 1622925510 2246 LQELEQE 2252
Cdd:COG4717 471 LAELLQE 477
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
2030-2333 |
4.58e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.19 E-value: 4.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2030 IDVEEQVSRFIELEQEKnaelmdLRQQNQALEKQLEKMRKfLDEQAIDREHERDvfQQEIQKLEQQLKVVPRFQPIS--- 2106
Cdd:pfam17380 284 VSERQQQEKFEKMEQER------LRQEKEEKAREVERRRK-LEEAEKARQAEMD--RQAAIYAEQERMAMERERELErir 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2107 -EHQTREVEQL-TNHLKEKTDKCSELllskEQLQRDIQERNEEI-EKLEF-RVRELEQALLVSADTFQKVEDRKQFGAVE 2182
Cdd:pfam17380 355 qEERKRELERIrQEEIAMEISRMREL----ERLQMERQQKNERVrQELEAaRKVKILEEERQRKIQQQKVEMEQIRAEQE 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2183 AKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEK 2262
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIE 510
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622925510 2263 LGLAIKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQLNEQIMKLQQQLKITTDNKVIEEKNELIRDLETQI 2333
Cdd:pfam17380 511 EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQI 581
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
190-400 |
4.69e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 4.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 190 LQQLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQ--------------------KLQIQFQQLQA-- 247
Cdd:PRK11281 65 LEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDeetretlstlslrqlesrlaQTLDQLQNAQNdl 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 248 ---------------------------SETLRNSTHSSTAA---------DLLQAKQ-----QIRTHQQQLEEQDHLLED 286
Cdd:PRK11281 145 aeynsqlvslqtqperaqaalyansqrLQQIRNLLKGGKVGgkalrpsqrVLLQAEQallnaQNDLQRKSLEGNTQLQDL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 287 YQKKKEDFTMQISFLQEKIKVY-EMEQDKKVENSNK-----EEIQEKETIIEelNTKIIEEEKKTLELKDKLTAADKLLG 360
Cdd:PRK11281 225 LQKQRDYLTARIQRLEHQLQLLqEAINSKRLTLSEKtvqeaQSQDEAARIQA--NPLVAQELEINLQLSQRLLKATEKLN 302
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1622925510 361 ELqeqvVQKNQEIKNMkleLTNSKQKERQSSEEIKQLMGT 400
Cdd:PRK11281 303 TL----TQQNLRVKNW---LDRLTQSERNIKEQISVLKGS 335
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
3068-3403 |
4.73e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.13 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3068 QRIQEQGVEYQAAMEYLQKADRRSLLSEIQALHAQmngrKITLKREQENEKSSQELLEYNIQQKQSQMLEMQVELSSMKD 3147
Cdd:TIGR02169 204 RREREKAERYQALLKEKREYEGYELLKEKEALERQ----KEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3148 RAtelqEQLSSEKMVvaELRSELAQTKLELETTLKAQHkhLKELEAFRLEVKDKTDEVHLlnDTLASEQKKSRELQWALE 3227
Cdd:TIGR02169 280 KI----KDLGEEEQL--RVKEKIGELEAEIASLERSIA--EKERELEDAEERLAKLEAEI--DKLLAEIEELEREIEEER 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3228 KEKAKLGHSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDaqlseehgrnlELQVLLESE 3307
Cdd:TIGR02169 350 KRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELD-----------RLQEELQRL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3308 KVRIREMSSTLDRERELHAQLQSNDGTGQSRPSlPSEDLLKELQKQL---EEKHSRIVELLNETEK------YKLDSLQT 3378
Cdd:TIGR02169 419 SEELADLNAAIAGIEAKINELEEEKEDKALEIK-KQEWKLEQLAADLskyEQELYDLKEEYDRVEKelsklqRELAEAEA 497
|
330 340
....*....|....*....|....*
gi 1622925510 3379 RQQMEKDRQVHRKTLQTEQEANTEG 3403
Cdd:TIGR02169 498 QARASEERVRGGRAVEEVLKASIQG 522
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
209-782 |
4.82e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.11 E-value: 4.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 209 QLTANLQQARREKDETMREFLELTEQSQKLQiqfqqlQASETLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDhlLEDYQ 288
Cdd:TIGR00606 574 QLEDWLHSKSKEINQTRDRLAKLNKELASLE------QNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESD--LERLK 645
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 289 KKKEDFTMQISFLQEKIKVYE--MEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQ- 365
Cdd:TIGR00606 646 EEIEKSSKQRAMLAGATAVYSqfITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRr 725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 366 ------VVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQK---------RNHKDSQFETDIVQRMEQET---Q 427
Cdd:TIGR00606 726 demlglAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETllgtimpeeESAKVCLTDVTIMERFQMELkdvE 805
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 428 RKLEQLRAELDEMYG-------QQIVQMKQELIRQHVSQMEELKTrhkgemenalrsypnitVNEDQiklmnvaiNELNI 500
Cdd:TIGR00606 806 RKIAQQAAKLQGSDLdrtvqqvNQEKQEKQHELDTVVSKIELNRK-----------------LIQDQ--------QEQIQ 860
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 501 KLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSlstvedlKAEIVSASE 580
Cdd:TIGR00606 861 HLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQE-------KEELISSKE 933
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 581 SRKElelKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEAELERlrtqllfsHEEELSKLKEDLEiEHQINIEKLKDNLG 660
Cdd:TIGR00606 934 TSNK---KAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQ--------KETELNTVNAQLE-ECEKHQEKINEDMR 1001
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 661 IhYKQQIDglqnemSQKIETMQFEKDNLITKQNQLILEISK-LKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKG 739
Cdd:TIGR00606 1002 L-MRQDID------TQKIQERWLQDNLTLRKRENELKEVEEeLKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLAL 1074
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 1622925510 740 TLEQEVQE--LQLKIELLEKQMKEKENDLQEKFTQLEAENSILKD 782
Cdd:TIGR00606 1075 GRQKGYEKeiKHFKKELREPQFRDAEEKYREMMIVMRTTELVNKD 1119
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
419-998 |
4.96e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.11 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 419 VQRMEQETQRKLEQLRAELDEMYGQQIVQMKQELiRQHVSQMEELKTRHKGEMENALRSYPN----ITVNE---DQIKLM 491
Cdd:PRK02224 178 VERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGL-ESELAELDEEIERYEEQREQARETRDEadevLEEHEerrEELETL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 492 NVAINELNIKLQDTNSQKEKLKEELGVILEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTV--- 568
Cdd:PRK02224 257 EAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECrva 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 569 -EDLKAEIVSASESRKELELKHEAevtnykiklemlEKEKNAVLDRMAESQEAELERLRTQL--LFSHEEELSKLKEDLE 645
Cdd:PRK02224 337 aQAHNEEAESLREDADDLEERAEE------------LREEAAELESELEEAREAVEDRREEIeeLEEEIEELRERFGDAP 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 646 IEHQiNIEKLKDNLgihyKQQIDGLQNEMSQKIETMQFEKDNLitKQNQLILEISKLKDLQQSLVNSkseemtlqinelq 725
Cdd:PRK02224 405 VDLG-NAEDFLEEL----REERDELREREAELEATLRTARERV--EEAEALLEAGKCPECGQPVEGS------------- 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 726 KEIEILRQEEKEKGTLEQEVQELQLKIELLEKQMKEKEnDLQEkftqLEAENSILKDEKKALEDMLKIHTPDNQEERLif 805
Cdd:PRK02224 465 PHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAE-DLVE----AEDRIERLEERREDLEELIAERRETIEEKRE-- 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 806 idsiKSKSKDsvweKEIEILTEENEDLKQQCIQLNEEIEKQRNTFsfaeKNFEVNYQELQEEYACLLKVKDDLEDSKNkq 885
Cdd:PRK02224 538 ----RAEELR----ERAAELEAEAEEKREAAAEAEEEAEEAREEV----AELNSKLAELKERIESLERIRTLLAAIAD-- 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 886 eleYKSKLKALNEEL-HLQRINpttvktkssvfDEDKTFVAETLEM-----GEVVEKDTTELMEKLEVTKREKLELSQRL 959
Cdd:PRK02224 604 ---AEDEIERLREKReALAELN-----------DERRERLAEKRERkreleAEFDEARIEEAREDKERAEEYLEQVEEKL 669
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1622925510 960 ADLSEQLKQKHGEISFLN---EEVKSLKQEKEQVLLRCRELE 998
Cdd:PRK02224 670 DELREERDDLQAEIGAVEnelEELEELRERREALENRVEALE 711
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
2086-2391 |
4.99e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 42.71 E-value: 4.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2086 QQEIQKLEQQLKVVPRFQPIsEHQTREVEQLTNHLKEKTDKCseLLLSKEQLQRDIQERNEEIEKL-EFRVRELEQALLV 2164
Cdd:pfam05667 219 AQEWEEEWNSQGLASRLTPE-EYRKRKRTKLLKRIAEQLRSA--ALAGTEATSGASRSAQDLAELLsSFSGSSTTDTGLT 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2165 SADTFQKVEDRkQFGAVEAKPELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHM---QLEIQKKE 2241
Cdd:pfam05667 296 KGSRFTHTEKL-QFTNEAPAATSSPPTKVETEEELQQQREEELEELQEQLEDLESSIQELEKEIKKLESsikQVEEELEE 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2242 STTRLQELEQENKLFK----------DDMEKLGLAIKEsdavSTQDQHVLFGKF--------------AQIIQEKEVEID 2297
Cdd:pfam05667 375 LKEQNEELEKQYKVKKktldllpdaeENIAKLQALVDA----SAQRLVELAGQWekhrvplieeyralKEAKSNKEDESQ 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2298 QLNEQIMKLQQQLKittdnKVIEE---KNELIRDLETQIECLMSDQecvkrNREEEIEQLNEV---IEKLQQELanigQK 2371
Cdd:pfam05667 451 RKLEEIKELREKIK-----EVAEEakqKEELYKQLVAEYERLPKDV-----SRSAYTRRILEIvknIKKQKEEI----TK 516
|
330 340
....*....|....*....|
gi 1622925510 2372 TLVDAHSLPEEADSLKHQLD 2391
Cdd:pfam05667 517 ILSDTKSLQKEINSLTGKLD 536
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
197-406 |
5.03e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 5.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 197 EAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQASETlrnsthsSTAADLLQAKQQIRTHQQQ 276
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEID-------KLQAEIAEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 277 LEEQdhlLEDYQKKK---------------EDFTMQISFLQekikvyemeqdkKVENSNKEEIQEKETIIEELNTKIIEE 341
Cdd:COG3883 88 LGER---ARALYRSGgsvsyldvllgsesfSDFLDRLSALS------------KIADADADLLEELKADKAELEAKKAEL 152
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 342 EKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVEELQK 406
Cdd:COG3883 153 EAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
261-407 |
5.33e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 5.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 261 ADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDkkvENSNKEEIQEKETIIEELNTKIIE 340
Cdd:COG1579 31 AELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLG---NVRNNKEYEALQKEIESLKRRISD 107
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622925510 341 EEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELtnsKQKERQSSEEIKQLMGTVEELQKR 407
Cdd:COG1579 108 LEDEILELMERIEELEEELAELEAELAELEAELEEKKAEL---DEELAELEAELEELEAEREELAAK 171
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
2079-2279 |
5.68e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 5.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2079 EHERDVFQQEIQKLEQQLKVVprfqpisehqTREVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNEEIEKLEFRVREL 2158
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAA----------QAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2159 EQAL-------------------LVSADTFQKV------------EDRKQFGAVEAkpelsLEVQLQAERDAIDRKEKEI 2207
Cdd:COG3883 85 REELgeraralyrsggsvsyldvLLGSESFSDFldrlsalskiadADADLLEELKA-----DKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622925510 2208 TNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAVSTQDQH 2279
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAA 231
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1994-2599 |
5.90e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.80 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 1994 QQLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNAELMDLRQQNQALEKQLEKMRKFL-- 2071
Cdd:pfam15921 116 QTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILvd 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2072 -DEQAIDREHERDVF-----------------------------------QQEIQKLEQQLKVVPRFQP--------ISE 2107
Cdd:pfam15921 196 fEEASGKKIYEHDSMstmhfrslgsaiskilreldteisylkgrifpvedQLEALKSESQNKIELLLQQhqdrieqlISE 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2108 HQTrEVEQLTNHLKEKTDKCSELLLSKEQLQRDIQERNE----EIEKLEFRVRELEQALLVSADTFQKVEDRKQFGAVEA 2183
Cdd:pfam15921 276 HEV-EITGLTEKASSARSQANSIQSQLEIIQEQARNQNSmymrQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLA 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2184 KPELS---------------LEVQLQAERDAIDRKEKEITNLEEQ--------------LEQFREELENKNEEVQQLHMQ 2234
Cdd:pfam15921 355 NSELTearterdqfsqesgnLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitIDHLRRELDDRNMEVQRLEAL 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2235 LEIQKKESTTRLQE-----------LEQENKL---FKDDMEKLGLAIKESDA--VSTQDQHVLFGKFAQIIQEKEVEIDQ 2298
Cdd:pfam15921 435 LKAMKSECQGQMERqmaaiqgknesLEKVSSLtaqLESTKEMLRKVVEELTAkkMTLESSERTVSDLTASLQEKERAIEA 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2299 LNEQIMKLQQQLKITTDN-KVIEEKNELIRDLETQIECLmsdqecvkrnrEEEIEQLNEVIEKLQQELANIGQktLVDAH 2377
Cdd:pfam15921 515 TNAEITKLRSRVDLKLQElQHLKNEGDHLRNVQTECEAL-----------KLQMAEKDKVIEILRQQIENMTQ--LVGQH 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2378 SLPEEAdslkhqldmVIAEKLALEQQVETTNEEMTFTKNILKETNFKMNQLTQELFSLKreresMEKIQSIPGKSVNM-A 2456
Cdd:pfam15921 582 GRTAGA---------MQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLE-----LEKVKLVNAGSERLrA 647
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2457 IDDMSKDKPEL--EVVLTEDALKSLENQtyLKSFEENGKGSIINLETRLLQLESTVRAKDLELTQCYKQIKDMQEQGQSE 2534
Cdd:pfam15921 648 VKDIKQERDQLlnEVKTSRNELNSLSED--YEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHA 725
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622925510 2535 IEVlqkkILNLQKILEEKVAaalvsqiQLEAVQEYAKFCQDNQTISSEPERTNIQNLNQLREDES 2599
Cdd:pfam15921 726 MKV----AMGMQKQITAKRG-------QIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELS 779
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
2186-2408 |
6.05e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2186 ELSLEVQLQAERDAIDRKEKEITNLEEQLEQFREEL-------------ENKNEEVQQLhMQLEIQKKESTTRLQELEQE 2252
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAALeefrqknglvdlsEEAKLLLQQL-SELESQLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2253 NKLFKDDMEklglaiKESDAVSTQDQHVLFGKFAQIIQEKEVEIDQL-------NEQIMKLQQQLKiTTDNKVIEEKNEL 2325
Cdd:COG3206 242 LAALRAQLG------SGPDALPELLQSPVIQQLRAQLAELEAELAELsarytpnHPDVIALRAQIA-ALRAQLQQEAQRI 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2326 IRDLETQIECLmsdqecvkrnrEEEIEQLNEVIEKLQQELANIGQKtLVDAHSLPEEADSLKHQLDMVIA--EKLALEQQ 2403
Cdd:COG3206 315 LASLEAELEAL-----------QAREASLQAQLAQLEARLAELPEL-EAELRRLEREVEVARELYESLLQrlEEARLAEA 382
|
....*
gi 1622925510 2404 VETTN 2408
Cdd:COG3206 383 LTVGN 387
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
597-847 |
6.08e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.61 E-value: 6.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 597 KIKLEMLEKEKNAVLDRMAESQEAELERL-------RTQLLFSH----EEELSKLKEDLEIEHQINIEKLK------DNL 659
Cdd:PRK05771 8 KVLIVTLKSYKDEVLEALHELGVVHIEDLkeelsneRLRKLRSLltklSEALDKLRSYLPKLNPLREEKKKvsvkslEEL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 660 GIHYKQQIDGLQNEMSQKIETMQfEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQI-NELQKEIEILRQEEKEK 738
Cdd:PRK05771 88 IKDVEEELEKIEKEIKELEEEIS-ELENEIKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFvGTVPEDKLEELKLESDV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 739 GTLEqEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIhtpdnqEERLIFIDSIKSKSKdsvw 818
Cdd:PRK05771 167 ENVE-YISTDKGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEGTPSELIREI------KEELEEIEKERESLL---- 235
|
250 260
....*....|....*....|....*....
gi 1622925510 819 eKEIEILTEENEDLKQQCIQLNeEIEKQR 847
Cdd:PRK05771 236 -EELKELAKKYLEELLALYEYL-EIELER 262
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
596-762 |
6.51e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 6.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 596 YKIKLEMLEKEKNAVLDRMAESQEAELERLRTQLLFSHEEELSKLKEDLEIEHQINIEKLKDnlgihykqqidgLQNEMS 675
Cdd:PRK12704 25 RKKIAEAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQK------------LEKRLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 676 QKIETMQFEKDNLITKQNQLILEISKLKDLQQSLvNSKSEEMTLQINELQKEIEI---LRQEEKEKGTLEQEVQELQLKI 752
Cdd:PRK12704 93 QKEENLDRKLELLEKREEELEKKEKELEQKQQEL-EKKEEELEELIEEQLQELERisgLTAEEAKEILLEKVEEEARHEA 171
|
170
....*....|
gi 1622925510 753 ELLEKQMKEK 762
Cdd:PRK12704 172 AVLIKEIEEE 181
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
170-587 |
6.80e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.73 E-value: 6.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 170 EIEELNRELEEMRVTYGTEglqqLQEFEAAIKQRDGIITQLTANLQQARREKDETMREFLELTEQSQKLQIQFQQLQaSE 249
Cdd:TIGR00606 692 ELQEFISDLQSKLRLAPDK----LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLK-ND 766
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 250 TLRNSTHSSTAADLLQAKQQIRTHQQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEMEQDKKVENSN----KEEIQ 325
Cdd:TIGR00606 767 IEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHEldtvVSKIE 846
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 326 EKETIIEELNTKIIEEEKKTLELKD---KLTAADKLLGELQEQVVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVE 402
Cdd:TIGR00606 847 LNRKLIQDQQEQIQHLKSKTNELKSeklQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKE 926
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 403 ELQKRNHKDSQFETDIVQRMEQETQRKLEQLRAELDEMYGQQIVQMKQEL--IRQHVSQMEELKTRHKGEMENALRSYPN 480
Cdd:TIGR00606 927 ELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKEteLNTVNAQLEECEKHQEKINEDMRLMRQD 1006
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 481 ITVNEDQIKLM--NVAINELNIKLQDTNSQKEKLKEELGV--ILEEKCALQRQLEDL-----FEELSFSREQIQRARQTI 551
Cdd:TIGR00606 1007 IDTQKIQERWLqdNLTLRKRENELKEVEEELKQHLKEMGQmqVLQMKQEHQKLEENIdlikrNHVLALGRQKGYEKEIKH 1086
|
410 420 430
....*....|....*....|....*....|....*.
gi 1622925510 552 AEQESKLNEAQKSLSTVEDLKAEIVSASESRKELEL 587
Cdd:TIGR00606 1087 FKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDI 1122
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
3027-3309 |
7.22e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 7.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3027 ELLLALQQVFLEERSVLLAAFRTELTALgtTDAVGLLNCLEQRIQEQGVEyqaameylQKADRRSLLSEIQALHAQMNGR 3106
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISA--------LRKDLARLEAEVEQLEERIAQL 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3107 KITLKREQENEKSSQELLEyniqQKQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAELRSELAQTKLELETTLKAQHK 3186
Cdd:TIGR02168 753 SKELTELEAEIEELEERLE----EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLES 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3187 HLKELEAFRLEV-------KDKTDEVHLLNDTLASEQKKSRELQWALEKEKAKLGHSEER------DKEELEDLKFSLES 3253
Cdd:TIGR02168 829 LERRIAATERRLedleeqiEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAlallrsELEELSEELRELES 908
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622925510 3254 QKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQLSEEHGRNLELQVLLESEKV 3309
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIE 964
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
2971-3423 |
7.28e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.62 E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2971 EDHSIQQISESWLEERKAYLSTISSLQDLITKMQLQREAEVYDSSQSHESFSDWRGELLLALQQVFLEERSvlLAAFRTE 3050
Cdd:COG1196 324 ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA--AAELAAQ 401
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3051 LTALGTTDAvGLLNCLEQRIQEQGVEYQAAMEYLQKADR-RSLLSEIQALHAQMNGRKITLKREQENEKSSQELLEYNIQ 3129
Cdd:COG1196 402 LEELEEAEE-ALLERLERLEEELEELEEALAELEEEEEEeEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3130 QKQSQMLEMQVELSSMKDRATELQEQLSSEKM------------VVAELRSELAQTKLELETTLKAQHKHL------KEL 3191
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGFLEGVKAalllaglrglagAVAVLIGVEAAYEAALEAALAAALQNIvveddeVAA 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3192 EAFRLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAKLGHSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQL 3271
Cdd:COG1196 561 AAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAV 640
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3272 LDESQQKIESQRM--LYDAQLSEEHGRNLELQVLLESEKVRIREMSSTLDRERELHAQlqsndgtgqsrpslpsEDLLKE 3349
Cdd:COG1196 641 TLAGRLREVTLEGegGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEA----------------LLAEEE 704
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622925510 3350 LQKQLEEKHSRIVELLNETEKYKLDSLQTRQQMEKDRQVHRKTLQTEQEANTEGQKKMHELQSKVEDLQRQLEE 3423
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
285-899 |
7.60e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 42.51 E-value: 7.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 285 EDYQKKK---EDFTMQISFLQEKIKVYEMEqDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTAADKLLGE 361
Cdd:PTZ00440 1123 EHYNKKKkslEKIYKQMEKTLKELENMNLE-DITLNEVNEIEIEYERILIDHIVEQINNEAKKSKTIMEEIESYKKDIDQ 1201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 362 LQEQVVQKNQEIKNmKLELTNSKQKERQSSEEIKQLmgTVEELQKRNHKDSQFETDIVQRMEQET----------QRKLE 431
Cdd:PTZ00440 1202 VKKNMSKERNDHLT-TFEYNAYYDKATASYENIEEL--TTEAKGLKGEANRSTNVDELKEIKLQVfsylqqvikeNNKME 1278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 432 QLRAELDEMYGQQIVQMKQEL---IRQHVSQMEELKTRHKGEMENALRSYPNItvnEDQIKLMNVAINELNIKLQ----D 504
Cdd:PTZ00440 1279 NALHEIKNMYEFLISIDSEKIlkeILNSTKKAEEFSNDAKKELEKTDNLIKQV---EAKIEQAKEHKNKIYGSLEdkqiD 1355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 505 TNSQK-EKLKEElgvILEEKCALQRQLEDLFEELSFSREQIQRARQTIAE---------------QESKLNEAQKSLSTV 568
Cdd:PTZ00440 1356 DEIKKiEQIKEE---ISNKRKEINKYLSNIKSNKEKCDLHVRNASRGKDKidflnkheaiepsnsKEVNIIKITDNINKC 1432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 569 EDLKAEIVSAS---ESRKELELKHEAEVTN---------YKIKLEMLEKEKNAVLDRMaesqEAELERLRTQLLFShEEE 636
Cdd:PTZ00440 1433 KQYSNEAMETEnkaDENNDSIIKYEKEITNilnnssilgKKTKLEKKKKEATNIMDDI----NGEHSIIKTKLTKS-SEK 1507
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 637 LSKLKEdleiehQINIEKLKDNLgihykqqidglqNEMSQKIETMQFEKDNLITKQNqlILEISKLKDLQQSLVNSKSEE 716
Cdd:PTZ00440 1508 LNQLNE------QPNIKREGDVL------------NNDKSTIAYETIQYNLGRVKHN--LLNILNIKDEIETILNKAQDL 1567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 717 M--TLQINELQKEIEILRQEEKekgtlEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALEDMLKIH 794
Cdd:PTZ00440 1568 MrdISKISKIVENKNLENLNDK-----EADYVKYLDNILKEKQLMEAEYKKLNEIYSDVDNIEKELKKHKKNYEIGLLEK 1642
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 795 TPDNQEERLIFIDSIKSKSKDSVwekEIEILTEENEDLKQQCIqlNEEIEKQRNTFSFAEKNFEVNYQELQEEYACLLKV 874
Cdd:PTZ00440 1643 VIEINKNIKLYMDSTKESLNSLV---NNFSSLFNNFYLNKYNI--NENLEKYKKKLNEIYNEFMESYNIIQEKMKEVSND 1717
|
650 660
....*....|....*....|....*
gi 1622925510 875 KDDLEDSKNKQELEYKSKLKALNEE 899
Cdd:PTZ00440 1718 DVDYNEAKTLREEAQKEEVNLNNKE 1742
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
494-880 |
7.86e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 7.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 494 AINELNIKLQDTNSQKEKLKEELGVI--LEEKCALQRQLEDLFEELSFSREQIQRARQTIAEQESKLNEAQKSLSTVEDL 571
Cdd:COG4717 96 ELEELEEELEELEAELEELREELEKLekLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAEL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 572 KAEIVSAsesRKELELKHEAEVTNYKIKLEMLEKEKNAVLDRMAESQEaELERLRTQLlfsheEELSKLKEDLEIEHQIN 651
Cdd:COG4717 176 QEELEEL---LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQE-ELEELEEEL-----EQLENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 652 IEK--LKDNLGIHYKQQIDGLQNEMSQKI--------------ETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSE 715
Cdd:COG4717 247 EARllLLIAAALLALLGLGGSLLSLILTIagvlflvlgllallFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 716 EMTLQINELQKEIEILRQEEKEKGTLEQEVQEL--QLKIELLEKQMK--------EKENDLQEKFTQLEAENSiLKDEKK 785
Cdd:COG4717 327 ALGLPPDLSPEELLELLDRIEELQELLREAEELeeELQLEELEQEIAallaeagvEDEEELRAALEQAEEYQE-LKEELE 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 786 ALEDMLKIHTPDNQEERLIFidsiksksKDSVWEKEIEILTEENEDLKQQCIQLNEEIEKQRNTFSFAEKNFEvnYQELQ 865
Cdd:COG4717 406 ELEEQLEELLGELEELLEAL--------DEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGE--LAELL 475
|
410
....*....|....*
gi 1622925510 866 EEYACLLKVKDDLED 880
Cdd:COG4717 476 QELEELKAELRELAE 490
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
3215-3447 |
8.07e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3215 EQKKSRELQWALEKEKAKLGHSEERDKE-----ELEDLKFSLESQKQRNLQLNLLLEQQKQLLDESQQKIESQRMLYDAQ 3289
Cdd:pfam17380 305 KEEKAREVERRRKLEEAEKARQAEMDRQaaiyaEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQ 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3290 LSEEHGRNLELQVLLESEKVRIREMsstlDRERELHAQLQSNDGTGQSRpslpsEDLLKELQKQLEEKHSRivellnETE 3369
Cdd:pfam17380 385 MERQQKNERVRQELEAARKVKILEE----ERQRKIQQQKVEMEQIRAEQ-----EEARQREVRRLEEERAR------EME 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 3370 KYKLDSLQTRQQMEKDRQ--VHRKTLQTEQEANTEGQKKMHELQSKVedLQRQLEEKRQQVYKLDLEGQRLQGIMQEFQK 3447
Cdd:pfam17380 450 RVRLEEQERQQQVERLRQqeEERKRKKLELEKEKRDRKRAEEQRRKI--LEKELEERKQAMIEEERKRKLLEKEMEERQK 527
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
2021-2403 |
8.61e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.12 E-value: 8.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2021 LQKQVKALEIDVEEQVSrfieLEQEKNAELMDLRQQNQALEKQLEKMRKFLDEqaidREHERDVFQQEIQKLEQQLK--- 2097
Cdd:pfam10174 343 LQTEVDALRLRLEEKES----FLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDV----KERKINVLQKKIENLQEQLRdkd 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2098 --------VVPRFQPISEHQTREVEQLTNHLKEKtDKCSELLlsKEQLQRDIQERNEEIEKLEFRVRELEQALlvsaDTF 2169
Cdd:pfam10174 415 kqlaglkeRVKSLQTDSSNTDTALTTLEEALSEK-ERIIERL--KEQREREDRERLEELESLKKENKDLKEKV----SAL 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2170 QKVEDRKQFGAVEAKPELSlevqlqAERDAIDRKEKEITNLEEQLEQFREE---LENKNEEVQQLHMQLEIqKKESTTRL 2246
Cdd:pfam10174 488 QPELTEKESSLIDLKEHAS------SLASSGLKKDSKLKSLEIAVEQKKEEcskLENQLKKAHNAEEAVRT-NPEINDRI 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2247 QELEQENKLFKDDMEKlglaikesdavSTQDQHVLFGKFAQIIQEK---EVEIDQLNEQIMKLQQQLKITTDNKVIEEKN 2323
Cdd:pfam10174 561 RLLEQEVARYKEESGK-----------AQAEVERLLGILREVENEKndkDKKIAELESLTLRQMKEQNKKVANIKHGQQE 629
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 2324 ELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEKLQQELANIGQKTLVDAHSLPEEA---DSLKHQLDMVIAEKLAL 2400
Cdd:pfam10174 630 MKKKGAQLLEEARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDghlTNLRAERRKQLEEILEM 709
|
...
gi 1622925510 2401 EQQ 2403
Cdd:pfam10174 710 KQE 712
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
311-432 |
8.75e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.12 E-value: 8.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622925510 311 EQDKKVENSNKEEIqekETIIEELNTKIIEEEKKTLELKDKLTAADKLLGELQEQVVQKNQEIKNMKLELtnskqkERQS 390
Cdd:PRK00409 505 EEAKKLIGEDKEKL---NELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEA------EKEA 575
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1622925510 391 SEEIKQLMGTVEELQKRNHKDSQFETDIVQRME-QETQRKLEQ 432
Cdd:PRK00409 576 QQAIKEAKKEADEIIKELRQLQKGGYASVKAHElIEARKRLNK 618
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
715-788 |
9.88e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.69 E-value: 9.88e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622925510 715 EEMTLQINELQKEIEILRQEE--KEKGTLEQEVQELQLKIELLEKQMKEKENDLQEKFTQLEAENSILKDEKKALE 788
Cdd:PRK12704 45 EEAKKEAEAIKKEALLEAKEEihKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELE 120
|
|
| |
