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Conserved domains on  [gi|1622854694|ref|XP_028687386|]
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rhotekin isoform X3 [Macaca mulatta]

Protein Classification

RTKN2 family PH domain-containing protein; PH domain-containing protein( domain architecture ID 10654330)

RTKN2 family PH (pleckstrin homology) domain-containing protein similar to PH region of rhotekin-2 (RTKN2) that may play an important role in lymphopoiesis| PH (pleckstrin homology) domain-containing protein similar to Caenorhabditis elegans protein C15H7.4

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PH_rhotekin2 cd13249
Anillin Pleckstrin homology (PH) domain; Anillin (Rhotekin/RTKN; also called PLEKHK/Pleckstrin ...
283-393 1.04e-50

Anillin Pleckstrin homology (PH) domain; Anillin (Rhotekin/RTKN; also called PLEKHK/Pleckstrin homology domain-containing family K) is an actin binding protein involved in cytokinesis. It interacts with GTP-bound Rho proteins and results in the inhibition of their GTPase activity. Dysregulation of the Rho signal transduction pathway has been implicated in many forms of cancer. Anillin proteins have a N-terminal HRI domain/ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. The C-terminal PH domain helps target anillin to ectopic septin containing foci. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


:

Pssm-ID: 270069  Cd Length: 111  Bit Score: 169.10  E-value: 1.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 283 QPTASGTLRVQPAGE-MQNWAQVHGVLKGTNLFCYRRPEDADTGEEPLLTIAINKETRVRAGELDQAlGRPFTLSISNQY 361
Cdd:cd13249     1 QEMMSGYLSQQQSVEgLQSWTRLYCVLKGGNLLCYYSPEEIEAKVEPLLTIPINKETRIRAVEKDSK-GRASSLSIINPY 79
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1622854694 362 GDDEVTHTLQTESREALQSWMEALWQLFFDMS 393
Cdd:cd13249    80 SGEEVTHVLSADSREELQKWMEALWQHFYDMS 111
Anillin pfam08174
Cell division protein anillin; Anillin is a protein involved in septin organization during ...
91-244 2.59e-41

Cell division protein anillin; Anillin is a protein involved in septin organization during cell division. It is an actin binding protein that is localized to the cleavage furrow, and it maintains the localization of active myosin, which ensures the spatial control of concerted contraction during cytokinesis.


:

Pssm-ID: 462393  Cd Length: 139  Bit Score: 145.11  E-value: 2.59e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694  91 CRGRVCISDLRIPLMWKDTEYFKNKGDLHRWAVFLLLQLGEHIQDTEMI-LVDRT-LTDISFQSNVLFAEAGPDFELRLE 168
Cdd:pfam08174   1 CKGKVTISDIRIPLKWRFVDHFKNKGESRRYAFFCLLKCGTEIEATDLVsTLDRTdGTDICFGDPITFSNVPPDFEITVE 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622854694 169 LYGACV-EEEGALTGAPKRLATKlssslgrssgrrvrasldSAGGSGSSPILLPTPAVGGPRYHLLAHTTLTLAAVQ 244
Cdd:pfam08174  81 VYSLRVtEEKLSSALTPKKLASK------------------LASKSLGRSPGGKLAVRRGSKFKLLGSLTLTLLSVG 139
Hr1 smart00742
Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical ...
12-65 1.81e-11

Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical domain found in vertebrate PRK1 and yeast PKC1 protein kinases C. The HR1 in rhophilin bind RhoGTP; those in PRK1 bind RhoA and RhoB. Also called RBD - Rho-binding domain


:

Pssm-ID: 128981  Cd Length: 57  Bit Score: 59.12  E-value: 1.81e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1622854694   12 DTELQRKLDHEIRMREGACKLLAACSQREQAL-EATKSLLVCNSRILSYMGELQR 65
Cdd:smart00742   3 LEDLRRKIEKELKVKEGAENMRKLTSNDRKVLsEAQSMLRESNQKLDLLKEELEK 57
 
Name Accession Description Interval E-value
PH_rhotekin2 cd13249
Anillin Pleckstrin homology (PH) domain; Anillin (Rhotekin/RTKN; also called PLEKHK/Pleckstrin ...
283-393 1.04e-50

Anillin Pleckstrin homology (PH) domain; Anillin (Rhotekin/RTKN; also called PLEKHK/Pleckstrin homology domain-containing family K) is an actin binding protein involved in cytokinesis. It interacts with GTP-bound Rho proteins and results in the inhibition of their GTPase activity. Dysregulation of the Rho signal transduction pathway has been implicated in many forms of cancer. Anillin proteins have a N-terminal HRI domain/ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. The C-terminal PH domain helps target anillin to ectopic septin containing foci. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270069  Cd Length: 111  Bit Score: 169.10  E-value: 1.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 283 QPTASGTLRVQPAGE-MQNWAQVHGVLKGTNLFCYRRPEDADTGEEPLLTIAINKETRVRAGELDQAlGRPFTLSISNQY 361
Cdd:cd13249     1 QEMMSGYLSQQQSVEgLQSWTRLYCVLKGGNLLCYYSPEEIEAKVEPLLTIPINKETRIRAVEKDSK-GRASSLSIINPY 79
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1622854694 362 GDDEVTHTLQTESREALQSWMEALWQLFFDMS 393
Cdd:cd13249    80 SGEEVTHVLSADSREELQKWMEALWQHFYDMS 111
Anillin pfam08174
Cell division protein anillin; Anillin is a protein involved in septin organization during ...
91-244 2.59e-41

Cell division protein anillin; Anillin is a protein involved in septin organization during cell division. It is an actin binding protein that is localized to the cleavage furrow, and it maintains the localization of active myosin, which ensures the spatial control of concerted contraction during cytokinesis.


Pssm-ID: 462393  Cd Length: 139  Bit Score: 145.11  E-value: 2.59e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694  91 CRGRVCISDLRIPLMWKDTEYFKNKGDLHRWAVFLLLQLGEHIQDTEMI-LVDRT-LTDISFQSNVLFAEAGPDFELRLE 168
Cdd:pfam08174   1 CKGKVTISDIRIPLKWRFVDHFKNKGESRRYAFFCLLKCGTEIEATDLVsTLDRTdGTDICFGDPITFSNVPPDFEITVE 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622854694 169 LYGACV-EEEGALTGAPKRLATKlssslgrssgrrvrasldSAGGSGSSPILLPTPAVGGPRYHLLAHTTLTLAAVQ 244
Cdd:pfam08174  81 VYSLRVtEEKLSSALTPKKLASK------------------LASKSLGRSPGGKLAVRRGSKFKLLGSLTLTLLSVG 139
Hr1 smart00742
Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical ...
12-65 1.81e-11

Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical domain found in vertebrate PRK1 and yeast PKC1 protein kinases C. The HR1 in rhophilin bind RhoGTP; those in PRK1 bind RhoA and RhoB. Also called RBD - Rho-binding domain


Pssm-ID: 128981  Cd Length: 57  Bit Score: 59.12  E-value: 1.81e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1622854694   12 DTELQRKLDHEIRMREGACKLLAACSQREQAL-EATKSLLVCNSRILSYMGELQR 65
Cdd:smart00742   3 LEDLRRKIEKELKVKEGAENMRKLTSNDRKVLsEAQSMLRESNQKLDLLKEELEK 57
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
287-385 8.14e-10

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 56.02  E-value: 8.14e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694  287 SGTLRVQPAGEMQNWAQVHGVLKGTNLFCYRrPEDADTGEEPLLTIAInKETRVRAGELDQALGRPFTLSISNqygDDEV 366
Cdd:smart00233   4 EGWLYKKSGGGKKSWKKRYFVLFNSTLLYYK-SKKDKKSYKPKGSIDL-SGCTVREAPDPDSSKKPHCFEIKT---SDRK 78
                           90
                   ....*....|....*....
gi 1622854694  367 THTLQTESREALQSWMEAL 385
Cdd:smart00233  79 TLLLQAESEEEREKWVEAL 97
PH pfam00169
PH domain; PH stands for pleckstrin homology.
287-385 1.24e-08

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 52.95  E-value: 1.24e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 287 SGTLRVQPAGEMQNWAQVHGVLKGTNLFCYRrPEDADTGEEPLLTIAINKETRVRAGELDQAlGRPFTLSISNQYGDDEV 366
Cdd:pfam00169   4 EGWLLKKGGGKKKSWKKRYFVLFDGSLLYYK-DDKSGKSKEPKGSISLSGCEVVEVVASDSP-KRKFCFELRTGERTGKR 81
                          90
                  ....*....|....*....
gi 1622854694 367 THTLQTESREALQSWMEAL 385
Cdd:pfam00169  82 TYLLQAESEEERKDWIKAI 100
HR1 pfam02185
Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of ...
13-70 1.07e-03

Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of the N-terminal non-catalytic part of protein kinase PRK1(PKN). The first two of these repeats were later shown to bind the small G protein rho known to activate PKN in its GTP-bound form. Similar rho-binding domains also occur in a number of other protein kinases and in the rho-binding proteins rhophilin and rhotekin. Recently, the structure of the N-terminal HR1 repeat complexed with RhoA has been determined by X-ray crystallography. It forms an antiparallel coiled-coil fold termed an ACC finger.


Pssm-ID: 460478 [Multi-domain]  Cd Length: 67  Bit Score: 37.50  E-value: 1.07e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622854694  13 TELQRKLDHEIRMREGACKLLAACSQREQ--ALEATKSLLVCNSRILSY----MGELQRRKEAQ 70
Cdd:pfam02185   3 QELRKKIEVEKKIKEGAENMLRLLQATKDrkVLAEAESELRESNRKIQLlreqLRELQARHLPS 66
 
Name Accession Description Interval E-value
PH_rhotekin2 cd13249
Anillin Pleckstrin homology (PH) domain; Anillin (Rhotekin/RTKN; also called PLEKHK/Pleckstrin ...
283-393 1.04e-50

Anillin Pleckstrin homology (PH) domain; Anillin (Rhotekin/RTKN; also called PLEKHK/Pleckstrin homology domain-containing family K) is an actin binding protein involved in cytokinesis. It interacts with GTP-bound Rho proteins and results in the inhibition of their GTPase activity. Dysregulation of the Rho signal transduction pathway has been implicated in many forms of cancer. Anillin proteins have a N-terminal HRI domain/ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. The C-terminal PH domain helps target anillin to ectopic septin containing foci. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270069  Cd Length: 111  Bit Score: 169.10  E-value: 1.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 283 QPTASGTLRVQPAGE-MQNWAQVHGVLKGTNLFCYRRPEDADTGEEPLLTIAINKETRVRAGELDQAlGRPFTLSISNQY 361
Cdd:cd13249     1 QEMMSGYLSQQQSVEgLQSWTRLYCVLKGGNLLCYYSPEEIEAKVEPLLTIPINKETRIRAVEKDSK-GRASSLSIINPY 79
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1622854694 362 GDDEVTHTLQTESREALQSWMEALWQLFFDMS 393
Cdd:cd13249    80 SGEEVTHVLSADSREELQKWMEALWQHFYDMS 111
Anillin pfam08174
Cell division protein anillin; Anillin is a protein involved in septin organization during ...
91-244 2.59e-41

Cell division protein anillin; Anillin is a protein involved in septin organization during cell division. It is an actin binding protein that is localized to the cleavage furrow, and it maintains the localization of active myosin, which ensures the spatial control of concerted contraction during cytokinesis.


Pssm-ID: 462393  Cd Length: 139  Bit Score: 145.11  E-value: 2.59e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694  91 CRGRVCISDLRIPLMWKDTEYFKNKGDLHRWAVFLLLQLGEHIQDTEMI-LVDRT-LTDISFQSNVLFAEAGPDFELRLE 168
Cdd:pfam08174   1 CKGKVTISDIRIPLKWRFVDHFKNKGESRRYAFFCLLKCGTEIEATDLVsTLDRTdGTDICFGDPITFSNVPPDFEITVE 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622854694 169 LYGACV-EEEGALTGAPKRLATKlssslgrssgrrvrasldSAGGSGSSPILLPTPAVGGPRYHLLAHTTLTLAAVQ 244
Cdd:pfam08174  81 VYSLRVtEEKLSSALTPKKLASK------------------LASKSLGRSPGGKLAVRRGSKFKLLGSLTLTLLSVG 139
Hr1 smart00742
Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical ...
12-65 1.81e-11

Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical domain found in vertebrate PRK1 and yeast PKC1 protein kinases C. The HR1 in rhophilin bind RhoGTP; those in PRK1 bind RhoA and RhoB. Also called RBD - Rho-binding domain


Pssm-ID: 128981  Cd Length: 57  Bit Score: 59.12  E-value: 1.81e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1622854694   12 DTELQRKLDHEIRMREGACKLLAACSQREQAL-EATKSLLVCNSRILSYMGELQR 65
Cdd:smart00742   3 LEDLRRKIEKELKVKEGAENMRKLTSNDRKVLsEAQSMLRESNQKLDLLKEELEK 57
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
287-385 8.14e-10

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 56.02  E-value: 8.14e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694  287 SGTLRVQPAGEMQNWAQVHGVLKGTNLFCYRrPEDADTGEEPLLTIAInKETRVRAGELDQALGRPFTLSISNqygDDEV 366
Cdd:smart00233   4 EGWLYKKSGGGKKSWKKRYFVLFNSTLLYYK-SKKDKKSYKPKGSIDL-SGCTVREAPDPDSSKKPHCFEIKT---SDRK 78
                           90
                   ....*....|....*....
gi 1622854694  367 THTLQTESREALQSWMEAL 385
Cdd:smart00233  79 TLLLQAESEEEREKWVEAL 97
PH cd00821
Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are ...
287-385 1.01e-08

Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 275388 [Multi-domain]  Cd Length: 92  Bit Score: 52.54  E-value: 1.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 287 SGTLRVQPAGEMQNWAQVHGVLKGTNLFCYRRPEDAdtGEEPLLTIAINKETRVRageLDQALGRPFTLSISNqygDDEV 366
Cdd:cd00821     2 EGYLLKRGGGGLKSWKKRWFVLFEGVLLYYKSKKDS--SYKPKGSIPLSGILEVE---EVSPKERPHCFELVT---PDGR 73
                          90
                  ....*....|....*....
gi 1622854694 367 THTLQTESREALQSWMEAL 385
Cdd:cd00821    74 TYYLQADSEEERQEWLKAL 92
PH pfam00169
PH domain; PH stands for pleckstrin homology.
287-385 1.24e-08

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 52.95  E-value: 1.24e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 287 SGTLRVQPAGEMQNWAQVHGVLKGTNLFCYRrPEDADTGEEPLLTIAINKETRVRAGELDQAlGRPFTLSISNQYGDDEV 366
Cdd:pfam00169   4 EGWLLKKGGGKKKSWKKRYFVLFDGSLLYYK-DDKSGKSKEPKGSISLSGCEVVEVVASDSP-KRKFCFELRTGERTGKR 81
                          90
                  ....*....|....*....
gi 1622854694 367 THTLQTESREALQSWMEAL 385
Cdd:pfam00169  82 TYLLQAESEEERKDWIKAI 100
PH_Ses cd13288
Sesquipedalian family Pleckstrin homology (PH) domain; The sesquipedalian family has 2 ...
307-392 6.74e-04

Sesquipedalian family Pleckstrin homology (PH) domain; The sesquipedalian family has 2 mammalian members: Ses1 and Ses2, which are also callled 7 kDa inositol polyphosphate phosphatase-interacting protein 1 and 2. They play a role in endocytic trafficking and are required for receptor recycling from endosomes, both to the trans-Golgi network and the plasma membrane. Members of this family form homodimers and heterodimers. Sesquipedalian interacts with inositol polyphosphate 5-phosphatase OCRL-1 (INPP5F) also known as Lowe oculocerebrorenal syndrome protein, a phosphatase enzyme that is involved in actin polymerization and is found in the trans-Golgi network and INPP5B. Sesquipedalian contains a single PH domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270105 [Multi-domain]  Cd Length: 120  Bit Score: 39.53  E-value: 6.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622854694 307 VLKGTNLFCYRRPEDadtgEEPLLTIaINKETRVRAGELDQalgrPFTLSISNQyGDDEVTHTLQTESREALQSWMEALW 386
Cdd:cd13288    30 VLKGNLLFYFEKKGD----REPLGVI-VLEGCTVELAEDAE----PYAFAIRFD-GPGARSYVLAAENQEDMESWMKALS 99

                  ....*.
gi 1622854694 387 QLFFDM 392
Cdd:cd13288   100 RASYDY 105
HR1 pfam02185
Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of ...
13-70 1.07e-03

Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of the N-terminal non-catalytic part of protein kinase PRK1(PKN). The first two of these repeats were later shown to bind the small G protein rho known to activate PKN in its GTP-bound form. Similar rho-binding domains also occur in a number of other protein kinases and in the rho-binding proteins rhophilin and rhotekin. Recently, the structure of the N-terminal HR1 repeat complexed with RhoA has been determined by X-ray crystallography. It forms an antiparallel coiled-coil fold termed an ACC finger.


Pssm-ID: 460478 [Multi-domain]  Cd Length: 67  Bit Score: 37.50  E-value: 1.07e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622854694  13 TELQRKLDHEIRMREGACKLLAACSQREQ--ALEATKSLLVCNSRILSY----MGELQRRKEAQ 70
Cdd:pfam02185   3 QELRKKIEVEKKIKEGAENMLRLLQATKDrkVLAEAESELRESNRKIQLlreqLRELQARHLPS 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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