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Conserved domains on  [gi|1622861965|ref|XP_028688973|]
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uncharacterized protein C11orf24 homolog isoform X1 [Macaca mulatta]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5585 super family cl39316
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 76-453 3.26e-94

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


The actual alignment was detected with superfamily member pfam17823:

Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 293.40  E-value: 3.26e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  76 NFVPNKMWNGLVKRNASVETV---DNKTSED----ITMAATSPVTLTKGTSAAHLNSTEVTTEDTSR-TDVSEPATSGGA 147
Cdd:pfam17823  27 HFVLNKMWNGAGKQNASGDAVpraDNKSSEQ*nfcAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHgTDLSEPATREGA 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 148 ADGAAS--------------------------------------------------------NAPTTAASSTTAASSAPT 171
Cdd:pfam17823 107 ADGAASralaaaassspssaaqslpaaiaalpseafsapraaacranasaapraaiaaasapHAASPAPRTAASSTTAAS 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 172 TAASSAPTTLAPTTPTSTRWTP------SITATGHPSLSTALAQMPNSSMVPRT----------ATPATLATHAQTVATT 235
Cdd:pfam17823 187 STTAASSAPTTAASSAPATLTPargistAATATGHPAAGTALAAVGNSSPAAGTvtaavgtvtpAALATLAAAAGTVASA 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 236 T---NTSSPMSTRRSPSKHMPGDTTA-SPAAPTRPQAQGPISQVSVDQPVVNTT------------------PEPTPTLT 293
Cdd:pfam17823 267 AgtiNMGDPHARRLSPAKHMPSDTMArNPAAPMGAQAQGPIIQVSTDQPVHNTAgeptpspsnttlepntpkSVASTNLA 346

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 294 VVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPK 373
Cdd:pfam17823 347 VVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPK 426

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 374 MLATESCQPSTQGQYLVVTTAPLTQAVVDKTILLVVLLLGVTLFITVLVLFALQAYESYKKKDYTQVDYLINGMYADSEM 453
Cdd:pfam17823 427 TLAMASCQLSTQGQYLVVTTDPLTPALVDKMFLLVVLILGMTLFIAVLMLFALQAYESYKKKDYTQVDYLINEMYADSEM 506
 
Name Accession Description Interval E-value
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 76-453 3.26e-94

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 293.40  E-value: 3.26e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  76 NFVPNKMWNGLVKRNASVETV---DNKTSED----ITMAATSPVTLTKGTSAAHLNSTEVTTEDTSR-TDVSEPATSGGA 147
Cdd:pfam17823  27 HFVLNKMWNGAGKQNASGDAVpraDNKSSEQ*nfcAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHgTDLSEPATREGA 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 148 ADGAAS--------------------------------------------------------NAPTTAASSTTAASSAPT 171
Cdd:pfam17823 107 ADGAASralaaaassspssaaqslpaaiaalpseafsapraaacranasaapraaiaaasapHAASPAPRTAASSTTAAS 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 172 TAASSAPTTLAPTTPTSTRWTP------SITATGHPSLSTALAQMPNSSMVPRT----------ATPATLATHAQTVATT 235
Cdd:pfam17823 187 STTAASSAPTTAASSAPATLTPargistAATATGHPAAGTALAAVGNSSPAAGTvtaavgtvtpAALATLAAAAGTVASA 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 236 T---NTSSPMSTRRSPSKHMPGDTTA-SPAAPTRPQAQGPISQVSVDQPVVNTT------------------PEPTPTLT 293
Cdd:pfam17823 267 AgtiNMGDPHARRLSPAKHMPSDTMArNPAAPMGAQAQGPIIQVSTDQPVHNTAgeptpspsnttlepntpkSVASTNLA 346

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 294 VVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPK 373
Cdd:pfam17823 347 VVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPK 426

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 374 MLATESCQPSTQGQYLVVTTAPLTQAVVDKTILLVVLLLGVTLFITVLVLFALQAYESYKKKDYTQVDYLINGMYADSEM 453
Cdd:pfam17823 427 TLAMASCQLSTQGQYLVVTTDPLTPALVDKMFLLVVLILGMTLFIAVLMLFALQAYESYKKKDYTQVDYLINEMYADSEM 506
PHA03247 PHA03247
large tegument protein UL36; Provisional
 36-386 3.12e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.86  E-value: 3.12e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965   36 HVAFTPCKARPHPATqCQARSSPRRKMAQAGSMPLAAAsgnfvPNKMWNGLVKRNASVETVD-------NKTSEDITMAA 108
Cdd:PHA03247  2642 PPPTVPPPERPRDDP-APGRVSRPRRARRLGRAAQASS-----PPQRPRRRAARPTVGSLTSladppppPPTPEPAPHAL 2715

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  109 TSPVTLTKGTSAAHLNSTEVTTEDTSRTDVSEPATSGGAADGAASNAPTTAASSTTAASSAPTTAASSAPTTLAPTTPTs 188
Cdd:PHA03247  2716 VSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES- 2794

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  189 trwTPSITATGHPSLSTALAQMPNSSmVPRTATPATL----ATHAQTVATTTNTSSPMST-------------RRSPSKH 251
Cdd:PHA03247  2795 ---RESLPSPWDPADPPAAVLAPAAA-LPPAASPAGPlpppTSAQPTAPPPPPGPPPPSLplggsvapggdvrRRPPSRS 2870

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  252 MPGDTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPT-ASPVPVPHTSPIPEVEAtSPTTQP 330
Cdd:PHA03247  2871 PAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPpPQPQPPPPPPPRPQPPL-APTTDP 2949

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622861965  331 SPtpytqraAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPKMLATESCQPSTQG 386
Cdd:PHA03247  2950 AG-------AGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTG 2998
ZipA COG3115
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 255-355 6.61e-03

Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442349 [Multi-domain]  Cd Length: 298  Bit Score: 38.52  E-value: 6.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 255 DTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTP 334
Cdd:COG3115    61 PERVEPEASFDAEDEVREPDQEEVDPLLDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGESAEQEDAPAEEP 140

                          90       100
                  ....*....|....*....|.
gi 1622861965 335 YTQRAAGPGTPQAPEQAATEV 355
Cdd:COG3115   141 EAEAPAEEALAAELCAEPEEV 161
 
Name Accession Description Interval E-value
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 76-453 3.26e-94

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 293.40  E-value: 3.26e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  76 NFVPNKMWNGLVKRNASVETV---DNKTSED----ITMAATSPVTLTKGTSAAHLNSTEVTTEDTSR-TDVSEPATSGGA 147
Cdd:pfam17823  27 HFVLNKMWNGAGKQNASGDAVpraDNKSSEQ*nfcAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHgTDLSEPATREGA 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 148 ADGAAS--------------------------------------------------------NAPTTAASSTTAASSAPT 171
Cdd:pfam17823 107 ADGAASralaaaassspssaaqslpaaiaalpseafsapraaacranasaapraaiaaasapHAASPAPRTAASSTTAAS 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 172 TAASSAPTTLAPTTPTSTRWTP------SITATGHPSLSTALAQMPNSSMVPRT----------ATPATLATHAQTVATT 235
Cdd:pfam17823 187 STTAASSAPTTAASSAPATLTPargistAATATGHPAAGTALAAVGNSSPAAGTvtaavgtvtpAALATLAAAAGTVASA 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 236 T---NTSSPMSTRRSPSKHMPGDTTA-SPAAPTRPQAQGPISQVSVDQPVVNTT------------------PEPTPTLT 293
Cdd:pfam17823 267 AgtiNMGDPHARRLSPAKHMPSDTMArNPAAPMGAQAQGPIIQVSTDQPVHNTAgeptpspsnttlepntpkSVASTNLA 346

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 294 VVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPK 373
Cdd:pfam17823 347 VVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPK 426

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 374 MLATESCQPSTQGQYLVVTTAPLTQAVVDKTILLVVLLLGVTLFITVLVLFALQAYESYKKKDYTQVDYLINGMYADSEM 453
Cdd:pfam17823 427 TLAMASCQLSTQGQYLVVTTDPLTPALVDKMFLLVVLILGMTLFIAVLMLFALQAYESYKKKDYTQVDYLINEMYADSEM 506
PHA03247 PHA03247
large tegument protein UL36; Provisional
 36-386 3.12e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.86  E-value: 3.12e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965   36 HVAFTPCKARPHPATqCQARSSPRRKMAQAGSMPLAAAsgnfvPNKMWNGLVKRNASVETVD-------NKTSEDITMAA 108
Cdd:PHA03247  2642 PPPTVPPPERPRDDP-APGRVSRPRRARRLGRAAQASS-----PPQRPRRRAARPTVGSLTSladppppPPTPEPAPHAL 2715

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  109 TSPVTLTKGTSAAHLNSTEVTTEDTSRTDVSEPATSGGAADGAASNAPTTAASSTTAASSAPTTAASSAPTTLAPTTPTs 188
Cdd:PHA03247  2716 VSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES- 2794

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  189 trwTPSITATGHPSLSTALAQMPNSSmVPRTATPATL----ATHAQTVATTTNTSSPMST-------------RRSPSKH 251
Cdd:PHA03247  2795 ---RESLPSPWDPADPPAAVLAPAAA-LPPAASPAGPlpppTSAQPTAPPPPPGPPPPSLplggsvapggdvrRRPPSRS 2870

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  252 MPGDTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPT-ASPVPVPHTSPIPEVEAtSPTTQP 330
Cdd:PHA03247  2871 PAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPpPQPQPPPPPPPRPQPPL-APTTDP 2949

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622861965  331 SPtpytqraAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPKMLATESCQPSTQG 386
Cdd:PHA03247  2950 AG-------AGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTG 2998
PHA03247 PHA03247
large tegument protein UL36; Provisional
 176-401 2.95e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 2.95e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  176 SAPTTLAPTTPTSTRWTPSITATGHPSLSTALAQMPNSSMVPRtaTPATLATHAQTVATTTNTSSPMSTRRSPSKHMPGD 255
Cdd:PHA03247  2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPA--APAAGPPRRLTRPAVASLSESRESLPSPWDPADPP 2808

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  256 TTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVTTTKAQA---------QEPTASPVPVPHTSPIPEVE---- 322
Cdd:PHA03247  2809 AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvapggdvrrRPPSRSPAAKPAAPARPPVRrlar 2888

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  323 -ATSPTTQPSPTPYTQRAAGPgTPQAPEQAATEVT-PGTDSTGPTPRSSGGPKMLATESCQPSTQGQYLVVTTAPLTQAV 400
Cdd:PHA03247  2889 pAVSRSTESFALPPDQPERPP-QPQAPPPPQPQPQpPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967


                   .
gi 1622861965  401 V 401
Cdd:PHA03247  2968 V 2968
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 254-379 6.57e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.28  E-value: 6.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 254 GDTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVtttkAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPT 333
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQP----APAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1622861965 334 PYTQRAAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPKMLATES 379
Cdd:PRK07764  466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-389 6.89e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 6.89e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  194 SITATGHPSLSTALAQMPNSSMVPRTATPATLATHAQTVATTTNTSSPMSTRRSPSKHMPGDTTASPAAPTRPQAQGPIS 273
Cdd:PHA03247  2694 SLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPA 2773

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  274 QVSVDQPvvnTTPEPTPTLTVVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAAT 353
Cdd:PHA03247  2774 APAAGPP---RRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSL 2850

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1622861965  354 E----VTPGTD--------STGPTPRSSGGPKM--LATESCQPSTQGQYL 389
Cdd:PHA03247  2851 PlggsVAPGGDvrrrppsrSPAAKPAAPARPPVrrLARPAVSRSTESFAL 2900
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 140-378 7.22e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 7.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 140 EPATSGGAADGAASNAPTTAASSTTAASSAPTTAASSAPTTLAPTTPTSTRWTPSITATGHPSLST---ALAQMPNSSMV 216
Cdd:PRK07764  587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHhpkHVAVPDASDGG 666

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 217 PRTATPATLATHAQTVATTTNTSSPMSTRRSPSkhmpgdtTASPAAPTRPQAQGPISQVSVDQPVvnttpeptptltvvT 296
Cdd:PRK07764  667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA-------QPAPAPAATPPAGQADDPAAQPPQA--------------A 725

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 297 TTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATEVTPGTDSTGPTPRSSGGPKMLA 376
Cdd:PRK07764  726 QGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVA 805


                  ..
gi 1622861965 377 TE 378
Cdd:PRK07764  806 ME 807
rne PRK10811
ribonuclease E; Reviewed
 220-399 1.69e-03

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 40.79  E-value: 1.69e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  220 ATPATLATHAQTVATTTNTSSPMSTrrspskhmpGDTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVTTTK 299
Cdd:PRK10811   866 VQPVVAEVPVAAAVEPVVSAPVVEA---------VAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDV 936

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965  300 AQAQEPTASPVPV----PHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATEVTPGtdstgptprssggpkml 375
Cdd:PRK10811   937 AVAQEVAEHAEPVvepqDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEP----------------- 999

                          170       180
                   ....*....|....*....|....
gi 1622861965  376 ATESCQPSTQGQYLVVTTAPLTQA 399
Cdd:PRK10811  1000 EVAPAQVPEATVEHNHATAPMTRA 1023
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
193-366 2.16e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.60  E-value: 2.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 193 PSITATGHPSlstALAQMPNSSMVPRTATPATLATHAQTVATTTNTSSPMSTRRSPSKHMPGDTTASPAAPTRPQ--AQG 270
Cdd:PRK07003  360 PAVTGGGAPG---GGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAppATA 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 271 PISQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPTASP---VPVPHTSPIPEVEATSPTTQPSPT--PYTQRAAGPGTP 345
Cdd:PRK07003  437 DRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGsasAPASDAPPDAAFEPAPRAAAPSAAtpAAVPDARAPAAA 516

                         170       180
                  ....*....|....*....|.
gi 1622861965 346 QAPEQAATEVTPGTDSTGPTP 366
Cdd:PRK07003  517 SREDAPAAAAPPAPEARPPTP 537
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 225-362 2.65e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 40.23  E-value: 2.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 225 LATHAQTVATTTNtSSPMSTRRSPSKHMPGDTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTP---TLTVVTTTKAQ 301
Cdd:PRK07994  357 LAFHPAAPLPEPE-VPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllaARQQLQRAQGA 435

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622861965 302 AQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATEVTPGTDST 362
Cdd:PRK07994  436 TKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVAT 496
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
232-368 3.31e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 39.76  E-value: 3.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 232 VATTTNTSSPMSTRRSPSKHMPGDTTaSPAAPTRPQAQgPISQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPTASPVP 311
Cdd:PRK14971  359 LAQLTQKGDDASGGRGPKQHIKPVFT-QPAAAPQPSAA-AAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVP 436

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 312 VPHTSPIPEVEATSPTTQPSP-TPYTQRAAGPGT--PQAPEQAATEVTPGTDSTGPTPRS 368
Cdd:PRK14971  437 VNPPSTAPQAVRPAQFKEEKKiPVSKVSSLGPSTlrPIQEKAEQATGNIKEAPTGTQKEI 496
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 216-362 4.49e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 4.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 216 VPRTATPATLATHAQTVATTTNTSSPmstrrSPSKHMPGDTTASPAAPTRPQAQGPISQVSVDQPvvnTTPEPTPTLTVV 295
Cdd:PRK07764  381 LERRLGVAGGAGAPAAAAPSAAAAAP-----AAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPA---PPSPAGNAPAGG 452

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622861965 296 TTTKAQAQEPTASPVPVPhtspipeVEATSPTTQPSPTPYTQrAAGPGTPQAPEQAATEVTPGTDST 362
Cdd:PRK07764  453 APSPPPAAAPSAQPAPAP-------AAAPEPTAAPAPAPPAA-PAPAAAPAAPAAPAAPAGADDAAT 511
PHA03378 PHA03378
EBNA-3B; Provisional
 191-351 5.59e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 39.28  E-value: 5.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 191 WTPSITATGHPSlstALAQMPNSSMVPRTATPATLAThAQTVATTTNTSSPMSTRRSPSKHMPGDTTASPAAPTRpqAQG 270
Cdd:PHA03378  653 QPPQVEITPYKP---TWTQIGHIPYQPSPTGANTMLP-IQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGR--ARP 726

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 271 PISQVSVDQPvvntTPEPTPTLTVVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTPYTQRAAGPgTPQAPEQ 350
Cdd:PHA03378  727 PAAAPGRARP----PAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAP-TPQPPPQ 801


                  .
gi 1622861965 351 A 351
Cdd:PHA03378  802 A 802
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 248-354 6.02e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 38.93  E-value: 6.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 248 PSKHMPGDTTASPAAPTRPQAQGPI-------SQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPTASPVPVPHTSPI-- 318
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAaapvaqaAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAav 445

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1622861965 319 -----------PEVEATSPTTQPSPTPYTQRAAGPGTPQAPEQAATE 354
Cdd:PRK14951  446 alapappaqaaPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
ZipA COG3115
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 255-355 6.61e-03

Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442349 [Multi-domain]  Cd Length: 298  Bit Score: 38.52  E-value: 6.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622861965 255 DTTASPAAPTRPQAQGPISQVSVDQPVVNTTPEPTPTLTVVTTTKAQAQEPTASPVPVPHTSPIPEVEATSPTTQPSPTP 334
Cdd:COG3115    61 PERVEPEASFDAEDEVREPDQEEVDPLLDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGESAEQEDAPAEEP 140

                          90       100
                  ....*....|....*....|.
gi 1622861965 335 YTQRAAGPGTPQAPEQAATEV 355
Cdd:COG3115   141 EAEAPAEEALAAELCAEPEEV 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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