|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
214-278 |
2.36e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.36 E-value: 2.36e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 278
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
8.34e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 8.34e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
214-279 |
6.82e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.06 E-value: 6.82e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 214 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 279
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
3.53e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 3.53e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1012-1909 |
2.30e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 2.30e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1012 QELKAGYEKA--TSETKTKHEEILQNLRKTLLDTeDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMS 1089
Cdd:TIGR02168 155 EERRAIFEEAagISKYKERRKETERKLERTRENL-DRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLR 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1090 -----EELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQ 1164
Cdd:TIGR02168 234 leelrEELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAN 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1165 EHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLIT 1244
Cdd:TIGR02168 314 LERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1245 EnfilakdkddiIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVErdnalqnnrdlqlETDMLL 1324
Cdd:TIGR02168 394 Q-----------IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELE-------------ELEEEL 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1325 HDQEKLNASLQAALqvkqllrseaSGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEeikarravtdseciqllhEK 1404
Cdd:TIGR02168 450 EELQEELERLEEAL----------EELREELEEAEQALDAAERELAQLQARLDSLERLQE------------------NL 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1405 ETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQK----MTKLKKHQDSLLKEKSA 1480
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKaiafLKQNELGRVTFLPLDSI 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1481 LETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQEnmkLLGNI-------DALkkELQERKNENQELVASKCDL-- 1551
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY---LLGGVlvvddldNAL--ELAKKLRPGYRIVTLDGDLvr 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1552 ------------SLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTccsekniLLRDSLNLQEECQKLSEEIQEMQQSLI 1619
Cdd:TIGR02168 657 pggvitggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAE-------LRKELEELEEELEQLRKELEELSRQIS 729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1620 LEQE---ARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLA 1696
Cdd:TIGR02168 730 ALRKdlaRLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1697 AHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESY 1776
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1777 FILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLED 1856
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEE 969
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 1857 TKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1909
Cdd:TIGR02168 970 ARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
693-1482 |
5.91e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 91.27 E-value: 5.91e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 693 KEKENSLEAIKSKLDKAEDQhLVEMEETLNKLQ------------EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 760
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLErqaekaerykelKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 761 KLLDLDA-----------LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLS 829
Cdd:TIGR02168 254 ELEELTAelqeleekleeLRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 830 EVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLI 909
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 910 KAKEKLENDIAEIMKMSGDNSSQLTKMndELRLKERYVEELQLKLTKANENASFLQKSIEdmtlKAEQSQQEAAEKHEEE 989
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKELQA--ELEELEEELEELQEELERLEEALEELREELE----EAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 990 KKELERKLSDLEKKMETSHNQCQELK-------------------AGYEKA------------TSETKTKHEEILQNLRK 1038
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKALLKnqsglsgilgvlselisvdEGYEAAieaalggrlqavVVENLNAAKKAIAFLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1039 TLLDT----EDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSekqllsqegndlkLENG 1114
Cdd:TIGR02168 568 NELGRvtflPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDD-------------LDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1115 SLLSKLVELEAKIALLQGDQ-QKLWSVNETLNLEKEKFLEEKQDAEKHYEQehlnKEVLAVEREKLLKEINVAQEELLKI 1193
Cdd:TIGR02168 635 LELAKKLRPGYRIVTLDGDLvRPGGVITGGSAKTNSSILERRREIEELEEK----IEELEEKIAELEKALAELRKELEEL 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1194 NMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKL----------ITENFILAKDKDDIIQKLQSS 1263
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELeaeieeleerLEEAEEELAEAEAEIEELEAQ 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1264 YEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNAS---------- 1333
Cdd:TIGR02168 791 IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEieeleeliee 870
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1334 ----LQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDsecIQLLHEKETLAA 1409
Cdd:TIGR02168 871 leseLEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE---VRIDNLQERLSE 947
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 1410 SERRLLAEKEELlsenriiTEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALE 1482
Cdd:TIGR02168 948 EYSLTLEEAEAL-------ENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLT 1013
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
428-1200 |
7.16e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 7.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 428 LNQLEEEKRKVEDLQFRVEEESITKGDLETqtklehARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKD 507
Cdd:TIGR02168 202 LKSLERQAEKAERYKELKAELRELELALLV------LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 508 LALRVQEVAELRRRLesnkpagdvdmsLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEkL 587
Cdd:TIGR02168 276 VSELEEEIEELQKEL------------YALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAE-L 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 588 SKENESLKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAEL------KTQIEKMRLDYQH 661
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRSKVAQLELQIASLNNEIerlearLERLEDRRERLQQ 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 662 EIE-NLQNQQDSERSAHAKEMEALRAKLMKVIKEKENsLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAK 740
Cdd:TIGR02168 422 EIEeLLKKLEEAELKELQAELEELEEELEELQEELER-LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 741 cneqtkvIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAA-EKQIKHLEIEKNAESSKA-SSITRELQGR- 817
Cdd:TIGR02168 501 -------LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlGGRLQAVVVENLNAAKKAiAFLKQNELGRv 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 818 ---ELKLTNLQENLSEVSQVKDTLEKELQILKE--KFAEASEEAVS-------VQRSMQETVNKLHQKEEQFNMLSSD-- 883
Cdd:TIGR02168 574 tflPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgd 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 884 -------------------------LEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMND 938
Cdd:TIGR02168 654 lvrpggvitggsaktnssilerrreIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 939 ELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKkelerklsDLEKKMETSHNQCQELKAGY 1018
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE--------ELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1019 EKAtsetktkhEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAK----SLTYLLTSAKKEIELMSEELRG 1094
Cdd:TIGR02168 806 DEL--------RAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSedieSLAAEIEELEELIEELESELEA 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1095 LKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKF-LEEKQDAEKHYEQEHLNKEVLA 1173
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLeVRIDNLQERLSEEYSLTLEEAE 957
|
810 820
....*....|....*....|....*..
gi 1622847176 1174 VEREKLLKEINVAQEELLKINMENDSL 1200
Cdd:TIGR02168 958 ALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
352-1163 |
1.00e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.03 E-value: 1.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 352 ALQEALKEKQ-----QHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQLRTMVEAADREKVE 426
Cdd:TIGR02168 217 ELKAELRELElallvLRLEELREELEELQEELKEAEEELEELTAELQ-----------ELEEKLEELRLEVSELEEEIEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 427 LLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEK 506
Cdd:TIGR02168 286 LQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 507 DLALRVQEVAELRRRLESNKPAgdvdmSLSLLQEISSLQEKLEVTRTdhqrEITSLKEHFG-AREETHQKEIKALYTATE 585
Cdd:TIGR02168 366 ELEELESRLEELEEQLETLRSK-----VAQLELQIASLNNEIERLEA----RLERLEDRRErLQQEIEELLKKLEEAELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 586 KLSKENESLKSKLEHANKENSDVIAlwksKLETAIASHQQAMEELkVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIEN 665
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEE----ALEELREELEEAEQAL-DAAERELAQLQARLDSLERLQENLEGFSEGVKAL 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 666 LQNQQD------------SERSAHAKEME-ALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVK 732
Cdd:TIGR02168 512 LKNQSGlsgilgvlseliSVDEGYEAAIEaALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDR 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 733 ELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDL--------DALQKASSEGKSEM-------------------EKLRQQ 785
Cdd:TIGR02168 592 EILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGvlvvddldNALELAKKLRPGYRivtldgdlvrpggvitggsAKTNSS 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 786 LEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQE 865
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 866 TVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKfrekdereeqlikaKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKER 945
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAE--------------IEELEAQIEQLKEELKALREALDELRAELTLLNE 817
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 946 YVEELQLKLTKANENASFLQKSIEDMTLKAEQsqqeaaekheeekkeLERKLSDLEKKMETSHNQCQELKAGYEKATSEt 1025
Cdd:TIGR02168 818 EAANLRERLESLERRIAATERRLEDLEEQIEE---------------LSEDIESLAAEIEELEELIEELESELEALLNE- 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1026 KTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKsltylltSAKKEIELMSEELRGLKSEKQLLSQE 1105
Cdd:TIGR02168 882 RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLE-------LRLEGLEVRIDNLQERLSEEYSLTLE 954
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 1106 gNDLKLENGsLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYE 1163
Cdd:TIGR02168 955 -EAEALENK-IEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKE 1010
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-922 |
2.89e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 2.89e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDG---HDQHVLELEAKMDQLRTMVEAADREKVELL 428
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 429 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDL 508
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 509 ALRVQEVAELRRRLESNKpagdvDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLS 588
Cdd:COG1196 403 EELEEAEEALLERLERLE-----EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 589 KENESLKSKLEHANKENSDVIALWKSKLE---TAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIEN 665
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADYEGFlegVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDE 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 666 -LQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQ 744
Cdd:COG1196 558 vAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALR 637
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 745 TKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNL 824
Cdd:COG1196 638 RAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 825 QENLSE--VSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdLEKLRENL----------- 891
Cdd:COG1196 718 EEELEEeaLEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER-------LEREIEALgpvnllaieey 790
|
570 580 590
....*....|....*....|....*....|.
gi 1622847176 892 AEMEAKFREKDEREEQLIKAKEKLENDIAEI 922
Cdd:COG1196 791 EELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
625-1366 |
1.11e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.57 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 625 QAMEELKVSFSKGLGTETAEFAELKTQIEKMR---LDYQHEIENLQNQQdSERSAHAKEMEALRAKLMKVIKEKENSLEA 701
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLEELRLEVSELEeeiEELQKELYALANEI-SRLEQQKQILRERLANLERQLEELEAQLEE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 702 IKSKLDKAEDQhLVEMEETLNKLQEaeikvkELEVLQAKCNEQTKVIDNFTSQLKATEEKLldlDALQKASSEGKSEMEK 781
Cdd:TIGR02168 328 LESKLDELAEE-LAELEEKLEELKE------ELESLEAELEELEAELEELESRLEELEEQL---ETLRSKVAQLELQIAS 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 782 LRQQLEAAEKQIKHLEIEKNAESSKASSITRELQgrELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQR 861
Cdd:TIGR02168 398 LNNEIERLEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQ 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 862 SMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREE------QLIKAKEKLENDIAEIMkmsGDNSSQLTK 935
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGilgvlsELISVDEGYEAAIEAAL---GGRLQAVVV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 936 MNDElrlkeRYVEELQLKLTKANENASFLQ-KSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKK----------- 1003
Cdd:TIGR02168 553 ENLN-----AAKKAIAFLKQNELGRVTFLPlDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlv 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1004 ---METSHNQCQELKAGY---------------------EKATSETKTKHEeiLQNLRKTLLDTEDKLKGAREENSGLLQ 1059
Cdd:TIGR02168 628 vddLDNALELAKKLRPGYrivtldgdlvrpggvitggsaKTNSSILERRRE--IEELEEKIEELEEKIAELEKALAELRK 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1060 ELEELRKQADKAK----SLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQ 1135
Cdd:TIGR02168 706 ELEELEEELEQLRkeleELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1136 KLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQ 1215
Cdd:TIGR02168 786 ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELE 865
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1216 LSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDI---IQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKL 1292
Cdd:TIGR02168 866 ELIEELESELEALLNERASLEEALALLRSELEELSEELRELeskRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL 945
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1293 SNLdntciaLKVERDNALQNNRDLQLETDMLLHDQEKLNASLQ-------AALQVKQLLRSEASGLRAQLDDASKALRKA 1365
Cdd:TIGR02168 946 SEE------YSLTLEEAEALENKIEDDEEEARRRLKRLENKIKelgpvnlAAIEEYEELKERYDFLTAQKEDLTEAKETL 1019
|
.
gi 1622847176 1366 E 1366
Cdd:TIGR02168 1020 E 1020
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
691-1298 |
2.37e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.68 E-value: 2.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 691 VIKEKENSLEAIKSKLDKAE-------DQHLVEMEETLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKL- 762
Cdd:COG1196 194 ILGELERQLEPLERQAEKAEryrelkeELKELEAELLLLKLRELE---AELEELEAELEELEAELEELEAELAELEAELe 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 763 ---LDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLE 839
Cdd:COG1196 271 elrLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 840 KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDI 919
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEAL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 920 AEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSD 999
Cdd:COG1196 431 AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1000 LEKKMETS----HNQCQELKAGYEKATSETKTKHEEILQN-LRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSL 1074
Cdd:COG1196 511 KAALLLAGlrglAGAVAVLIGVEAAYEAALEAALAAALQNiVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAA 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1075 TYLLTSAKKEIELMSEELRGLKSEKQ-----LLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKE 1149
Cdd:COG1196 591 ALARGAIGAAVDLVASDLREADARYYvlgdtLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1150 KFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSkdaliaktEKDQ 1229
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL--------EELL 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1230 EERDHLADQIKKLITENFILAKDKDDIiQKLQSS--------------YEELVKDQKALVQDIEDLTAEKKSALEKLSNL 1295
Cdd:COG1196 743 EEEELLEEEALEELPEPPDLEELEREL-ERLEREiealgpvnllaieeYEELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
...
gi 1622847176 1296 DNT 1298
Cdd:COG1196 822 DRE 824
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1358-2078 |
1.54e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.10 E-value: 1.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1358 ASKALR----KAELETMQLqatnTSLTKLLEEIKARRAVTDSECIQLLHEKETLAaserRLLAEKEELLSENRIITEKLH 1433
Cdd:TIGR02168 209 AEKAERykelKAELRELEL----ALLVLRLEELREELEELQEELKEAEEELEELT----AELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1434 KCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESA-- 1511
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAel 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1512 NRRIIVQENMKLLgnIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTccSEKN 1591
Cdd:TIGR02168 361 EELEAELEELESR--LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1592 ILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKE---SSLYENNQLHGRMVLLEQEVEELRvctEELQSEKFVLL 1668
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEEALEELREELEEAEQaldAAERELAQLQARLDSLERLQENLE---GFSEGVKALLK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1669 QEKTKSE--QEVAEIIE-EKELLTAEAAQLAAHIKTL--------KSDFAALSKSK--------------AELQELHSCL 1723
Cdd:TIGR02168 514 NQSGLSGilGVLSELISvDEGYEAAIEAALGGRLQAVvvenlnaaKKAIAFLKQNElgrvtflpldsikgTEIQGNDREI 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1724 TKILDDLQ--LNHEVTLAEKAQ-----------VMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEisqlAKTN 1790
Cdd:TIGR02168 594 LKNIEGFLgvAKDLVKFDPKLRkalsyllggvlVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGS----AKTN 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1791 ShisaNLLESQNENRTLRKDKNKLTLKIRELET-----LQSFTAAQTA-EDAMQIMEQMTKEKTETLASLEDTKQTNAKL 1864
Cdd:TIGR02168 670 S----SILERRREIEELEEKIEELEEKIAELEKalaelRKELEELEEElEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1865 QNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKL 1944
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA---ANL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1945 EEERSVLNNQLLEMKKSlpsntlreskfIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLhsv 2024
Cdd:TIGR02168 823 RERLESLERRIAATERR-----------LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEA--- 888
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 2025 VQTLESDKVKLELKVKNLELQLKENKRQLSSSsgnTDTQADEDERAQESQQMID 2078
Cdd:TIGR02168 889 LALLRSELEELSEELRELESKRSELRRELEEL---REKLAQLELRLEGLEVRID 939
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1083-1907 |
3.63e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.57 E-value: 3.63e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1083 KEIELMSEELRglkSEKQLLSQEGNDlKLENGSLLSKLVELEAKIALLQgdqqklwsvNETLNLEKEKFLEEKQDAEKHY 1162
Cdd:TIGR02169 187 ERLDLIIDEKR---QQLERLRREREK-AERYQALLKEKREYEGYELLKE---------KEALERQKEAIERQLASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1163 EQ-----EHLNKEVlaVEREKLLKEIN-----VAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEER 1232
Cdd:TIGR02169 254 EKlteeiSELEKRL--EEIEQLLEELNkkikdLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEI 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1233 DHLADQIKKLITENFILAKDKDdiiqKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQN 1312
Cdd:TIGR02169 332 DKLLAEIEELEREIEEERKRRD----KLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1313 NRDLQLETDMLLHDQEKLNAS----------LQAALQVKQL----LRSEASGLRAQLDDASKALRKAELETMQLQATNTS 1378
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAiagieakineLEEEKEDKALeikkQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1379 LTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSenriITEKLHKCSEEAA---------HTEMSLNEK 1449
Cdd:TIGR02169 488 LQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGS----VGERYATAIEVAAgnrlnnvvvEDDAVAKEA 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1450 ITYLtseKEMASQKMTKL---KKHQDSLLKEKSALETQNGVLLaerensikaigDLKRqCDQESANRRIIVQENMKLLGN 1526
Cdd:TIGR02169 564 IELL---KRRKAGRATFLplnKMRDERRDLSILSEDGVIGFAV-----------DLVE-FDPKYEPAFKYVFGDTLVVED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1527 IDALKKELQERKnenqeLVASKCDL----------SLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRD 1596
Cdd:TIGR02169 629 IEAARRLMGKYR-----MVTLEGELfeksgamtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENR 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1597 SLNLQEECQKLSEEIQEMQ--QSLILEQEARAKEKesslyennqlhgrmvlLEQEVEELRVCTEELQSEKfvllQEKTKS 1674
Cdd:TIGR02169 704 LDELSQELSDASRKIGEIEkeIEQLEQEEEKLKER----------------LEELEEDLSSLEQEIENVK----SELKEL 763
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1675 EQEVAEIIEEKELLTAEAAQLAAH-----IKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQ 1749
Cdd:TIGR02169 764 EARIEELEEDLHKLEEALNDLEARlshsrIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1750 NLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTA 1829
Cdd:TIGR02169 844 DLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELK 923
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1830 AQTAEDAMQIME-----QMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE----------LNKSKELLTVENQ 1894
Cdd:TIGR02169 924 AKLEALEEELSEiedpkGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEyeevlkrldeLKEKRAKLEEERK 1003
|
890
....*....|...
gi 1622847176 1895 KMEEFRKEIETLK 1907
Cdd:TIGR02169 1004 AILERIEEYEKKK 1016
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1257-2049 |
6.93e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.79 E-value: 6.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1257 IQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDntciALKVERDNALQnnrDLQLETDMLLHDQEKLNASLQA 1336
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELR----LEVSELEEEIE---ELQKELYALANEISRLEQQKQI 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1337 ALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKArravtdseciQLLHEKETLAASERRLLA 1416
Cdd:TIGR02168 307 LRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA----------ELEELEAELEELESRLEE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1417 EKEELLSENRIITEKLHKcseeaahtEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSaletqngvlLAERENSI 1496
Cdd:TIGR02168 377 LEEQLETLRSKVAQLELQ--------IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE---------EAELKELQ 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1497 KAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELvASKCDlslMLKEAQNAKKNLEKEHTHILQAK 1576
Cdd:TIGR02168 440 AELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL-QARLD---SLERLQENLEGFSEGVKALLKNQ 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1577 ENLDAELNtccsekniLLRDSLNLQEECQK-LSEEIQEMQQSLILEQEARAKEKESSLYENNQlhGRMVLLEQEVEELRv 1655
Cdd:TIGR02168 516 SGLSGILG--------VLSELISVDEGYEAaIEAALGGRLQAVVVENLNAAKKAIAFLKQNEL--GRVTFLPLDSIKGT- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1656 cteELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKaELQELHSCLTkiLDDLQLNHE 1735
Cdd:TIGR02168 585 ---EIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAK-KLRPGYRIVT--LDGDLVRPG 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1736 VTLAEKAQvmQDNQNLLAEKSEMmlekDELLKEKEMLAESYFILQKEISQLAKTnshisanLLESQNENRTLRKDKNKLT 1815
Cdd:TIGR02168 659 GVITGGSA--KTNSSILERRREI----EELEEKIEELEEKIAELEKALAELRKE-------LEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1816 LKIRELETlQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQK 1895
Cdd:TIGR02168 726 RQISALRK-DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREA 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1896 MEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEvtsHQKLEEERSVLNNQLLEMKKSLPsntlRESKFIKD 1975
Cdd:TIGR02168 805 LDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ---IEELSEDIESLAAEIEELEELIE----ELESELEA 877
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1976 ADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE-NASAKSLHSVVQTLEsdkvKLELKVKNLELQLKEN 2049
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRElEELREKLAQLELRLE----GLEVRIDNLQERLSEE 948
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1061-1719 |
2.14e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.13 E-value: 2.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1061 LEELRKQADKAksltylltsakkeielmsEELRGLKSEKQLLSQEgndlklengSLLSKLVELEAKIALLQGDQQKLwsv 1140
Cdd:COG1196 202 LEPLERQAEKA------------------ERYRELKEELKELEAE---------LLLLKLRELEAELEELEAELEEL--- 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1141 netlNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDA 1220
Cdd:COG1196 252 ----EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1221 LIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKL---QSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDN 1297
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALleaEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1298 TCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNT 1377
Cdd:COG1196 408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1378 SLTKLLEEIKARRAVTDSEciqllhEKETLAASERRLLAEKEELLSENRIITEKLhkcsEEAAHTEMSLNEKItYLTSEK 1457
Cdd:COG1196 488 EAAARLLLLLEAEADYEGF------LEGVKAALLLAGLRGLAGAVAVLIGVEAAY----EAALEAALAAALQN-IVVEDD 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1458 EMASQKMTKLKKHQDS------LLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALK 1531
Cdd:COG1196 557 EVAAAAIEYLKAAKAGratflpLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1532 KELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEhthiLQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEI 1611
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA----LLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1612 QEMQQSLILEQEARAKEKEsslyennqlhgrmvLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIE--EKEL-- 1687
Cdd:COG1196 713 EEERLEEELEEEALEEQLE--------------AEREELLEELLEEEELLEEEALEELPEPPDLEELERELErlEREIea 778
|
650 660 670
....*....|....*....|....*....|....*....
gi 1622847176 1688 -----LTA--EAAQLAAHIKTLKSDFAALSKSKAELQEL 1719
Cdd:COG1196 779 lgpvnLLAieEYEELEERYDFLSEQREDLEEARETLEEA 817
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
624-1390 |
2.29e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 76.26 E-value: 2.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 624 QQAMEELKVsFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQ---QDSERSAHAKEMEALRAKLMKV---IKEKEN 697
Cdd:TIGR02169 173 EKALEELEE-VEENIERLDLIIDEKRQQLERLRREREKAERYQALLkekREYEGYELLKEKEALERQKEAIerqLASLEE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 698 SLEAIKSKLDKAEDqhlvEMEETLNKLQEAEIKVKELEvlQAKCNEQTKVIDNFTSQLKATEEKLldldalqkassegks 777
Cdd:TIGR02169 252 ELEKLTEEISELEK----RLEEIEQLLEELNKKIKDLG--EEEQLRVKEKIGELEAEIASLERSI--------------- 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 778 emEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAV 857
Cdd:TIGR02169 311 --AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 858 SVQRSMQETVNKLH-------QKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNS 930
Cdd:TIGR02169 389 DYREKLEKLKREINelkreldRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 931 SQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIED-----MTLKAE---------QSQQEAAEKHEEEKKELERK 996
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraveEVLKASiqgvhgtvaQLGSVGERYATAIEVAAGNR 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 997 LSDLEKKMETSHNQCQEL----KAGYEKATSETKTKHEEILQNLRKT---------LLDTEDKLKGARE---ENSGLLQE 1060
Cdd:TIGR02169 549 LNNVVVEDDAVAKEAIELlkrrKAGRATFLPLNKMRDERRDLSILSEdgvigfavdLVEFDPKYEPAFKyvfGDTLVVED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1061 LEELRKQ-----------------------ADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLL 1117
Cdd:TIGR02169 629 IEAARRLmgkyrmvtlegelfeksgamtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1118 SKLVELEAKIALLQGDQQKLWSVNETLN---LEKEKFLEEKQD--AEKHYEQEHLNKEVLAVERE--KLLKEINVAQEEL 1190
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKerlEELEEDLSSLEQeiENVKSELKELEARIEELEEDlhKLEEALNDLEARL 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1191 LKINMENdsLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLqssyEELVKD 1270
Cdd:TIGR02169 789 SHSRIPE--IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI----ENLNGK 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1271 QKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAAL-QVKQLLR---- 1345
Cdd:TIGR02169 863 KEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEeELSEIEDpkge 942
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1622847176 1346 -SEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARR 1390
Cdd:TIGR02169 943 dEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRL 988
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
846-1686 |
2.43e-13 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 76.16 E-value: 2.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 846 KEKFAEASEEAVSVQRSMQETVNKLHQK-EEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMK 924
Cdd:pfam02463 151 KPERRLEIEEEAAGSRLKRKKKEALKKLiEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 925 MSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTlKAEQSQQEAAEKHEEEKKELERKLSDLEKKM 1004
Cdd:pfam02463 231 YLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEE-KEKKLQEEELKLLAKEEEELKSELLKLERRK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1005 ETSHNQCQELKAGYEKATSETKTKHEEI--LQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAK 1082
Cdd:pfam02463 310 VDDEEKLKESEKEKKKAEKELKKEKEEIeeLEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSA 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1083 KEI-----ELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQD 1157
Cdd:pfam02463 390 AKLkeeelELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1158 AEKHYEQEHLNKEVLA---VEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEK------- 1227
Cdd:pfam02463 470 SEDLLKETQLVKLQEQlelLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKvaistav 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1228 --DQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVE 1305
Cdd:pfam02463 550 ivEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGIL 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1306 RDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEE 1385
Cdd:pfam02463 630 KDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREK 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1386 IKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKcSEEAAHTEMSLNEKITYLTSEKEMASQKMT 1465
Cdd:pfam02463 710 EELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLK-KEEKEEEKSELSLKEKELAEEREKTEKLKV 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1466 KLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELV 1545
Cdd:pfam02463 789 EEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEEL 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1546 ASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIqEMQQSLILEQEAR 1625
Cdd:pfam02463 869 LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYE-EEPEELLLEEADE 947
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847176 1626 AKEKESSLYENNQlhgRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKE 1686
Cdd:pfam02463 948 KEKEENNKEEEEE---RNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKK 1005
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
847-1664 |
5.15e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.10 E-value: 5.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 847 EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLA----EMEAKFREKDEREEQLIKAKEKLENDIAEI 922
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQAllkeKREYEGYELLKEKEALERQKEAIERQLASL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 923 MKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASF-LQKSIEDMTLKAEQSQqeaaekheeekkeleRKLSDLE 1001
Cdd:TIGR02169 250 EEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEAEIASLE---------------RSIAEKE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1002 KKMETSHNQCQELKAGYEKaTSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQA----DKAKSLTYL 1077
Cdd:TIGR02169 315 RELEDAEERLAKLEAEIDK-LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFaetrDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1078 LTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEA----KIALLQGDQQKLWSVNETLNLEKEKFLE 1153
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEekedKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1154 EKQDAEK-HYEQEHLNKEVLAVEREKLLKEI----NVAQEELLK----------------------------------IN 1194
Cdd:TIGR02169 474 LKEEYDRvEKELSKLQRELAEAEAQARASEErvrgGRAVEEVLKasiqgvhgtvaqlgsvgeryataievaagnrlnnVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1195 MENDSLQASKVSmqtLIEELQLSKDALIAKTEKDQEERDhladqIKKLITENFI-LAKDKDDIIQKLQSSYEELVKDQkA 1273
Cdd:TIGR02169 554 VEDDAVAKEAIE---LLKRRKAGRATFLPLNKMRDERRD-----LSILSEDGVIgFAVDLVEFDPKYEPAFKYVFGDT-L 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1274 LVQDIEdlTAEKKSALEKLSNLDNTCIALK-------VERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRS 1346
Cdd:TIGR02169 625 VVEDIE--AARRLMGKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1347 EASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAAS----ERRLLAEKEEL- 1421
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARieelEEDLHKLEEALn 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1422 -------LSENRIITEKLHKCSEEAAHTEMSLNE---KITYLTSEKEMASQKMTKLKKHQDSLLKEKSALEtqngvllAE 1491
Cdd:TIGR02169 783 dlearlsHSRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIE-------KE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1492 RENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTH 1571
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1572 ILQAKENLDAElntccSEKNILLRDslnLQEECQKLSEEIQEMQQSLILEQEarakEKESSLYENNQLHGRMVLLEQEVE 1651
Cdd:TIGR02169 936 IEDPKGEDEEI-----PEEELSLED---VQAELQRVEEEIRALEPVNMLAIQ----EYEEVLKRLDELKEKRAKLEEERK 1003
|
890
....*....|...
gi 1622847176 1652 ELRVCTEELQSEK 1664
Cdd:TIGR02169 1004 AILERIEEYEKKK 1016
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
334-1035 |
1.02e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.41 E-value: 1.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 334 GLLTETSSRYARKISGTTALQEALK--EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALARDGHDQHVLELEAKMD 411
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEARKAEDARKAEEARK----AEDAKRVEIARKAEDARKAEEARKAE 1173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 412 QLRTMVEAADREKVELLNQLE--EEKRKVEDLQFRVEEESITKG-------DLETQTKLEHARIKElEQSLLFEKTKADK 482
Cdd:PTZ00121 1174 DAKKAEAARKAEEVRKAEELRkaEDARKAEAARKAEEERKAEEArkaedakKAEAVKKAEEAKKDA-EEAKKAEEERNNE 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 483 LQRELEDTRVATVS---------EKSRIMEL----EKDLALRVQEVAELRRRLESNKPAGDVDMSLSLLQEISSLQEKLE 549
Cdd:PTZ00121 1253 EIRKFEEARMAHFArrqaaikaeEARKADELkkaeEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 550 VTRTDHQrEITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKlETAIASHQQAMEE 629
Cdd:PTZ00121 1333 AAKKKAE-EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAK-KKAEEDKKKADEL 1410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 630 LKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKA 709
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKK 1490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 710 EDQHLVEMEETLNKLQEAEIKVKELEvlqaKCNEQTKvidnfTSQLKATEEKLlDLDALQKASSEGKSEMEKLRQQLEAA 789
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAK----KAEEAKK-----ADEAKKAEEAK-KADEAKKAEEKKKADELKKAEELKKA 1560
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 790 EkQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQilKEKFAEASEEAVSVQRSMQETVNK 869
Cdd:PTZ00121 1561 E-EKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK--KAEEAKIKAEELKKAEEEKKKVEQ 1637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 870 LHQKEEQFNMLSSDLEKLRENL---AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERY 946
Cdd:PTZ00121 1638 LKKKEAEEKKKAEELKKAEEENkikAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 947 VEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETK 1026
Cdd:PTZ00121 1718 AEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD 1797
|
....*....
gi 1622847176 1027 TKHEEILQN 1035
Cdd:PTZ00121 1798 KKIKDIFDN 1806
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1278-2094 |
1.58e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.56 E-value: 1.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1278 IEDLTAEKKSALEKLS----NLD--NTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQaaLQVKQLLRSEASGL 1351
Cdd:TIGR02169 165 VAEFDRKKEKALEELEeveeNIErlDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYEL--LKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1352 RAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKAR-RAVTDSECIQLLHEKETLAASERRLLAEKEELLSEnriite 1430
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERE------ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1431 klhkcSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAEREnsikaigdlkrqcdQES 1510
Cdd:TIGR02169 317 -----LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELE--------------EVD 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1511 ANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEK 1590
Cdd:TIGR02169 378 KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1591 NILLRDSLNLQEECQKLSEEIQEMQQSLI-LEQEARAKEKESSLYENNQLHGRMV--LLEQEVEELRVCTEELQS--EKF 1665
Cdd:TIGR02169 458 EQLAADLSKYEQELYDLKEEYDRVEKELSkLQRELAEAEAQARASEERVRGGRAVeeVLKASIQGVHGTVAQLGSvgERY 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1666 VLLQEkTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHeVTLAEK---- 1741
Cdd:TIGR02169 538 ATAIE-VAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDL-VEFDPKyepa 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1742 -AQVMQDN---QNLLAEKSEM------MLEKDELLKEKEMLAESYFILQKEISQLAKtnshiSANLLESQNENRTLRKDK 1811
Cdd:TIGR02169 616 fKYVFGDTlvvEDIEAARRLMgkyrmvTLEGELFEKSGAMTGGSRAPRGGILFSRSE-----PAELQRLRERLEGLKREL 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1812 NKLTLKIRELEtlqsftaaqtaedamqimeqmtKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTV 1891
Cdd:TIGR02169 691 SSLQSELRRIE----------------------NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSS 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1892 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSR-DEVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRE 1969
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEK 828
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1970 S----------KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS----LHSVVQTLESDKVKL 2035
Cdd:TIGR02169 829 EylekeiqelqEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKerdeLEAQLRELERKIEEL 908
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 2036 ELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDL 2094
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEI 967
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
407-1208 |
2.17e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 72.84 E-value: 2.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 407 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEES---------ITKGDLETQTKLEHARIKelEQSLLFEK 477
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESNelhekqkfyLRQSVIDLQTKLQEMQME--RDAMADIR 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 478 TKADKLQRELEDTRVATVSEKSRIMELEKD-LALRVQEVAELRRRLESNKpagdvdmslSLLQEISSLQEKLEVTRTDHQ 556
Cdd:pfam15921 134 RRESQSQEDLRNQLQNTVHELEAAKCLKEDmLEDSNTQIEQLRKMMLSHE---------GVLQEIRSILVDFEEASGKKI 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 557 REITSLKE-HFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENsdvialwKSKLETAIASHQQAMEELKVSFS 635
Cdd:pfam15921 205 YEHDSMSTmHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSES-------QNKIELLLQQHQDRIEQLISEHE 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 636 KGLGTETAEFAELKTQIEKMrldyQHEIENLQNQQDSERSAHakemealraklMKVIKEKENSLEAIKSKLDKAEDQHLV 715
Cdd:pfam15921 278 VEITGLTEKASSARSQANSI----QSQLEIIQEQARNQNSMY-----------MRQLSDLESTVSQLRSELREAKRMYED 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 716 EMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDnftsqlkateeklldlDALQKAssegKSEMEKLRQQLEAAEKQIKH 795
Cdd:pfam15921 343 KIEELEKQLVLANSELTEARTERDQFSQESGNLD----------------DQLQKL----LADLHKREKELSLEKEQNKR 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 796 LEIEKNAESSKASSITRELQGRELKLTNLQENLSEV-SQVKDTLEKELQILKEKfAEASEEAVSVQRSMQETVNKLHQKE 874
Cdd:pfam15921 403 LWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMkSECQGQMERQMAAIQGK-NESLEKVSSLTAQLESTKEMLRKVV 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 875 EQFNMLSSDLEKLRENLAEMEAKFREKdereEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKL 954
Cdd:pfam15921 482 EELTAKKMTLESSERTVSDLTASLQEK----ERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQM 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 955 TKANENASFLQKSIEDMTLKAEQSQQeaaekheeEKKELERKLSDLEKKMETSHNQCQELKAGYEKATS---ETKTKHEE 1031
Cdd:pfam15921 558 AEKDKVIEILRQQIENMTQLVGQHGR--------TAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAkirELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1032 ILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELR--------GLKSEKQLLS 1103
Cdd:pfam15921 630 LELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMEtttnklkmQLKSAQSELE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1104 QEGNDLKLENGS---LLSKLVELEAKIALLQGDQQKLWSvnetlnleKEKFLEE---KQDAEKHYEQEHLNK-----EVL 1172
Cdd:pfam15921 710 QTRNTLKSMEGSdghAMKVAMGMQKQITAKRGQIDALQS--------KIQFLEEamtNANKEKHFLKEEKNKlsqelSTV 781
|
810 820 830
....*....|....*....|....*....|....*...
gi 1622847176 1173 AVEREKLLKEINV--AQEELLKINMENDSLQASKVSMQ 1208
Cdd:pfam15921 782 ATEKNKMAGELEVlrSQERRLKEKVANMEVALDKASLQ 819
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
818-1391 |
2.41e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 2.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 818 ELKLTNLQENLSEVSQVKDTLEKELQILKE-------------------------KFAEASEEAVSVQRSMQETVNKLHQ 872
Cdd:COG1196 178 ERKLEATEENLERLEDILGELERQLEPLERqaekaeryrelkeelkeleaellllKLRELEAELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 873 KEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQL 952
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 953 KLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELK--AGYEKATSETKTKHE 1030
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAqlEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1031 EILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLK 1110
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1111 LENGSLLSKLVelEAKIALLQGDQQKLW-SVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEE 1189
Cdd:COG1196 498 EAEADYEGFLE--GVKAALLLAGLRGLAgAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1190 LLKINMENDSLQASKVSMQTLIEELQlskdALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVK 1269
Cdd:COG1196 576 FLPLDKIRARAALAAALARGAIGAAV----DLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTL 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1270 DQKALVQDIEDLTAEKK----SALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLR 1345
Cdd:COG1196 652 EGEGGSAGGSLTGGSRRellaALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLE 731
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1622847176 1346 SEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRA 1391
Cdd:COG1196 732 AEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
456-1324 |
2.42e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 72.70 E-value: 2.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 456 ETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRL-ESNKPAGDVDMS 534
Cdd:pfam02463 173 EALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIdLLQELLRDEQEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 535 LSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSdvialwks 614
Cdd:pfam02463 253 IESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK-------- 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 615 KLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENL----QNQQDSERSAHAKEMEALRAKLMK 690
Cdd:pfam02463 325 KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLakkkLESERLSSAAKLKEEELELKSEEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 691 VIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQK 770
Cdd:pfam02463 405 KEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 771 AssegKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL------------SEVSQVKDTL 838
Cdd:pfam02463 485 Q----LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVenykvaistaviVEVSATADEV 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 839 EKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKdEREEQLIKAKEKLEND 918
Cdd:pfam02463 561 EERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAK-VVEGILKDTELTKLKE 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 919 IAEIMKMSGDNSSQLTKMNDElrlKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLS 998
Cdd:pfam02463 640 SAKAKESGLRKGVSLEEGLAE---KSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLK 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 999 DLEKKMETSHNQCQELKAGYEKATSETKTKheEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLL 1078
Cdd:pfam02463 717 LEAEELLADRVQEAQDKINEELKLLKQKID--EEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEE 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1079 TSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDA 1158
Cdd:pfam02463 795 KLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLL 874
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1159 EKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLS-----KDALIAKTEKDQEERD 1233
Cdd:pfam02463 875 KEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYeeepeELLLEEADEKEKEENN 954
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1234 HLADQIKKLITENFILAKDKDDIIQKLQssYEELVKDQKALVQDIEDLTAEKKSALEKLsnLDNTCIALKVERDNALQNN 1313
Cdd:pfam02463 955 KEEEEERNKRLLLAKEELGKVNLMAIEE--FEEKEERYNKDELEKERLEEEKKKLIRAI--IEETCQRLKEFLELFVSIN 1030
|
890
....*....|.
gi 1622847176 1314 RDLQLETDMLL 1324
Cdd:pfam02463 1031 KGWNKVFFYLE 1041
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
718-1281 |
2.45e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 2.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 718 EETLNKLQEA------------------------------------EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEK 761
Cdd:COG1196 175 EEAERKLEATeenlerledilgelerqleplerqaekaeryrelkeELKELEAELLLLKLRELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 762 lldLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKE 841
Cdd:COG1196 255 ---LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 842 LQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAE 921
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEA-------LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 922 IMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLE 1001
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1002 K--KMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGARE----------------ENSGLLQELEE 1063
Cdd:COG1196 485 ElaEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEaaleaalaaalqnivvEDDEVAAAAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1064 LRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEgndLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNET 1143
Cdd:COG1196 565 YLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS---DLREADARYYVLGDTLLGRTLVAARLEAALRRAVT 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1144 LNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIA 1223
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEEL 721
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 1224 KTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDL 1281
Cdd:COG1196 722 EEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-1098 |
2.52e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.79 E-value: 2.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 345 RKISGTTALQEALKEKQQHIEQLLAE-----RDLERAEVAKATSHVGEIEQELALARDGHD---QHVLELEAKMDQLRTM 416
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAekeRELEDAEERLAKLEAE 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 417 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRvatvS 496
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK----R 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 497 EKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMsLSLLQEISSLQEKLEVTRTDhqreitslkehfgarEETHQKE 576
Cdd:TIGR02169 407 ELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK-EDKALEIKKQEWKLEQLAAD---------------LSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 577 IKALYTATEKLSKENESLKSKLEHANKEnsdvialwKSKLETAIASHQQAMEELKVSFSKGLGT---------------E 641
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQ--------ARASEERVRGGRAVEEVLKASIQGVHGTvaqlgsvgeryataiE 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 642 TAEFAELKTQIEKMRLDYQHEIENLqnqqdsersahaKEMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQ--HLVEME- 718
Cdd:TIGR02169 543 VAAGNRLNNVVVEDDAVAKEAIELL------------KRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFavDLVEFDp 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 719 ----------------ETLNKLQEAEIKVKeLEVLQAKCNEQTKVI----------DNFTSQLKATEEKLLD-------- 764
Cdd:TIGR02169 611 kyepafkyvfgdtlvvEDIEAARRLMGKYR-MVTLEGELFEKSGAMtggsraprggILFSRSEPAELQRLRErleglkre 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 765 LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQI 844
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 845 LKEKFAEASEEAVSVQRSMQETvnKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMK 924
Cdd:TIGR02169 770 LEEDLHKLEEALNDLEARLSHS--RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE 847
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 925 MSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQsQQEAAEKHEEEKKELERKLSDLEKKM 1004
Cdd:TIGR02169 848 QIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRE-LERKIEELEAQIEKKRKRLSELKAKL 926
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1005 ETSHNQCQELkaGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKE 1084
Cdd:TIGR02169 927 EALEEELSEI--EDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKA 1004
|
810
....*....|....
gi 1622847176 1085 IELMSEELRGLKSE 1098
Cdd:TIGR02169 1005 ILERIEEYEKKKRE 1018
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
422-917 |
7.63e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 70.86 E-value: 7.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 422 REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ----------------R 485
Cdd:PRK03918 217 PELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEekvkelkelkekaeeyI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 486 ELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDvdmslSLLQEISSLQEKLEVTRTDHQ--REITSLK 563
Cdd:PRK03918 297 KLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-----ELKKKLKELEKRLEELEERHElyEEAKAKK 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 564 EhfgaREETHQKEIKALytATEKLSKENESLKSKLEHANKENSDVIALwKSKLETAIASHQQAMEELKVsfskglgteta 643
Cdd:PRK03918 372 E----ELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITAR-IGELKKEIKELKKAIEELKK----------- 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 644 efAELKTQIEKMRLDYQHEiENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIK-----SKLDKAEDQhLVEME 718
Cdd:PRK03918 434 --AKGKCPVCGRELTEEHR-KELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKkeselIKLKELAEQ-LKELE 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 719 ETLNK--LQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQL--------EA 788
Cdd:PRK03918 510 EKLKKynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELeelgfesvEE 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 789 AEKQIKHLE------IEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILK-----EKFAEASEEAV 857
Cdd:PRK03918 590 LEERLKELEpfyneyLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYL 669
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 858 SVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEakfrEKDEREEQLIKAKEKLEN 917
Cdd:PRK03918 670 ELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE----KAKKELEKLEKALERVEE 725
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
212-272 |
7.84e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 70.87 E-value: 7.84e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847176 212 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 272
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
373-1196 |
1.11e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.48 E-value: 1.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 373 LERAEVAKATSHVGEIEQELALARDGHD---QHVLELEAKMDQLRTMVE--AADREKVELLNQLEEEKRKVEdlqfrVEE 447
Cdd:TIGR02169 153 VERRKIIDEIAGVAEFDRKKEKALEELEeveENIERLDLIIDEKRQQLErlRREREKAERYQALLKEKREYE-----GYE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 448 ESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQ-EVAELRRRLESNK 526
Cdd:TIGR02169 228 LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKeKIGELEAEIASLE 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 527 PAgdVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENs 606
Cdd:TIGR02169 308 RS--IAEKERELEDAEERLAKLEAEIDKLLAEIEELER----EIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF- 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 607 dviALWK---SKLETAIASHQQAMEELKVSFSKGLGTE---TAEFAELKTQIEKmrldyqheIENLQNQQDSERSAHAKE 680
Cdd:TIGR02169 381 ---AETRdelKDYREKLEKLKREINELKRELDRLQEELqrlSEELADLNAAIAG--------IEAKINELEEEKEDKALE 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 681 MEALRAKLMKVIKEK---ENSLEAIKSKLDKAEDqhlvEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVID-------- 749
Cdd:TIGR02169 450 IKKQEWKLEQLAADLskyEQELYDLKEEYDRVEK----ELSKLQRELAEAEAQARASEERVRGGRAVEEVLKasiqgvhg 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 750 ---------------------------------------NFTSQLKATEEKLLDLDALQKASSEGKSEMEK--------- 781
Cdd:TIGR02169 526 tvaqlgsvgeryataievaagnrlnnvvveddavakeaiELLKRRKAGRATFLPLNKMRDERRDLSILSEDgvigfavdl 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 782 -------------------LRQQLEAAEKQIKH-----LEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDT 837
Cdd:TIGR02169 606 vefdpkyepafkyvfgdtlVVEDIEAARRLMGKyrmvtLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEG 685
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 838 LEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEN 917
Cdd:TIGR02169 686 LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEA 765
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 918 DIAEIMKMSGDNSSQLTKMNDELRlkERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEkheeekkelerkl 997
Cdd:TIGR02169 766 RIEELEEDLHKLEEALNDLEARLS--HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY------------- 830
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 998 sdLEKKMETSHNQ---CQELKAGYEKATSETKTKHEEI---LQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1071
Cdd:TIGR02169 831 --LEKEIQELQEQridLKEQIKSIEKEIENLNGKKEELeeeLEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL 908
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1072 KSltylltsakkEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSkLVELEAKIALLQGDQQKLWSVNETLNLEKEKF 1151
Cdd:TIGR02169 909 EA----------QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEE-IPEEELSLEDVQAELQRVEEEIRALEPVNMLA 977
|
890 900 910 920
....*....|....*....|....*....|....*....|....*
gi 1622847176 1152 LEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINME 1196
Cdd:TIGR02169 978 IQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
649-1373 |
1.37e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 70.15 E-value: 1.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 649 KTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKV------IKEKENSLEAIKSKLDKAEDQHLVEMEETLN 722
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLqtklqeMQMERDAMADIRRRESQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 723 KLQEAE-IKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKL--RQQLEAAEKQIKHLEIE 799
Cdd:pfam15921 153 ELEAAKcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMhfRSLGSAISKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 800 KNAESSKASSITRELQGRELKLTN-----LQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSM----QETVNKL 870
Cdd:pfam15921 233 ISYLKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLeiiqEQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 871 HQKEEQFNMLSSDLEKLRENLAEMEAKFREK-DEREEQLIKAKEKLENDIAE---IMKMSGDNSSQLTKMNDEL--RLKE 944
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSELREAKRMYEDKiEELEKQLVLANSELTEARTErdqFSQESGNLDDQLQKLLADLhkREKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 945 RYVEELQLKL-----TKANENASFLQKSIEDMTLKAEQsqqeaaekheeekkelerklsdLEKKMETSHNQCQElKAGYE 1019
Cdd:pfam15921 393 LSLEKEQNKRlwdrdTGNSITIDHLRRELDDRNMEVQR----------------------LEALLKAMKSECQG-QMERQ 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1020 KATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKqadKAKSLTYLLTSAKKEIELMSEELRGLKSEK 1099
Cdd:pfam15921 450 MAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSER---TVSDLTASLQEKERAIEATNAEITKLRSRV 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1100 QLLSQEGNDLKLENGSLLSKLVELEA-KIALLQGDQqklwsVNETLNLEKEKFLEekqdaekHYEQEHLNKEVLAVEREK 1178
Cdd:pfam15921 527 DLKLQELQHLKNEGDHLRNVQTECEAlKLQMAEKDK-----VIEILRQQIENMTQ-------LVGQHGRTAGAMQVEKAQ 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1179 LLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALI------AKTEKD-QEERDHLADQIKKLITENFILAK 1251
Cdd:pfam15921 595 LEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVnagserLRAVKDiKQERDQLLNEVKTSRNELNSLSE 674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1252 DKDDIIQKLQSSYEELVKDQKALVQDIEDLTAE---KKSALEKLSNLDNTCIALKVERDNALQNNRDlqlETDMLLHDQE 1328
Cdd:pfam15921 675 DYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSEleqTRNTLKSMEGSDGHAMKVAMGMQKQITAKRG---QIDALQSKIQ 751
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1622847176 1329 KLNASLQAALQVKQLLRSEASGLRAQLDDASKALRK--AELETMQLQ 1373
Cdd:pfam15921 752 FLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKmaGELEVLRSQ 798
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
357-895 |
3.26e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.99 E-value: 3.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 357 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALARDG-------HDQHVLELEAKMDQLRTMVEAADREKV 425
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 426 ELLNQLEEE--KRKVEDLQFRVEEESITK--GDLETQTKLEHARIKELEQSLLFEKTK--------------ADKLQREL 487
Cdd:pfam15921 342 DKIEELEKQlvLANSELTEARTERDQFSQesGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitIDHLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 488 EDTRVATVSEKSRIM--------ELEKDLAL------RVQEVAELRRRLESNKpagdvDMSLSLLQEISSLQEKLEVTRT 553
Cdd:pfam15921 422 DDRNMEVQRLEALLKamksecqgQMERQMAAiqgkneSLEKVSSLTAQLESTK-----EMLRKVVEELTAKKMTLESSER 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 554 DHQREITSLKEHFGAREETHqKEIKALYTATEKLSKENESLKSKLEHANKENSDVIAL-----WKSKLETAIASHQQAME 628
Cdd:pfam15921 497 TVSDLTASLQEKERAIEATN-AEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALklqmaEKDKVIEILRQQIENMT 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 629 ELKVSFSKGLGTETAEFAELKTQIEKMRLDYQhEIENLQNQQDS---ERSAHAKEMEALRAKLMKVIKEKENSLEAIKSK 705
Cdd:pfam15921 576 QLVGQHGRTAGAMQVEKAQLEKEINDRRLELQ-EFKILKDKKDAkirELEARVSDLELEKVKLVNAGSERLRAVKDIKQE 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 706 ldkaEDQHLVEMEETLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKateeklldldaLQKASSEgkSEMEKLRQQ 785
Cdd:pfam15921 655 ----RDQLLNEVKTSRNELNSLS---EDYEVLKRNFRNKSEEMETTTNKLK-----------MQLKSAQ--SELEQTRNT 714
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 786 LEAAEKQIKHleieknaESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQE 865
Cdd:pfam15921 715 LKSMEGSDGH-------AMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNK 787
|
570 580 590
....*....|....*....|....*....|
gi 1622847176 866 TVNKLHqkeeqfnMLSSDLEKLRENLAEME 895
Cdd:pfam15921 788 MAGELE-------VLRSQERRLKEKVANME 810
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
999-1544 |
3.73e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 3.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 999 DLEKKMETSHNQCQELKAGYEKATSETKTKHEEIlQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQ----------- 1067
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAEL-EELRLELEELELELEEAQAEEYELLAELARLEQDiarleerrrel 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1068 ADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLE 1147
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1148 KEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEK 1227
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1228 DQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKL--SNLDNTCIALKVE 1305
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAleAALAAALQNIVVE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1306 RDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEE 1385
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1386 IKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMT 1465
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 1466 KLKKHQDSLLKEKSALETQNGVLLAEREnsikaigdlkrqcdQESANRRIIVQENMKLLGNIDALKKELQERKNENQEL 1544
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELL--------------EEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
481-1098 |
5.69e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.17 E-value: 5.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 481 DKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREIT 560
Cdd:PRK03918 175 KRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELP--ELREELEKLEKEVKELEELKEEIE----ELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 561 SLKEHFGAREEthqkEIKALYTATEKLSKENESLKSKLEHANKensdvialwkskletaiashqqaMEELKVSFSKgLGT 640
Cdd:PRK03918 249 SLEGSKRKLEE----KIRELEERIEELKKEIEELEEKVKELKE-----------------------LKEKAEEYIK-LSE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 641 ETAEFAELKTQIEKMRLDYQHEIENLQnqqdsersahakemealraKLMKVIKEKENSLEAIKSKLDKAEDQhLVEMEET 720
Cdd:PRK03918 301 FYEEYLDELREIEKRLSRLEEEINGIE-------------------ERIKELEEKEERLEELKKKLKELEKR-LEELEER 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 721 LNKLQEAEIKVKELEVLQAKCNEQTKvidnftsqlkatEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKhlEIEK 800
Cdd:PRK03918 361 HELYEEAKAKKEELERLKKRLTGLTP------------EKLEKELEELEKAKEEIEEEISKITARIGELKKEIK--ELKK 426
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 801 NAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQ--RSMQETVNKLHQKEEQFN 878
Cdd:PRK03918 427 AIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLK 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 879 MLSSDLEKLreNLAEMEAKFREKDEREEQLIKAK-------------EKLENDIAEIMKMSGDNSSQLTKMNDELR-LKE 944
Cdd:PRK03918 507 ELEEKLKKY--NLEELEKKAEEYEKLKEKLIKLKgeikslkkeleklEELKKKLAELEKKLDELEEELAELLKELEeLGF 584
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 945 RYVEELQLKLtkaNENASFLQKSIEDMTLKAE-QSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATS 1023
Cdd:PRK03918 585 ESVEELEERL---KELEPFYNEYLELKDAEKElEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEY 661
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1024 ETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSE 1098
Cdd:PRK03918 662 EELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKAL 736
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
687-1243 |
6.97e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.78 E-value: 6.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 687 KLMKVIKEKENSLEAIKSKLDKAEDQHlvemeetlNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLD 766
Cdd:PRK03918 166 NLGEVIKEIKRRIERLEKFIKRTENIE--------ELIKEKE---KELEEVLREINEISSELPELREELEKLEKEVKELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 767 ALQKASSEGKSEMEKLRQQLEAAEKQIKHLEiEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILK 846
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKLEEKIRELE-ERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 847 EKFAEASEEAVSVQRSMQETVNKlhqkeeqfnmlSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENdIAEIMKMS 926
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEK-----------EERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE-LERLKKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 927 GDNSsqLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQ-----------SQQEAAEKHEEEKKELER 995
Cdd:PRK03918 382 TGLT--PEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElkkakgkcpvcGRELTEEHRKELLEEYTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 996 KLSDLEKKMETSHNQCQELKAgyEKATSETKTKHEEILQNLRKTLldteDKLKGAREENSGLlqELEELRKQADKAKSLT 1075
Cdd:PRK03918 460 ELKRIEKELKEIEEKERKLRK--ELRELEKVLKKESELIKLKELA----EQLKELEEKLKKY--NLEELEKKAEEYEKLK 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1076 YLLTSAKKEIELMSEELR---GLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKiallqgDQQKLWSVNETLNLEKEKFL 1152
Cdd:PRK03918 532 EKLIKLKGEIKSLKKELEkleELKKKLAELEKKLDELEEELAELLKELEELGFE------SVEELEERLKELEPFYNEYL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1153 EEKqDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQaSKVSMQTL--IEELQLSKDALIAKTEKDQE 1230
Cdd:PRK03918 606 ELK-DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELE-KKYSEEEYeeLREEYLELSRELAGLRAELE 683
|
570
....*....|...
gi 1622847176 1231 ERDHLADQIKKLI 1243
Cdd:PRK03918 684 ELEKRREEIKKTL 696
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
687-1291 |
7.26e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 67.74 E-value: 7.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 687 KLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLD 766
Cdd:TIGR04523 79 ILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLN 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 767 alqkassegkSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENlsevSQVKDTLEKELQILK 846
Cdd:TIGR04523 159 ----------NKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKK----IQKNKSLESQISELK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 847 EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLaemEAKFREKDEREEQLIKAKEKLENDIAEIMKMS 926
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQL---SEKQKELEQNNKKIKELEKQLNQLKSEISDLN 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 927 GDNSSQLTK-MNDELRLKERYVEELQLKLTKANENASFLQKSIEDMT----------------LKAEQSQ----QEAAEK 985
Cdd:TIGR04523 302 NQKEQDWNKeLKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKkeltnsesensekqreLEEKQNEieklKKENQS 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 986 HEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEIlQNLRKTLLDTEDKLKGAREENSGLLQELEELR 1065
Cdd:TIGR04523 382 YKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEI-ERLKETIIKNNSEIKDLTNQDSVKELIIKNLD 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1066 KqadKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLwsvnETLN 1145
Cdd:TIGR04523 461 N---TRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL----ESEK 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1146 LEKEKFLEEKQDaekhyeqeHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKT 1225
Cdd:TIGR04523 534 KEKESKISDLED--------ELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEI 605
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847176 1226 EKDQEERDHLADQIKKLITENfilaKDKDDIIQKLQSSYEELVKDQKaLVQDIEDLTAEKKSALEK 1291
Cdd:TIGR04523 606 EEKEKKISSLEKELEKAKKEN----EKLSSIIKNIKSKKNKLKQEVK-QIKETIKEIRNKWPEIIK 666
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
1.28e-10 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 66.63 E-value: 1.28e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847176 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1000-1717 |
1.42e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.07 E-value: 1.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1000 LEKKMETSHNQCQELkagyEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLqeleELRKQADKAKSltyllt 1079
Cdd:pfam15921 76 IERVLEEYSHQVKDL----QRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMA----DIRRRESQSQE------ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1080 SAKKEIELMSEELRGLKSEKQLLSQEGNdlklengsllSKLVELEAKIALLQGDQQKLWSVNETLnlekekfleEKQDAE 1159
Cdd:pfam15921 142 DLRNQLQNTVHELEAAKCLKEDMLEDSN----------TQIEQLRKMMLSHEGVLQEIRSILVDF---------EEASGK 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1160 KHYEQEHLNK---EVLAVEREKLLKEINVA-------------QEELLKINMENDS---LQASKVSMQTLIEELQLSKDA 1220
Cdd:pfam15921 203 KIYEHDSMSTmhfRSLGSAISKILRELDTEisylkgrifpvedQLEALKSESQNKIellLQQHQDRIEQLISEHEVEITG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1221 LIAKTEKDQEERDHLADQIKkLITENfilAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCI 1300
Cdd:pfam15921 283 LTEKASSARSQANSIQSQLE-IIQEQ---ARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSEL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1301 A-LKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASG-------LRAQLDDASKALRKAE--LETM 1370
Cdd:pfam15921 359 TeARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGnsitidhLRRELDDRNMEVQRLEalLKAM 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1371 Q-------------LQATNTSLTKLleeikarravtDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSE 1437
Cdd:pfam15921 439 KsecqgqmerqmaaIQGKNESLEKV-----------SSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQE 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1438 EAAHTEMSlNEKITYLTSEKEMASQKMTKLKKHQDSLLK---EKSALETQNG-------VLLAERENSIKAIGDLKR--- 1504
Cdd:pfam15921 508 KERAIEAT-NAEITKLRSRVDLKLQELQHLKNEGDHLRNvqtECEALKLQMAekdkvieILRQQIENMTQLVGQHGRtag 586
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1505 -------QCDQESANRRIIVQENMKLLGNIDALKKELQERKNEnqeLVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKE 1577
Cdd:pfam15921 587 amqvekaQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSD---LELEKVKLVNAGSERLRAVKDIKQERDQLLNEVK 663
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1578 NLDAELNTCCSEKNILLRDSLNLQEECQKLS-----------EEIQEMQQSLILEQEARAKEKESSLYENNQL---HGRM 1643
Cdd:pfam15921 664 TSRNELNSLSEDYEVLKRNFRNKSEEMETTTnklkmqlksaqSELEQTRNTLKSMEGSDGHAMKVAMGMQKQItakRGQI 743
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847176 1644 VLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKS--KAELQ 1717
Cdd:pfam15921 744 DALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVAldKASLQ 819
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1526-2107 |
1.89e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.24 E-value: 1.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1526 NIDALKKELQERKNENQELVASKCDLslmlkeaQNAKKNLEKEHTHILQAkenldaelntcCSEKNILLRDslnLQEECQ 1605
Cdd:PRK03918 166 NLGEVIKEIKRRIERLEKFIKRTENI-------EELIKEKEKELEEVLRE-----------INEISSELPE---LREELE 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1606 KLSEEIQEMQqSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQsEKFVLLQEKTKSEQEVAEIIEEK 1685
Cdd:PRK03918 225 KLEKEVKELE-ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELE-EKVKELKELKEKAEEYIKLSEFY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1686 ELLTAE-------AAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDL-QLNHEVTLAEKAQVMQDNQNLLaEKSE 1757
Cdd:PRK03918 303 EEYLDElreiekrLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLeELEERHELYEEAKAKKEELERL-KKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1758 MMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELetlqsftaaqTAEDAM 1837
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGREL----------TEEHRK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1838 QIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLkENNLKNVEELNKSKELL-----------TVENQKMEEFRKEIETL 1906
Cdd:PRK03918 452 ELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKELAeqlkeleeklkKYNLEELEKKAEEYEKL 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1907 KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLP---SNTLRE-----SKFI--KDA 1976
Cdd:PRK03918 531 KEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVeelEERLKElepfyNEYLelKDA 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1977 DEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSV--VQTLESDKVKLELKVKNLELQLKENKRQLS 2054
Cdd:PRK03918 611 EKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEKRRE 690
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 2055 SSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALN 2107
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALS 743
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1323-1909 |
2.82e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 2.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1323 LLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLH 1402
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1403 EKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEkityLTSEKEMASQKMTKLKKHQDSLLKEKSALE 1482
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE----AEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1483 TQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAK 1562
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1563 KNLEKEHTHILQAKENLDAELNTccsekNILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGR 1642
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLL-----LLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1643 MV-LLEQEVEELRVCTEELQSEK------FVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAE 1715
Cdd:COG1196 548 LQnIVVEDDEVAAAAIEYLKAAKagratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1716 LQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESyfILQKEISQLAKTNSHISA 1795
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAER--LAEEELELEEALLAEEEE 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1796 NLLESQNENRTLRKDKNKLTLKIRELETLQsfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENN 1875
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAERE--ELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVN 783
|
570 580 590
....*....|....*....|....*....|....
gi 1622847176 1876 LKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1909
Cdd:COG1196 784 LLAIEEYEELEERYDFLSEQREDLEEARETLEEA 817
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
352-980 |
5.50e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 65.06 E-value: 5.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalardghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR--------EELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 432 EEEKRKVEDLQFRVEeesitkgDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRV---ATVSEKSRIMELEKDL 508
Cdd:PRK02224 282 RDLRERLEELEEERD-------DLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVaaqAHNEEAESLREDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 509 ALRVQEVAELRRRLESNkpagdvdmslslLQEISSLQEKLEVTRTDHQREITSLKEHFGAREEthqkeikalytATEKLS 588
Cdd:PRK02224 355 EERAEELREEAAELESE------------LEEAREAVEDRREEIEELEEEIEELRERFGDAPV-----------DLGNAE 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 589 KENESLKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSfskglgtetaefaelktqiekmrldyqheiENLQN 668
Cdd:PRK02224 412 DFLEELREERDELREREAELEATLRT-ARERVEEAEALLEAGKCP------------------------------ECGQP 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 669 QQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLDKAEDqhLVEMEETLNKLQEAEIKVKELevlqakcneqtkvi 748
Cdd:PRK02224 461 VEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAED--LVEAEDRIERLEERREDLEEL-------------- 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 749 dnFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGrelkLTNLQENL 828
Cdd:PRK02224 525 --IAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIES----LERIRTLL 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 829 SEVSQVKDTLEkELQILKEKFAEASEEAVSVQRSMQETVNKLHQK--EEQFNMLSSDLEKLRENLAEMEAKFREKDEREE 906
Cdd:PRK02224 599 AAIADAEDEIE-RLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERD 677
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 907 QLIKAKEKLENDIAEImkmsgdnssqltkmnDELRLKERYVEELQLKLTKANENASFLQKSIedMTLKAEQSQQ 980
Cdd:PRK02224 678 DLQAEIGAVENELEEL---------------EELRERREALENRVEALEALYDEAEELESMY--GDLRAELRQR 734
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-971 |
5.84e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.09 E-value: 5.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 345 RKISGTTALQEALKEKQQH---IEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAK----MDQLRTMV 417
Cdd:TIGR02169 217 LKEKREYEGYELLKEKEALerqKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeeeQLRVKEKI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 418 EAADREKVELLNQLEEEKRKVEDLqfrveEESITKGDLETQTKLEhaRIKELEQSLLFEKTKADKLQRELEDTRVATVSE 497
Cdd:TIGR02169 297 GELEAEIASLERSIAEKERELEDA-----EERLAKLEAEIDKLLA--EIEELEREIEEERKRRDKLTEEYAELKEELEDL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 498 KSRIMELEKDLALRVQEVAELRRRLESNKPAGDvdmslSLLQEISSLQE---KLEVTRTDHQREITSLKE---HFGAREE 571
Cdd:TIGR02169 370 RAELEEVDKEFAETRDELKDYREKLEKLKREIN-----ELKRELDRLQEelqRLSEELADLNAAIAGIEAkinELEEEKE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 572 THQKEIKA----LYTATEKLSKENESL---KSKLEHANKENSDVialwKSKLETAIASHQQAMEE----------LKVSF 634
Cdd:TIGR02169 445 DKALEIKKqewkLEQLAADLSKYEQELydlKEEYDRVEKELSKL----QRELAEAEAQARASEERvrggraveevLKASI 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 635 SKGLGT---------------ETAEFAELKTQIEKMRLDYQHEIENLQNQQ-------------DSERSAHAKEMEALRA 686
Cdd:TIGR02169 521 QGVHGTvaqlgsvgeryataiEVAAGNRLNNVVVEDDAVAKEAIELLKRRKagratflplnkmrDERRDLSILSEDGVIG 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 687 KLMKVIKEKE----------------NSLEAIKSKLDKAE----DQHLVE---------------------MEETLNKLQ 725
Cdd:TIGR02169 601 FAVDLVEFDPkyepafkyvfgdtlvvEDIEAARRLMGKYRmvtlEGELFEksgamtggsraprggilfsrsEPAELQRLR 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 726 EAEIKVK-ELEVLQAKCNEQTKVIDNFTSQLKATEEKLldlDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAES 804
Cdd:TIGR02169 681 ERLEGLKrELSSLQSELRRIENRLDELSQELSDASRKI---GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 805 SKASSITRELQGRELKLTNLQENL-------------------SEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQE 865
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALndlearlshsripeiqaelSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQE 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 866 TVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKER 945
Cdd:TIGR02169 838 LQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRK 917
|
730 740
....*....|....*....|....*.
gi 1622847176 946 YVEELQLKLTKANENASFLQKSIEDM 971
Cdd:TIGR02169 918 RLSELKAKLEALEEELSEIEDPKGED 943
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
880-1691 |
2.65e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 62.68 E-value: 2.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 880 LSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANE 959
Cdd:pfam02463 147 IAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 960 NASFLQKSIEDM--TLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLR 1037
Cdd:pfam02463 227 LYLDYLKLNEERidLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1038 KTLLDTEDKLKGAREENSGLLQEL-------EELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLK 1110
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELkkekeeiEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1111 LENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHY---EQEHLNKEVLAVEREKLLKEINVAQ 1187
Cdd:pfam02463 387 SSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESielKQGKLTEEKEELEKQELKLLKDELE 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1188 EELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEEL 1267
Cdd:pfam02463 467 LKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAIS 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1268 VKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLEtdmllHDQEKLNASLQAALQVKQLLRSE 1347
Cdd:pfam02463 547 TAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLE-----IDPILNLAQLDKATLEADEDDKR 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1348 ASGLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRI 1427
Cdd:pfam02463 622 AKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEI 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1428 ITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERensikaigdLKRQCD 1507
Cdd:pfam02463 702 KKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEK---------SELSLK 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1508 QESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCC 1587
Cdd:pfam02463 773 EKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLA 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1588 SEKNILLRDSLNLQEECQKLSEEIQEMQQSLI---LEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEK 1664
Cdd:pfam02463 853 EEELERLEEEITKEELLQELLLKEEELEEQKLkdeLESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLK 932
|
810 820
....*....|....*....|....*..
gi 1622847176 1665 FVLLQEKTKSEQEVAEIIEEKELLTAE 1691
Cdd:pfam02463 933 YEEEPEELLLEEADEKEKEENNKEEEE 959
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1019-1833 |
1.92e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.08 E-value: 1.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1019 EKATSETKTKHEEILQNLRKTLLDTEdkLKGAREENSGLLQELEELRKQADKaksLTYLLTSAKKEIELMSEELRGLKSE 1098
Cdd:TIGR02169 206 EREKAERYQALLKEKREYEGYELLKE--KEALERQKEAIERQLASLEEELEK---LTEEISELEKRLEEIEQLLEELNKK 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1099 -KQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVERE 1177
Cdd:TIGR02169 281 iKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYA 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1178 KLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQ----------IKKLITENF 1247
Cdd:TIGR02169 361 ELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEEladlnaaiagIEAKINELE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1248 ILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQ 1327
Cdd:TIGR02169 441 EEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASI 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1328 EKLNASLQAALQVK---QLLRSEASGLRAQ---LDDASKALRKAE-LETMQL-QATNTSLTKLLEEIKARRAVTDSECIQ 1399
Cdd:TIGR02169 521 QGVHGTVAQLGSVGeryATAIEVAAGNRLNnvvVEDDAVAKEAIElLKRRKAgRATFLPLNKMRDERRDLSILSEDGVIG 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1400 LLHE----------------KETLAASErrlLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTS-----EKE 1458
Cdd:TIGR02169 601 FAVDlvefdpkyepafkyvfGDTLVVED---IEAARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSrsepaELQ 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1459 MASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERK 1538
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1539 NENQELVASKCDLSLMLKEAQNAKKNLEKEHTHilQAKENLDAELNtccseknillrdslNLQEECQKLSEEIQEMQQSL 1618
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEARLSH--SRIPEIQAELS--------------KLEEEVSRIEARLREIEQKL 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1619 ileqEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAH 1698
Cdd:TIGR02169 822 ----NRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQ 897
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1699 IKTLKSdfaALSKSKAELQELHScltkilddlqlnHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFI 1778
Cdd:TIGR02169 898 LRELER---KIEELEAQIEKKRK------------RLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 1779 LQKEISQLAKTN-------SHISANLLESQNENRTLRKDKNKLTLKIRELETL--QSFTAAQTA 1833
Cdd:TIGR02169 963 VEEEIRALEPVNmlaiqeyEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKkrEVFMEAFEA 1026
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
405-1585 |
2.18e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 60.07 E-value: 2.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQ----------FRVEEESITKGDLETQTKlehARIKELEQSLL 474
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEkeikdlfdkyLEIDDEIIYINKLKLELK---EKIKNISDKNE 617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 475 FEKtKADKLQRELEDTrvatvseKSRIMELEKDLALRVQEVAELRRRLESNKPA-------GDVDmslSLLQEISSLQEK 547
Cdd:TIGR01612 618 YIK-KAIDLKKIIENN-------NAYIDELAKISPYQVPEHLKNKDKIYSTIKSelskiyeDDID---ALYNELSSIVKE 686
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 548 LEVTRTDHQREITSLKehfgAREETHQKEIKALYTATEKLSKENeslkskLEHANKENSDVIALWKSKLETAIASHQQAM 627
Cdd:TIGR01612 687 NAIDNTEDKAKLDDLK----SKIDKEYDKIQNMETATVELHLSN------IENKKNELLDIIVEIKKHIHGEINKDLNKI 756
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 628 EELKVSFSKGLGTETAEFAE-------LKTQIEKMRLDY--QHEIENLQNQ---QDSERSA-HAKEMEALRAKLMKVIKE 694
Cdd:TIGR01612 757 LEDFKNKEKELSNKINDYAKekdelnkYKSKISEIKNHYndQINIDNIKDEdakQNYDKSKeYIKTISIKEDEIFKIINE 836
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 695 KENSLEAIKSKLDK---AEDQHLVEME-------ETLNKLQeAEIKVKELEVLQAKCNEQTKVIDNFTsqlKATEEKLLD 764
Cdd:TIGR01612 837 MKFMKDDFLNKVDKfinFENNCKEKIDseheqfaELTNKIK-AEISDDKLNDYEKKFNDSKSLINEIN---KSIEEEYQN 912
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 765 LDALQKAS------SEGKSEMEKLR-QQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVS----- 832
Cdd:TIGR01612 913 INTLKKVDeyikicENTKESIEKFHnKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKDASlndye 992
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 833 QVKDTLEKELQILKEKFAEASEEAVSVQRSMQE-TVNKLHQKEEQFNMLSSDLEklrenLAEMEAKFREKDEREEQLIKA 911
Cdd:TIGR01612 993 AKNNELIKYFNDLKANLGKNKENMLYHQFDEKEkATNDIEQKIEDANKNIPNIE-----IAIHTSIYNIIDEIEKEIGKN 1067
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 912 KEKLENdiaEIMKMSGDNSSQLTKMNDELRLK--ERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEE 989
Cdd:TIGR01612 1068 IELLNK---EILEEAEINITNFNEIKEKLKHYnfDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENY 1144
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 990 KKELERKLSDLEKKMETshnqcqelkAGYEKATSETKTKHEEILQNLrktlldteDKLKGAREENSGLLQELEELRK--- 1066
Cdd:TIGR01612 1145 IDEIKAQINDLEDVADK---------AISNDDPEEIEKKIENIVTKI--------DKKKNIYDEIKKLLNEIAEIEKdkt 1207
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1067 --QADKAKSLTYLLTSAKKEIELMSEELRglKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALlqgdqqklwsvneTL 1144
Cdd:TIGR01612 1208 slEEVKGINLSYGKNLGKLFLEKIDEEKK--KSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEM-------------DI 1272
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1145 NLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLK---------EINVAQEELLKINME----NDSLQASKVSMQTLI 1211
Cdd:TIGR01612 1273 KAEMETFNISHDDDKDHHIISKKHDENISDIREKSLKiiedfseesDINDIKKELQKNLLDaqkhNSDINLYLNEIANIY 1352
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1212 EELQLSK-----DALIAKTEKDQEERDHLADQIKKLITenfILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKK 1286
Cdd:TIGR01612 1353 NILKLNKikkiiDEVKEYTKEIEENNKNIKDELDKSEK---LIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKN 1429
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1287 SALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLH--DQEKLNASLQAALQVKQLL--RSEASGLRAQLDDASKAL 1362
Cdd:TIGR01612 1430 HILSEESNIDTYFKNADENNENVLLLFKNIEMADNKSQHilKIKKDNATNDHDFNINELKehIDKSKGCKDEADKNAKAI 1509
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1363 RK-AELETMQLQATNTSLTKLLE-EIKARRAVTDSECIQLLHEKETlAASERRLLAEKEElLSENRIITEKLhKCSEEAA 1440
Cdd:TIGR01612 1510 EKnKELFEQYKKDVTELLNKYSAlAIKNKFAKTKKDSEIIIKEIKD-AHKKFILEAEKSE-QKIKEIKKEKF-RIEDDAA 1586
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1441 HTEMSLNEKITYLTSEKEMASQ--KMTKLKKHQDSLLKEKSALETQNGVL-LAERENSIKAIGDLKRQCDQ--ES-ANRR 1514
Cdd:TIGR01612 1587 KNDKSNKAAIDIQLSLENFENKflKISDIKKKINDCLKETESIEKKISSFsIDSQDTELKENGDNLNSLQEflESlKDQK 1666
|
1210 1220 1230 1240 1250 1260 1270
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 1515 IIVQENMKLLGNIDAlkkELQERKNE-NQELVASKCDLSLMLKEAQNAKKN-LEKEHTHILQAKENLDAELNT 1585
Cdd:TIGR01612 1667 KNIEDKKKELDELDS---EIEKIEIDvDQHKKNYEIGIIEKIKEIAIANKEeIESIKELIEPTIENLISSFNT 1736
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
883-1788 |
6.75e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 6.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 883 DLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENdiaeimkmsgdnssqltkmNDELRLKERYVE--ELQLKLTKANEN 960
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAER-------------------YQALLKEKREYEgyELLKEKEALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 961 ASFLQKSIEDMTLKAEQSQqeaaekheeekkeleRKLSDLEKKMEtshnqcqELKAGYEKATSETKTKHEEILQNLRKTL 1040
Cdd:TIGR02169 239 KEAIERQLASLEEELEKLT---------------EEISELEKRLE-------EIEQLLEELNKKIKDLGEEEQLRVKEKI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1041 LDTEDKLKGAREENSGLLQELEELRKQADKAKsltylltsakkeielmsEELRGLKSEKQLLSQEGNDLKLENGSLLSKL 1120
Cdd:TIGR02169 297 GELEAEIASLERSIAEKERELEDAEERLAKLE-----------------AEIDKLLAEIEELEREIEEERKRRDKLTEEY 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1121 VELEAKIALLQGDQQklwsvnetlnlEKEKFLEEKQDAEKHYEQEhlnKEVLAVEREKLLKEINVAQEELLKINMENDSL 1200
Cdd:TIGR02169 360 AELKEELEDLRAELE-----------EVDKEFAETRDELKDYREK---LEKLKREINELKRELDRLQEELQRLSEELADL 425
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1201 QASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLitenfilakdkDDIIQKLQSSYEELVKDQKALVQDIED 1280
Cdd:TIGR02169 426 NAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKY-----------EQELYDLKEEYDRVEKELSKLQRELAE 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1281 LTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQletdmllhdqeKLNASLQAALQVkqllrseASGLRAQ---LDD 1357
Cdd:TIGR02169 495 AEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLG-----------SVGERYATAIEV-------AAGNRLNnvvVED 556
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1358 ASKALRKAE-LETMQL-QATNTSLTKLLEEIKARRAVTDSECIQLLHE----------------KETLAASErrlLAEKE 1419
Cdd:TIGR02169 557 DAVAKEAIElLKRRKAgRATFLPLNKMRDERRDLSILSEDGVIGFAVDlvefdpkyepafkyvfGDTLVVED---IEAAR 633
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1420 ELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTS-----EKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAEREN 1494
Cdd:TIGR02169 634 RLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSrsepaELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD 713
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1495 SIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTH-IL 1573
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHsRI 793
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1574 QAKENLDAELNTCCSEKNILLRD---SLN-LQEECQKLSEEIQEMQQSLILEQEARAKEKEsslyENNQLHGRMVLLEQE 1649
Cdd:TIGR02169 794 PEIQAELSKLEEEVSRIEARLREieqKLNrLTLEKEYLEKEIQELQEQRIDLKEQIKSIEK----EIENLNGKKEELEEE 869
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1650 VEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEA-------AQLAAHIKTLKSDFAALSKSKAELQELHSC 1722
Cdd:TIGR02169 870 LEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIekkrkrlSELKAKLEALEEELSEIEDPKGEDEEIPEE 949
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847176 1723 lTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAK 1788
Cdd:TIGR02169 950 -ELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
401-941 |
1.29e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.23 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 401 QHVLELEAKMDQLRTMVEAADR--EKVELLNQLEEEKRK--VEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFE 476
Cdd:COG4913 242 EALEDAREQIELLEPIRELAERyaAARERLAELEYLRAAlrLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 477 KTKADKLQRELEDtrvatvSEKSRIMELEKDLALRVQEVAELRRRLESnkpagdvdmslsLLQEISSLQEKLEVTR---T 553
Cdd:COG4913 322 REELDELEAQIRG------NGGDRLEQLEREIERLERELEERERRRAR------------LEALLAALGLPLPASAeefA 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 554 DHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEH--ANKEN--SDVIALwKSKLETAIASHQQAM-- 627
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASleRRKSNipARLLAL-RDALAEALGLDEAELpf 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 628 --EELKV---------SFSKGLGT-------ETAEFAELKTQIE----KMRLDYQHEIENLQNQQDSERSAHAkemeaLR 685
Cdd:COG4913 463 vgELIEVrpeeerwrgAIERVLGGfaltllvPPEHYAAALRWVNrlhlRGRLVYERVRTGLPDPERPRLDPDS-----LA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 686 AKLmkVIKEKENSlEAIKSKLDKAEDQHLVEMEETLNKLQEA------------------------------------EI 729
Cdd:COG4913 538 GKL--DFKPHPFR-AWLEAELGRRFDYVCVDSPEELRRHPRAitragqvkgngtrhekddrrrirsryvlgfdnraklAA 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 730 KVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSE-----------------------GKSEMEKLRQQL 786
Cdd:COG4913 615 LEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDeidvasaereiaeleaelerldaSSDDLAALEEQL 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 787 EAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELqiLKEKFAEASEEAV------SVQ 860
Cdd:COG4913 695 EELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LEERFAAALGDAVerelreNLE 772
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 861 RSMQETVNKLHQKEEQ-----------FNMLSSD--------------LEKLREN-LAEMEAKFRE-KDEREEQLIKA-K 912
Cdd:COG4913 773 ERIDALRARLNRAEEEleramrafnreWPAETADldadleslpeylalLDRLEEDgLPEYEERFKElLNENSIEFVADlL 852
|
650 660
....*....|....*....|....*....
gi 1622847176 913 EKLENDIAEImkmsgdnSSQLTKMNDELR 941
Cdd:COG4913 853 SKLRRAIREI-------KERIDPLNDSLK 874
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
736-962 |
1.29e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 736 VLQAKCNEQTKVIDNFTSQLKATEEKlldLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 815
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQE---IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 816 GRELKLTNLQENLSE----VSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL 891
Cdd:COG4942 87 ELEKEIAELRAELEAqkeeLAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847176 892 AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENAS 962
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2170-2186 |
1.59e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.59e-07
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1557-2053 |
1.76e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 56.65 E-value: 1.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1557 EAQNAKKNLEKEHtHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEE----IQEMQQSLILEQEARAKEKESS 1632
Cdd:pfam05483 280 QDENLKELIEKKD-HLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEkeaqMEELNKAKAAHSFVVTEFEATT 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1633 LYENNQLHGRMVLLEQEVEELRVCTEELQsEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKS 1712
Cdd:pfam05483 359 CSLEELLRTEQQRLEKNEDQLKIITMELQ-KKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGK 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1713 KAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLaktnsh 1792
Cdd:pfam05483 438 EQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDM------ 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1793 isanLLESQNENRTLRKDKNKLTLKIRELETLQSfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1872
Cdd:pfam05483 512 ----TLELKKHQEDIINCKKQEERMLKQIENLEE-KEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKE 586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1873 ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshQKLEEERSVLN 1952
Cdd:pfam05483 587 KQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK------QKFEEIIDNYQ 660
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1953 NQlLEMKKSLPSNTLRESKFIKDADEEKASLQKSISI-TSALLTEKDAELEKLRNEVTVLRGENASAKSLH-SVVQTLES 2030
Cdd:pfam05483 661 KE-IEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKrCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYkNKEQEQSS 739
|
490 500
....*....|....*....|...
gi 1622847176 2031 DKVKLELKVKNLELQLKENKRQL 2053
Cdd:pfam05483 740 AKAALEIELSNIKAELLSLKKQL 762
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
338-923 |
1.77e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 1.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 338 ETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDqhvleleakmdqlrtmV 417
Cdd:PRK02224 241 EVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAG----------------L 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 418 EAADREKVELlnQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSE 497
Cdd:PRK02224 305 DDADAEAVEA--RREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDR 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 498 KSRIMELEKdlalrvqEVAELRRRLESnkpagdvdmslsllqeisslqekLEVTRTDHQREITSLKEhfgAREETHQKEi 577
Cdd:PRK02224 383 REEIEELEE-------EIEELRERFGD-----------------------APVDLGNAEDFLEELRE---ERDELRERE- 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 578 kalytateklsKENESLKSKLEHANKENSDVIALWKSK---LETAIASHQQAMEELKVSfskgLGTETAEFAELKTQIEK 654
Cdd:PRK02224 429 -----------AELEATLRTARERVEEAEALLEAGKCPecgQPVEGSPHVETIEEDRER----VEELEAELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 655 MrldyQHEIENLQNQQDSERsaHAKEMEALRAKLMKVIKEKENSLEAIKSK---LDKAEDQHLVEMEETLNKLQEAEIKV 731
Cdd:PRK02224 494 V----EERLERAEDLVEAED--RIERLEERREDLEELIAERRETIEEKRERaeeLRERAAELEAEAEEKREAAAEAEEEA 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 732 KElevlqakCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEaaekQIKHLEIEKNAESSKASSIT 811
Cdd:PRK02224 568 EE-------AREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKRE----ALAELNDERRERLAEKRERK 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 812 RELQGR--ELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQEtVNKLHQKEEQFNMLSSDLEKLRE 889
Cdd:PRK02224 637 RELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEE-LEELRERREALENRVEALEALYD 715
|
570 580 590
....*....|....*....|....*....|....*
gi 1622847176 890 NLAEMEAKFRE-KDEREEQLIKAKEKLENDIAEIM 923
Cdd:PRK02224 716 EAEELESMYGDlRAELRQRNVETLERMLNETFDLV 750
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
567-1125 |
1.90e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 1.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 567 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELkvsfskglgtetaefA 646
Cdd:PRK02224 191 QLKAQIEEKEEKDLHERLNGLESELAELDEEIERYE-EQREQARETRDEADEVLEEHEERREEL---------------E 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 647 ELKTQIEKMRLDYQheienlqnQQDSERSAHAKEMEALRAKLMKVIKEKENSLEaiKSKLDKAEDQHLVEMEETLNklqe 726
Cdd:PRK02224 255 TLEAEIEDLRETIA--------ETEREREELAEEVRDLRERLEELEEERDDLLA--EAGLDDADAEAVEARREELE---- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 727 aeikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNA 802
Cdd:PRK02224 321 -----DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeeLREEAAELESELEEAREAVEDRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 803 ESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASE--EAVSVQRSMQET-----VNKLHQKEE 875
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllEAGKCPECGQPVegsphVETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 876 QFNMLSSDLEKLRENLAEMEAKFrekdEREEQLIKAKEKLENdiaeimkmSGDNSSQLTKMNDElrlKERYVEELQLKLT 955
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIER--------LEERREDLEELIAE---RRETIEEKRERAE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 956 KANENASFLQKSIEDmtlkaeqsQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEK-ATSETKTKHEEILQ 1034
Cdd:PRK02224 541 ELRERAAELEAEAEE--------KREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLlAAIADAEDEIERLR 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1035 NLRKTLLDTED----KLKGAREENSGLLQELEELRKQADKAKsltylLTSAKKEIELMSEELRGLKSEKqllsqegNDLK 1110
Cdd:PRK02224 613 EKREALAELNDerreRLAEKRERKRELEAEFDEARIEEARED-----KERAEEYLEQVEEKLDELREER-------DDLQ 680
|
570
....*....|....*
gi 1622847176 1111 LENGSLLSKLVELEA 1125
Cdd:PRK02224 681 AEIGAVENELEELEE 695
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
780-1567 |
2.24e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.52 E-value: 2.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 780 EKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSV 859
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 860 QRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKmsgdnssQLTKMNDE 939
Cdd:pfam02463 278 EKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK-------ELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 940 LRLKERYVEELQLKLTKANENASFLQKSIEDmtLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYE 1019
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKL--ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1020 KATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLltsaKKEIELMSEELRGLKSEK 1099
Cdd:pfam02463 429 LEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL----ELLLSRQKLEERSQKESK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1100 QLLSQEGNDLKLENG-SLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREK 1178
Cdd:pfam02463 505 ARSGLKVLLALIKDGvGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1179 LLKEINVAQEELLKINMENDSLQASKVSMqtliEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQ 1258
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDKATL----EADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1259 KLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAAL 1338
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKL 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1339 QVKQLLRSEASGLRAQLDDASKALRKAELETMQLQA-----TNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERR 1413
Cdd:pfam02463 741 LKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELaeereKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEE 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1414 LLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERE 1493
Cdd:pfam02463 821 QLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKK 900
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 1494 NSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEK 1567
Cdd:pfam02463 901 ELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGK 974
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1141-2097 |
2.31e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 2.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1141 NETLNLEK-EKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASK--VSMQTLIEELQLS 1217
Cdd:PTZ00121 1021 NQNFNIEKiEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEdnRADEATEEAFGKA 1100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1218 KDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDN 1297
Cdd:PTZ00121 1101 EEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEA 1180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1298 TCIALKVERDNALQNNRDLQLETDMLLHDQEKL---------NASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELE 1368
Cdd:PTZ00121 1181 ARKAEEVRKAEELRKAEDARKAEAARKAEEERKaeearkaedAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEA 1260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1369 TMQLQATNTSLTKLLEEIKARRAVTDSEciqlLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNE 1448
Cdd:PTZ00121 1261 RMAHFARRQAAIKAEEARKADELKKAEE----KKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKK 1336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1449 KITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQngvllaeRENSIKAIGDLKRQCDQESanrriivqenmkllgNID 1528
Cdd:PTZ00121 1337 KAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK-------KEEAKKKADAAKKKAEEKK---------------KAD 1394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1529 ALKKELQERKNENQELvaskcdlslmlKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKnillrdslnlQEECQKLS 1608
Cdd:PTZ00121 1395 EAKKKAEEDKKKADEL-----------KKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK----------ADEAKKKA 1453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1609 EEIQEMQQsliLEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKfvllQEKTKSEqevaeiieekELL 1688
Cdd:PTZ00121 1454 EEAKKAEE---AKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA----EAKKKAD----------EAK 1516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1689 TAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKIlDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKE 1768
Cdd:PTZ00121 1517 KAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKA-EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1769 KEMLAESYFILQKEISQLAKTNSHISANLLESQNENRtlrkdKNKLTLKIRELETLQSFTAAQTAEDAMQI-MEQMTKEK 1847
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEK-----KKVEQLKKKEAEEKKKAEELKKAEEENKIkAAEEAKKA 1670
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1848 TETLASLEDTK--QTNAKLQNELDTLKENNLKNVEELNKSKElltVENQKMEEFRKEIETLKQaaaqKSQQLSALQEENV 1925
Cdd:PTZ00121 1671 EEDKKKAEEAKkaEEDEKKAAEALKKEAEEAKKAEELKKKEA---EEKKKAEELKKAEEENKI----KAEEAKKEAEEDK 1743
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1926 KLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASlqKSISITSALLTEKDAELEKLR 2005
Cdd:PTZ00121 1744 KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI--KDIFDNFANIIEGGKEGNLVI 1821
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 2006 NEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRqlSSSSGNTDTQADEDERAQESqQMIDFLNSVIV 2085
Cdd:PTZ00121 1822 NDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKE--ADFNKEKDLKEDDEEEIEEA-DEIEKIDKDDI 1898
|
970
....*....|..
gi 1622847176 2086 DLQRKNQDLKMK 2097
Cdd:PTZ00121 1899 EREIPNNNMAGK 1910
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1112-1786 |
2.50e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 2.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1112 ENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELL 1191
Cdd:TIGR00618 164 EKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1192 KINMENDSLQASKVSMQTLIEELQLSKD--ALIAKTEKDQEERDhLADQIKKLITENFILA---KDKDDIIQKLQSSYEE 1266
Cdd:TIGR00618 244 YLTQKREAQEEQLKKQQLLKQLRARIEElrAQEAVLEETQERIN-RARKAAPLAAHIKAVTqieQQAQRIHTELQSKMRS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1267 LVK---------DQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAA 1337
Cdd:TIGR00618 323 RAKllmkraahvKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKEL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1338 LQVKQL------LRSEASGLRAQLDDASKA--LRKAELETMQLQATNTSLTKLLEEIKARRAVTD-SECIQLLHEKETLA 1408
Cdd:TIGR00618 403 DILQREqatidtRTSAFRDLQGQLAHAKKQqeLQQRYAELCAAAITCTAQCEKLEKIHLQESAQSlKEREQQLQTKEQIH 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1409 ASERRLLAEKEELLSENRIITEKLHK-CSEEAAHTEMSLN------------EKITYLTSEKEMASQKMTKLKKHQDSLl 1475
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEEPCPLCGsCIHPNPARQDIDNpgpltrrmqrgeQTYAQLETSEEDVYHQLTSERKQRASL- 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1476 KEKSALETQNGVLLAERENSIKAIGDLKRQCDQESanrRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLML 1555
Cdd:TIGR00618 562 KEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRL---QDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCS 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1556 KEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSL--NLQEECQKLSEEIQEMQQSLILEQEARAKEKESSL 1633
Cdd:TIGR00618 639 QELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLAlqKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1634 YEN---NQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALS 1710
Cdd:TIGR00618 719 EFNeieNASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDT 798
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847176 1711 KSKAELQELHSclTKILDDLQLnHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQL 1786
Cdd:TIGR00618 799 HLLKTLEAEIG--QEIPSDEDI-LNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKI 871
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
345-1137 |
2.51e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 56.27 E-value: 2.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAE-VAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADRE 423
Cdd:pfam05483 42 QKLNFLPMLEQVANSGDCHYQEGLKDSDFENSEgLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 424 KVELlnQLEEEKrkvedLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVAtvseksrIME 503
Cdd:pfam05483 122 IQEL--QFENEK-----VSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQV-------YMD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 504 LEKDLALRVQEVAELRRRLESNKpagdVDMSLSLLQE---ISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKAL 580
Cdd:pfam05483 188 LNNNIEKMILAFEELRVQAENAR----LEMHFKLKEDhekIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 581 YTATEKLSKENESLKSKLEHANKENSDVIALWKSkletaiashqqaMEELKVSFSKGLGTETAEFAELKTQIEKMrldyq 660
Cdd:pfam05483 264 EESRDKANQLEEKTKLQDENLKELIEKKDHLTKE------------LEDIKMSLQRSMSTQKALEEDLQIATKTI----- 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 661 heienlqNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKSKLdKAEDQHLVEMEETLNKL-QEAEIKVKELEVLQA 739
Cdd:pfam05483 327 -------CQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELL-RTEQQRLEKNEDQLKIItMELQKKSSELEEMTK 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 740 KCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAE-------SSKASSITR 812
Cdd:pfam05483 399 FKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIktseehyLKEVEDLKT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 813 ELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLA 892
Cdd:pfam05483 479 ELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFI 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 893 EMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKmndELRLKERYVEELQLKLTKANENASFLQKSIEDMT 972
Cdd:pfam05483 559 QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK---QIENKNKNIEELHQENKALKKKGSAENKQLNAYE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 973 LKAEQsqqeaaekheeekkelerklsdLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGARE 1052
Cdd:pfam05483 636 IKVNK----------------------LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKE 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1053 ENSGLLQELEELRKQADKAKSltylltSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQG 1132
Cdd:pfam05483 694 IDKRCQHKIAEMVALMEKHKH------QYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKE 767
|
....*
gi 1622847176 1133 DQQKL 1137
Cdd:pfam05483 768 EKEKL 772
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1445-1907 |
2.99e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.80 E-value: 2.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1445 SLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQngvLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKll 1524
Cdd:TIGR04523 208 KKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTE---ISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKK-- 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1525 gnIDALKKELQERKNENQELVASK-CDLSLMLK-EAQNAKKNLEKEHTHILQAKENLDaELNtccSEKNILLRDSLNLQE 1602
Cdd:TIGR04523 283 --IKELEKQLNQLKSEISDLNNQKeQDWNKELKsELKNQEKKLEEIQNQISQNNKIIS-QLN---EQISQLKKELTNSES 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1603 ECQKLSEEIQEMQQSLILEQearaKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEII 1682
Cdd:TIGR04523 357 ENSEKQRELEEKQNEIEKLK----KENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1683 EEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEK 1762
Cdd:TIGR04523 433 ETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1763 DELLKEKEMLAESYFILQKEISQLAKTNSHISANL--LESQNENRTLRKDKNKLTLKIREL-ETLQSFTAAQTAEDamQI 1839
Cdd:TIGR04523 513 KDLTKKISSLKEKIEKLESEKKEKESKISDLEDELnkDDFELKKENLEKEIDEKNKEIEELkQTQKSLKKKQEEKQ--EL 590
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 1840 MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLK 1907
Cdd:TIGR04523 591 IDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
711-1480 |
4.10e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 55.61 E-value: 4.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 711 DQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNfTSQLKATEEK--LLDLDALQKASSEgKSEMEKLRQQLEA 788
Cdd:pfam12128 175 ESPLRHIDKIAKAMHSKEGKFRDVKSMIVAILEDDGVVPP-KSRLNRQQVEhwIRDIQAIAGIMKI-RPEFTKLQQEFNT 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 789 AEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL----SEVSQVKDTLEKELQILKEKFAEASEEAVSVQ---- 860
Cdd:pfam12128 253 LESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLrtldDQWKEKRDELNGELSAADAAVAKDRSELEALEdqhg 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 861 RSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR---EKDEREEQLIKA---------KEKLENDIAEIMKMSGD 928
Cdd:pfam12128 333 AFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQdvtAKYNRRRSKIKEqnnrdiagiKDKLAKIREARDRQLAV 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 929 NSSQLTKMNDELRlkeryvEELQLKLTKANENASFLQKSIEDMTLKAEQSQqeaaekheeekkelerKLSDLEKKMETSH 1008
Cdd:pfam12128 413 AEDDLQALESELR------EQLEAGKLEFNEEEYRLKSRLGELKLRLNQAT----------------ATPELLLQLENFD 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1009 NQCQELKAGYEKATSETKTKHEEILQnLRKTLLDTEDKLKGAREENSGLLQELEELRKQAD-KAKSLTYLLtsaKKEIEL 1087
Cdd:pfam12128 471 ERIERAREEQEAANAEVERLQSELRQ-ARKRRDQASEALRQASRRLEERQSALDELELQLFpQAGTLLHFL---RKEAPD 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1088 MSEELRGLKSEKQLLSQEgNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHL 1167
Cdd:pfam12128 547 WEQSIGKVISPELLHRTD-LDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEE 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1168 NKEVLAVEREKLLKEinvaqEELLKINMENDSLQASKVSMQTLIEELQLSKdALIAKTEKDQEERDHLADQIKKLITENF 1247
Cdd:pfam12128 626 QLVQANGELEKASRE-----ETFARTALKNARLDLRRLFDEKQSEKDKKNK-ALAERKDSANERLNSLEAQLKQLDKKHQ 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1248 ILAKDKDDiiQKLQSSYEELVKdQKALVQDIEDLTAEKKSALEKL-SNLDNTCIALKVERDNAL-------QNNRDLQLE 1319
Cdd:pfam12128 700 AWLEEQKE--QKREARTEKQAY-WQVVEGALDAQLALLKAAIAARrSGAKAELKALETWYKRDLaslgvdpDVIAKLKRE 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1320 TDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLddaskALRKAELETMQLQaTNTSLTKLLEEIKARRAvtdseciQ 1399
Cdd:pfam12128 777 IRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRL-----ATQLSNIERAISE-LQQQLARLIADTKLRRA-------K 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1400 LLHEKETLAASERRLLAEKEELLSENRIITE-KLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEK 1478
Cdd:pfam12128 844 LEMERKASEKQQVRLSENLRGLRCEMSKLATlKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADH 923
|
..
gi 1622847176 1479 SA 1480
Cdd:pfam12128 924 SG 925
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
775-1618 |
4.62e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.51 E-value: 4.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 775 GKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElqgrelKLTNLQENLSEVSQVKDTLEKelqiLKEKFAEASE 854
Cdd:pfam15921 72 GKEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQ------SVIDLQTKLQEMQMERDAMAD----IRRRESQSQE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 855 EavsVQRSMQETVNKLHQ----KEEQFNMLSSDLEKLRENLAEMEAKFRE-----KDEREEQLIKAKEKLENDIAEIMKM 925
Cdd:pfam15921 142 D---LRNQLQNTVHELEAakclKEDMLEDSNTQIEQLRKMMLSHEGVLQEirsilVDFEEASGKKIYEHDSMSTMHFRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 926 SGDNSSQLTKMNDELR-LKERYV---EELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLE 1001
Cdd:pfam15921 219 GSAISKILRELDTEISyLKGRIFpveDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1002 KKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLkgareensgllqelEELRKQadkaksltylltsa 1081
Cdd:pfam15921 299 SQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKI--------------EELEKQ-------------- 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1082 kkeIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDaeKH 1161
Cdd:pfam15921 351 ---LVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDD--RN 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1162 YEQEHLNKEVLAV------EREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALiaktekDQEERDhL 1235
Cdd:pfam15921 426 MEVQRLEALLKAMksecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTL------ESSERT-V 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1236 ADQIKKLitenfilaKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKksalEKLSNLDNTCIALKV---ERDNALQN 1312
Cdd:pfam15921 499 SDLTASL--------QEKERAIEATNAEITKLRSRVDLKLQELQHLKNEG----DHLRNVQTECEALKLqmaEKDKVIEI 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1313 NRDlQLETDMLLHDQEKLNAslqAALQVKqllrseasglRAQLDdasKALRKAELETMQLQATNTSLTKLLEEIKARRAV 1392
Cdd:pfam15921 567 LRQ-QIENMTQLVGQHGRTA---GAMQVE----------KAQLE---KEINDRRLELQEFKILKDKKDAKIRELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1393 TDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKitylTSEKEMASQKMT-KLKKHQ 1471
Cdd:pfam15921 630 LELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNK----SEEMETTTNKLKmQLKSAQ 705
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1472 DSLLKEKSALETQNGvllaERENSIKAIGDLKRQCdqeSANRriivqenmkllGNIDALKKELQerknenqelvaskcdl 1551
Cdd:pfam15921 706 SELEQTRNTLKSMEG----SDGHAMKVAMGMQKQI---TAKR-----------GQIDALQSKIQ---------------- 751
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 1552 slMLKEAQNakkNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSL 1618
Cdd:pfam15921 752 --FLEEAMT---NANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVAL 813
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1731-2022 |
5.18e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 5.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1731 QLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKD 1810
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1811 KNKLTLKIRELETLQSFTAAQTAEDAMQI------MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNK 1884
Cdd:COG1196 304 IARLEERRRELEERLEELEEELAELEEELeeleeeLEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1885 SKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEmkkslps 1964
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE------- 456
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 1965 NTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLH 2022
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1752-2100 |
5.51e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.08 E-value: 5.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1752 LAEKSEMMLEKDELLKEKEMLAESYFILQkeiSQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAq 1831
Cdd:COG5022 805 LLGSRKEYRSYLACIIKLQKTIKREKKLR---ETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELA- 880
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1832 taedamqimEQMTKEKTETLASLEDTKQTNAKLQNEL---------DTLKENNLKNvEELNKSKELLT---VENQKMEEF 1899
Cdd:COG5022 881 ---------ERQLQELKIDVKSISSLKLVNLELESEIielkkslssDLIENLEFKT-ELIARLKKLLNnidLEEGPSIEY 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1900 RK-----EIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLR------ 1968
Cdd:COG5022 951 VKlpelnKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEvaelqs 1030
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1969 ESKFIKDADEEKASLQKSISITSALLtekdAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKL-ELKVKNLELqlk 2047
Cdd:COG5022 1031 ASKIISSESTELSILKPLQKLKGLLL----LENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLkTINVKDLEV--- 1103
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 2048 eNKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEM 2100
Cdd:COG5022 1104 -TNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLE 1155
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
429-960 |
6.11e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.64 E-value: 6.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 429 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEkdl 508
Cdd:TIGR04523 47 NELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLE--- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 509 alrvQEVAELRRRLESNKPAGDVDmslslLQEISSLQEKLEVTRTDHQREItslkehfgarEETHQKEIKALYTATEKLS 588
Cdd:TIGR04523 124 ----VELNKLEKQKKENKKNIDKF-----LTEIKKKEKELEKLNNKYNDLK----------KQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 589 KENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEIENLQN 668
Cdd:TIGR04523 185 IQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT----QTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 669 QQDSE-RSAHAKEMEALRAKlmKVIKEKENSLEAIKSKLDKAEDQHlvemEETLNKLQEAEIKVKE--LEVLQAKCNEQT 745
Cdd:TIGR04523 261 EQNKIkKQLSEKQKELEQNN--KKIKELEKQLNQLKSEISDLNNQK----EQDWNKELKSELKNQEkkLEEIQNQISQNN 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 746 KVIDNFTSQLKATEEKLLDLDA----LQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKL 821
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTNSESenseKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQI 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 822 TNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREK 901
Cdd:TIGR04523 415 KKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSK 494
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 902 DEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANEN 960
Cdd:TIGR04523 495 EKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFE 553
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
777-980 |
7.77e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 7.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 777 SEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEA 856
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 857 VSVQRSMQETVNKLHQKEEQ----FNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 932
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622847176 933 LTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 980
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
883-1543 |
9.32e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.30 E-value: 9.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 883 DLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENAS 962
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 963 FLQKSiedmtlkaeqsqqeaaekheeekkelERKLSDLEKKMEtshnqcqelkagyekatsetktKHEEILQNLRKTLLD 1042
Cdd:PRK03918 239 EIEEL--------------------------EKELESLEGSKR----------------------KLEEKIRELEERIEE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1043 TEDKLKgAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVE 1122
Cdd:PRK03918 271 LKKEIE-ELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKE 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1123 LEAKIALLQGDQQKLWSVnetlnLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKllKEInvaQEELLKINMENDSLQA 1202
Cdd:PRK03918 350 LEKRLEELEERHELYEEA-----KAKKEELERLKKRLTGLTPEKLEKELEELEKAK--EEI---EEEISKITARIGELKK 419
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1203 SKVSMQTLIEELQLSKDAL-IAKTEKDQEERDHLADQIKKLITEnfiLAKDKDDIIQKLQSSYEELVKDQKALVQDIEDL 1281
Cdd:PRK03918 420 EIKELKKAIEELKKAKGKCpVCGRELTEEHRKELLEEYTAELKR---IEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1282 TaeKKSALEKLSNLDNTCIALKVERdnaLQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKa 1361
Cdd:PRK03918 497 K--LKELAEQLKELEEKLKKYNLEE---LEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEE- 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1362 lRKAELETMQLQATNTSLTKLLEEIKarravtdsECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAH 1441
Cdd:PRK03918 571 -ELAELLKELEELGFESVEELEERLK--------ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKR 641
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1442 TEMSLNE----KITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQngvllaeRENSIKAIGDLKRQCDQ-ESANRRII 1516
Cdd:PRK03918 642 LEELRKEleelEKKYSEEEYEELREEYLELSRELAGLRAELEELEKR-------REEIKKTLEKLKEELEErEKAKKELE 714
|
650 660
....*....|....*....|....*..
gi 1622847176 1517 VQEnmKLLGNIDALKKELQERKNENQE 1543
Cdd:PRK03918 715 KLE--KALERVEELREKVKKYKALLKE 739
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1119-1996 |
9.65e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.21 E-value: 9.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1119 KLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMEND 1198
Cdd:pfam02463 168 KRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLR 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1199 SLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDI 1278
Cdd:pfam02463 248 DEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1279 EDLTAEKKSALEKLsnldntcIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDA 1358
Cdd:pfam02463 328 KELKKEKEEIEELE-------KELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1359 SKALRKAELEtMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEE 1438
Cdd:pfam02463 401 SEEEKEAQLL-LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQL 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1439 AAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQ 1518
Cdd:pfam02463 480 VKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADE 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1519 ENMKLLgNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSL 1598
Cdd:pfam02463 560 VEERQK-LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLK 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1599 NLQEECQKLSEEIQEMQQSLILEQEARAKEKES-SLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQE 1677
Cdd:pfam02463 639 ESAKAKESGLRKGVSLEEGLAEKSEVKASLSELtKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1678 VAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSE 1757
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKA 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1758 MMLEKDELLKEKEMLAESYFILQKEISQL-AKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDA 1836
Cdd:pfam02463 799 QEEELRALEEELKEEAELLEEEQLLIEQEeKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEE 878
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1837 MQIMEQMTKEKTETLASLEDTKQTNAKLQnELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQ 1916
Cdd:pfam02463 879 LEEQKLKDELESKEEKEKEEKKELEEESQ-KLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEE 957
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1917 lsalQEENVKLAEelgrsrdevtshQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTE 1996
Cdd:pfam02463 958 ----EEERNKRLL------------LAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKE 1021
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1314-2069 |
1.36e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.97 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1314 RDLQ--LETDMLLHDQEKLN-----ASLQAALQVKQLLRSEASGLRAQLDDASKALRKaeletmQLQATntsltklLEEI 1386
Cdd:pfam15921 88 KDLQrrLNESNELHEKQKFYlrqsvIDLQTKLQEMQMERDAMADIRRRESQSQEDLRN------QLQNT-------VHEL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1387 KARRAVTDSeciqLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNekITYLTSEKEMASQKMTK 1466
Cdd:pfam15921 155 EAAKCLKED----MLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMS--TMHFRSLGSAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1467 LKKHQDSLLKEKSALETQNGVLLAERENSIKAIgdLKRQCDQEsanRRIIVQENMKLLG-------------NIDALKKE 1533
Cdd:pfam15921 229 LDTEISYLKGRIFPVEDQLEALKSESQNKIELL--LQQHQDRI---EQLISEHEVEITGltekassarsqanSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1534 LQER-KNENQELVASKCDL----SLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLS 1608
Cdd:pfam15921 304 IQEQaRNQNSMYMRQLSDLestvSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLL 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1609 EEIQEMQQSLILEQEARAKEKESSLYEN---NQLHGRMVLLEQEVEELRVCTEELQSE-------KFVLLQEKTKSEQEV 1678
Cdd:pfam15921 384 ADLHKREKELSLEKEQNKRLWDRDTGNSitiDHLRRELDDRNMEVQRLEALLKAMKSEcqgqmerQMAAIQGKNESLEKV 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1679 ----AEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQE-------LHSCLTKILD--DLQLNHEVTLAEKAQVM 1745
Cdd:pfam15921 464 ssltAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEkeraieaTNAEITKLRSrvDLKLQELQHLKNEGDHL 543
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1746 QDNQNLLAEKSEMMLEKDELLKekemlaesyfILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQ 1825
Cdd:pfam15921 544 RNVQTECEALKLQMAEKDKVIE----------ILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILK 613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1826 SFTAAQTAEDAMQIME------QMTKEKTETLASLEDTKQTNAKLQNELDTLKeNNLKNVEE---------LNKSKELLT 1890
Cdd:pfam15921 614 DKKDAKIRELEARVSDlelekvKLVNAGSERLRAVKDIKQERDQLLNEVKTSR-NELNSLSEdyevlkrnfRNKSEEMET 692
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1891 VENQKMEEFRKEIETLKQAAaQKSQQLSALQEENVKLAeeLGRSRDEVTSHQKLEEERSVLnnQLLEMKKSlpsNTLRES 1970
Cdd:pfam15921 693 TTNKLKMQLKSAQSELEQTR-NTLKSMEGSDGHAMKVA--MGMQKQITAKRGQIDALQSKI--QFLEEAMT---NANKEK 764
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1971 KFIKdadEEKASLQKSISITSallTEKDaeleKLRNEVTVLRgenasakslhsvvqtleSDKVKLELKVKNLELQLKENK 2050
Cdd:pfam15921 765 HFLK---EEKNKLSQELSTVA---TEKN----KMAGELEVLR-----------------SQERRLKEKVANMEVALDKAS 817
|
810
....*....|....*....
gi 1622847176 2051 RQLSSSSGNTDTQADEDER 2069
Cdd:pfam15921 818 LQFAECQDIIQRQEQESVR 836
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
776-1294 |
1.46e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 776 KSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKD---TLEKELQilkekfaea 852
Cdd:PRK03918 178 IERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEeieELEKELE--------- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 853 seeavSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEaKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 932
Cdd:PRK03918 249 -----SLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 933 LT---KMNDELRLKERYVEELQLKLTKANENASFLQKSI---EDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMET 1006
Cdd:PRK03918 323 INgieERIKELEEKEERLEELKKKLKELEKRLEELEERHelyEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEE 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1007 SHNQCQELK----------AGYEKATSE---------------TKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQEL 1061
Cdd:PRK03918 403 IEEEISKITarigelkkeiKELKKAIEElkkakgkcpvcgrelTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKEL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1062 EELRKQADKAKSLTYLLTSAkKEIELMSEELRGLKSEKqlLSQEGNDLKLengsLLSKLVELEAKIALLQGDQQKLwsvn 1141
Cdd:PRK03918 483 RELEKVLKKESELIKLKELA-EQLKELEEKLKKYNLEE--LEKKAEEYEK----LKEKLIKLKGEIKSLKKELEKL---- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1142 ETLNLEKEKFLEEKQDAEKhyEQEHLNKEvLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDAL 1221
Cdd:PRK03918 552 EELKKKLAELEKKLDELEE--ELAELLKE-LEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL 628
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 1222 IAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSN 1294
Cdd:PRK03918 629 DKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE 701
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
332-702 |
1.49e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.92 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 332 RTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKAtshvgeieqelalardghDQHVLELEAKMD 411
Cdd:TIGR02169 651 KSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI------------------ENRLDELSQELS 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 412 QLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTR 491
Cdd:TIGR02169 713 DASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR 792
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 492 VATVSEKSRimELEKDLALRVQEVAELRRRLESNKPagDVDMSLSLLQEISSLQEKLEVTRTDHQREITSL---KEHFGA 568
Cdd:TIGR02169 793 IPEIQAELS--KLEEEVSRIEARLREIEQKLNRLTL--EKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLngkKEELEE 868
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 569 REETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDV---IALWKSKLETAIASHQQAMEELK-VSFSKGLGTETAE 644
Cdd:TIGR02169 869 ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELeaqIEKKRKRLSELKAKLEALEEELSeIEDPKGEDEEIPE 948
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 645 FAELKTQIEKMRLDYQHEIE-----NLQNQQDSERSahAKEMEALRAKLMKVIKEKENSLEAI 702
Cdd:TIGR02169 949 EELSLEDVQAELQRVEEEIRalepvNMLAIQEYEEV--LKRLDELKEKRAKLEEERKAILERI 1009
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
624-1339 |
2.26e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.13 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 624 QQAMEELKVSFSKGLGTETAEFAELKTQIEKMrLDYQHEIENLQNQQDSERsahakemealraklmKVIKEKENSLEAIK 703
Cdd:TIGR00606 188 LETLRQVRQTQGQKVQEHQMELKYLKQYKEKA-CEIRDQITSKEAQLESSR---------------EIVKSYENELDPLK 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 704 SKLDKAEDQ--HLVEMEETLNKLQE---------AEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLdalqkas 772
Cdd:TIGR00606 252 NRLKEIEHNlsKIMKLDNEIKALKSrkkqmekdnSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDC------- 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 773 segKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLsEVSQVKDTLEKELQI---LKEKF 849
Cdd:TIGR00606 325 ---QRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRL-ELDGFERGPFSERQIknfHTLVI 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 850 AEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdLEKLREnlaEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGdN 929
Cdd:TIGR00606 401 ERQEDEAKTAAQLCADLQSKERLKQEQ-------ADEIRD---EKKGLGRTIELKKEILEKKQEELKFVIKELQQLEG-S 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 930 SSQLTKMNDELRLKERyveelqlKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKME---- 1005
Cdd:TIGR00606 470 SDRILELDQELRKAER-------ELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEmltk 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1006 ---TSHNQCQELKA-GYEKATSET-----KTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADK------ 1070
Cdd:TIGR00606 543 dkmDKDEQIRKIKSrHSDELTSLLgyfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESkeeqls 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1071 -----------AKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGS---LLSKLVELEAKIALLQGDQQK 1136
Cdd:TIGR00606 623 syedklfdvcgSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSccpVCQRVFQTEAELQEFISDLQS 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1137 LWSVNETLNLEKEKFLEEKqdaEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINME----NDSLQASKVSMQTLIE 1212
Cdd:TIGR00606 703 KLRLAPDKLKSTESELKKK---EKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDiqrlKNDIEEQETLLGTIMP 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1213 ELQLSKDAL-----------------------------------IAKTEKDQEERDHLADQIKKLITENFILAKDKDDII 1257
Cdd:TIGR00606 780 EEESAKVCLtdvtimerfqmelkdverkiaqqaaklqgsdldrtVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQI 859
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1258 QKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNAL---QNNRDLQLETDMLLHDQEKLNASL 1334
Cdd:TIGR00606 860 QHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSpleTFLEKDQQEKEELISSKETSNKKA 939
|
....*
gi 1622847176 1335 QAALQ 1339
Cdd:TIGR00606 940 QDKVN 944
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1000-1615 |
2.46e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1000 LEKKMETSHNqcqelkagyekatsETKTKhEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELR----KQADKAKSLT 1075
Cdd:TIGR04523 38 LEKKLKTIKN--------------ELKNK-EKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNdklkKNKDKINKLN 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1076 YLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEK 1155
Cdd:TIGR04523 103 SDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1156 QDAEKHYEQ---EHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQL----SKDALIAKTEKD 1228
Cdd:TIGR04523 183 LNIQKNIDKiknKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTeisnTQTQLNQLKDEQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1229 QEERDHLADQIKKLITENFILaKDKDDIIQKLQSSYEEL--------VKDQKALVQDIEDLTAEKKSAL----EKLSNLD 1296
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQNNKKI-KELEKQLNQLKSEISDLnnqkeqdwNKELKSELKNQEKKLEEIQNQIsqnnKIISQLN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1297 NTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATN 1376
Cdd:TIGR04523 342 EQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1377 TSLTKLLEEIKARRAVTDSECIQL---LHEKETLAASERRLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYL 1453
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLtnqDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1454 TSEKEMASQKMTKLKKHQDSLLKEKSALETQngvlLAERENSIKAIGDLKRQCDQEsanrriivQENMKLLGNIDALKKE 1533
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESE----KKEKESKISDLEDELNKDDFE--------LKKENLEKEIDEKNKE 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1534 LQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQE 1613
Cdd:TIGR04523 570 IEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
..
gi 1622847176 1614 MQ 1615
Cdd:TIGR04523 650 IK 651
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1215-1562 |
2.55e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 52.59 E-value: 2.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1215 QLSKDALIAKTEKDQEERDH--LADQIKKLITEnfilAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKL 1292
Cdd:pfam07888 56 QREKEKERYKRDREQWERQRreLESRVAELKEE----LRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARI 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1293 SNLDNTCIAL---KVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQllrSEASGLRAQLDDASKALRKAELET 1369
Cdd:pfam07888 132 RELEEDIKTLtqrVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTE---EELRSLSKEFQELRNSLAQRDTQV 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1370 MQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLS----ENRIITEkLHKCSEEAAHTEMS 1445
Cdd:pfam07888 209 LQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSmaaqRDRTQAE-LHQARLQAAQLTLQ 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1446 LNEKITYLTSEKEMASQKMTKL----KKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENM 1521
Cdd:pfam07888 288 LADASLALREGRARWAQERETLqqsaEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQ 367
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1622847176 1522 KLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAK 1562
Cdd:pfam07888 368 ELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLETVADAK 408
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1445-2050 |
3.72e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.33 E-value: 3.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1445 SLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLL 1524
Cdd:TIGR04523 72 NSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1525 GNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHT---HILQAKENLDAELNTCCSEKNILLRDSLNLQ 1601
Cdd:TIGR04523 152 KELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLkleLLLSNLKKKIQKNKSLESQISELKKQNNQLK 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1602 EECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQ----- 1676
Cdd:TIGR04523 232 DNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdwnke 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1677 ---EVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLA 1753
Cdd:TIGR04523 312 lksELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLES 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1754 EKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELEtlqsftaaQTA 1833
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLD--------NTR 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1834 EDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNlKNVEELNKskelltVENQKMEEFRKEIETLKQAAAQK 1913
Cdd:TIGR04523 464 ESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEK-KELEEKVK------DLTKKISSLKEKIEKLESEKKEK 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1914 SQQLSALQEENVKLAEELGRSrdevtshqKLEEERSVLNNQLLEMK---KSLPSNTLRESKFIKDADEEKASLQKSISIT 1990
Cdd:TIGR04523 537 ESKISDLEDELNKDDFELKKE--------NLEKEIDEKNKEIEELKqtqKSLKKKQEEKQELIDQKEKEKKDLIKEIEEK 608
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1991 SALLTEKDAELEKLRNEvtvlrgenasAKSLHSVVQTLESDKVKLELKVKNLELQLKENK 2050
Cdd:TIGR04523 609 EKKISSLEKELEKAKKE----------NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-599 |
3.75e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.37 E-value: 3.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAEVAkatshvgEIEQELALARDGHDQHVLELEAKMDQLRTMVEAA---- 420
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELE-------AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLkeel 798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 421 ---DREKVELLNQLEEEKR-------KVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDT 490
Cdd:TIGR02168 799 kalREALDELRAELTLLNEeaanlreRLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 491 RVATVSEKSRIMELEKDLALRVQEVAELRRRlesnkpAGDVDMSLSLLQE-ISSLQEKLEVTRTDHQREITSLKEHFGAR 569
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESK------RSELRRELEELREkLAQLELRLEGLEVRIDNLQERLSEEYSLT 952
|
250 260 270
....*....|....*....|....*....|
gi 1622847176 570 EETHQKEIKALYTATEKLSKENESLKSKLE 599
Cdd:TIGR02168 953 LEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
482-945 |
4.47e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 52.26 E-value: 4.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 482 KLQRELEDTRVATVSEKSRIMELEKDLAlrvqEVAELRRRLESnkpagDVDMS---LSLLQEISSLQEKLEVTRTDHQRE 558
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEMARELE----ELSARESDLEQ-----DYQAAsdhLNLVQTALRQQEKIERYQEDLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 559 ITSLKEHFGAREETH--QKEIKALYTATEKlskENESLKSKLehankensdviALWKSKLET----AIASHQ--QAMEEL 630
Cdd:COG3096 360 TERLEEQEEVVEEAAeqLAEAEARLEAAEE---EVDSLKSQL-----------ADYQQALDVqqtrAIQYQQavQALEKA 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 631 KVSFskGLGTETAEFAELKTQIEKMRLDYQHEiENLQNQQ-----DSERSAHAKEMEALRAKLMKVikEKENSLEAIKSK 705
Cdd:COG3096 426 RALC--GLPDLTPENAEDYLAAFRAKEQQATE-EVLELEQklsvaDAARRQFEKAYELVCKIAGEV--ERSQAWQTAREL 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 706 LDKAEDQ------------HLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLkatEEKLLDLDALQKASS 773
Cdd:COG3096 501 LRRYRSQqalaqrlqqlraQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAEL---EAQLEELEEQAAEAV 577
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 774 EGKSEMeklRQQLEAAEKQIKHLEieknaessKASSITRELQGRelkltnlqenlsevsqvkdtlekeLQILKEKFAEAS 853
Cdd:COG3096 578 EQRSEL---RQQLEQLRARIKELA--------ARAPAWLAAQDA------------------------LERLREQSGEAL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 854 EEAVSVQRSMQETvnklhqkeeqfnmlssdLEKLREnlAEMEakfrekderEEQLIKAKEKLENDIAEIMKMSGDNSSQL 933
Cdd:COG3096 623 ADSQEVTAAMQQL-----------------LERERE--ATVE---------RDELAARKQALESQIERLSQPGGAEDPRL 674
|
490
....*....|..
gi 1622847176 934 tkmndeLRLKER 945
Cdd:COG3096 675 ------LALAER 680
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1594-2048 |
5.79e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.58 E-value: 5.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1594 LRDSLN-LQEECQKLSEEIQEMQqslilEQEARAKEK----ESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLL 1668
Cdd:PRK02224 204 LHERLNgLESELAELDEEIERYE-----EQREQARETrdeaDEVLEEHEERREELETLEAEIEDLRETIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1669 QEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQElhSCLTKILDDLQLNHEV-TLAEKAQVMQD 1747
Cdd:PRK02224 279 EEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRD--RLEECRVAAQAHNEEAeSLREDADDLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1748 NQNLLAEK-----SEMMLEKDELLKEKEMLAEsyfiLQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELE 1822
Cdd:PRK02224 357 RAEELREEaaeleSELEEAREAVEDRREEIEE----LEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1823 -TLQsfTAAQTAEDAMQIMEQ-------MTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQ 1894
Cdd:PRK02224 433 aTLR--TARERVEEAEALLEAgkcpecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDR 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1895 --KMEEFRKEIETL----KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS-HQKLEEERSV---LNNQLLEMKKSLPS 1964
Cdd:PRK02224 511 ieRLEERREDLEELiaerRETIEEKRERAEELRERAAELEAEAEEKREAAAEaEEEAEEAREEvaeLNSKLAELKERIES 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1965 -NTLRES-KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKslhsvVQTLESDKVKLELKVKNL 2042
Cdd:PRK02224 591 lERIRTLlAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR-----IEEAREDKERAEEYLEQV 665
|
....*.
gi 1622847176 2043 ELQLKE 2048
Cdd:PRK02224 666 EEKLDE 671
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
650-1289 |
5.97e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 52.00 E-value: 5.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 650 TQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIK--SKLDKAE--DQHLVEMEETLNKLQ 725
Cdd:COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKrfSLLKKETiyLQSAQRVELAERQLQ 885
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 726 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDL-DALQKASSEGKSEME----KLRQQLEAAEKQ 792
Cdd:COG5022 886 ELKIDVKSISSLKLVNLELESEIIELKKSLSSDLienlefktELIARLkKLLNNIDLEEGPSIEyvklPELNKLHEVESK 965
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 793 IKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQ 872
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSIL 1045
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 873 KEEQfnmlssDLEKLrenlaeMEAKFREKDEREEQLIKAKEKLENDIAEIMKMsgdnssqltkmndelrlkeRYVEELQL 952
Cdd:COG5022 1046 KPLQ------KLKGL------LLLENNQLQARYKALKLRRENSLLDDKQLYQL-------------------ESTENLLK 1094
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 953 KLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEI 1032
Cdd:COG5022 1095 TINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF 1174
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1033 LQNLRKTLLD---TEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDL 1109
Cdd:COG5022 1175 AALSEKRLYQsalYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNNLNKKFDTPA 1254
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1110 KLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLE-----------KEKFLEEKQDAEKHYEQEHLnkevlavEREK 1178
Cdd:COG5022 1255 SMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYinvglfnalrtKASSLRWKSATEVNYNSEEL-------DDWC 1327
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1179 LLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLAdqiKKLITENFILAKDKDD-II 1257
Cdd:COG5022 1328 REFEISDVDEELEELIQAVKVLQLLKDDLNKLDELLDACYSLNPAEIQNLKSRYDPAD---KENNLPKEILKKIEALlIK 1404
|
650 660 670
....*....|....*....|....*....|..
gi 1622847176 1258 QKLQSSYEELVKDQKALvqdiEDLTAEKKSAL 1289
Cdd:COG5022 1405 QELQLSLEGKDETEVHL----SEIFSEEKSLI 1432
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
820-1049 |
6.30e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 6.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 820 KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR 899
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 900 EKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERY----VEELQLKLTKANENASFLQKSIEDMTlKA 975
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPArreqAEELRADLAELAALRAELEAERAELE-AL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 976 EQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKG 1049
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
826-1939 |
7.25e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 51.33 E-value: 7.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 826 ENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDERE 905
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 906 EQLIKAKEKLENDIAEImkmsgdnssqltkmndELRLKERYVEELQLKLTKANENASFlqKSIEDMTLKAEQSQQEAAEK 985
Cdd:pfam01576 92 QQLQNEKKKMQQHIQDL----------------EEQLDEEEAARQKLQLEKVTTEAKI--KKLEEDILLLEDQNSKLSKE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 986 HEEEKKELERKLSDLEKKMETSHNqCQELKAGYEKATSETK---TKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELE 1062
Cdd:pfam01576 154 RKLLEERISEFTSNLAEEEEKAKS-LSKLKNKHEAMISDLEerlKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1063 ELRKQAdkaksltylltsAKKEIELMSEELRglksekqlLSQEGNDlkleNGSLLSKLVELEAKIALLQGDqqklwsvne 1142
Cdd:pfam01576 233 ELRAQL------------AKKEEELQAALAR--------LEEETAQ----KNNALKKIRELEAQISELQED--------- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1143 tlnLEKEKFLEEKQDAEKHYEQEHLnkEVLAVEREKLLKEINVAQEELLKINMENDSLQaskvsmQTLIEELQLSKDALI 1222
Cdd:pfam01576 280 ---LESERAARNKAEKQRRDLGEEL--EALKTELEDTLDTTAAQQELRSKREQEVTELK------KALEEETRSHEAQLQ 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1223 AKTEKDQEERDHLADQIKKLITENFILAKDKddiiQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIAL 1302
Cdd:pfam01576 349 EMRQKHTQALEELTEQLEQAKRNKANLEKAK----QALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSES 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1303 KVERDNALQNNRDLQLETdmllhdqEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKaelETMQLQATNTSLTKL 1382
Cdd:pfam01576 425 ERQRAELAEKLSKLQSEL-------ESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQE---ETRQKLNLSTRLRQL 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1383 LEEIKARRAvtdseciQLLHEKETLAASERRLLAEKEELLsenriiteKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQ 1462
Cdd:pfam01576 495 EDERNSLQE-------QLEEEEEAKRNVERQLSTLQAQLS--------DMKKKLEEDAGTLEALEEGKKRLQRELEALTQ 559
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1463 KMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDL---KRQCDQESANRRIIVQENMKllgniDALKKELQERKN 1539
Cdd:pfam01576 560 QLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLekkQKKFDQMLAEEKAISARYAE-----ERDRAEAEAREK 634
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1540 ENQELvaskcDLSLMLKEAQNAKKNLEKehthilqAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLI 1619
Cdd:pfam01576 635 ETRAL-----SLARALEEALEAKEELER-------TNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLE 702
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1620 -LEQEARAKEKESSLYENN----------QLHGR-------MVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEI 1681
Cdd:pfam01576 703 eLEDELQATEDAKLRLEVNmqalkaqferDLQARdeqgeekRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKEL 782
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1682 ieEKELLTAEAAQLAAhIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAE---KSEM 1758
Cdd:pfam01576 783 --EAQIDAANKGREEA-VKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASeraRRQA 859
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1759 MLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSF--TAAQTAEDA 1836
Cdd:pfam01576 860 QQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAerSTSQKSESA 939
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1837 MQIMEQMTKEKTETLASLEDT-----KQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAA 1911
Cdd:pfam01576 940 RQQLERQNKELKAKLQEMEGTvkskfKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHAD 1019
|
1130 1140
....*....|....*....|....*...
gi 1622847176 1912 QKSQQLSALQEENVKLAEELGRSRDEVT 1939
Cdd:pfam01576 1020 QYKDQAEKGNSRMKQLKRQLEEAEEEAS 1047
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
410-971 |
7.30e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 51.44 E-value: 7.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 410 MDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELeQSLLFEKTKADKLQRELED 489
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNEL-SSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 490 TRVATVSEKSRIMELEKDLalrvqevaelrRRLESNKPAGDVDMSLSLLQEISSLQEKLEVtrtdhqreITSLKEHFGAR 569
Cdd:PRK01156 264 DLSMELEKNNYYKELEERH-----------MKIINDPVYKNRNYINDYFKYKNDIENKKQI--------LSNIDAEINKY 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 570 EETHQK--EIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEELKVSFSKGLGTETAEF 645
Cdd:PRK01156 325 HAIIKKlsVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDP 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 646 AELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALRAKLMKvikEKENSLEAIKSKLDKAEDQHLVE-MEETLNKL 724
Cdd:PRK01156 405 DAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEML---NGQSVCPVCGTTLGEEKSNHIINhYNEKKSRL 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 725 QEaeiKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHL 796
Cdd:PRK01156 482 EE---KIREIEIEVKDIDEKIVDLKKRKEYLESEEinksineyNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSL 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 797 EIEkNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQ 876
Cdd:PRK01156 559 KLE-DLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 877 FNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLeNDIAEIMKMSgdnSSQLTKMNDELRLKERYVEELQLKLTK 956
Cdd:PRK01156 638 IQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRI-NDIEDNLKKS---RKALDDAKANRARLESTIEILRTRINE 713
|
570
....*....|....*
gi 1622847176 957 ANENASFLQKSIEDM 971
Cdd:PRK01156 714 LSDRINDINETLESM 728
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
405-1286 |
8.13e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.20 E-value: 8.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 405 ELEAKMDQLRTMVEAADREKVELlNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ 484
Cdd:TIGR00606 225 QITSKEAQLESSREIVKSYENEL-DPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 485 RELEDTRVATVSEKSR-IMELEKDLALRVQEVAELRRRlesnkpagdvdmSLSLLQEISSLQEKLEVTRtDHQREITSLK 563
Cdd:TIGR00606 304 NDLYHNHQRTVREKEReLVDCQRELEKLNKERRLLNQE------------KTELLVEQGRLQLQADRHQ-EHIRARDSLI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 564 EHFGAREETHQKEIKALytATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAiashQQAMEELKVSFSKGLGTETA 643
Cdd:TIGR00606 371 QSLATRLELDGFERGPF--SERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLK----QEQADEIRDEKKGLGRTIEL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 644 EFAELKTQIEKMRldyqHEIENLQNQQDSERSAHAKEMEALRAK----------LMKVIKEKENSLEAIKSKLDK---AE 710
Cdd:TIGR00606 445 KKEILEKKQEELK----FVIKELQQLEGSSDRILELDQELRKAErelskaeknsLTETLKKEVKSLQNEKADLDRklrKL 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 711 DQHLVEME-ETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLR------ 783
Cdd:TIGR00606 521 DQEMEQLNhHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAklnkel 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 784 QQLEAAEKQIKHLEIEKNAESSKASSITREL---QGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQ 860
Cdd:TIGR00606 601 ASLEQNKNHINNELESKEEQLSSYEDKLFDVcgsQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCC 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 861 RSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDEL 940
Cdd:TIGR00606 681 PVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDI 760
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 941 RLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEK 1020
Cdd:TIGR00606 761 QRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDT 840
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1021 ATSEtktkheeiLQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQ 1100
Cdd:TIGR00606 841 VVSK--------IELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDS 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1101 LLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVE----- 1175
Cdd:TIGR00606 913 PLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEecekh 992
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1176 REKLLKEINVAQEELLKINMENDSLQaSKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDD 1255
Cdd:TIGR00606 993 QEKINEDMRLMRQDIDTQKIQERWLQ-DNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHV 1071
|
890 900 910
....*....|....*....|....*....|.
gi 1622847176 1256 IIQKLQSSYEELVKDQKALVQDIEDLTAEKK 1286
Cdd:TIGR00606 1072 LALGRQKGYEKEIKHFKKELREPQFRDAEEK 1102
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
496-1140 |
9.16e-06 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 50.91 E-value: 9.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 496 SEKSRIMELEKDLALRVQEVAELRRRLE---SNKPAGDVDMSLSLLQEISSLQEKLEVTRTdhqreiTSLKEHFgaREET 572
Cdd:pfam07111 27 TQRPTVTMWEQDVSGDGQGPGRRGRSLElegSQALSQQAELISRQLQELRRLEEEVRLLRE------TSLQQKM--RLEA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 573 HQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQI 652
Cdd:pfam07111 99 QAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 653 EKMRLDYQHEIENL---QNQQDSERSAHAKEMEALRAKLMKVIK--------------------EKENSLEAIKS-KLDK 708
Cdd:pfam07111 179 NSLETKRAGEAKQLaeaQKEAELLRKQLSKTQEELEAQVTLVESlrkyvgeqvppevhsqtwelERQELLDTMQHlQEDR 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 709 AEDQHLVEMEET-------LNKLQEAEI--KVKELEVLQAKCNEQTKvidnftSQLKATEEKLLDLDALQKASS-EGKSE 778
Cdd:pfam07111 259 ADLQATVELLQVrvqslthMLALQEEELtrKIQPSDSLEPEFPKKCR------SLLNRWREKVFALMVQLKAQDlEHRDS 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 779 MEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVS 858
Cdd:pfam07111 333 VKQLRGQVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARRRQQQQTASAEEQLKFVVNAMSS 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 859 VQRSMQETVNKLHQKEEQF----NMLSSDLEKLRENLAEMEAKFREKDEREEQ--LIKAKEKLENDIAEIMKMSGDNSSQ 932
Cdd:pfam07111 413 TQIWLETTMTRVEQAVARIpslsNRLSYAVRKVHTIKGLMARKVALAQLRQEScpPPPPAPPVDADLSLELEQLREERNR 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 933 LtkmNDELRLKERYVeelQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQ 1012
Cdd:pfam07111 493 L---DAELQLSAHLI---QQEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQ 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1013 ELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKsltylltSAKKEIELMSEEL 1092
Cdd:pfam07111 567 ELTQQQEIYGQALQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEK-------ERNQELRRLQDEA 639
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 1622847176 1093 RglKSEKQLLSQEGNDLKLENGSLLSKlveLEAKIALLQGDQQKLWSV 1140
Cdd:pfam07111 640 R--KEEGQRLARRVQELERDKNLMLAT---LQQEGLLSRYKQQRLLAV 682
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1067-1293 |
1.01e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1067 QADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLwsvnetlnL 1146
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL--------E 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1147 EKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLlkEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTE 1226
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLGRQPPL--ALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1227 KDQEERDHLADQIKKLITENFILA---KDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLS 1293
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEalkAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1773-2071 |
1.37e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.71 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1773 AESYFILQKEISQLAKTnsHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQImEQMTKEKTETLA 1852
Cdd:COG1196 212 AERYRELKEELKELEAE--LLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLEL-EELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1853 SLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIEtlkQAAAQKSQQLSALQEENVKLAEELG 1932
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE---ELEEELEEAEEELEEAEAELAEAEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1933 RSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLR 2012
Cdd:COG1196 366 ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE 445
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 2013 GENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQ 2071
Cdd:COG1196 446 EAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
712-922 |
1.38e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 712 QHLVEMEETLNKLQEaeiKVKELEVLQAKCNEQTKVIDNFtSQLKATEEKLlDLDALQKASSEGKSEMEKLRQQLEAAEK 791
Cdd:COG4913 235 DDLERAHEALEDARE---QIELLEPIRELAERYAAARERL-AELEYLRAAL-RLWFAQRRLELLEAELEELRAELARLEA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 792 QIKHLEIEKNAESSKASSITRELQGREL-KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKL 870
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNGGdRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA 389
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1622847176 871 HQKEEQfnmLSSDLEKLRENLAEMEAKFREKDEREEQLikakeklENDIAEI 922
Cdd:COG4913 390 AALLEA---LEEELEALEEALAEAEAALRDLRRELREL-------EAEIASL 431
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
999-1695 |
1.51e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.35 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 999 DLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAR-------------EENSGLLQELEELR 1065
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQqshayltqkreaqEEQLKKQQLLKQLR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1066 KQADKAKSLTYLLTSAKKEIELMSEELRgLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLN 1145
Cdd:TIGR00618 267 ARIEELRAQEAVLEETQERINRARKAAP-LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRR 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1146 LEKEKFLEEKQDAEKHYEQ----EHLNKEVLAVEREKLLKEINVAQEELLKI-NMENDSLQASKVSMQTLIEELQLSKDA 1220
Cdd:TIGR00618 346 LLQTLHSQEIHIRDAHEVAtsirEISCQQHTLTQHIHTLQQQKTTLTQKLQSlCKELDILQREQATIDTRTSAFRDLQGQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1221 LiAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELvKDQKALVQDIEDLTAEKKSALEKlsnldntcI 1300
Cdd:TIGR00618 426 L-AHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKER-EQQLQTKEQIHLQETRKKAVVLA--------R 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1301 ALKVERDNALQNNRDLQLETDMLLHDQEKLNAS-LQAALQVKQLLRSEASGLRAQLDDASKALRKAELETMQLQATNTSL 1379
Cdd:TIGR00618 496 LLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRrMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSIL 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1380 TKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIiteklhkcseeaahtEMSLNEKITYLTSEKEM 1459
Cdd:TIGR00618 576 TQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQP---------------EQDLQDVRLHLQQCSQE 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1460 ASQKMTKLKKHQDSLLKEK-----SALETQNGVLLAERENSIKAIGDLKRQCdqeSANRRIIVQENMKLLGNIDALKKEL 1534
Cdd:TIGR00618 641 LALKLTALHALQLTLTQERvrehaLSIRVLPKELLASRQLALQKMQSEKEQL---TYWKEMLAQCQTLLRELETHIEEYD 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1535 QERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEM 1614
Cdd:TIGR00618 718 REFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREED 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1615 QQSL-ILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRvcteelqsEKFVLLQEKTKSEQEVAEIIEEKELLTAEAA 1693
Cdd:TIGR00618 798 THLLkTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLE--------EKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
..
gi 1622847176 1694 QL 1695
Cdd:TIGR00618 870 KI 871
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
680-965 |
1.56e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.12 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 680 EMEALRAKLMKVIKEKENSLEAIKSKLDKAEDQHLVEMEEtlNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 759
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKE--EKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 760 EKLLDLDALQKasSEGKSEMEKLRQQLEAAE-KQIKHLEIEKNAESSKASSITRELQG-RELKLT------NLQENLSEV 831
Cdd:pfam17380 345 ERERELERIRQ--EERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAaRKVKILeeerqrKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 832 SQVK----DTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR-----EKD 902
Cdd:pfam17380 423 EQIRaeqeEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkilekELE 502
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 903 EREEQLIKAKEK---LENDIAEimKMSGDNSSQLTKMNDELRLKERYVEE---LQLKLTKANENASFLQ 965
Cdd:pfam17380 503 ERKQAMIEEERKrklLEKEMEE--RQKAIYEEERRREAEEERRKQQEMEErrrIQEQMRKATEERSRLE 569
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
662-1086 |
1.59e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 662 EIENLQNQQDSERSAHAKEMEALRAKL------MKVIKEKENSLEAIKSKLDKAEDQ--HLVEMEETLNKLQEAEIKVKE 733
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELkeaeekEEEYAELQEELEELEEELEELEAEleELREELEKLEKLLQLLPLYQE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 734 LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQL-EAAEKQIKHLEIEKNAESSKASSITR 812
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 813 ELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE------------QFNML 880
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlgllalLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 881 SSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANEN 960
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 961 ASFLQ---KSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLR 1037
Cdd:COG4717 374 ALLAEagvEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELRE 453
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 1038 K--------TLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIE 1086
Cdd:COG4717 454 ElaeleaelEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
691-1242 |
1.70e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.04 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 691 VIKEKENSLEAIKSKLDKAEDQHLVEmeetlnKLQEAEIKVKELEVLQAKCNEQ----TKVIDNFTSQLKATEEKLLDLD 766
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQreqaRETRDEADEVLEEHEERREELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 767 ALQKA---SSEGKSEMEK-----------LRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVS 832
Cdd:PRK02224 255 TLEAEiedLRETIAETERereelaeevrdLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 833 QVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAK 912
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 913 EKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQsqqeaaekHEEEKKE 992
Cdd:PRK02224 415 EELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEE--------LEAELED 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 993 LERKLSDLEKKMETShNQCQELKAGYEKaTSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAK 1072
Cdd:PRK02224 487 LEEEVEEVEERLERA-EDLVEAEDRIER-LEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1073 SltylltsakkEIELMSEELRGLKSEKQLLSQEGNDLklenGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKfL 1152
Cdd:PRK02224 565 E----------EAEEAREEVAELNSKLAELKERIESL----ERIRTLLAAIADAEDEIERLREKREALAELNDERRER-L 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1153 EEKQDAEKHYEQEH--LNKEVLAVEREKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELqlskdaliaktEKDQE 1230
Cdd:PRK02224 630 AEKRERKRELEAEFdeARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL-----------EELRE 698
|
570
....*....|..
gi 1622847176 1231 ERDHLADQIKKL 1242
Cdd:PRK02224 699 RREALENRVEAL 710
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
820-1391 |
1.74e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.06 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 820 KLTNLQENLSEVSQVKDTLEKELqilkEKFAEASEEavsVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFR 899
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERL----EKFIKRTEN---IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVK 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 900 EKDEREEQLIKAKEKLENDIAEIMKMSGDnSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIE--DMTLKAEQ 977
Cdd:PRK03918 232 ELEELKEEIEELEKELESLEGSKRKLEEK-IRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEfyEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 978 SQQEAAEKHEEEKKELERKLSDLEKKmETSHNQCQELKAGYEKATSETKTKHEEIlqNLRKTLLDTEDKLKGAREENSgl 1057
Cdd:PRK03918 311 EIEKRLSRLEEEINGIEERIKELEEK-EERLEELKKKLKELEKRLEELEERHELY--EEAKAKKEELERLKKRLTGLT-- 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1058 LQELEELRKQADKAKsltyllTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGS--LLSKLVELEAKIALLQGDQQ 1135
Cdd:PRK03918 386 PEKLEKELEELEKAK------EEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpVCGRELTEEHRKELLEEYTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1136 KLWSVNETLNLEKEKflEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMEN---------------DSL 1200
Cdd:PRK03918 460 ELKRIEKELKEIEEK--ERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEElekkaeeyeklkeklIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1201 QASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELV------KDQKAL 1274
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLelkdaeKELERE 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1275 VQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQN-NRDLQLETDMLLHDQEKLNASLQAALQVKQLLRSEASGLRA 1353
Cdd:PRK03918 618 EKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKySEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLE 697
|
570 580 590
....*....|....*....|....*....|....*...
gi 1622847176 1354 QLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRA 1391
Cdd:PRK03918 698 KLKEELEEREKAKKELEKLEKALERVEELREKVKKYKA 735
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
405-923 |
1.82e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.17 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ 484
Cdd:pfam01576 72 ELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 485 RE--LEDTRVATVS-------EKSRIMELEK--------DLALRVQEVAELRRRLESNKPAGDvdmslsllQEISSLQEK 547
Cdd:pfam01576 152 KErkLLEERISEFTsnlaeeeEKAKSLSKLKnkheamisDLEERLKKEEKGRQELEKAKRKLE--------GESTDLQEQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 548 LevtrTDHQREITSLKEHFGAREETHQkeiKALYTATEKLSKENESLKSKLEHAN-----KENSDVIALWKSKLETAIAS 622
Cdd:pfam01576 224 I----AELQAQIAELRAQLAKKEEELQ---AALARLEEETAQKNNALKKIRELEAqiselQEDLESERAARNKAEKQRRD 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 623 HQQAMEELKVSFSKGLGTeTAEFAELKTQIEKmrldyqhEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAI 702
Cdd:pfam01576 297 LGEELEALKTELEDTLDT-TAAQQELRSKREQ-------EVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQA 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 703 K---SKLDKA------EDQHLVEMEETLNKL-QEAEIKVKELEV----LQAKCNEQTKVIDNFTSQLKATEeklLDLDAL 768
Cdd:pfam01576 369 KrnkANLEKAkqalesENAELQAELRTLQQAkQDSEHKRKKLEGqlqeLQARLSESERQRAELAEKLSKLQ---SELESV 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 769 QKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEK 848
Cdd:pfam01576 446 SSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQ 525
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 849 FAEaseeavsVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFrekdereEQLIKAKEKLENDIAEIM 923
Cdd:pfam01576 526 LSD-------MKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAY-------DKLEKTKNRLQQELDDLL 586
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1527-1731 |
1.97e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1527 IDALKKELQERKNEnqelvaskcdlslmLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQK 1606
Cdd:COG4942 22 AAEAEAELEQLQQE--------------IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1607 LSEEIQEMQQSLIlEQEARAKEKESSLYENNQLHGRMVLLEQE----------------------VEELRVCTEELQSEK 1664
Cdd:COG4942 88 LEKEIAELRAELE-AQKEELAELLRALYRLGRQPPLALLLSPEdfldavrrlqylkylaparreqAEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 1665 FVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQ 1731
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1021-1291 |
2.36e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 2.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1021 ATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQadkaksltylltsakkeIELMSEELRGLKSEKQ 1100
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERR-----------------IAALARRIRALEQELA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1101 LLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNetlnleKEKFLEEKQDAEKHYEQEHLNKEVLAvEREKLL 1180
Cdd:COG4942 80 ALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQP------PLALLLSPEDFLDAVRRLQYLKYLAP-ARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1181 KEINVAQEELLKINMEndsLQASKVSMQTLIEELQLSKDALiaktEKDQEERDHLADQIKKlitenfilakdkddIIQKL 1260
Cdd:COG4942 153 EELRADLAELAALRAE---LEAERAELEALLAELEEERAAL----EALKAERQKLLARLEK--------------ELAEL 211
|
250 260 270
....*....|....*....|....*....|.
gi 1622847176 1261 QSSYEELVKDQKALVQDIEDLTAEKKSALEK 1291
Cdd:COG4942 212 AAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1200-1962 |
2.77e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.73 E-value: 2.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1200 LQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDI----------IQKLQSSYEELVK 1269
Cdd:pfam15921 108 LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMledsntqieqLRKMMLSHEGVLQ 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1270 DQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERdnalqNNRDLQLETDMLLHDQEKLNASLQAalqvkqlLRSEAS 1349
Cdd:pfam15921 188 EIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAISK-----ILRELDTEISYLKGRIFPVEDQLEA-------LKSESQ 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1350 G-----LRAQLDDASKALRKAELEtmqlqatntsLTKLLEEIKARRAVTDSECIQLlhekETLAASERRLLAEKEELLSE 1424
Cdd:pfam15921 256 NkiellLQQHQDRIEQLISEHEVE----------ITGLTEKASSARSQANSIQSQL----EIIQEQARNQNSMYMRQLSD 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1425 NRIITEKLHKCSEEAAHTemsLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKR 1504
Cdd:pfam15921 322 LESTVSQLRSELREAKRM---YEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKE 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1505 QcdqesaNRRIIVQENMKLLgNIDALKKELQERKNENQELVASkcdLSLMLKEAQNakkNLEKEHTHILQAKENLD--AE 1582
Cdd:pfam15921 399 Q------NKRLWDRDTGNSI-TIDHLRRELDDRNMEVQRLEAL---LKAMKSECQG---QMERQMAAIQGKNESLEkvSS 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1583 LNTCCSEKNILLRDSLNlQEECQKLSEEIQEMQQSLI---LEQEARAKEKESSlyENNQLHGRMVLLEQEVEELRVCTEE 1659
Cdd:pfam15921 466 LTAQLESTKEMLRKVVE-ELTAKKMTLESSERTVSDLtasLQEKERAIEATNA--EITKLRSRVDLKLQELQHLKNEGDH 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1660 LQSEKF------VLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDF-AALSKSKAELQELhscltKILDDlql 1732
Cdd:pfam15921 543 LRNVQTecealkLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLeKEINDRRLELQEF-----KILKD--- 614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1733 nhevtlAEKAQVmqdnQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAktnshisanllesqNENRTLRKDKN 1812
Cdd:pfam15921 615 ------KKDAKI----RELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLL--------------NEVKTSRNELN 670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1813 KLTlkiRELETLQSFTAAQTAEdamqiMEQMT-KEKTETLASLEDTKQTnaklQNELDTLKENNLKNVEELNKSKELLTV 1891
Cdd:pfam15921 671 SLS---EDYEVLKRNFRNKSEE-----METTTnKLKMQLKSAQSELEQT----RNTLKSMEGSDGHAMKVAMGMQKQITA 738
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622847176 1892 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSrdeVTSHQKLEEERSVLNNQLLEMKKSL 1962
Cdd:pfam15921 739 KRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTV---ATEKNKMAGELEVLRSQERRLKEKV 806
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
660-1343 |
2.95e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 660 QHEIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAiKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQA 739
Cdd:TIGR00618 151 QGEFAQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSL-HGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELK 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 740 KCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAE------------SSKA 807
Cdd:TIGR00618 230 HLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAplaahikavtqiEQQA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 808 SSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASE------------EAVSVQRSMQETVNKLHQK-- 873
Cdd:TIGR00618 310 QRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHirdahevatsirEISCQQHTLTQHIHTLQQQkt 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 874 --EEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAK--EKLENDIAEIMKMSGDNSSQLTKMNDEL--RLKERYV 947
Cdd:TIGR00618 390 tlTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKkqQELQQRYAELCAAAITCTAQCEKLEKIHlqESAQSLK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 948 EELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKLSDLekkMETSHNQCQELKAGYEKATSETKT 1027
Cdd:TIGR00618 470 EREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDN---PGPLTRRMQRGEQTYAQLETSEED 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1028 KhEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLtsaKKEIELMSEELRGLKSEKQLLSQEGN 1107
Cdd:TIGR00618 547 V-YHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRL---QDLTEKLSEAEDMLACEQHALLRKLQ 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1108 ------DLKLENGSLLSKLVELEAKIA-----LLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKH-YEQEHLNKEVLAVE 1175
Cdd:TIGR00618 623 peqdlqDVRLHLQQCSQELALKLTALHalqltLTQERVREHALSIRVLPKELLASRQLALQKMQSeKEQLTYWKEMLAQC 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1176 REKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDD 1255
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSH 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1256 IIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETD-MLLHDQEKLNASL 1334
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEIThQLLKYEECSKQLA 862
|
....*....
gi 1622847176 1335 QAALQVKQL 1343
Cdd:TIGR00618 863 QLTQEQAKI 871
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
428-959 |
3.93e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 3.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 428 LNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTK----ADKLQRELEDTRVATVSEKSRIME 503
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLlekeKLNIQKNIDKIKNKLLKLELLLSN 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 504 LE------KDLALRVQEVAELRRRLESNKPAGDVDMSlSLLQEISSLQEKLEVTRTDHQREITSLKEhfgareetHQKEI 577
Cdd:TIGR04523 206 LKkkiqknKSLESQISELKKQNNQLKDNIEKKQQEIN-EKTTEISNTQTQLNQLKDEQNKIKKQLSE--------KQKEL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 578 KALYTATEKLSKENESLKSKLEHANKENSDVialWKSKLETAIASHQQAMEELKVSFSKglgtETAEFAELKTQIEKmrl 657
Cdd:TIGR04523 277 EQNNKKIKELEKQLNQLKSEISDLNNQKEQD---WNKELKSELKNQEKKLEEIQNQISQ----NNKIISQLNEQISQ--- 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 658 dyqheIENLQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKS-KLDKAEDQHLVEMEETLNKLQEAEIKVKELEv 736
Cdd:TIGR04523 347 -----LKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNlESQINDLESKIQNQEKLNQQKDEQIKKLQQE- 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 737 lqakcneqtkvidnftsqlkaTEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQG 816
Cdd:TIGR04523 421 ---------------------KELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINK 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 817 RELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL--AEM 894
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELkkENL 559
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 895 EAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANE 959
Cdd:TIGR04523 560 EKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKK 624
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
699-897 |
3.94e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 3.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 699 LEAIKSKLDKAEDQ--HLVEMEETLNKLQEAEIKVKELEVL---------QAKCNEQTKVIDNFTSQLKATEEKLLDLDA 767
Cdd:COG4913 237 LERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLraalrlwfaQRRLELLEAELEELRAELARLEAELERLEA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 768 LQKASSEGKSEMEKLR-----QQLEAAEKQIKHLEieknaesskassitRELQGRELKLTNLQENLSEVSQVKDTLEKEL 842
Cdd:COG4913 317 RLDALREELDELEAQIrgnggDRLEQLEREIERLE--------------RELEERERRRARLEALLAALGLPLPASAEEF 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 843 QILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLAEMEAK 897
Cdd:COG4913 383 AALRAEAAALLEALEEELEALEEALAEAEAALRD---LRRELRELEAEIASLERR 434
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
336-523 |
5.76e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 5.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRT 415
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 416 MVEAADREKVELLNQLEEEKRKVEDLQFRVEeesitkgdlETQTKLEHA-RIKELEQSLLFEKtkadKLQRELEDTRVAT 494
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELD---------ELQDRLEAAeDLARLELRALLEE----RFAAALGDAVERE 766
|
170 180
....*....|....*....|....*....
gi 1622847176 495 VSEksrimELEKDLALRVQEVAELRRRLE 523
Cdd:COG4913 767 LRE-----NLEERIDALRARLNRAEEELE 790
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1342-1898 |
6.33e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.20 E-value: 6.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1342 QLLRSEASGLRAQLDDASKA---LRKAELETMQLQATNTSLtKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEK 1418
Cdd:pfam05557 17 EKKQMELEHKRARIELEKKAsalKRQLDRESDRNQELQKRI-RLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1419 EELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGvLLAERENSIKa 1498
Cdd:pfam05557 96 ESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQS-SLAEAEQRIK- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1499 igDLKRQCdQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQA--- 1575
Cdd:pfam05557 174 --ELEFEI-QSQEQDSEIVKNSKSELARIPELEKELERLREHNKHLNENIENKLLLKEEVEDLKRKLEREEKYREEAatl 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1576 ---KENLDAELNtccSEKNILLRDSLNLQEEcQKLSEEIQEMQQslilEQEARAKEKESSLYENNQLHGRMVLLEQEVEE 1652
Cdd:pfam05557 251 eleKEKLEQELQ---SWVKLAQDTGLNLRSP-EDLSRRIEQLQQ----REIVLKEENSSLTSSARQLEKARRELEQELAQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1653 LRVCTEELQSekfvllqeKTKSEQEVAEIIEEKE-LLTAEAAQLAAHIKTLKSDFaALSKSKAELQELHSCLTKILDDLQ 1731
Cdd:pfam05557 323 YLKKIEDLNK--------KLKRHKALVRRLQRRVlLLTKERDGYRAILESYDKEL-TMSNYSPQLLERIEEAEDMTQKMQ 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1732 LNHEVTLA--EKAQVMQDNQNLLAEKSEM---MLEKDELLKEKEMLAESYFILQKEISQLAKTNSHI--SANLLESQNEN 1804
Cdd:pfam05557 394 AHNEEMEAqlSVAEEELGGYKQQAQTLERelqALRQQESLADPSYSKEEVDSLRRKLETLELERQRLreQKNELEMELER 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1805 RTLRKDKNKLTLKIREletLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNK 1884
Cdd:pfam05557 474 RCLQGDYDPKKTKVLH---LSMNPAAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDLRK 550
|
570
....*....|....
gi 1622847176 1885 SKELLTVENQKMEE 1898
Cdd:pfam05557 551 ELESAELKNQRLKE 564
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1739-1933 |
6.82e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 6.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1739 AEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKI 1818
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1819 RE-------------LETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1885
Cdd:COG4942 107 AEllralyrlgrqppLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622847176 1886 KELLtveNQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGR 1933
Cdd:COG4942 187 RAAL---EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1860-2084 |
7.34e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.37 E-value: 7.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1860 TNAKLQNELDTLKENNLKNVEE------LNKSKELLtvenQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELG- 1932
Cdd:PRK11281 37 TEADVQAQLDALNKQKLLEAEDklvqqdLEQTLALL----DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDe 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1933 --RSRDEVTSHQKLEEERSVLNNQLLEMKKSLpsntlreskfiKDADEEKASLQKSISITSALLTEKDAELEKLRNEvtv 2010
Cdd:PRK11281 113 etRETLSTLSLRQLESRLAQTLDQLQNAQNDL-----------AEYNSQLVSLQTQPERAQAALYANSQRLQQIRNL--- 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 2011 LRGENASAKSLHSvvqtleSDKVKLELKVKNLELQLKENKRQLSSSSGNTDT---QADE-DERAQESQQMIDFLNSVI 2084
Cdd:PRK11281 179 LKGGKVGGKALRP------SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLlqkQRDYlTARIQRLEHQLQLLQEAI 250
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
765-921 |
7.90e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.46 E-value: 7.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 765 LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKD--TLEKEL 842
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyeALQKEI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 843 QILKEKFAEASEEavsvqrsMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREK----DEREEQLIKAKEKLEND 918
Cdd:COG1579 99 ESLKRRISDLEDE-------ILELMERIEELEEELAELEAELAELEAELEEKKAELDEElaelEAELEELEAEREELAAK 171
|
...
gi 1622847176 919 IAE 921
Cdd:COG1579 172 IPP 174
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
353-1314 |
8.43e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 48.12 E-value: 8.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 353 LQEALKEKQQHIEQLLAERDLERAEVAKATSHV-GEIEQELALARDGhdqhvlELEAKMDQLRTMVEAADREKVEllnql 431
Cdd:TIGR01612 625 LKKIIENNNAYIDELAKISPYQVPEHLKNKDKIySTIKSELSKIYED------DIDALYNELSSIVKENAIDNTE----- 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 432 eeEKRKVEDLQFRVEEESITKGDLETQTKLEHArikeleqsllfekTKADKLQRELEDTRVATvsEKSRIMELEKDLALR 511
Cdd:TIGR01612 694 --DKAKLDDLKSKIDKEYDKIQNMETATVELHL-------------SNIENKKNELLDIIVEI--KKHIHGEINKDLNKI 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 512 VQEVAELRRRLESN-----KPAGDVDMSLSLLQEISSlqeklevtRTDHQREITSLKEHFGAREETHQKE-IKALYTATE 585
Cdd:TIGR01612 757 LEDFKNKEKELSNKindyaKEKDELNKYKSKISEIKN--------HYNDQINIDNIKDEDAKQNYDKSKEyIKTISIKED 828
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 586 KLSKENESLKS-------------KLEHANKENSDV----IALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAEL 648
Cdd:TIGR01612 829 EIFKIINEMKFmkddflnkvdkfiNFENNCKEKIDSeheqFAELTNKIKAEISDDKLNDYEKKFNDSKSLINEINKSIEE 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 649 KTQIEKMRLDYQHEIENLQNQQDSERSAHAKEmEALRAKLMKVIKEKENSLEAIKSKLDKAEDQhlvemeeTLNKLQEAE 728
Cdd:TIGR01612 909 EYQNINTLKKVDEYIKICENTKESIEKFHNKQ-NILKEILNKNIDTIKESNLIEKSYKDKFDNT-------LIDKINELD 980
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 729 IKVKELEV--LQAKCNEQTKVIDNFTSQLKATEEKLL--DLDALQKASSEgksemekLRQQLEAAEKQIKHLEIEKNAES 804
Cdd:TIGR01612 981 KAFKDASLndYEAKNNELIKYFNDLKANLGKNKENMLyhQFDEKEKATND-------IEQKIEDANKNIPNIEIAIHTSI 1053
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 805 SKASSITRELQGRELKLTN------LQENLSEVSQVKDTLE----------------KELQILKEKFAEASEEAVSVQRS 862
Cdd:TIGR01612 1054 YNIIDEIEKEIGKNIELLNkeileeAEINITNFNEIKEKLKhynfddfgkeenikyaDEINKIKDDIKNLDQKIDHHIKA 1133
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 863 MQETVNKLHQKEEQFNMLSSDLEKL------RENLAEMEAKFRE---KDEREEQLIKAKEKLENDIAEIMKmsgDNSSQL 933
Cdd:TIGR01612 1134 LEEIKKKSENYIDEIKAQINDLEDVadkaisNDDPEEIEKKIENivtKIDKKKNIYDEIKKLLNEIAEIEK---DKTSLE 1210
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 934 TKMNDEL----RLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKELERKL-----SDLEKKM 1004
Cdd:TIGR01612 1211 EVKGINLsygkNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETfnishDDDKDHH 1290
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1005 ETSHNQCQELKAGYEKATSETKTKHEEI-LQNLRKTLldtEDKLKGAREENSGLLQELEELRKQADKAKsltylLTSAKK 1083
Cdd:TIGR01612 1291 IISKKHDENISDIREKSLKIIEDFSEESdINDIKKEL---QKNLLDAQKHNSDINLYLNEIANIYNILK-----LNKIKK 1362
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1084 EIELMSEELRGL-KSEKQLLSQEGNDLKL-----ENGSLLSKLVELEAKIallqgDQQKLWSVNETLNLEKEKFLEEKQD 1157
Cdd:TIGR01612 1363 IIDEVKEYTKEIeENNKNIKDELDKSEKLikkikDDINLEECKSKIESTL-----DDKDIDECIKKIKELKNHILSEESN 1437
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1158 AEKHYEQEHLNKEVLAVerekLLKEINVAQ---EELLKINMENdslqaSKVSMQTLIEELQLSKDaliaKTEKDQEErdh 1234
Cdd:TIGR01612 1438 IDTYFKNADENNENVLL----LFKNIEMADnksQHILKIKKDN-----ATNDHDFNINELKEHID----KSKGCKDE--- 1501
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1235 lADQIKKLITENFILAKDKDDIIQKLQSSYEELV---------KDQKALVQDIEDL----TAEKKSALEKLSNLDNTCIA 1301
Cdd:TIGR01612 1502 -ADKNAKAIEKNKELFEQYKKDVTELLNKYSALAiknkfaktkKDSEIIIKEIKDAhkkfILEAEKSEQKIKEIKKEKFR 1580
|
1050
....*....|...
gi 1622847176 1302 LKverDNALQNNR 1314
Cdd:TIGR01612 1581 IE---DDAAKNDK 1590
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
405-860 |
1.00e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLlfEKTKADKLQ 484
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL--EKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 485 RELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnkpagdvdmslSLLQEISSLQEKLE----VTRTDHQREIT 560
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEELRELEEELE------------ELEAELAELQEELEelleQLSLATEEELQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 561 SLKEHFG---AREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKG 637
Cdd:COG4717 196 DLAEELEelqQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 638 LGTETAEFAELKTQIEKMRLdyqheiENLQNQQDSERSAHAKEMEALRAKlmkvikekenSLEAIKSKLDKAEDQHLVEM 717
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAR------EKASLGKEAEELQALPALEELEEE----------ELEELLAALGLPPDLSPEEL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 718 EETLNKLQEAEIKVKELEVL--QAKCNEQTKVIDNFTSQLKAT-EEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIK 794
Cdd:COG4717 340 LELLDRIEELQELLREAEELeeELQLEELEQEIAALLAEAGVEdEEELRAALEQAEEYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 795 HLEIEKNAES--SKASSITRELQGRELKLTNLQENLSEVSQVKDTLEK---------ELQILKEKFAEASEEAVSVQ 860
Cdd:COG4717 420 ELLEALDEEEleEELEELEEELEELEEELEELREELAELEAELEQLEEdgelaellqELEELKAELRELAEEWAALK 496
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1102-1324 |
1.21e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 47.23 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1102 LSQEGNDLKLENgsLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEkqdAEKHYEQEHlnkevlaverEKLLK 1181
Cdd:PRK05771 36 LKEELSNERLRK--LRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEE---LIKDVEEEL----------EKIEK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1182 EINVAQEELLKINMENDSLQASKVSMQTL------IEELQLSK--DALIAKTEKDQEERDHLADQIKKLITEN------- 1246
Cdd:PRK05771 101 EIKELEEEISELENEIKELEQEIERLEPWgnfdldLSLLLGFKyvSVFVGTVPEDKLEELKLESDVENVEYIStdkgyvy 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1247 ---FILAKDKDDI--------IQKLQSSYEELVKDQ-KALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNR 1314
Cdd:PRK05771 181 vvvVVLKELSDEVeeelkklgFERLELEEEGTPSELiREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIEL 260
|
250
....*....|
gi 1622847176 1315 DLQLETDMLL 1324
Cdd:PRK05771 261 ERAEALSKFL 270
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
348-604 |
1.22e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 348 SGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQLRTMVEAADREKVEL 427
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-----------ALERRIAALARRIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 428 LNQLEEEKRKVEDLQFRVEEEsitKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKD 507
Cdd:COG4942 82 EAELAELEKEIAELRAELEAQ---KEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 508 LalrvQEVAELRRRLESNKPAGDvdmslSLLQEISSLQEKLEVTRTDHQREITSLKehfgAREETHQKEIKALYTATEKL 587
Cdd:COG4942 159 L----AELAALRAELEAERAELE-----ALLAELEEERAALEALKAERQKLLARLE----KELAELAAELAELQQEAEEL 225
|
250
....*....|....*..
gi 1622847176 588 SKENESLKSKLEHANKE 604
Cdd:COG4942 226 EALIARLEAEAAAAAER 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
426-1284 |
1.27e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.48 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 426 ELLNQLEEEKRKVEDLQFRVEEESitkgdleTQTKLEHARIKElEQSLLFEKTKAD-KLQRELEDTRVATVSEKSRIMEL 504
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESEL-------KELEKKHQQLCE-EKNALQEQLQAEtELCAEAEEMRARLAARKQELEEI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 505 EKDLALRVQEVAELRRRLESNKPagdvdmslSLLQEISSLQEKL---EVTRTDHQREITSLKehfgAREETHQKEIKALY 581
Cdd:pfam01576 77 LHELESRLEEEEERSQQLQNEKK--------KMQQHIQDLEEQLdeeEAARQKLQLEKVTTE----AKIKKLEEDILLLE 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 582 TATEKLSKENESLKSKLEHAN------KENSDVIALWKSKLETAIASHQ----------QAMEELKVSFSKGLGTETAEF 645
Cdd:pfam01576 145 DQNSKLSKERKLLEERISEFTsnlaeeEEKAKSLSKLKNKHEAMISDLEerlkkeekgrQELEKAKRKLEGESTDLQEQI 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 646 AELKTQIEKMRLDYQHEIENLQNQQDS----------------ERSAHAKEME-------ALRAKLMKVIKEKENSLEAI 702
Cdd:pfam01576 225 AELQAQIAELRAQLAKKEEELQAALARleeetaqknnalkkirELEAQISELQedleserAARNKAEKQRRDLGEELEAL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 703 KSKLDKAEDQHLVEME---------ETLNKLQEAEIKVKELEVLQAKcNEQTKVIDNFTSQLKATEEKLLDLD----ALQ 769
Cdd:pfam01576 305 KTELEDTLDTTAAQQElrskreqevTELKKALEEETRSHEAQLQEMR-QKHTQALEELTEQLEQAKRNKANLEkakqALE 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 770 KASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKelqilkeKF 849
Cdd:pfam01576 384 SENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEG-------KN 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 850 AEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDN 929
Cdd:pfam01576 457 IKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEED 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 930 SSQL-------TKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQeaaekheeekkelerKLSDLEK 1002
Cdd:pfam01576 537 AGTLealeegkKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQ---------------LVSNLEK 601
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1003 KMETSHNQCQELKA-------GYEKATSETKTKHEEILqNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLT 1075
Cdd:pfam01576 602 KQKKFDQMLAEEKAisaryaeERDRAEAEAREKETRAL-SLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNV 680
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1076 YLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLE---NGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFL 1152
Cdd:pfam01576 681 HELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRlevNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELED 760
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1153 EEKQDAEKHYEQEHLNKEVLAVE---------REKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEE---------- 1213
Cdd:pfam01576 761 ERKQRAQAVAAKKKLELDLKELEaqidaankgREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKEsekklknlea 840
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1214 --LQLSKDALIAKTEKDQ--EERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQ----------KALVQDIE 1279
Cdd:pfam01576 841 elLQLQEDLAASERARRQaqQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQsntellndrlRKSTLQVE 920
|
....*
gi 1622847176 1280 DLTAE 1284
Cdd:pfam01576 921 QLTTE 925
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1648-2099 |
1.37e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1648 QEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKtlKSDFAALSKSKAELQELHSCLTKI- 1726
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAK--KAAEAAKAEAEAAADEAEAAEEKAe 1367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1727 LDDLQLNHEVTLAEKAQVMQDNQ---NLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNShisanLLESQNE 1803
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKkkaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE-----AKKKAEE 1442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1804 NRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELN 1883
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAK 1522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1884 KSKELLTVEN-QKMEEFRKEIETLKQAAAQKSQQLSalQEENVKLAEELGRS-RDEVTSHQKLEEERSVLNNQLLEMKKS 1961
Cdd:PTZ00121 1523 KADEAKKAEEaKKADEAKKAEEKKKADELKKAEELK--KAEEKKKAEEAKKAeEDKNMALRKAEEAKKAEEARIEEVMKL 1600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1962 LPSNTLRESKFIKDADEEKA---SLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKL--- 2035
Cdd:PTZ00121 1601 YEEEKKMKAEEAKKAEEAKIkaeELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAeea 1680
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 2036 ---ELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVE 2099
Cdd:PTZ00121 1681 kkaEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE 1747
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1536-2043 |
1.57e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.96 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1536 ERKNENQE-LVASKCDLSLMLKEAQNAKKNLEKehthILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEM 1614
Cdd:PRK02224 223 ERYEEQREqARETRDEADEVLEEHEERREELET----LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1615 QQSLILEqearAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQ 1694
Cdd:PRK02224 299 LAEAGLD----DADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEE 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1695 LAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEmmlEKDELLKEKEMLAE 1774
Cdd:PRK02224 375 AREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRT---ARERVEEAEALLEA 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1775 SYFilqKEISQLAKTNSHISA------NLLESQNENRTLRKDKNKLTLKIRELETLQSFTA--------AQTAEDAMQIM 1840
Cdd:PRK02224 452 GKC---PECGQPVEGSPHVETieedreRVEELEAELEDLEEEVEEVEERLERAEDLVEAEDrierleerREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1841 EQMTKEKTETLASLEDTKQtnaKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQ------AAAQKS 1914
Cdd:PRK02224 529 RETIEEKRERAEELRERAA---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERirtllaAIADAE 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1915 QQLSALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKSLPSNTLRE-SKFIKDADEEKASLQKSI-S 1988
Cdd:PRK02224 606 DEIERLREKREALAELNDERRERLAEkrerKRELEAEFDEARIEEAREDKERAEEYLEQvEEKLDELREERDDLQAEIgA 685
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 1989 ITSALltekdAELEKLRNEVTVLRGENASAKSLHSVVQTLES--DKVKLELKVKNLE 2043
Cdd:PRK02224 686 VENEL-----EELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1526-2051 |
1.57e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1526 NIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQ 1605
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1606 KLSEEiqEMQQSLILEQEARAKEKESS-LYENNQLHGRMVLLEQEVEELRVCTEELQSE--KFVLLQEKTKSEQEVAEII 1682
Cdd:PRK01156 264 DLSME--LEKNNYYKELEERHMKIINDpVYKNRNYINDYFKYKNDIENKKQILSNIDAEinKYHAIIKKLSVLQKDYNDY 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1683 EEKELLTAEAAQLAAHIKTLKSDFAALSKS-----------KAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNL 1751
Cdd:PRK01156 342 IKKKSRYDDLNNQILELEGYEMDYNSYLKSieslkkkieeySKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDI 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1752 LAEKSEMMLEKDELLKEKEMLAESYFILQKEiSQLAKTNSHI----SANLLESQNEnrtlrkDKNKLTLKIRELETLQSf 1827
Cdd:PRK01156 422 SSKVSSLNQRIRALRENLDELSRNMEMLNGQ-SVCPVCGTTLgeekSNHIINHYNE------KKSRLEEKIREIEIEVK- 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1828 TAAQTAEDAMQIMEQMTKEKTETLAS----LEDTKQTNAKLQNELDTLKENNLKNVEELNKSKEL-LTVENQKMEEFRK- 1901
Cdd:PRK01156 494 DIDEKIVDLKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLkLEDLDSKRTSWLNa 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1902 -------EIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQ--LLEMKKSLPSNTLRESK 1971
Cdd:PRK01156 574 lavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiREIENEANNLNNKynEIQENKILIEKLRGKID 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1972 FIKDADEEKASLQKSISITSALLTEKDAELEKLRNEvtvLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKR 2051
Cdd:PRK01156 654 NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
771-1115 |
1.62e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 47.14 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 771 ASSEGKsemeklrQQLEAAEKQIKHLEIEKNAESSKASSitrELQGRELKlTNLQENLSEVSQVKDTLEKELQILKEKFA 850
Cdd:NF012221 1536 ATSESS-------QQADAVSKHAKQDDAAQNALADKERA---EADRQRLE-QEKQQQLAAISGSQSQLESTDQNALETNG 1604
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 851 EASEEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKL----RENLAEmeakfREKDEREEQLIKAKEKLENDIAEIMKM 925
Cdd:NF012221 1605 QAQRDAILEeSRAVTKELTTLAQGLDALDSQATYAGESgdqwRNPFAG-----GLLDRVQEQLDDAKKISGKQLADAKQR 1679
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 926 SGDNSSQLTKMndelrlkeryVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEKKElerklsdlEKKME 1005
Cdd:NF012221 1680 HVDNQQKVKDA----------VAKSEAGVAQGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQA--------ESDAN 1741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1006 TSHNQCQelKAGyEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRkqaDKAKSLTYLLTSAKKEI 1085
Cdd:NF012221 1742 AAANDAQ--SRG-EQDASAAENKANQAQADAKGAKQDESDKPNRQGAAGSGLSGKAYSVE---GVAEPGSHINPDSPAAA 1815
|
330 340 350
....*....|....*....|....*....|....*.
gi 1622847176 1086 ------ELMSEELRGLKSEKQLLsqegNDLKLENGS 1115
Cdd:NF012221 1816 dgrfseGLTEQEQEALEGATNAV----NRLQINAGS 1847
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2130-2147 |
1.90e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.90e-04
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1659-1955 |
2.19e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1659 ELQSEKFVLLQEKTKSEQEVaeiieEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTL 1738
Cdd:TIGR02168 206 ERQAEKAERYKELKAELREL-----ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1739 AEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKI 1818
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1819 RELETLQ--SFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKElltvenqkm 1896
Cdd:TIGR02168 361 EELEAELeeLESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE--------- 431
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 1897 eefRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQL 1955
Cdd:TIGR02168 432 ---EAELKELQAELEELEEELEELQEELERLEEALEELREEL---EEAEQALDAAEREL 484
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1351-2060 |
2.27e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.61 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1351 LRAQLDDASKALRKAELetmqLQATNTSLTKLLEEIKARRAvtdseciqlLHEKETLAASERRllaekEELLSENRIITE 1430
Cdd:COG5022 760 LRRRYLQALKRIKKIQV----IQHGFRLRRLVDYELKWRLF---------IKLQPLLSLLGSR-----KEYRSYLACIIK 821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1431 KlhkcseeaahTEMSLNEKITYLTSEKEMASQKMT---------KLKKHQDSLLKEKSALETQNGVLLAERENSIKaigd 1501
Cdd:COG5022 822 L----------QKTIKREKKLRETEEVEFSLKAEVliqkfgrslKAKKRFSLLKKETIYLQSAQRVELAERQLQEL---- 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1502 lkrqcDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELvasKCDLSLMLKEAQNAK-----KNLEKEHTHILQAK 1576
Cdd:COG5022 888 -----KIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEF---KTELIARLKKLLNNIdleegPSIEYVKLPELNKL 959
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1577 ENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSL--ILEQEARAKEKESSLYENNQ----LHGRMVLLEQEV 1650
Cdd:COG5022 960 HEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELaeLSKQYGALQESTKQLKELPVevaeLQSASKIISSES 1039
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1651 EELRVCTeELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLaAHIKTLKSDFAALSKSKAELQELHSCL----TKI 1726
Cdd:COG5022 1040 TELSILK-PLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQL-YQLESTENLLKTINVKDLEVTNRNLVKpanvLQF 1117
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1727 LDDLQLNHEVTLAEKAQVMQDNQNLLAEK---SEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHI-SANLLESQN 1802
Cdd:COG5022 1118 IVAQMIKLNLLQEISKFLSQLVNTLEPVFqklSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALyDEKSKLSSS 1197
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1803 ENRTLRKDKNKLTLKIRELETLQSFTAAQTAEdAMQIMEQMTKEKTETlaSLEDTKQTNAKLQNEldtlkennlKNVEEL 1882
Cdd:COG5022 1198 EVNDLKNELIALFSKIFSGWPRGDKLKKLISE-GWVPTEYSTSLKGFN--NLNKKFDTPASMSNE---------KLLSLL 1265
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1883 NKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENV--KLAEELGRSRDEVtSHQKLEEERSVLNNQLLEMKK 1960
Cdd:COG5022 1266 NSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLrwKSATEVNYNSEEL-DDWCREFEISDVDEELEELIQ 1344
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1961 SLPSNTLRESKfIKDADEekaslqksisITSALLTEKDAELEKLRNEVTVLRGENASAKslhSVVQTLESDKVKLELKVK 2040
Cdd:COG5022 1345 AVKVLQLLKDD-LNKLDE----------LLDACYSLNPAEIQNLKSRYDPADKENNLPK---EILKKIEALLIKQELQLS 1410
|
730 740
....*....|....*....|
gi 1622847176 2041 NLELQLKENKRQLSSSSGNT 2060
Cdd:COG5022 1411 LEGKDETEVHLSEIFSEEKS 1430
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1257-1997 |
2.51e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.25 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1257 IQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLsNLDNTCIALKVERDnaLQNNRDLQLETDMLLHDQEKLNASLQA 1336
Cdd:pfam05483 90 IKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQEL-QFENEKVSLKLEEE--IQENKDLIKENNATRHLCNLLKETCAR 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1337 ALQVKQLLRSEASGLRAQLDDASKALRK--AELETMQLQATNTSLTK--LLEEIKARRAVTDSECIQLLHEKETLAASER 1412
Cdd:pfam05483 167 SAEKTKKYEYEREETRQVYMDLNNNIEKmiLAFEELRVQAENARLEMhfKLKEDHEKIQHLEEEYKKEINDKEKQVSLLL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1413 RLLAEKEE-------LLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQN 1485
Cdd:pfam05483 247 IQITEKENkmkdltfLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1486 GVLLAERENSIKaigdlkrQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQElvaskcDLSLMLKEAQNAKKNL 1565
Cdd:pfam05483 327 CQLTEEKEAQME-------ELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNED------QLKIITMELQKKSSEL 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1566 EkEHTHILQAKENLDAELNTCCSEKNILLRDslnlQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVL 1645
Cdd:pfam05483 394 E-EMTKFKNNKEVELEELKKILAEDEKLLDE----KKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1646 LEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHsclTK 1725
Cdd:pfam05483 469 YLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKE---MN 545
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1726 ILDDLQLNHEVTLAEKAQVMQDNQNllAEKSEMMLEKDELLKEKEMLaesyfILQKEISQLAKTNSHISANLLESQNENR 1805
Cdd:pfam05483 546 LRDELESVREEFIQKGDEVKCKLDK--SEENARSIEYEVLKKEKQMK-----ILENKCNNLKKQIENKNKNIEELHQENK 618
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1806 TLRKDKNKLTLKIRELETlqsftaaqtaedamqimeQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1885
Cdd:pfam05483 619 ALKKKGSAENKQLNAYEI------------------KVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKA 680
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1886 KelltVENQKMEEFRKEIETLKQaaaQKSQQLSALQEENVKLAEELGRSRD-EVTSHQKLEEERSVLNNQLLEMKKSLPS 1964
Cdd:pfam05483 681 K----AIADEAVKLQKEIDKRCQ---HKIAEMVALMEKHKHQYDKIIEERDsELGLYKNKEQEQSSAKAALEIELSNIKA 753
|
730 740 750
....*....|....*....|....*....|...
gi 1622847176 1965 NTLRESKFIKDADEEKASLQKSISITSALLTEK 1997
Cdd:pfam05483 754 ELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1544-1919 |
2.71e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.43 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1544 LVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLILEQE 1623
Cdd:PLN02939 30 RLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1624 ARAKEKESSLYENNQLHGrmVLLEQEVEELRvcteelQSEKFVLL--QEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKT 1701
Cdd:PLN02939 110 AIDNEQQTNSKDGEQLSD--FQLEDLVGMIQ------NAEKNILLlnQARLQALEDLEKILTEKEALQGKINILEMRLSE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1702 LKSDFAALSKSKAELQELHSCLTKILDDLQLNHEvtlAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLA------ES 1775
Cdd:PLN02939 182 TDARIKLAAQEKIHVEILEEQLEKLRNELLIRGA---TEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIevaeteER 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1776 YFILQKEISQLAKTNSHISANLLESQNEnrTLRKDKNKLTLKIRELETLQSF--TAAQTAEDAMQIMEQMT--KEKTETL 1851
Cdd:PLN02939 259 VFKLEKERSLLDASLRELESKFIVAQED--VSKLSPLQYDCWWEKVENLQDLldRATNQVEKAALVLDQNQdlRDKVDKL 336
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 1852 -ASLEDTKQTnaKLQNELDTLKENNLKNVEE-LNKSKE----LLTVENQKMEEFRKEIETLKQAAAQKSQQLSA 1919
Cdd:PLN02939 337 eASLKEANVS--KFSSYKVELLQQKLKLLEErLQASDHeihsYIQLYQESIKEFQDTLSKLKEESKKRSLEHPA 408
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
355-799 |
3.28e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 355 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHvlELEAKMDQLRTMVEAADREKVELLNQLEEE 434
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 435 KRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMElEKDLALRVQE 514
Cdd:COG4717 159 RELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEE-ELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 515 VAELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSL----KEHFGAREETHQKEIKALYTATEKLSKE 590
Cdd:COG4717 238 AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLlallFLLLAREKASLGKEAEELQALPALEELE 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 591 NESLKSKLEHANKENSDVIALWKSKLETaIASHQQAMEELkvsfskglgtetaefAELKTQIEkmRLDYQHEIENLQNQq 670
Cdd:COG4717 318 EEELEELLAALGLPPDLSPEELLELLDR-IEELQELLREA---------------EELEEELQ--LEELEQEIAALLAE- 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 671 dsersAHAKEMEALRAKLMKviKEKENSLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKvKELEVLQAKCNEQTKVIDN 750
Cdd:COG4717 379 -----AGVEDEEELRAALEQ--AEEYQELKEELEELEEQLEELLGELEELLEALDEEELE-EELEELEEELEELEEELEE 450
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1622847176 751 FTSQLKATEEKLLDLdalqkassEGKSEMEKLRQQLEAAEKQIKHLEIE 799
Cdd:COG4717 451 LREELAELEAELEQL--------EEDGELAELLQELEELKAELRELAEE 491
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1027-1954 |
3.34e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1027 TKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQeg 1106
Cdd:TIGR00606 182 TRYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEH-- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1107 ndlklengsLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHlNKEVLAVEREKLlkeinVA 1186
Cdd:TIGR00606 260 ---------NLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNH-QRTVREKERELV-----DC 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1187 QEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSYEE 1266
Cdd:TIGR00606 325 QRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1267 lvKDQKALVQDIEDLTAEKKSALEKLSNLdntcialkveRDNALQNNRDLQLETDMLLHDQEKLNASL----QAALQVKQ 1342
Cdd:TIGR00606 405 --DEAKTAAQLCADLQSKERLKQEQADEI----------RDEKKGLGRTIELKKEILEKKQEELKFVIkelqQLEGSSDR 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1343 LLRSEASgLRAQLDDASKALRKAELETMQLQATNTSLTKLleEIKARRAVTDSECIQLLHEKETLAASErrlLAEKEELL 1422
Cdd:TIGR00606 473 ILELDQE-LRKAERELSKAEKNSLTETLKKEVKSLQNEKA--DLDRKLRKLDQEMEQLNHHTTTRTQME---MLTKDKMD 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1423 SENRIITEKLHKCSEEAAHTEMSLNEKIT-----YLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIK 1497
Cdd:TIGR00606 547 KDEQIRKIKSRHSDELTSLLGYFPNKKQLedwlhSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYED 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1498 AIGDLKRQCDQESanrriivqenmkllgNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKe 1577
Cdd:TIGR00606 627 KLFDVCGSQDEES---------------DLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTE- 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1578 nldAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELR--V 1655
Cdd:TIGR00606 691 ---AELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKndI 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1656 CTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEA----AQLAAHIKTLKSDFaALSKSKAELQELHSCLTKILDDLQ 1731
Cdd:TIGR00606 768 EEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVerkiAQQAAKLQGSDLDR-TVQQVNQEKQEKQHELDTVVSKIE 846
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1732 LNHEVTlAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLaktNSHISANLLESQNENRTLRKDK 1811
Cdd:TIGR00606 847 LNRKLI-QDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSL---IREIKDAKEQDSPLETFLEKDQ 922
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1812 NKLTLKIRELEtlqsfTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNEldtLKENNLKNVE-ELNKSKELLT 1890
Cdd:TIGR00606 923 QEKEELISSKE-----TSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLK---QKETELNTVNaQLEECEKHQE 994
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1891 VENQKMEEFRKEIETLKQAAA---------QKSQQLSALQEENVKLAEELGRSR--DEVTSHQKLEEERSVLNNQ 1954
Cdd:TIGR00606 995 KINEDMRLMRQDIDTQKIQERwlqdnltlrKRENELKEVEEELKQHLKEMGQMQvlQMKQEHQKLEENIDLIKRN 1069
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
419-631 |
3.70e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 419 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEK 498
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 499 SRIMELEKDLALRVQEVAELRRR-----LESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgareeth 573
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQpplalLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA--------- 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 574 qkEIKALYTATEKLSKENESLKSKLEHANKENSDVIAlwksKLETAIASHQQAMEELK 631
Cdd:COG4942 168 --ELEAERAELEALLAELEEERAALEALKAERQKLLA----RLEKELAELAAELAELQ 219
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
824-1170 |
3.97e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.28 E-value: 3.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 824 LQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDE 903
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 904 REEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAA 983
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 984 EKHEEEKKELERKLSDLEKKMEtshnqcQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEE 1063
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIE------SLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1064 LRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNET 1143
Cdd:COG4372 263 LELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADL 342
|
330 340
....*....|....*....|....*..
gi 1622847176 1144 LNLEKEKFLEEKQDAEKHYEQEHLNKE 1170
Cdd:COG4372 343 LQLLLVGLLDNDVLELLSKGAEAGVAD 369
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
670-896 |
4.14e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 670 QDSERSAHAKEMEALRAKlmkvIKEKENSLEAIKSKLDKAEDQhLVEMEETLNKLQEAEIKV-KELEVLQAKCNEQTKVI 748
Cdd:COG4942 18 QADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQ-LAALERRIAALARRIRALeQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 749 DNFTSQLKATEEKLLD-LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQEN 827
Cdd:COG4942 93 AELRAELEAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847176 828 LSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSM---QETVNKLHQKEEQFNMLSSDLEKLRENLAEMEA 896
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELaelAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1402-1787 |
4.24e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1402 HEKETLAASERRLLAEKEELLSENRIITE--KLHKCSEEAAhtEMSLNEKItyLTSEKEMASQKMT----------KLKK 1469
Cdd:PRK04863 277 HANERRVHLEEALELRRELYTSRRQLAAEqyRLVEMARELA--ELNEAESD--LEQDYQAASDHLNlvqtalrqqeKIER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1470 HQDSLLKEKSALETQNGVL------LAERENSIKA----IGDLKRQCdqesAN--RRIIVQENM---------------K 1522
Cdd:PRK04863 353 YQADLEELEERLEEQNEVVeeadeqQEENEARAEAaeeeVDELKSQL----ADyqQALDVQQTRaiqyqqavqalerakQ 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1523 LLGN----IDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKnlekEHTHILQAKENLDAEL--NTCCSEKNILLRD 1596
Cdd:PRK04863 429 LCGLpdltADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHS----QFEQAYQLVRKIAGEVsrSEAWDVARELLRR 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1597 SLNLQ---EECQKLSEEIQEMQQSLILEQEArakekESSLYENNQLHGRMVLLEQEVEELrvcTEELqsekfvllqektk 1673
Cdd:PRK04863 505 LREQRhlaEQLQQLRMRLSELEQRLRQQQRA-----ERLLAEFCKRLGKNLDDEDELEQL---QEEL------------- 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1674 sEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKilddLQLNHEVTLAEKAQVMQDNQNLLA 1753
Cdd:PRK04863 564 -EARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALAR----LREQSGEEFEDSQDVTEYMQQLLE 638
|
410 420 430
....*....|....*....|....*....|....
gi 1622847176 1754 EKSEMMLEKDELLKEKEMlaesyfiLQKEISQLA 1787
Cdd:PRK04863 639 RERELTVERDELAARKQA-------LDEEIERLS 665
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
832-1075 |
4.36e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 832 SQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKA 911
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 912 KEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQEAAEKHEEEkk 991
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLA---LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 992 elerklsdleKKMETSHNQCQELKAGYEKAtsetKTKHEEILQNLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1071
Cdd:COG4942 174 ----------AELEALLAELEEERAALEAL----KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
....
gi 1622847176 1072 KSLT 1075
Cdd:COG4942 240 AERT 243
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1050-1389 |
4.74e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 4.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1050 AREENSGLLQELEELRKQADKAKSL-TYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIa 1128
Cdd:PLN02939 37 ARRRGFSSQQKKKRGKNIAPKQRSSnSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQ- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1129 llqgdQQKLWSVNETLNLEKEKFLEEKQDAEKH---------YEQEHLNKevLAVEREKLLKEINVAQEELLKINMENDS 1199
Cdd:PLN02939 116 -----QTNSKDGEQLSDFQLEDLVGMIQNAEKNilllnqarlQALEDLEK--ILTEKEALQGKINILEMRLSETDARIKL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1200 LQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILakdKDDI------IQKLQSSYEELVKDQK- 1272
Cdd:PLN02939 189 AAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLL---KDDIqflkaeLIEVAETEERVFKLEKe 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1273 -----ALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQ--------EKLNASLQAA-- 1337
Cdd:PLN02939 266 rslldASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEKAALVLDQnqdlrdkvDKLEASLKEAnv 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 1338 ----LQVKQLLRSEASGLRAQLDDAS-KALRKAELETMQLQATNTSLTKLLEEIKAR 1389
Cdd:PLN02939 346 skfsSYKVELLQQKLKLLEERLQASDhEIHSYIQLYQESIKEFQDTLSKLKEESKKR 402
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
647-886 |
4.75e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 647 ELKTQIEKMRLDYQHEIENLQNQQDSERSAHAKEMEALrAKLMKVIKEKENSLEAIKSKLDKAEDQ---HLVEMEET--- 720
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI-ARKQNKYDELVEEAKTIKAEIEELTDEllnLVMDIEDPsaa 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 721 LNKLQEAEIKVK-ELEVLQ--AKCNEQTKVIDNFTSQLKATEEKLldldalqkasSEGKSEMEKLRQQLEAAEKQIKHLE 797
Cdd:PHA02562 257 LNKLNTAAAKIKsKIEQFQkvIKMYEKGGVCPTCTQQISEGPDRI----------TKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 798 iEKNAESSKASSITRELQGrelKLTNLQENLS-EVSQVKDtLEKELQILKEKFAEASEEAVSVQRSMQETVNKL--HQKE 874
Cdd:PHA02562 327 -EIMDEFNEQSKKLLELKN---KISTNKQSLItLVDKAKK-VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKseLVKE 401
|
250
....*....|..
gi 1622847176 875 EQFNMLSSDLEK 886
Cdd:PHA02562 402 KYHRGIVTDLLK 413
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1256-1720 |
4.76e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 4.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1256 IIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQ 1335
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1336 AALQVKQLLRseasgLRAQLDDASKALRKAELETMQLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKEtlaASERRLL 1415
Cdd:COG4717 127 LLPLYQELEA-----LEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE---EELQDLA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1416 AEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKityltsEKEMASQKMTKLKKHQDSLLKEKSAL-------------- 1481
Cdd:COG4717 199 EELEELQQRLAELEEELEEAQEELEELEEELEQL------ENELEAAALEERLKEARLLLLIAAALlallglggsllsli 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1482 ETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNA 1561
Cdd:COG4717 273 LTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1562 KKNLEKEHTHIL--QAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLilEQEARAKEKESSLYENNQL 1639
Cdd:COG4717 353 LREAEELEEELQleELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQL--EELLGELEELLEALDEEEL 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1640 HGRMVLLEQEVEELRVCTEELQSEKFVLLQE--KTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQ 1717
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAEleQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
...
gi 1622847176 1718 ELH 1720
Cdd:COG4717 511 EER 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1852-2053 |
4.84e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 4.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1852 ASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1931
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1932 GRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVL 2011
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1622847176 2012 RGENASAKslhsvvQTLESDKVKLELKVKNLELQLKENKRQL 2053
Cdd:COG4942 180 LAELEEER------AALEALKAERQKLLARLEKELAELAAEL 215
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
664-907 |
4.91e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 4.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 664 ENLQNQQDSERSAHA---KEMEALRAKLmkviKEKENSLEAIKSK-----LDKAEDQHLVEMEETLNKLQEAEIKVKELE 735
Cdd:COG3206 164 QNLELRREEARKALEfleEQLPELRKEL----EEAEAALEEFRQKnglvdLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 736 vlqakcneqtkvidnftSQLKATEEKLlDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 815
Cdd:COG3206 240 -----------------ARLAALRAQL-GSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 816 grelkltNLQENL-SEVSQVKDTLEKELQILKEKFAEASEEavsvQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEM 894
Cdd:COG3206 302 -------ALRAQLqQEAQRILASLEAELEALQAREASLQAQ----LAQLEARLAELPELEAELRRLEREVEVARELYESL 370
|
250
....*....|...
gi 1622847176 895 EAKFREKDEREEQ 907
Cdd:COG3206 371 LQRLEEARLAEAL 383
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
406-580 |
5.08e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 5.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 406 LEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDlqFRVEEESItkgDLETQTKLEHARIKELEQSLL-------FEKT 478
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEE--FRQKNGLV---DLSEEAKLLLQQLSELESQLAearaelaEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 479 KADKLQRELEDTR--VATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPagDVdmsLSLLQEISSLQEKLEVTRTDHQ 556
Cdd:COG3206 241 RLAALRAQLGSGPdaLPELLQSPVIQQLRAQLAELEAELAELSARYTPNHP--DV---IALRAQIAALRAQLQQEAQRIL 315
|
170 180
....*....|....*....|....
gi 1622847176 557 REITSLKEHFGAREETHQKEIKAL 580
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQL 339
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
999-1568 |
6.85e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.83 E-value: 6.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 999 DLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDTEDKLKGAREEnsglLQELEELRKQADKAKSLTY-- 1076
Cdd:pfam12128 269 SDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSE----LEALEDQHGAFLDADIETAaa 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1077 ---LLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSllsklvELEAKIALLQGDQQKLwsvnetlnleKEKFLE 1153
Cdd:pfam12128 345 dqeQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKE------QNNRDIAGIKDKLAKI----------REARDR 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1154 EKQDAEKHYEQEhlnKEVLAVEREKLLKEINVaQEELLKINMENDSLQASKVsmqTLIEELQLSKDALIAKTEKDQEERD 1233
Cdd:pfam12128 409 QLAVAEDDLQAL---ESELREQLEAGKLEFNE-EEYRLKSRLGELKLRLNQA---TATPELLLQLENFDERIERAREEQE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1234 HLADQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSN------------------- 1294
Cdd:pfam12128 482 AANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigkvispellh 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1295 ---LDNTCIALKVERDN----------ALQNNRDLQLEtDMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASK- 1360
Cdd:pfam12128 562 rtdLDPEVWDGSVGGELnlygvkldlkRIDVPEWAASE-EELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASRe 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1361 ------ALRKAELETMQLQATNTSLT-KLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRiiTEKLH 1433
Cdd:pfam12128 641 etfartALKNARLDLRRLFDEKQSEKdKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREAR--TEKQA 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1434 KCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRqcdQESANR 1513
Cdd:pfam12128 719 YWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAV---RRQEVL 795
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1514 RIIVQENMKLLGNIDALKKELQERKNENQELvasKCDLSLMLKEAQNAKKNLEKE 1568
Cdd:pfam12128 796 RYFDWYQETWLQRRPRLATQLSNIERAISEL---QQQLARLIADTKLRRAKLEME 847
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1186-1420 |
6.90e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1186 AQEELLKINMENDSLQASKVSMQTLIEELQLSKDALIAKTEKDQEERDHLADQIKKLITEnfilAKDKDDIIQKLQSSYE 1265
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE----LAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1266 ELVKDQKALVQDIEDLTAekksALEKLSNLDNtcIALKVERDNALQNNRDLQLETDMLLHDQEKLNAsLQAALQVKQLLR 1345
Cdd:COG4942 94 ELRAELEAQKEELAELLR----ALYRLGRQPP--LALLLSPEDFLDAVRRLQYLKYLAPARREQAEE-LRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1346 SEASGLRAQLDDASKALRKAELEtmqLQATNTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEE 1420
Cdd:COG4942 167 AELEAERAELEALLAELEEERAA---LEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1412-1787 |
7.10e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 7.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1412 RRLLAEKEELLSENRIITEklhkcsEEAAHTEMS-----LNEKITYLTSEKEMAS----------QKMTKLKKHQDSLLK 1476
Cdd:COG3096 285 ERALELRRELFGARRQLAE------EQYRLVEMAreleeLSARESDLEQDYQAASdhlnlvqtalRQQEKIERYQEDLEE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1477 EKSALETQNGVL------LAERE----------NSIKA-IGDLKRQCDqESANRRIIVQENMKLLGN-----------ID 1528
Cdd:COG3096 359 LTERLEEQEEVVeeaaeqLAEAEarleaaeeevDSLKSqLADYQQALD-VQQTRAIQYQQAVQALEKaralcglpdltPE 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1529 ALKKELQERKNENQELVASKCDLSLMLKEAQNAKKnlekEHTHILQAKENLDAEL--NTCCSEKNILLRDSLNLQ---EE 1603
Cdd:COG3096 438 NAEDYLAAFRAKEQQATEEVLELEQKLSVADAARR----QFEKAYELVCKIAGEVerSQAWQTARELLRRYRSQQalaQR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1604 CQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMvLLEQEVEELRVCTEELqsekfvllqektksEQEVAEIIE 1683
Cdd:COG3096 514 LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAE-ELEELLAELEAQLEEL--------------EEQAAEAVE 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1684 EKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQlnhevtlaekaQVMQDNQNLLAEKSEMMLEKD 1763
Cdd:COG3096 579 QRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQ-----------EVTAAMQQLLEREREATVERD 647
|
410 420
....*....|....*....|....
gi 1622847176 1764 ELLKEKEMlaesyfiLQKEISQLA 1787
Cdd:COG3096 648 ELAARKQA-------LESQIERLS 664
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
789-1095 |
7.48e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 7.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 789 AEKQIKHLEieknaesskassitRELQGRELKLTNLQENLSEVSQVKDTLEKELQILkEKFAEASEEAVSVqrsmQETVN 868
Cdd:COG4913 608 NRAKLAALE--------------AELAELEEELAEAEERLEALEAELDALQERREAL-QRLAEYSWDEIDV----ASAER 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 869 KLHQKEEQFNML---SSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKER 945
Cdd:COG4913 669 EIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR 748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 946 YVEELQLKLTKANENASFLQKSIEDmTLKAEQSQQeaaekheeekkelERKLSDLEKKM----ETSHNQCQELKAGYEKA 1021
Cdd:COG4913 749 ALLEERFAAALGDAVERELRENLEE-RIDALRARL-------------NRAEEELERAMrafnREWPAETADLDADLESL 814
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1022 TSetktkHEEILQNLRKT-LLDTEDKLKGAREENSGllQELEELRKQADKAKSltylltSAKKEIELMSEELRGL 1095
Cdd:COG4913 815 PE-----YLALLDRLEEDgLPEYEERFKELLNENSI--EFVADLLSKLRRAIR------EIKERIDPLNDSLKRI 876
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1522-2056 |
8.18e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.63 E-value: 8.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1522 KLLGNIDALKKELQERKNENQelvaskcDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQ 1601
Cdd:TIGR04523 37 QLEKKLKTIKNELKNKEKELK-------NLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKIN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1602 EECqKLSEEIQEMQQSLILEQEARAKEKESSLYENNqlhGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEI 1681
Cdd:TIGR04523 110 SEI-KNDKEQKNKLEVELNKLEKQKKENKKNIDKFL---TEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1682 IEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLE 1761
Cdd:TIGR04523 186 QKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1762 KDELLKEKEMLAESYFILQKEISQLAKTNSHISAnlLESQNENRTLRKDKNKLTLKIRELETLQSFTAA--QTAEDAMQI 1839
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISD--LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQnnKIISQLNEQ 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1840 MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKelltvenQKMEEFRKEIETLKQAAAQKSQQLSA 1919
Cdd:TIGR04523 344 ISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE-------SQINDLESKIQNQEKLNQQKDEQIKK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1920 LQEENVKLAEELGRSRDEVTSHQK----LEEERSVLNNQLlemkKSLPSNTLRESKFIKDADEEKASLQKSISITSALLT 1995
Cdd:TIGR04523 417 LQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELII----KNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELK 492
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1996 EKDAELEKLRNEVTVLRGENASAK----SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 2056
Cdd:TIGR04523 493 SKEKELKKLNEEKKELEEKVKDLTkkisSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
779-980 |
8.70e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 8.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 779 MEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFaeaseEAVS 858
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-----EKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 859 VQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEndiAEIMKMSGDNSSQLTKMND 938
Cdd:COG4717 123 KLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQDLAE 199
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1622847176 939 ELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 980
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAL 241
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1621-2022 |
9.40e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 9.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1621 EQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSE--QEVAEIIEEKELLTAEAAQLAAH 1698
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1699 IKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQ----VMQDNQNLLAEKSEMMLEKDELLKEKEMLAE 1774
Cdd:COG4717 155 LEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEeleeLQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1775 SYFILQ-----KEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTE 1849
Cdd:COG4717 235 ELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALE 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1850 TLASLEdtkqtnakLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQlSALQEENVKLAE 1929
Cdd:COG4717 315 ELEEEE--------LEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA-ALLAEAGVEDEE 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1930 ELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESKfiKDADEEKASLQKSISITSALLTEKDAELEKLRNEVT 2009
Cdd:COG4717 386 ELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE--EELEEELEELEEELEELEEELEELREELAELEAELE 463
|
410
....*....|...
gi 1622847176 2010 VLRGENASAKSLH 2022
Cdd:COG4717 464 QLEEDGELAELLQ 476
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1746-2092 |
1.06e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1746 QDNQNLLAEKSEMMLEKDELLKEKEMLaESYFILQKEISQLAKTNSHISanllESQNENRTLRKDKNKLTLKIRELE--- 1822
Cdd:COG3206 64 QSSDVLLSGLSSLSASDSPLETQIEIL-KSRPVLERVVDKLNLDEDPLG----EEASREAAIERLRKNLTVEPVKGSnvi 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1823 --TLQSFTAAQTAEDAMQIMEQMTKEKTEtlASLEDTKQTNAKLQNELDTLKennlknveelnksKELLTVEnQKMEEFR 1900
Cdd:COG3206 139 eiSYTSPDPELAAAVANALAEAYLEQNLE--LRREEARKALEFLEEQLPELR-------------KELEEAE-AALEEFR 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1901 KE--IETLKQAAAQKSQQLSALQEENVKLAEELgrsrdevtshQKLEEERSVLNNQLLEMKKSLPSntLRESKFIKDADE 1978
Cdd:COG3206 203 QKngLVDLSEEAKLLLQQLSELESQLAEARAEL----------AEAEARLAALRAQLGSGPDALPE--LLQSPVIQQLRA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1979 EKASLQKSISITSALLTEKDAELEKLRNEVTVLRGEnaSAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSG 2058
Cdd:COG3206 271 QLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ--LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
330 340 350
....*....|....*....|....*....|....
gi 1622847176 2059 NTDTQADEDERAQESQQMIDFLnsvivdLQRKNQ 2092
Cdd:COG3206 349 LEAELRRLEREVEVARELYESL------LQRLEE 376
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1454-1718 |
1.14e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1454 TSEKEMASQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKE 1533
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1534 LQERKNENQELVASkcdlslMLKEAQNAKKNLekehthILQAKENLDAelntccseknilLRDSLNLQEECQKLSEEIQE 1613
Cdd:COG4942 99 LEAQKEELAELLRA------LYRLGRQPPLAL------LLSPEDFLDA------------VRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1614 MQQSLileQEARAKEKEsslyennqlhgrmvlLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAA 1693
Cdd:COG4942 155 LRADL---AELAALRAE---------------LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELA 216
|
250 260
....*....|....*....|....*
gi 1622847176 1694 QLAAHIKTLKSDFAALSKSKAELQE 1718
Cdd:COG4942 217 ELQQEAEELEALIARLEAEAAAAAE 241
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
653-859 |
1.26e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 653 EKMRLDYQHEIENlqnqqDSERSAHAKEMEALRAKlmkvikekENSLEAIKSKLDKAEDQHLVE--------MEETLNKL 724
Cdd:COG2433 319 EKLHLAREYGYDN-----DHERDALAAALKAYDAY--------KNKFERVEKKVPPDVDRDEVKarvirglsIEEALEEL 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 725 QEAEIKVKELEVLQAKCNEQTkvidnftsQLKATEEKLLDLDALQKassEGKSEMEKLRQQLEAAEKQIKHLEIEKNAES 804
Cdd:COG2433 386 IEKELPEEEPEAEREKEHEER--------ELTEEEEEIRRLEEQVE---RLEAEVEELEAELEEKDERIERLERELSEAR 454
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 805 SKASS---ITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKE-KFAEASEEAVSV 859
Cdd:COG2433 455 SEERReirKDREISRLDREIERLERELEEERERIEELKRKLERLKElWKLEHSGELVPV 513
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1647-1799 |
1.27e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1647 EQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAEAAQL-AAHIKTLKSDFAALSKSKAELQELHSCLTK 1725
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEA 366
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 1726 ILDDLQLNHEVTLAE----KAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLE 1799
Cdd:COG4913 367 LLAALGLPLPASAEEfaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
820-1684 |
1.39e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.88 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 820 KLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEME---A 896
Cdd:TIGR00606 183 RYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEhnlS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 897 KFREKDEREEQLIKAKEKLENDIAEI-MKMSGDNSSQLTKMND-------ELRLKERYVEELQLKLTKANENASFLQKS- 967
Cdd:TIGR00606 263 KIMKLDNEIKALKSRKKQMEKDNSELeLKMEKVFQGTDEQLNDlyhnhqrTVREKERELVDCQRELEKLNKERRLLNQEk 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 968 ------IEDMTLKAEQSQQEAAEKHEEEKKELERKL-------SDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQ 1034
Cdd:TIGR00606 343 tellveQGRLQLQADRHQEHIRARDSLIQSLATRLEldgfergPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKER 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1035 NLRKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGN------- 1107
Cdd:TIGR00606 423 LKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLtetlkke 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1108 --DLKLENGSLLSKLVELEAKIALLQGDQQklwSVNETLNLEKEKFLEEKQDAEKHYEQEHL---------NKEVLAVER 1176
Cdd:TIGR00606 503 vkSLQNEKADLDRKLRKLDQEMEQLNHHTT---TRTQMEMLTKDKMDKDEQIRKIKSRHSDEltsllgyfpNKKQLEDWL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1177 EKLLKEINVAQEELLKINMENDSLQASKVSMQTLIEELQLSKDAL------IAKTEKDQEERDHLADQIKKLITENFILA 1250
Cdd:TIGR00606 580 HSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYedklfdVCGSQDEESDLERLKEEIEKSSKQRAMLA 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1251 KDKDDIIQKLQSSYEE----------LVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLET 1320
Cdd:TIGR00606 660 GATAVYSQFITQLTDEnqsccpvcqrVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSII 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1321 DMLLHDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELetmqLQATNTSLTKLLEEIKARRAVTDSECIQL 1400
Cdd:TIGR00606 740 DLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKV----CLTDVTIMERFQMELKDVERKIAQQAAKL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1401 lhEKETLAASERRLLAEKEELLSENRIIT---EKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKmtklkkhqdslLKE 1477
Cdd:TIGR00606 816 --QGSDLDRTVQQVNQEKQEKQHELDTVVskiELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTN-----------LQR 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1478 KSALETQNGVLLAERENSIKAIGDLKRQCDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASK--------- 1548
Cdd:TIGR00606 883 RQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIhgymkdien 962
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1549 -----CDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNT----CCSEKNILLRDSLNLQEECQKLSE-------EIQ 1612
Cdd:TIGR00606 963 kiqdgKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRqdidTQKIQERWLQDNLTLRKRENELKEveeelkqHLK 1042
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622847176 1613 EMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVE-ELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEE 1684
Cdd:TIGR00606 1043 EMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEkEIKHFKKELREPQFRDAEEKYREMMIVMRTTEL 1115
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
479-945 |
1.49e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 479 KADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPagdvdmSLSLLQEISSLQEKLEvtrtdhqRE 558
Cdd:PRK04863 287 EALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASD------HLNLVQTALRQQEKIE-------RY 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 559 ITSLKEHFGAREEthQKEIKALytATEKLskenESLKSKLEHANKENSDvialwkskLETAIASHQQAMEELkvsfskgl 638
Cdd:PRK04863 354 QADLEELEERLEE--QNEVVEE--ADEQQ----EENEARAEAAEEEVDE--------LKSQLADYQQALDVQ-------- 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 639 gtetaefaelktqiEKMRLDYQHEIENLQ-----NQQDSERSAHAKEM-EALRAKLmkviKEKENSLEAIKSKLDKAEDq 712
Cdd:PRK04863 410 --------------QTRAIQYQQAVQALErakqlCGLPDLTADNAEDWlEEFQAKE----QEATEELLSLEQKLSVAQA- 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 713 HLVEMEETLNKLQEAeikVKELEVLQAKcneqtkviDNFTSQLKATEEKLLDLDALQKASSEgKSEMEKLRQQLEAAEKQ 792
Cdd:PRK04863 471 AHSQFEQAYQLVRKI---AGEVSRSEAW--------DVARELLRRLREQRHLAEQLQQLRMR-LSELEQRLRQQQRAERL 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 793 IKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAvSVQRSMQETVNKL-- 870
Cdd:PRK04863 539 LAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARA-PAWLAAQDALARLre 617
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847176 871 HQKEEQFNmlSSDLEKLRENLAEMEAKFR-EKDEREEQlikaKEKLEndiAEIMKMSGDNSSQLTKMNdelRLKER 945
Cdd:PRK04863 618 QSGEEFED--SQDVTEYMQQLLERERELTvERDELAAR----KQALD---EEIERLSQPGGSEDPRLN---ALAER 681
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
785-980 |
1.51e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 785 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQRSMQ 864
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 865 ET-------------------------VNKLHQKE-EQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEND 918
Cdd:COG3883 97 RSggsvsyldvllgsesfsdfldrlsaLSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847176 919 IAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIEDMTLKAEQSQQ 980
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
737-914 |
1.53e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 43.53 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 737 LQAKCNEQTKVIDNFTSQLKATEEKLLDLD--------ALQKASSEGKSEMEKLRQQLEAAEKQIKH--LEIEKNAESSK 806
Cdd:PRK11637 73 LLAQLKKQEEAISQASRKLRETQNTLNQLNkqidelnaSIAKLEQQQAAQERLLAAQLDAAFRQGEHtgLQLILSGEESQ 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 807 ASSitREL-------QGRELKLTNLQENLSEVSQVKDTLE----KELQILKEKFAEAS--EEAVSV-QRSMQETVNKLHQ 872
Cdd:PRK11637 153 RGE--RILayfgylnQARQETIAELKQTREELAAQKAELEekqsQQKTLLYEQQAQQQklEQARNErKKTLTGLESSLQK 230
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1622847176 873 KEEQFNMLSSDLEKLRENL--AEMEAKFR-EKDEREEQLIKAKEK 914
Cdd:PRK11637 231 DQQQLSELRANESRLRDSIarAEREAKARaEREAREAARVRDKQK 275
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1310-1677 |
1.67e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.74 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1310 LQNNRDLQLETDmllHDQEKLNASLQAALQVKQLLRSEAS---GLRAQLDDASKALRKAELETMQ--LQATNTSLTKLLE 1384
Cdd:PLN02939 59 RSSNSKLQSNTD---ENGQLENTSLRTVMELPQKSTSSDDdhnRASMQRDEAIAAIDNEQQTNSKdgEQLSDFQLEDLVG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1385 EIKarravtDSECIQLLHEKETLAASER--RLLAEKEELLSENRIITEKLhkcSEEAAHTEMSLNEKItyltsEKEMASQ 1462
Cdd:PLN02939 136 MIQ------NAEKNILLLNQARLQALEDleKILTEKEALQGKINILEMRL---SETDARIKLAAQEKI-----HVEILEE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1463 KMTKLKKHqdslLKEKSALETQNGVLLAERENSIKaigdlkrqcdqesanrriivQENMKLLGNIDALKKELQERKNENQ 1542
Cdd:PLN02939 202 QLEKLRNE----LLIRGATEGLCVHSLSKELDVLK--------------------EENMLLKDDIQFLKAELIEVAETEE 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1543 ELVAskcdlslmlkeaqnakknLEKEHTHILQAKENLDAELNTccSEKNILLRDSlnLQEECqkLSEEIQEMQqsLILEQ 1622
Cdd:PLN02939 258 RVFK------------------LEKERSLLDASLRELESKFIV--AQEDVSKLSP--LQYDC--WWEKVENLQ--DLLDR 311
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622847176 1623 EARAKEKESSLYENNQ-LHGRMVLLEQEVEELRVctEELQSEKFVLLQEKTKSEQE 1677
Cdd:PLN02939 312 ATNQVEKAALVLDQNQdLRDKVDKLEASLKEANV--SKFSSYKVELLQQKLKLLEE 365
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
837-954 |
1.80e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 837 TLEKELQILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDER----EEQLIKAK 912
Cdd:COG2433 377 SIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEAR 454
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1622847176 913 EKLENDI---AEIMKMSGDNsSQLTKmndELRLKERYVEELQLKL 954
Cdd:COG2433 455 SEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1667-2099 |
1.81e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.49 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1667 LLQEKTKSEQEVAEIIEEKElltaeAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLnhevTLAEKAQVMQ 1746
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKE-----EKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADE----VLEEHEERRE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1747 DNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELEtlqs 1826
Cdd:PRK02224 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELR---- 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1827 ftaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnnlknveELNKSKELLTVENQKMEEFRKEIETL 1906
Cdd:PRK02224 328 ----DRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELES-------ELEEAREAVEDRREEIEELEEEIEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1907 KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQ-KLEEERSVL--NNQLLEMKKSLPSNTLRESKFIKDADEEKasl 1983
Cdd:PRK02224 397 RERFGDAPVDLGNAEDFLEELREERDELREREAELEaTLRTARERVeeAEALLEAGKCPECGQPVEGSPHVETIEED--- 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1984 qksisitSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQ---LKENKRQLSSS---S 2057
Cdd:PRK02224 474 -------RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERretIEEKRERAEELrerA 546
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1622847176 2058 GNTDTQADE-DERAQESQQMIDFLNSVIVDLQRKNQDLKMKVE 2099
Cdd:PRK02224 547 AELEAEAEEkREAAAEAEEEAEEAREEVAELNSKLAELKERIE 589
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
354-965 |
1.97e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.42 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 354 QEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALardghDQHVLELEakmdQLRTMVEAADREKVELLNQLEE 433
Cdd:TIGR00618 337 QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTL-----TQHIHTLQ----QQKTTLTQKLQSLCKELDILQR 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 434 EKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQ 513
Cdd:TIGR00618 408 EQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETR 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 514 EVAELRRRLESNKpagdvdmSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENES 593
Cdd:TIGR00618 488 KKAVVLARLLELQ-------EEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRAS 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 594 LKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSE 673
Cdd:TIGR00618 561 LKEQMQEIQQSFSILTQCDNR-SKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQ 639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 674 RsaHAKEMEALRAKLMKVIKEKEN-SLEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFT 752
Cdd:TIGR00618 640 E--LALKLTALHALQLTLTQERVReHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYD 717
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 753 SQLKATEEklldldALQKASSEGKSEMEKLRQQLEAAEKQIK-HLEIEKNAESSKASSITRELQgrelKLTNLQENLSEV 831
Cdd:TIGR00618 718 REFNEIEN------ASSSLGSDLAAREDALNQSLKELMHQARtVLKARTEAHFNNNEEVTAALQ----TGAELSHLAAEI 787
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 832 SQVKDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNmlsSDLEKLRENLAEMEAKFREKDEREEQLIKA 911
Cdd:TIGR00618 788 QFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFL---SRLEEKSATLGEITHQLLKYEECSKQLAQL 864
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 912 KEKLENDIAEIMKMSGDNSSQLTKMNDELRlkeRYVEELQLKLTKANENASFLQ 965
Cdd:TIGR00618 865 TQEQAKIIQLSDKLNGINQIKIQFDGDALI---KFLHEITLYANVRLANQSEGR 915
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
753-1274 |
1.98e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.56 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 753 SQLKATEEKLLD----LDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL 828
Cdd:pfam05483 99 AELKQKENKLQEnrkiIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYER 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 829 SEVSQV----KDTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDER 904
Cdd:pfam05483 179 EETRQVymdlNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKD 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 905 EEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELrlkERYVEELQLKLTKA-------NENASFLQKSIEDMTLKAEQ 977
Cdd:pfam05483 259 LTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHL---TKELEDIKMSLQRSmstqkalEEDLQIATKTICQLTEEKEA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 978 SQQEAAEKHEEEK---KELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEiLQNLRKTLLDTE---DKLKGAR 1051
Cdd:pfam05483 336 QMEELNKAKAAHSfvvTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSE-LEEMTKFKNNKEvelEELKKIL 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1052 EENSGLLQELEELRKQAD----KAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKI 1127
Cdd:pfam05483 415 AEDEKLLDEKKQFEKIAEelkgKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHC 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1128 ALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKhyeqehlnkevlavEREKLLKEINVAQEELLKINMENDSLQaskvsm 1207
Cdd:pfam05483 495 DKLLLENKELTQEASDMTLELKKHQEDIINCKK--------------QEERMLKQIENLEEKEMNLRDELESVR------ 554
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1208 qtliEELQLSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSS---YEELVKDQKAL 1274
Cdd:pfam05483 555 ----EEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKnknIEELHQENKAL 620
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
781-941 |
2.01e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 781 KLRQQLEAAEKQIKHL--EIEKNAESSKassitrelqgrELKLTNLQEnlsEVSQVKDTLEKELqilKEKFAEaseeavs 858
Cdd:PRK12704 28 IAEAKIKEAEEEAKRIleEAKKEAEAIK-----------KEALLEAKE---EIHKLRNEFEKEL---RERRNE------- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 859 vqrsMQETVNKLHQKEEQFNMLSSDLEKLRENL----AEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ-- 932
Cdd:PRK12704 84 ----LQKLEKRLLQKEENLDRKLELLEKREEELekkeKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAKEil 159
|
....*....
gi 1622847176 933 LTKMNDELR 941
Cdd:PRK12704 160 LEKVEEEAR 168
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
1526-1702 |
2.14e-03 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 42.44 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1526 NIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKnlekehthiLQAKENLDAELNTCCSEKNILLRDSLNLQEECQ 1605
Cdd:pfam09787 1 NLESAKQELADYKQKAARILQSKEKLIASLKEGSGVEG---------LDSSTALTLELEELRQERDLLREEIQKLRGQIQ 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1606 KLSEEIQEMQQSLilEQEARAKEKESSLYENNQLHGRMVLLEQEVE------ELRVCTEELQSEKFVL---LQEKTKSEQ 1676
Cdd:pfam09787 72 QLRTELQELEAQQ--QEEAESSREQLQELEEQLATERSARREAEAElerlqeELRYLEEELRRSKATLqsrIKDREAEIE 149
|
170 180
....*....|....*....|....*.
gi 1622847176 1677 EVAEIIEEKELLTAEAAQLAAHIKTL 1702
Cdd:pfam09787 150 KLRNQLTSKSQSSSSQSELENRLHQL 175
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
356-520 |
2.54e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.92 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 356 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD 421
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 422 REKVELLNQLEEEKRKVEDLQFRVEEESI-TKGDLETQTKLEH--ARIKELEQSLLFEKTKADKLQRELEDTRvatvsek 498
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARSeERREIRKDREISRldREIERLERELEEERERIEELKRKLERLK------- 499
|
170 180
....*....|....*....|...
gi 1622847176 499 sRIMELE-KDLALRVQEVAELRR 520
Cdd:COG2433 500 -ELWKLEhSGELVPVKVVEKFTK 521
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1811-1947 |
2.69e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1811 KNKLTLKIRELEtlqsFTAAQTAEDAMQIMEQMTKE-----KTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1885
Cdd:PRK12704 26 KKIAEAKIKEAE----EEAKRILEEAKKEAEAIKKEalleaKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRK 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622847176 1886 KELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL-GRSRDEVTSH--QKLEEE 1947
Cdd:PRK12704 102 LELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIsGLTAEEAKEIllEKVEEE 166
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
699-958 |
3.25e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.58 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 699 LEAIKSKLDKAEDQHLVEMEETLNKLQEAEIKVKELEVLQAKCNeqtkvidnftsqlkATEEKLLDLDALQKASSEGKSE 778
Cdd:PLN02939 130 LEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKIN--------------ILEMRLSETDARIKLAAQEKIH 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 779 MEKLRQQLeaaEKQIKHLEIEKNAESSKASSITRELQgrELKLTNLqenlsevsqvkdTLEKELQILKEKFAEaseeavs 858
Cdd:PLN02939 196 VEILEEQL---EKLRNELLIRGATEGLCVHSLSKELD--VLKEENM------------LLKDDIQFLKAELIE------- 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 859 vqrsMQETVNKLHQKEEQFNMLSSDLEklrenlaEMEAKFREKDEREEQLIKAK-----EKLEN--DIAEIMKMSGDNSS 931
Cdd:PLN02939 252 ----VAETEERVFKLEKERSLLDASLR-------ELESKFIVAQEDVSKLSPLQydcwwEKVENlqDLLDRATNQVEKAA 320
|
250 260
....*....|....*....|....*..
gi 1622847176 932 QLTKMNDELRLKeryVEELQLKLTKAN 958
Cdd:PLN02939 321 LVLDQNQDLRDK---VDKLEASLKEAN 344
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1257-1484 |
3.39e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1257 IQKLQSSYEELVKDQKALVQdiedlTAEKKSALEKLSNLDNTCIALKVERD--NALQNNRDL---QLETDMLLHDQEKLN 1331
Cdd:COG4913 227 ADALVEHFDDLERAHEALED-----AREQIELLEPIRELAERYAAARERLAelEYLRAALRLwfaQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1332 ASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETM-QLQATNTSLTKLLEEIKARRAVTDSECIQLlheKETLAAS 1410
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLeQLEREIERLERELEERERRRARLEALLAAL---GLPLPAS 378
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 1411 ERRLLAEKEELLSENRIITEKLHKCSEEAAhtemslnekityltsekeMASQKMTKLKKHQDSLLKEKSALETQ 1484
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALA------------------EAEAALRDLRRELRELEAEIASLERR 434
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1128-1818 |
3.41e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.74 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1128 ALLQGDQQKLWSVNETLNLEK-EKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQaskvs 1206
Cdd:PRK03918 139 AILESDESREKVVRQILGLDDyENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEIS----- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1207 mqtlIEELQLSKDalIAKTEKDQEERDHLADQIKKLITENFILAKDKDDI---IQKLQSSYEELVKDQKALVQDIEDLTA 1283
Cdd:PRK03918 214 ----SELPELREE--LEKLEKEVKELEELKEEIEELEKELESLEGSKRKLeekIRELEERIEELKKEIEELEEKVKELKE 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1284 EKKSALEKlsnldntcIALKVERDNALQNNRDLQLEtdmllhdqeklnaslqaalqvKQLLRSEASGLRAQLDDASKALR 1363
Cdd:PRK03918 288 LKEKAEEY--------IKLSEFYEEYLDELREIEKR---------------------LSRLEEEINGIEERIKELEEKEE 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1364 KAEletmqlqatntSLTKLLEEIKARRAVtdseciqlLHEKETLAASERRLLAEKEELLSENRIIT-EKLHKCSEEAAHT 1442
Cdd:PRK03918 339 RLE-----------ELKKKLKELEKRLEE--------LEERHELYEEAKAKKEELERLKKRLTGLTpEKLEKELEELEKA 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1443 EMSLNEKITYLTSEKEMASQKMTKLKKHQDSLLKEKSAL--------ETQNGVLLAERENSIKAI-GDLKRQCDQESANR 1513
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcgreltEEHRKELLEEYTAELKRIeKELKEIEEKERKLR 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1514 RIIVQENMKLLGN--IDALKKELQERKNENQEL-VASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDaELNTCCSEK 1590
Cdd:PRK03918 480 KELRELEKVLKKEseLIKLKELAEQLKELEEKLkKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE-KLEELKKKL 558
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1591 NILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELqSEKFVLLQE 1670
Cdd:PRK03918 559 AELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-DKAFEELAE 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1671 KTKSEQEVAEIIEEKELLTAEA--AQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNhevtLAEKAQVMQDN 1748
Cdd:PRK03918 638 TEKRLEELRKELEELEKKYSEEeyEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEE----LEEREKAKKEL 713
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1749 QNLLAEKSEMMLEKDELLKEKEMLAESYFilqKEISQLAktnSHISANLLESQNENRTLRKDKNKLTLKI 1818
Cdd:PRK03918 714 EKLEKALERVEELREKVKKYKALLKERAL---SKVGEIA---SEIFEELTEGKYSGVRVKAEENKVKLFV 777
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
778-947 |
3.73e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.38 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 778 EMEKLRQQLEAAEKQIKHLEIEKNAesskassITREL-QGRELKLTNLQENLSEvsqvkdtLEKELQILKEKFAEASEEA 856
Cdd:COG0542 405 EIDSKPEELDELERRLEQLEIEKEA-------LKKEQdEASFERLAELRDELAE-------LEEELEALKARWEAEKELI 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 857 VSVQRSMQEtvnkLHQKEEQFNMLSSDLEKLRENLAEMEAKFREK-DereeqlikakeklENDIAEIM---------KMS 926
Cdd:COG0542 471 EEIQELKEE----LEQRYGKIPELEKELAELEEELAELAPLLREEvT-------------EEDIAEVVsrwtgipvgKLL 533
|
170 180
....*....|....*....|.
gi 1622847176 927 GDNSSQLTKMNDElrLKERYV 947
Cdd:COG0542 534 EGEREKLLNLEEE--LHERVI 552
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1237-1978 |
4.22e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1237 DQIKKLITENFILAKDKDDIIQKLQSSYEELVKDQKALVQDIEDltaeKKSALEKLSNLDNTCIALKVERDNALQNNRDL 1316
Cdd:TIGR00618 176 DQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHE----RKQVLEKELKHLREALQQTQQSHAYLTQKREA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1317 QLETDMLlhdqEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELetmqlQATNTSLTKLLEEIKARRAVTDSE 1396
Cdd:TIGR00618 252 QEEQLKK----QQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAH-----IKAVTQIEQQAQRIHTELQSKMRS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1397 CIQLLHEKETLAASE------RRLLAEKEELLSENRIITEKlHKCSEEAAHTEMSLNEKITYLTSEKEMASQKMTKLKKH 1470
Cdd:TIGR00618 323 RAKLLMKRAAHVKQQssieeqRRLLQTLHSQEIHIRDAHEV-ATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1471 QDSLLKEKSALETQNGVLLAERENSIKAIGDLKRQcDQESANRRIIVQENMKLLGNIDALKKELQERKNENQELVASKCD 1550
Cdd:TIGR00618 402 LDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQ-QRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1551 LSLMLKEAQnakknleKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQSLILEQEARAkEKE 1630
Cdd:TIGR00618 481 IHLQETRKK-------AVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYH-QLT 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1631 SSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTAE--AAQLAAHIKTLKSDFAA 1708
Cdd:TIGR00618 553 SERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEqhALLRKLQPEQDLQDVRL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1709 LSKSKA-ELQELHSCLTKILDDL--QLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQ 1785
Cdd:TIGR00618 633 HLQQCSqELALKLTALHALQLTLtqERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETH 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1786 LAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEkTETLASLEDTKQTNAKLQ 1865
Cdd:TIGR00618 713 IEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAA-LQTGAELSHLAAEIQFFN 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1866 NELDTLkennlknveeLNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLE 1945
Cdd:TIGR00618 792 RLREED----------THLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQL 861
|
730 740 750
....*....|....*....|....*....|....*...
gi 1622847176 1946 EERSVLNNQLLEMKKSLP-----SNTLRESKFIKDADE 1978
Cdd:TIGR00618 862 AQLTQEQAKIIQLSDKLNginqiKIQFDGDALIKFLHE 899
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
643-952 |
4.22e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.15 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 643 AEFAELKTQIEKMRLdyqhEIENLQNQQDSERsahaKEMEALRAKLMKVIKEKENSLEAIKSKLDKAED----------- 711
Cdd:pfam06160 107 EELDELLESEEKNRE----EVEELKDKYRELR----KTLLANRFSYGPAIDELEKQLAEIEEEFSQFEEltesgdylear 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 712 QHLVEMEETLNKLQEAEIKVKEL-EVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALQkassegksEMEKLRQQLEAAE 790
Cdd:pfam06160 179 EVLEKLEEETDALEELMEDIPPLyEELKTELPDQLEELKEGYREMEEEGYALEHLNVDK--------EIQQLEEQLEENL 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 791 KQIKHLEIEKNAESSKA---------SSITRELQGR---ELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVS 858
Cdd:pfam06160 251 ALLENLELDEAEEALEEieeridqlyDLLEKEVDAKkyvEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELER 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 859 VQrsmqetvnklhQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSS------- 931
Cdd:pfam06160 331 VR-----------GLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSLRKdeleare 399
|
330 340
....*....|....*....|.
gi 1622847176 932 QLTKMNDELRLKERYVEELQL 952
Cdd:pfam06160 400 KLDEFKLELREIKRLVEKSNL 420
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1383-2128 |
4.25e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.34 E-value: 4.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1383 LEEIKARRAVTDSECIQLLHEKETLAASERRLLaEKEELLSENRIITEKLHKCSEEAAHtEMSLNEKITYLTSEKEMA-- 1460
Cdd:TIGR00606 247 LDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKK-QMEKDNSELELKMEKVFQGTDEQLN-DLYHNHQRTVREKERELVdc 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1461 SQKMTKLKKHQDSLLKEKSALETQNGVLlaerensikaigDLKRQCDQESANRRIIVQENMKLLGNIDALKKE-LQERKN 1539
Cdd:TIGR00606 325 QRELEKLNKERRLLNQEKTELLVEQGRL------------QLQADRHQEHIRARDSLIQSLATRLELDGFERGpFSERQI 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1540 ENqelvASKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLDAELNTCCSEKNILLRDSLNLQEECQKLSEEIQEMQQS-- 1617
Cdd:TIGR00606 393 KN----FHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLeg 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1618 -----LILEQEARAKEKESSLYENNQLhgrmvlleqeVEELRVCTEELQSEKFVLLQEKTKSEQEVAEIIEEKELLTaea 1692
Cdd:TIGR00606 469 ssdriLELDQELRKAERELSKAEKNSL----------TETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRT--- 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1693 aqlaahiktlksDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEML 1772
Cdd:TIGR00606 536 ------------QMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1773 AESYFILQKEISQLAKTNSHISANLLE---SQNENRTLRKDKNKLTLKIRELETLQSFTAAQTaedamQIMEQMTKEKTE 1849
Cdd:TIGR00606 604 EQNKNHINNELESKEEQLSSYEDKLFDvcgSQDEESDLERLKEEIEKSSKQRAMLAGATAVYS-----QFITQLTDENQS 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1850 TLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAE 1929
Cdd:TIGR00606 679 CCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNR 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1930 ELGRSRDEVTSHQKL-------EEERSVLNNQLLEMKKSLPSNTLRESKFIKDADEEKAS-LQKSISITSALLTEKDAEL 2001
Cdd:TIGR00606 759 DIQRLKNDIEEQETLlgtimpeEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSdLDRTVQQVNQEKQEKQHEL 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 2002 EKLRNEVTVLRG----ENASAKSLHSVVQTLESDKVKLELKVKNLElQLKENKRQLSS--SSGNTDTQADEDERAQESQQ 2075
Cdd:TIGR00606 839 DTVVSKIELNRKliqdQQEQIQHLKSKTNELKSEKLQIGTNLQRRQ-QFEEQLVELSTevQSLIREIKDAKEQDSPLETF 917
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 2076 MIDFLNSVIVDLQRKNQDLK---MKVEMMSEAALN--GNGDDLNNYDSDDQEKQSKKK 2128
Cdd:TIGR00606 918 LEKDQQEKEELISSKETSNKkaqDKVNDIKEKVKNihGYMKDIENKIQDGKDDYLKQK 975
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1863-2075 |
4.25e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.23 E-value: 4.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1863 KLQNELDTLKEN-NLKNVEELNKSKELLTVENQKME-EFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS 1940
Cdd:COG1196 217 ELKEELKELEAElLLLKLRELEAELEELEAELEELEaELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1941 HQKLEEERSV-------LNNQLLEMKKSLPSNTLRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRG 2013
Cdd:COG1196 297 LARLEQDIARleerrreLEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847176 2014 ENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQ 2075
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
759-1042 |
4.28e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.21 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 759 EEKLLDLDALQKAssegKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElQGRELKLTNLQENLSEVSQvkdtl 838
Cdd:PRK11281 66 EQTLALLDKIDRQ----KEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE-TLSTLSLRQLESRLAQTLD----- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 839 ekELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREEQLIKAKEKLEnd 918
Cdd:PRK11281 136 --QLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQ-- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 919 iaeimKMSGDNSSQLTkmndELRLKERyvEELQLKLTKANENASFLQKSIEDMTLkaEQSQQEAAEKHEEEKKELERKLS 998
Cdd:PRK11281 212 -----RKSLEGNTQLQ----DLLQKQR--DYLTARIQRLEHQLQLLQEAINSKRL--TLSEKTVQEAQSQDEAARIQANP 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1622847176 999 DLEKKMETSHNQCQELKAGYEKATSETKtkheeilQNLR-KTLLD 1042
Cdd:PRK11281 279 LVAQELEINLQLSQRLLKATEKLNTLTQ-------QNLRvKNWLD 316
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
756-969 |
4.73e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 756 KATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVK 835
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 836 DTLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDEREeqLIKAKEKL 915
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1622847176 916 ENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKLTKANENASFLQKSIE 969
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDAL 242
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
375-580 |
5.12e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 375 RAEVAKATSHVGEIEQELALARDGHDQHvlelEAKMDQLRTMV-----EAADREKVELLNQLEEEKRKVEDLQFRVEEES 449
Cdd:PRK04863 448 QAKEQEATEELLSLEQKLSVAQAAHSQF----EQAYQLVRKIAgevsrSEAWDVARELLRRLREQRHLAEQLQQLRMRLS 523
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 450 ITKGDLETQTKLEHARiKELEQSLLFEKTKADKLQRELED--TRVATVSE-KSRIMELEKDLALRVQEVAELRRRLESNK 526
Cdd:PRK04863 524 ELEQRLRQQQRAERLL-AEFCKRLGKNLDDEDELEQLQEEleARLESLSEsVSEARERRMALRQQLEQLQARIQRLAARA 602
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622847176 527 PAG-DVDMSLSLLQEISS------------LQEKLEvtrtdHQREITSLKEHFGAREETHQKEIKAL 580
Cdd:PRK04863 603 PAWlAAQDALARLREQSGeefedsqdvteyMQQLLE-----RERELTVERDELAARKQALDEEIERL 664
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
512-890 |
5.20e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.35 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 512 VQEVAELRRRLESNKP--AGDVDMSLSLLQEI---SSLQE---KLEVTRTDHQ-----REITSLKEHFGAREETHQKeik 578
Cdd:TIGR01612 1364 IDEVKEYTKEIEENNKniKDELDKSEKLIKKIkddINLEEcksKIESTLDDKDideciKKIKELKNHILSEESNIDT--- 1440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 579 alYTATEKLSKENESLKSK-LEHANKENSDVIalwKSKLETAIASHQQAMEELKVSFSKGLGTETaEFAELKTQIEKMRL 657
Cdd:TIGR01612 1441 --YFKNADENNENVLLLFKnIEMADNKSQHIL---KIKKDNATNDHDFNINELKEHIDKSKGCKD-EADKNAKAIEKNKE 1514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 658 DYQheienlQNQQDSERSAHAKEMEALRAKLMKVIKEKENSLEAIKskldKAEDQHLVEMEETLNKLQEAEIKVKELEVL 737
Cdd:TIGR01612 1515 LFE------QYKKDVTELLNKYSALAIKNKFAKTKKDSEIIIKEIK----DAHKKFILEAEKSEQKIKEIKKEKFRIEDD 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 738 QAKCNEQTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKA-----SSITR 812
Cdd:TIGR01612 1585 AAKNDKSNKAAIDIQLSLENFENKFLKISDIKKKINDCLKETESIEKKISSFSIDSQDTELKENGDNLNSlqeflESLKD 1664
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 813 ELQGRELKLTNLQENLSEVSQVKDTLEKE--------LQILKEKFAEASEEAVSVQRSMQETVNKLhqkEEQFNmlSSDL 884
Cdd:TIGR01612 1665 QKKNIEDKKKELDELDSEIEKIEIDVDQHkknyeigiIEKIKEIAIANKEEIESIKELIEPTIENL---ISSFN--TNDL 1739
|
....*.
gi 1622847176 885 EKLREN 890
Cdd:TIGR01612 1740 EGIDPN 1745
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
587-841 |
5.49e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 587 LSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELKvsfsKGLGTETAEFAELKTQIEKMRLDYQHEIENL 666
Cdd:PHA02562 165 LSEMDKLNKDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQR----KKNGENIARKQNKYDELVEEAKTIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 667 QNqqdsERSAHAKEMEALRAKLMKVikekENSLEAIKSKLDK-AEDQHLVE-----------MEETLNKLQEAEIKVKEL 734
Cdd:PHA02562 240 TD----ELLNLVMDIEDPSAALNKL----NTAAAKIKSKIEQfQKVIKMYEkggvcptctqqISEGPDRITKIKDKLKEL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 735 evlqakcneqTKVIDNFTSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEieknAESSKASSitrEL 814
Cdd:PHA02562 312 ----------QHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVK----AAIEELQA---EF 374
|
250 260
....*....|....*....|....*..
gi 1622847176 815 QGRELKLTNLQENLSEVSQVKDTLEKE 841
Cdd:PHA02562 375 VDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
638-853 |
5.79e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 5.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 638 LGTETAEFAELKTQIEKMRLDYQHEIENLQ---NQQDSERSAHAKEMEALRAKLMKV---IKEKENSLEAIKSKLDKAED 711
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEkelAALKKEEKALLKQLAALERRIAALarrIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 712 QhLVEMEETLNKLQEAeikVKELEVLQAKCNEQTKV------------------IDNFTSQLKATEEKL-LDLDALQKAS 772
Cdd:COG4942 91 E-IAELRAELEAQKEE---LAELLRALYRLGRQPPLalllspedfldavrrlqyLKYLAPARREQAEELrADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 773 SEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEA 852
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
.
gi 1622847176 853 S 853
Cdd:COG4942 247 G 247
|
|
| COG4026 |
COG4026 |
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General ... |
1036-1193 |
6.13e-03 |
|
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General function prediction only];
Pssm-ID: 443204 [Multi-domain] Cd Length: 287 Bit Score: 40.87 E-value: 6.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1036 LRKTLLDTEDKLKGAREENSGLLQELEELrkqadkaksltylltsaKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGS 1115
Cdd:COG4026 133 LREELLELKEKIDEIAKEKEKLTKENEEL-----------------ESELEELREEYKKLREENSILEEEFDNIKSEYSD 195
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622847176 1116 LLSKLVELEAKIALLQGDQQKLWsvnetlnleKEKFLEEKQDAEKHYE-QEHLNKEVLAVEREKLLKEINVAQEELLKI 1193
Cdd:COG4026 196 LKSRFEELLKKRLLEVFSLEELW---------KELFPEELPEEDFIYFaTENLKPGKIIVGQGYIAAESKEDAEEWLKI 265
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1599-1936 |
6.20e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1599 NLQEECQKlseEIQEMQQSLILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSEKFVLLQEKTKSEQEV 1678
Cdd:pfam07888 34 NRLEECLQ---ERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1679 AEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQelhscltkilddlqlnhevtlAEKAQVMQDNQNLLAEKSEM 1758
Cdd:pfam07888 111 EELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERE---------------------TELERMKERAKKAGAQRKEE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1759 MLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELE-TLQSFTAAQTAEDAM 1837
Cdd:pfam07888 170 EAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEaLLEELRSLQERLNAS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1838 QIMEQMTKEKTETLASLEDTKQTN---AKLQNELDTLK--ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQ 1912
Cdd:pfam07888 250 ERKVEGLGEELSSMAAQRDRTQAElhqARLQAAQLTLQlaDASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQR 329
|
330 340
....*....|....*....|....
gi 1622847176 1913 KSQQLSALQEENVKLAEELGRSRD 1936
Cdd:pfam07888 330 LEERLQEERMEREKLEVELGREKD 353
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
752-919 |
6.61e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 41.55 E-value: 6.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 752 TSQLKATEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEV 831
Cdd:pfam05667 310 NEAPAATSSPPTKVETEEELQQQREEELEELQEQLEDLESSIQELEKEIKKLESSIKQVEEELEELKEQNEELEKQYKVK 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 832 SQVKDTL---EKELQILKEKFAEASEEAVSVQRSMQET----VNKLHQ-KEEQFNMLS------SDLEKLRENLAEMEAK 897
Cdd:pfam05667 390 KKTLDLLpdaEENIAKLQALVDASAQRLVELAGQWEKHrvplIEEYRAlKEAKSNKEDesqrklEEIKELREKIKEVAEE 469
|
170 180
....*....|....*....|..
gi 1622847176 898 FREKDEREEQLIKAKEKLENDI 919
Cdd:pfam05667 470 AKQKEELYKQLVAEYERLPKDV 491
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1194-1423 |
6.78e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1194 NMENDSLQASKVSMQTLIEELQ---------LSKDALIAKTEKDQEERDHLADQIKKLITENFILAKDKDDIIQKLQSSY 1264
Cdd:PRK05771 5 RMKKVLIVTLKSYKDEVLEALHelgvvhiedLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1265 EELVKDQKALVQDIEDltaEKKSALEKLSNLDNTCIALKVERdNALQNNRDLQLETDMLLH-----------DQEKLNAS 1333
Cdd:PRK05771 85 EELIKDVEEELEKIEK---EIKELEEEISELENEIKELEQEI-ERLEPWGNFDLDLSLLLGfkyvsvfvgtvPEDKLEEL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1334 LQAALQVKQLLRSEASG--------LRAQLDDASKALRKAELETMQLQATNTsLTKLLEEIKARRAVTDSECIQLLHEKE 1405
Cdd:PRK05771 161 KLESDVENVEYISTDKGyvyvvvvvLKELSDEVEEELKKLGFERLELEEEGT-PSELIREIKEELEEIEKERESLLEELK 239
|
250
....*....|....*...
gi 1622847176 1406 TLAASERRLLAEKEELLS 1423
Cdd:PRK05771 240 ELAKKYLEELLALYEYLE 257
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1255-1464 |
7.70e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 7.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1255 DIIQKLQSSYEELVKDQKALVQDIEDLTAEKKSALEKLSNLDNTCIALKVERDNALQNNRDLQLETDMLLHDQEKLNASL 1334
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1335 QA--ALQVKQLLRSEASGLRAQL------DDASKALRKAEL----------ETMQLQATNTSLTKLLEEIKARRAVTDSE 1396
Cdd:COG4942 100 EAqkEELAELLRALYRLGRQPPLalllspEDFLDAVRRLQYlkylaparreQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622847176 1397 CIQLLHEKETLAAserrLLAEKEELLSENRIITEKLHKCSEEAAHTEMSLNEKITYLTSEKEMASQKM 1464
Cdd:COG4942 180 LAELEEERAALEA----LKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1378-1909 |
7.94e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.59 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1378 SLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEkLHKCSEEAAHTEMSLNEKITYLTSEK 1457
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE-LEERIEELKKEIEELEEKVKELKELK 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1458 EMAsQKMTKLKKHQDSLLKEKSALETQNGVLLAERENSIKAIGDLK---------RQCDQESANRRIIVQENMKLLGNID 1528
Cdd:PRK03918 290 EKA-EEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEekeerleelKKKLKELEKRLEELEERHELYEEAK 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1529 ALKKELQERKNENQELvaSKCDLSLMLKEAQNAKKNLEKEHTHILQAKENLD---AELNTCCSE------KNILLRDSLN 1599
Cdd:PRK03918 369 AKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGELKkeiKELKKAIEElkkakgKCPVCGRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1600 LQEECQKLSEEIQEMQQslILEQEARAKEKESSLYENNQLHGRMVLLEQEVEELRVCTEELQSekfvlLQEKTKS--EQE 1677
Cdd:PRK03918 447 EEHRKELLEEYTAELKR--IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKE-----LEEKLKKynLEE 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1678 VAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQlnhevtlaekaqvmqdnqNLLAEKSE 1757
Cdd:PRK03918 520 LEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELA------------------ELLKELEE 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1758 MMLEKDELLKEKEMLAESYFilqKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSftaaqtaedam 1837
Cdd:PRK03918 582 LGFESVEELEERLKELEPFY---NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRK----------- 647
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622847176 1838 QIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1909
Cdd:PRK03918 648 ELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKA 719
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1520-1923 |
7.99e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 7.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1520 NMKLLGNIDALKKELQERKNENQELVASKCDLSLMLKEAQNAKKNLEKEHTHILQAKEN---------LDAELNTCCSEK 1590
Cdd:COG4717 69 NLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLlplyqeleaLEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1591 NIL---LRDSLNLQEECQKLSEEIQEMQQSLILEQEARAKEKESSL----YENNQLHGRMVLLEQEVEELRVCTEELQSE 1663
Cdd:COG4717 149 EELeerLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELqdlaEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1664 KFVLlqEKTKSEQEVAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQLNHEVTLAEKAQ 1743
Cdd:COG4717 229 LEQL--ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1744 VMQ-------DNQNLLAEKSEMMLEKDELLKEKEMLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTL 1816
Cdd:COG4717 307 LQAlpaleelEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1817 KIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNlKNVEELNKSKELLTVENQKM 1896
Cdd:COG4717 387 LRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELE-EELEELREELAELEAELEQL 465
|
410 420
....*....|....*....|....*..
gi 1622847176 1897 EEfRKEIETLKQAAAQKSQQLSALQEE 1923
Cdd:COG4717 466 EE-DGELAELLQELEELKAELRELAEE 491
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
337-976 |
8.31e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 8.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 337 TETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIE-QELALARDGHDQHVLELEaKMD 411
Cdd:pfam12128 272 TLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGElsaaDAAVAKDRSELEALEdQHGAFLDADIETAAADQE-QLP 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 412 QLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITK--GDLETQTKLEHARIKELEQsllfEKTKADKLQRELED 489
Cdd:pfam12128 351 SWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDiaGIKDKLAKIREARDRQLAV----AEDDLQALESELRE 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 490 TRVAtvsEKSRIMELEKDLALRVqevAELRRRLESNKPAGDVDMSLSLLQE-ISSLQEKLE---VTRTDHQREITSLKEH 565
Cdd:pfam12128 427 QLEA---GKLEFNEEEYRLKSRL---GELKLRLNQATATPELLLQLENFDErIERAREEQEaanAEVERLQSELRQARKR 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 566 FGAREETHQKEIKALYTATEKLSKENESLKSK----LEHANKEnsdvIALWKSKLETAIASHQQAMEELKVSFSKGLGTE 641
Cdd:pfam12128 501 RDQASEALRQASRRLEERQSALDELELQLFPQagtlLHFLRKE----APDWEQSIGKVISPELLHRTDLDPEVWDGSVGG 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 642 TAEFAELKTQIEKMRLDYQHEIENlqnQQDSERSAHAKEMEALRAKlmkvIKEKENSLEAIKSKLDKAEdqhlVEMEETL 721
Cdd:pfam12128 577 ELNLYGVKLDLKRIDVPEWAASEE---ELRERLDKAEEALQSAREK----QAAAEEQLVQANGELEKAS----REETFAR 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 722 NKLQEAEIKVKELevlqakcneqtkvidnftsqlkaTEEKLLDLDALQKASSEGKSEMEKLRQQLEAAEKQIKH------ 795
Cdd:pfam12128 646 TALKNARLDLRRL-----------------------FDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKkhqawl 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 796 --------------LEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKDTLEKELQILKEKFAEASEEAVSVQR 861
Cdd:pfam12128 703 eeqkeqkreartekQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLER 782
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 862 SMQETVNKLHQKEEQFNMLSSDLEKLRENLAEMEAKFREKDER-EEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDEL 940
Cdd:pfam12128 783 KIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISElQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENL 862
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1622847176 941 ---RLKERYVEELQLKLT--KANENASFLQKSIEDMTLKAE 976
Cdd:pfam12128 863 rglRCEMSKLATLKEDANseQAQGSIGERLAQLEDLKLKRD 903
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
884-1390 |
9.72e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 9.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 884 LEKLRENLAEMEakfrEKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERYVEELQLKltkanenasf 963
Cdd:COG4717 73 LKELEEELKEAE----EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALE---------- 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 964 lqksiedMTLKAEQSQQEAAEKHEEEKKELERKLSDLEKKMETSHNQCQELKAGYEKATSETKTKHEEILQNLRKTLLDT 1043
Cdd:COG4717 139 -------AELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAEL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1044 EDKLKGAREENSGLLQELEELRKQAdkaksltylltSAKKEIELMSEELRGLKSEKQLLSQEGNDlklenGSLLSKLVEL 1123
Cdd:COG4717 212 EEELEEAQEELEELEEELEQLENEL-----------EAAALEERLKEARLLLLIAAALLALLGLG-----GSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1124 EAKIALLQGdqqKLWSVNETLNLEKEKFLEEKQDAEKHYEQEHLNKEVLAVEREKLLKEINVAQEELLKINMENDSLQAS 1203
Cdd:COG4717 276 AGVLFLVLG---LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1204 KVSMQTLIEELQLskdaliaktekdqeerDHLADQIKKLITENFilAKDKDDIIQKLQsSYEELVKDQKALVQDIEDLTA 1283
Cdd:COG4717 353 LREAEELEEELQL----------------EELEQEIAALLAEAG--VEDEEELRAALE-QAEEYQELKEELEELEEQLEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622847176 1284 EKKSALEKLSNLDNTciALKVERDNALQNNRDLQLETDMLLHDQEKLNASLQAALQVKQLlrseaSGLRAQLDDASKALR 1363
Cdd:COG4717 414 LLGELEELLEALDEE--ELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGEL-----AELLQELEELKAELR 486
|
490 500
....*....|....*....|....*..
gi 1622847176 1364 KAELETMQLQATNTSLTKLLEEIKARR 1390
Cdd:COG4717 487 ELAEEWAALKLALELLEEAREEYREER 513
|
|
| |
