NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1622860758|ref|XP_028688662|]
View 

dnaJ homolog subfamily C member 4 isoform X1 [Macaca mulatta]

Protein Classification

J domain-containing protein( domain architecture ID 13623022)

J domain-containing protein similar to molecular chaperone DnaJ, a protein that plays crucial roles in protein translation, folding, unfolding, translocation, and degradation, primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9585179|10542335|9644977|8016869|15170475|35729039
SCOP:  4000605

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 34-96 1.18e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 97.16  E-value: 1.18e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14300 super family cl31700
chaperone protein DnaJ; Provisional
 34-160 2.54e-08

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK14300:

Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 54.64  E-value: 2.54e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSlHSRFVELSEAYRVLSREQSRRRYDaqlRSGGPPKSPQTTah 113
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDA-EKKFKEINAAYDVLKDEQKRAAYD---RFGHDAFQNQQS-- 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1622860758 114 dKSAGQTHSSSWAHPNAQYWSQFHSVRPQGPQSRQQQHKQNKQVLRY 160
Cdd:PRK14300   78 -RGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKY 123
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 34-96 1.18e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 97.16  E-value: 1.18e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 34-141 1.46e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 94.38  E-value: 1.46e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYDAQLRSG-GPPKSPQTTA 112
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAeLLLATELAES 80

                          90       100
                  ....*....|....*....|....*....
gi 1622860758 113 HDKSAGQTHSSSWAHPNAQYWSQFHSVRP 141
Cdd:COG0484    81 AAAEAAAAEAKEEAAEAGASEYEAIAEEA 109
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 34-88 5.73e-19

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 79.13  E-value: 5.73e-19
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSR 88
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 34-96 2.09e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 82.11  E-value: 2.09e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYD 67
DnaJ smart00271
DnaJ molecular chaperone homology domain;
34-91 6.74e-17

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 73.81  E-value: 6.74e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622860758   34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSL-HSRFVELSEAYRVLSREQS 91
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEaEEKFKEINEAYEVLSDPEK 60
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 35-96 9.26e-16

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 76.87  E-value: 9.26e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622860758  35 YYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYD 62
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
30-96 4.94e-13

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 69.46  E-value: 4.94e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622860758  30 SSPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDpGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:NF037946    2 EEKRDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYD 67
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 34-160 2.54e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 54.64  E-value: 2.54e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSlHSRFVELSEAYRVLSREQSRRRYDaqlRSGGPPKSPQTTah 113
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDA-EKKFKEINAAYDVLKDEQKRAAYD---RFGHDAFQNQQS-- 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1622860758 114 dKSAGQTHSSSWAHPNAQYWSQFHSVRPQGPQSRQQQHKQNKQVLRY 160
Cdd:PRK14300   78 -RGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKY 123
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 34-96 1.18e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 97.16  E-value: 1.18e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 34-141 1.46e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 94.38  E-value: 1.46e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYDAQLRSG-GPPKSPQTTA 112
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAeLLLATELAES 80

                          90       100
                  ....*....|....*....|....*....
gi 1622860758 113 HDKSAGQTHSSSWAHPNAQYWSQFHSVRP 141
Cdd:COG0484    81 AAAEAAAAEAKEEAAEAGASEYEAIAEEA 109
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
34-112 1.06e-19

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 82.46  E-value: 1.06e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSL-HSRFVELSEAYRVLSREQSRRRYDAQLRSGGPPKSPQTTA 112
Cdd:COG2214     6 DHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALaEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGSASQPSA 85
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 34-88 5.73e-19

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 79.13  E-value: 5.73e-19
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSR 88
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 34-94 1.40e-17

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 75.42  E-value: 1.40e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRR 94
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKRAR 61
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 34-96 2.09e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 82.11  E-value: 2.09e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYD 67
DnaJ smart00271
DnaJ molecular chaperone homology domain;
34-91 6.74e-17

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 73.81  E-value: 6.74e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622860758   34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSL-HSRFVELSEAYRVLSREQS 91
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEaEEKFKEINEAYEVLSDPEK 60
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 34-96 3.52e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 78.69  E-value: 3.52e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYD 68
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 35-96 9.26e-16

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 76.87  E-value: 9.26e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622860758  35 YYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYD 62
PRK14297 PRK14297
molecular chaperone DnaJ;
34-96 4.50e-15

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 75.20  E-value: 4.50e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYD 67
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 31-96 5.27e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 75.16  E-value: 5.27e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622860758  31 SPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14301    2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYD 67
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 34-96 8.28e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 74.49  E-value: 8.28e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYD 64
PRK14289 PRK14289
molecular chaperone DnaJ;
34-96 1.83e-14

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 73.33  E-value: 1.83e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYD 68
PRK14279 PRK14279
molecular chaperone DnaJ;
34-103 2.32e-14

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 73.23  E-value: 2.32e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD---AQLRSGG 103
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDetrRLFAGGG 82
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 34-96 3.99e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 72.53  E-value: 3.99e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYD 66
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 34-96 2.63e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 69.82  E-value: 2.63e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSL-HSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEaEQKFKEIQEAYEVLSDPQKRAMYD 68
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 34-96 4.13e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 69.19  E-value: 4.13e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGN-PSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNkAEAEEKFKEISEAYEVLSDPQKRRQYD 67
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
30-96 4.94e-13

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 69.46  E-value: 4.94e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622860758  30 SSPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDpGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:NF037946    2 EEKRDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYD 67
PRK14280 PRK14280
molecular chaperone DnaJ;
34-96 8.73e-13

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 68.21  E-value: 8.73e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPD--RDPGNpslHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDinKEEGA---DEKFKEISEAYEVLSDDQKRAQYD 66
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 33-96 8.81e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 68.25  E-value: 8.81e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622860758  33 SNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14294    4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYD 67
PRK14295 PRK14295
molecular chaperone DnaJ;
34-96 1.30e-12

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 67.95  E-value: 1.30e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 34-96 2.29e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 67.10  E-value: 2.29e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYD 65
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 34-108 3.28e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 66.61  E-value: 3.28e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYDAqlrsGGPPKSP 108
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDL----GGDPLES 73
PRK14293 PRK14293
molecular chaperone DnaJ;
32-96 6.54e-12

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 65.78  E-value: 6.54e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622860758  32 PSNYYELLGVHPGASTEEVKRAFFSKSKELHPD--RDPGNpslHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDvnKEPGA---EDRFKEINRAYEVLSDPETRARYD 65
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 31-102 1.51e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 64.63  E-value: 1.51e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622860758  31 SPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYDAQLRSG 102
Cdd:PRK14286    2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAG 73
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 30-96 2.65e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 64.10  E-value: 2.65e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622860758  30 SSPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14298    2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYD 67
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 34-96 2.78e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 63.86  E-value: 2.78e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYD 66
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 34-96 3.65e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 63.69  E-value: 3.65e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYD 67
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 34-96 4.74e-11

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 64.06  E-value: 4.74e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDpGNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN-KAPDAASIFAEINEANDVLSNPKKRANYD 64
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 33-105 2.20e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 61.26  E-value: 2.20e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622860758  33 SNYYELLGVHPGASTEEVKRAFFSKSKELHPD--RDPGnpsLHSRFVELSEAYRVLSREQSRRRYDaQLRSGGPP 105
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDinKEPG---AEEKYKEVQEAYETLSDPQKRAAYD-QYGAAGAN 74
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 34-108 1.17e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 58.41  E-value: 1.17e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD------AQLRSGGPPKS 107
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDtygttaASAGWQGPPPG 83


                  .
gi 1622860758 108 P 108
Cdd:PRK14299   84 P 84
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 34-105 1.39e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 58.75  E-value: 1.39e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD--AQLRSGGPP 105
Cdd:PRK14292    3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDrfGTAPGAGMP 75
PRK10266 PRK10266
curved DNA-binding protein;
34-156 5.55e-09

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 56.37  E-value: 5.55e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYDAQLRSGGPPKSPQTTAH 113
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQH 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1622860758 114 dkSAGQTHssswahpNAQYWSQ-FHSVRPQGPQSRQQQHKQNKQ 156
Cdd:PRK10266   84 --GDGQSF-------NAEDFDDiFSSIFGQHARQSRQRPAARGH 118
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 31-96 6.87e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 56.56  E-value: 6.87e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622860758  31 SPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGnPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14287    2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYD 66
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 23-108 1.26e-08

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 55.98  E-value: 1.26e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  23 GAAAGQRSSPSN---YYELLGVHPGASTEEVKRAFFSKSKELHPDRDpGNPslhSRFVELSEAYRVLSREQSRRRYDAQ- 98
Cdd:PTZ00037   15 GFDGGRRKREVDnekLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDP---EKFKEISRAYEVLSDPEKRKIYDEYg 90

                          90
                  ....*....|...
gi 1622860758  99 ---LRSGGPPKSP 108
Cdd:PTZ00037   91 eegLEGGEQPADA 103
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 34-160 2.54e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 54.64  E-value: 2.54e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSlHSRFVELSEAYRVLSREQSRRRYDaqlRSGGPPKSPQTTah 113
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDA-EKKFKEINAAYDVLKDEQKRAAYD---RFGHDAFQNQQS-- 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1622860758 114 dKSAGQTHSSSWAHPNAQYWSQFHSVRPQGPQSRQQQHKQNKQVLRY 160
Cdd:PRK14300   78 -RGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKY 123
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 34-96 2.86e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 54.57  E-value: 2.86e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPgNPSLHSRFVELSEAYRVLSREQSRRRYD 96
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYD 66
PRK14288 PRK14288
molecular chaperone DnaJ;
34-102 2.25e-07

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 52.00  E-value: 2.25e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622860758  34 NYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRRYDAQLRSG 102
Cdd:PRK14288    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKG 72
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
31-90 3.83e-07

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 47.10  E-value: 3.83e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622860758  31 SPSNYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNpsLHSRFVELS--------EAYRVLSREQ 90
Cdd:COG1076     2 QLDDAFELLGLPPDADDAELKRAYRKLQREHHPDRLAAG--LPEEEQRLAlqkaaainEAYETLKDPR 67
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 35-96 9.34e-06

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 47.47  E-value: 9.34e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622860758   35 YYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHsRFVELSEAYRVLSREQSRRRYD 96
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFH-KFKKINEAYQILGDIDKKKMYN 635
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH