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Conserved domains on  [gi|1622871612|ref|XP_028690796|]
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uncharacterized protein C9orf43 homolog isoform X2 [Macaca mulatta]

Protein Classification

DUF4647 domain-containing protein( domain architecture ID 10634625)

DUF4647 domain-containing protein similar to Homo sapiens protein C9orf43

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4647 pfam15504
Domain of unknown function (DUF4647); This family of proteins is found in eukaryotes. Proteins ...
1-452 0e+00

Domain of unknown function (DUF4647); This family of proteins is found in eukaryotes. Proteins in this family are typically between 282 and 480 amino acids in length.


:

Pssm-ID: 464752  Cd Length: 467  Bit Score: 724.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612   1 MDLPDESQWDETTCGFAVCQHPQCWATVRRIERGHPRILGSTCKTPLDAEDKLPVLTVVNISDSCFAP-----RHLPECT 75
Cdd:pfam15504   1 MDLPDESQWDETTCTLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDTEDKLPVLTIVNISDSCFWAkrrahRHLSGFT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612  76 VTKARSLLSRSSKFYSKFHGRPPKGLPDKSLINCTNRLPKLPVLNLNETQLPCPEDVRNMVVLWIPEETEIH-------- 147
Cdd:pfam15504  81 FTKAHSLLSRGSKFDSKFQGRPQKGLPDKDLISSTNRPPKLSVLNLNETKLPCPQDVRNMVVIWIPEEPEKHvaeekpdv 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 148 GRQHGKKKRKNLTVKSKSFLGLSGNQSAETRVETPGMTVPPPTPVQLSKQFSSDFLPLWAQSEALPQDLLKELLPDRKQT 227
Cdd:pfam15504 161 TSQDGKKKRKKSTVKSKSSLGLSGKQYRETQLRSPGMIVPPPSPVHLLEQLSSESIPLWAQFDMLPQDLLKDLLLDEGKT 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 228 MPCLEMKIKLAMMKKNLPLERNRPDSAISSKMFLSIHRLTLERPALRYPERLKKL-HNLKTEGYRKQQQWQQQQQQRKVK 306
Cdd:pfam15504 241 MPCPEMKIQLAMMKKSLPLEKSRPDSAISSKMFLSVHRLTLQRPSLRYPEHLKKLrHNLKTEGLRKQQQWQQQQQQRKVK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 307 TPIKKQEAKKKAKSDPGSQSTSHKHPVTTVHDPLyGYRTLPGQNSDMKQQQQM-EKGTTSKQDSTERPKMDYCDH-VDFH 384
Cdd:pfam15504 321 TPTKKQEAKKKAKSDPGSQYTSRKHSGHIFHDPV-GLRTLRGQESDKKQQQEGkEKGPTLKQVSTERPQMDYAEKyLDYY 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622871612 385 HNVKSPELYETEPTNKDISAPVEAVLKAQAARQKKISFNFSEIMVRTGWNSELKLLRILQETDDEDEE 452
Cdd:pfam15504 400 HSPESPELYETESTYKDISTQVEAVLESQASSREETPKNLSASMDGISWNPELKLLRILQATDDEDEE 467
 
Name Accession Description Interval E-value
DUF4647 pfam15504
Domain of unknown function (DUF4647); This family of proteins is found in eukaryotes. Proteins ...
1-452 0e+00

Domain of unknown function (DUF4647); This family of proteins is found in eukaryotes. Proteins in this family are typically between 282 and 480 amino acids in length.


Pssm-ID: 464752  Cd Length: 467  Bit Score: 724.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612   1 MDLPDESQWDETTCGFAVCQHPQCWATVRRIERGHPRILGSTCKTPLDAEDKLPVLTVVNISDSCFAP-----RHLPECT 75
Cdd:pfam15504   1 MDLPDESQWDETTCTLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDTEDKLPVLTIVNISDSCFWAkrrahRHLSGFT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612  76 VTKARSLLSRSSKFYSKFHGRPPKGLPDKSLINCTNRLPKLPVLNLNETQLPCPEDVRNMVVLWIPEETEIH-------- 147
Cdd:pfam15504  81 FTKAHSLLSRGSKFDSKFQGRPQKGLPDKDLISSTNRPPKLSVLNLNETKLPCPQDVRNMVVIWIPEEPEKHvaeekpdv 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 148 GRQHGKKKRKNLTVKSKSFLGLSGNQSAETRVETPGMTVPPPTPVQLSKQFSSDFLPLWAQSEALPQDLLKELLPDRKQT 227
Cdd:pfam15504 161 TSQDGKKKRKKSTVKSKSSLGLSGKQYRETQLRSPGMIVPPPSPVHLLEQLSSESIPLWAQFDMLPQDLLKDLLLDEGKT 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 228 MPCLEMKIKLAMMKKNLPLERNRPDSAISSKMFLSIHRLTLERPALRYPERLKKL-HNLKTEGYRKQQQWQQQQQQRKVK 306
Cdd:pfam15504 241 MPCPEMKIQLAMMKKSLPLEKSRPDSAISSKMFLSVHRLTLQRPSLRYPEHLKKLrHNLKTEGLRKQQQWQQQQQQRKVK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 307 TPIKKQEAKKKAKSDPGSQSTSHKHPVTTVHDPLyGYRTLPGQNSDMKQQQQM-EKGTTSKQDSTERPKMDYCDH-VDFH 384
Cdd:pfam15504 321 TPTKKQEAKKKAKSDPGSQYTSRKHSGHIFHDPV-GLRTLRGQESDKKQQQEGkEKGPTLKQVSTERPQMDYAEKyLDYY 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622871612 385 HNVKSPELYETEPTNKDISAPVEAVLKAQAARQKKISFNFSEIMVRTGWNSELKLLRILQETDDEDEE 452
Cdd:pfam15504 400 HSPESPELYETESTYKDISTQVEAVLESQASSREETPKNLSASMDGISWNPELKLLRILQATDDEDEE 467
 
Name Accession Description Interval E-value
DUF4647 pfam15504
Domain of unknown function (DUF4647); This family of proteins is found in eukaryotes. Proteins ...
1-452 0e+00

Domain of unknown function (DUF4647); This family of proteins is found in eukaryotes. Proteins in this family are typically between 282 and 480 amino acids in length.


Pssm-ID: 464752  Cd Length: 467  Bit Score: 724.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612   1 MDLPDESQWDETTCGFAVCQHPQCWATVRRIERGHPRILGSTCKTPLDAEDKLPVLTVVNISDSCFAP-----RHLPECT 75
Cdd:pfam15504   1 MDLPDESQWDETTCTLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDTEDKLPVLTIVNISDSCFWAkrrahRHLSGFT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612  76 VTKARSLLSRSSKFYSKFHGRPPKGLPDKSLINCTNRLPKLPVLNLNETQLPCPEDVRNMVVLWIPEETEIH-------- 147
Cdd:pfam15504  81 FTKAHSLLSRGSKFDSKFQGRPQKGLPDKDLISSTNRPPKLSVLNLNETKLPCPQDVRNMVVIWIPEEPEKHvaeekpdv 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 148 GRQHGKKKRKNLTVKSKSFLGLSGNQSAETRVETPGMTVPPPTPVQLSKQFSSDFLPLWAQSEALPQDLLKELLPDRKQT 227
Cdd:pfam15504 161 TSQDGKKKRKKSTVKSKSSLGLSGKQYRETQLRSPGMIVPPPSPVHLLEQLSSESIPLWAQFDMLPQDLLKDLLLDEGKT 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 228 MPCLEMKIKLAMMKKNLPLERNRPDSAISSKMFLSIHRLTLERPALRYPERLKKL-HNLKTEGYRKQQQWQQQQQQRKVK 306
Cdd:pfam15504 241 MPCPEMKIQLAMMKKSLPLEKSRPDSAISSKMFLSVHRLTLQRPSLRYPEHLKKLrHNLKTEGLRKQQQWQQQQQQRKVK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622871612 307 TPIKKQEAKKKAKSDPGSQSTSHKHPVTTVHDPLyGYRTLPGQNSDMKQQQQM-EKGTTSKQDSTERPKMDYCDH-VDFH 384
Cdd:pfam15504 321 TPTKKQEAKKKAKSDPGSQYTSRKHSGHIFHDPV-GLRTLRGQESDKKQQQEGkEKGPTLKQVSTERPQMDYAEKyLDYY 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622871612 385 HNVKSPELYETEPTNKDISAPVEAVLKAQAARQKKISFNFSEIMVRTGWNSELKLLRILQETDDEDEE 452
Cdd:pfam15504 400 HSPESPELYETESTYKDISTQVEAVLESQASSREETPKNLSASMDGISWNPELKLLRILQATDDEDEE 467
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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