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Conserved domains on  [gi|1622830405|ref|XP_028685184|]
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ADAMTS-like protein 4 isoform X3 [Macaca mulatta]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ADAMTS_spacer1 pfam05986
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like ...
 488-601 8.57e-30

ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organization among its members. Members of the ADAM-TS family have been implicated in a range of diseases. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles. Examples of ADAM-TS-like proteins are papilin and punctin.


:

Pssm-ID: 461796  Cd Length: 115  Bit Score: 114.21  E-value: 8.57e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 488 LVSGNLTdRGGPLGYQKILWIPAGASRLQIAQLRPSSNYLALRGPGGRSIINGNWAVDP-PGSYRAGGTVFRYNRPPREe 566
Cdd:pfam05986   1 TVSGSFT-EGRAKGYVTFVTIPAGATHIHIVNRKPSFTHLAVKNVQGKYILNGKGSISLnPTYPSLLGTVLEYRRSLPA- 78

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1622830405 567 gkGESLSAEGPTTQPVDVYMIFQEE---NPGVFYQYVI 601
Cdd:pfam05986  79 --LEELHAPGPTQEDLEIQVLRQYGkgtNPGITYEYFI 114
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 729-785 4.63e-17

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


:

Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 75.57  E-value: 4.63e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405 729 WEAGEWTSCSRSCGPGTQHRQLQCRQEfgGGGSSVPPERCGHLPRPNITQSCQLRLC 785
Cdd:pfam19030   1 WVAGPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDSECSAQKKPPETQSCNLKPC 55
ADAMTS_CR_3 super family cl41950
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ...
 392-486 5.71e-11

ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ADAMTS-like endopeptidases widely spread in animals. It is a well-conserved cysteine-rich sequence containing 10 cysteine residues. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase, pfam08516) and consists of at least 20 members sharing a high degree of sequence similarity and conserved domain organization. Members of the ADAMTS family have been implicated in a range of diseases.


The actual alignment was detected with superfamily member pfam19236:

Pssm-ID: 437068  Cd Length: 115  Bit Score: 60.49  E-value: 5.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 392 QCAAFNSQEFM-----GQLYQW-EPFTEVQGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGAP------DICVAGRCL 459
Cdd:pfam19236   9 QCARTDGQPLRsspggASFYHWgAAVPHSQGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPredgtlSLCVLGSCR 88

                          90       100
                  ....*....|....*....|....*..
gi 1622830405 460 SPGCDGILGSGRRPDGCGVCGGDDSTC 486
Cdd:pfam19236  89 TFGCDGRMDSQQVWDRCQVCGGDNSTC 115
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 788-843 2.88e-10

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


:

Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 56.31  E-value: 2.88e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405 788 WEVGsPWSQCSVRCGRGQRSRQVRCVG-NNGDEVSEQECaSGPPQPPSREACDMGPC 843
Cdd:pfam19030   1 WVAG-PWGECSVTCGGGVQTRLVQCVQkGGGSIVPDSEC-SAQKKPPETQSCNLKPC 55
dnaA super family cl42516
chromosomal replication initiator protein DnaA;
189-389 8.94e-06

chromosomal replication initiator protein DnaA;


The actual alignment was detected with superfamily member PRK14086:

Pssm-ID: 455861 [Multi-domain]  Cd Length: 617  Bit Score: 49.44  E-value: 8.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 189 SSRGEEPIPSPTPRAEPfstngSPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTeaPSPT 268
Cdd:PRK14086   90 PSAGEPAPPPPHARRTS-----EPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAW--PRAA 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 269 HSLGEgGFFRASPQPRRPssqgWASPQVAGRRPDPF-PSVPRGRGQQGQgPWGMGGTPHGHRLEPDPQHPD-GWLPLLSN 346
Cdd:PRK14086  163 DDYGW-QQQRLGFPPRAP----YASPASYAPEQERDrEPYDAGRPEYDQ-RRRDYDHPRPDWDRPRRDRTDrPEPPPGAG 236

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1622830405 347 GPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCP-PEQPDPR 389
Cdd:PRK14086  237 HVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPgPGEPTAR 280
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 49-79 1.44e-05

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 42.96  E-value: 1.44e-05
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1622830405   49 WGPWVQWASCSQPCGVGVQRRSRTCQLPTVQ 79
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ 31
TSP1_ADAMTS super family cl40597
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 676-725 3.12e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


The actual alignment was detected with superfamily member pfam19030:

Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 39.36  E-value: 3.12e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1622830405 676 SACSASCGKGVWRPIFLCISRESGEELDERSCAAGARPPASpEPCHGAPC 725
Cdd:pfam19030   7 GECSVTCGGGVQTRLVQCVQKGGGSIVPDSECSAQKKPPET-QSCNLKPC 55
 
Name Accession Description Interval E-value
ADAMTS_spacer1 pfam05986
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like ...
 488-601 8.57e-30

ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organization among its members. Members of the ADAM-TS family have been implicated in a range of diseases. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles. Examples of ADAM-TS-like proteins are papilin and punctin.


Pssm-ID: 461796  Cd Length: 115  Bit Score: 114.21  E-value: 8.57e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 488 LVSGNLTdRGGPLGYQKILWIPAGASRLQIAQLRPSSNYLALRGPGGRSIINGNWAVDP-PGSYRAGGTVFRYNRPPREe 566
Cdd:pfam05986   1 TVSGSFT-EGRAKGYVTFVTIPAGATHIHIVNRKPSFTHLAVKNVQGKYILNGKGSISLnPTYPSLLGTVLEYRRSLPA- 78

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1622830405 567 gkGESLSAEGPTTQPVDVYMIFQEE---NPGVFYQYVI 601
Cdd:pfam05986  79 --LEELHAPGPTQEDLEIQVLRQYGkgtNPGITYEYFI 114
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 729-785 4.63e-17

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 75.57  E-value: 4.63e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405 729 WEAGEWTSCSRSCGPGTQHRQLQCRQEfgGGGSSVPPERCGHLPRPNITQSCQLRLC 785
Cdd:pfam19030   1 WVAGPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDSECSAQKKPPETQSCNLKPC 55
ADAMTS_CR_3 pfam19236
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ...
 392-486 5.71e-11

ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ADAMTS-like endopeptidases widely spread in animals. It is a well-conserved cysteine-rich sequence containing 10 cysteine residues. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase, pfam08516) and consists of at least 20 members sharing a high degree of sequence similarity and conserved domain organization. Members of the ADAMTS family have been implicated in a range of diseases.


Pssm-ID: 437068  Cd Length: 115  Bit Score: 60.49  E-value: 5.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 392 QCAAFNSQEFM-----GQLYQW-EPFTEVQGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGAP------DICVAGRCL 459
Cdd:pfam19236   9 QCARTDGQPLRsspggASFYHWgAAVPHSQGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPredgtlSLCVLGSCR 88

                          90       100
                  ....*....|....*....|....*..
gi 1622830405 460 SPGCDGILGSGRRPDGCGVCGGDDSTC 486
Cdd:pfam19236  89 TFGCDGRMDSQQVWDRCQVCGGDNSTC 115
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 788-843 2.88e-10

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 56.31  E-value: 2.88e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405 788 WEVGsPWSQCSVRCGRGQRSRQVRCVG-NNGDEVSEQECaSGPPQPPSREACDMGPC 843
Cdd:pfam19030   1 WVAG-PWGECSVTCGGGVQTRLVQCVQkGGGSIVPDSEC-SAQKKPPETQSCNLKPC 55
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 788-843 3.15e-06

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 44.89  E-value: 3.15e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622830405  788 WEVGSPWSQCSVRCGRGQRSRQVRCVGNNGDeVSEQECasgPPQPPSREACDMGPC 843
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ-NGGGPC---TGEDVETRACNEQPC 52
dnaA PRK14086
chromosomal replication initiator protein DnaA;
189-389 8.94e-06

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 49.44  E-value: 8.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 189 SSRGEEPIPSPTPRAEPfstngSPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTeaPSPT 268
Cdd:PRK14086   90 PSAGEPAPPPPHARRTS-----EPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAW--PRAA 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 269 HSLGEgGFFRASPQPRRPssqgWASPQVAGRRPDPF-PSVPRGRGQQGQgPWGMGGTPHGHRLEPDPQHPD-GWLPLLSN 346
Cdd:PRK14086  163 DDYGW-QQQRLGFPPRAP----YASPASYAPEQERDrEPYDAGRPEYDQ-RRRDYDHPRPDWDRPRRDRTDrPEPPPGAG 236

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1622830405 347 GPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCP-PEQPDPR 389
Cdd:PRK14086  237 HVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPgPGEPTAR 280
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 49-79 1.44e-05

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 42.96  E-value: 1.44e-05
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1622830405   49 WGPWVQWASCSQPCGVGVQRRSRTCQLPTVQ 79
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ 31
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 676-725 3.12e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 39.36  E-value: 3.12e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1622830405 676 SACSASCGKGVWRPIFLCISRESGEELDERSCAAGARPPASpEPCHGAPC 725
Cdd:pfam19030   7 GECSVTCGGGVQTRLVQCVQKGGGSIVPDSECSAQKKPPET-QSCNLKPC 55
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 729-785 8.30e-04

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 38.34  E-value: 8.30e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405  729 WEAGEWTSCSRSCGPGTQHRQLQCRqefgGGGSSVPPERCGHLPRpnITQSCQLRLC 785
Cdd:smart00209   2 SEWSEWSPCSVTCGGGVQTRTRSCC----SPPPQNGGGPCTGEDV--ETRACNEQPC 52
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 195-318 1.07e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 42.72  E-value: 1.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 195 PIPSPTPRAEPFSTNG-SPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTEAPS----PTH 269
Cdd:pfam09770 222 PAAPPAQQAQQQQQFPpQIQQQQQPQQQPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPPPvpvqPTQ 301

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1622830405 270 SLgeggffrasPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQGQGP 318
Cdd:pfam09770 302 IL---------QNPNRLSAARVGYPQNPQPGVQPAPAHQAHRQQGSFGR 341
TSP_1 pfam00090
Thrombospondin type 1 domain;
50-76 2.33e-03

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 36.63  E-value: 2.33e-03
                          10        20
                  ....*....|....*....|....*..
gi 1622830405  50 GPWVQWASCSQPCGVGVQRRSRTCQLP 76
Cdd:pfam00090   1 SPWSPWSPCSVTCGKGIQVRQRTCKSP 27
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 785-832 2.47e-03

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 41.49  E-value: 2.47e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1622830405 785 CGHWEvgsPWSQCSVRCGRGQRSRQ-----VRCVGNNGDEVSEQECasgPPQP 832
Cdd:PTZ00441  240 CGPWD---EWTPCSVTCGKGTHSRSrpilhEGCTTHMVEECEEEEC---PVEP 286
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 193-389 5.43e-03

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 40.52  E-value: 5.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 193 EEPIPSPTPRAEPFSTNGSPKTELPPTEL--SVHTPSPQAEPlSPETAQTEVAPRTRPAPPQHHPRAqaadtEAPSPths 270
Cdd:NF033839  293 SAPKPGMQPSPQPEKKEVKPEPETPKPEVkpQLEKPKPEVKP-QPEKPKPEVKPQLETPKPEVKPQP-----EKPKP--- 363

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 271 lgeggffRASPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRgqqgqgpwgMGGTPHGHRLEPDPQhPDGWLPLLSNGPHA 350
Cdd:NF033839  364 -------EVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE---------VKPQPEKPKPEVKPQ-PEKPKPEVKPQPEK 426

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1622830405 351 SSLWSLFAPSSPIPRCSGESEQLRacSQAPCPPEQPDPR 389
Cdd:NF033839  427 PKPEVKPQPEKPKPEVKPQPEKPK--PEVKPQPETPKPE 463
 
Name Accession Description Interval E-value
ADAMTS_spacer1 pfam05986
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like ...
 488-601 8.57e-30

ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organization among its members. Members of the ADAM-TS family have been implicated in a range of diseases. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles. Examples of ADAM-TS-like proteins are papilin and punctin.


Pssm-ID: 461796  Cd Length: 115  Bit Score: 114.21  E-value: 8.57e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 488 LVSGNLTdRGGPLGYQKILWIPAGASRLQIAQLRPSSNYLALRGPGGRSIINGNWAVDP-PGSYRAGGTVFRYNRPPREe 566
Cdd:pfam05986   1 TVSGSFT-EGRAKGYVTFVTIPAGATHIHIVNRKPSFTHLAVKNVQGKYILNGKGSISLnPTYPSLLGTVLEYRRSLPA- 78

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1622830405 567 gkGESLSAEGPTTQPVDVYMIFQEE---NPGVFYQYVI 601
Cdd:pfam05986  79 --LEELHAPGPTQEDLEIQVLRQYGkgtNPGITYEYFI 114
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 729-785 4.63e-17

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 75.57  E-value: 4.63e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405 729 WEAGEWTSCSRSCGPGTQHRQLQCRQEfgGGGSSVPPERCGHLPRPNITQSCQLRLC 785
Cdd:pfam19030   1 WVAGPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDSECSAQKKPPETQSCNLKPC 55
ADAMTS_CR_3 pfam19236
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ...
 392-486 5.71e-11

ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ADAMTS-like endopeptidases widely spread in animals. It is a well-conserved cysteine-rich sequence containing 10 cysteine residues. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase, pfam08516) and consists of at least 20 members sharing a high degree of sequence similarity and conserved domain organization. Members of the ADAMTS family have been implicated in a range of diseases.


Pssm-ID: 437068  Cd Length: 115  Bit Score: 60.49  E-value: 5.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 392 QCAAFNSQEFM-----GQLYQW-EPFTEVQGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGAP------DICVAGRCL 459
Cdd:pfam19236   9 QCARTDGQPLRsspggASFYHWgAAVPHSQGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPredgtlSLCVLGSCR 88

                          90       100
                  ....*....|....*....|....*..
gi 1622830405 460 SPGCDGILGSGRRPDGCGVCGGDDSTC 486
Cdd:pfam19236  89 TFGCDGRMDSQQVWDRCQVCGGDNSTC 115
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 788-843 2.88e-10

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 56.31  E-value: 2.88e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405 788 WEVGsPWSQCSVRCGRGQRSRQVRCVG-NNGDEVSEQECaSGPPQPPSREACDMGPC 843
Cdd:pfam19030   1 WVAG-PWGECSVTCGGGVQTRLVQCVQkGGGSIVPDSEC-SAQKKPPETQSCNLKPC 55
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 788-843 3.15e-06

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 44.89  E-value: 3.15e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622830405  788 WEVGSPWSQCSVRCGRGQRSRQVRCVGNNGDeVSEQECasgPPQPPSREACDMGPC 843
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ-NGGGPC---TGEDVETRACNEQPC 52
dnaA PRK14086
chromosomal replication initiator protein DnaA;
189-389 8.94e-06

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 49.44  E-value: 8.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 189 SSRGEEPIPSPTPRAEPfstngSPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTeaPSPT 268
Cdd:PRK14086   90 PSAGEPAPPPPHARRTS-----EPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAW--PRAA 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 269 HSLGEgGFFRASPQPRRPssqgWASPQVAGRRPDPF-PSVPRGRGQQGQgPWGMGGTPHGHRLEPDPQHPD-GWLPLLSN 346
Cdd:PRK14086  163 DDYGW-QQQRLGFPPRAP----YASPASYAPEQERDrEPYDAGRPEYDQ-RRRDYDHPRPDWDRPRRDRTDrPEPPPGAG 236

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1622830405 347 GPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCP-PEQPDPR 389
Cdd:PRK14086  237 HVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPgPGEPTAR 280
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 49-79 1.44e-05

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 42.96  E-value: 1.44e-05
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1622830405   49 WGPWVQWASCSQPCGVGVQRRSRTCQLPTVQ 79
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ 31
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 191-305 1.60e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.48  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 191 RGEEPIPSPTPRAEPfSTNGSPKTeLPPTELSVHTPSPQAEPLSPETAQTEVAPrtrPAPPQHHPRAQAADTEAPSPTHS 270
Cdd:PRK14951  383 RPEAAAPAAAPVAQA-AAAPAPAA-APAAAASAPAAPPAAAPPAPVAAPAAAAP---AAAPAAAPAAVALAPAPPAQAAP 457

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1622830405 271 LGEGGFFRASPQPRRPSSQGWASPQVAGRRPDPFP 305
Cdd:PRK14951  458 ETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 199-389 1.64e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.36  E-value: 1.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 199 PTPRAEPFSTNGSPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTEAPSPTHSLGEGGFFR 278
Cdd:PRK07764  598 EGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAA 677

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 279 ASPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQGQGPWGmGGTPHGHRLEPDPQHPDGWLPLLSNGPHASSLWSLFA 358
Cdd:PRK07764  678 PAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAA-QPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPA 756

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1622830405 359 PSSPIPRCSGESEQLRACSQAPCPPEQPDPR 389
Cdd:PRK07764  757 QPPPPPAPAPAAAPAAAPPPSPPSEEEEMAE 787
PHA03247 PHA03247
large tegument protein UL36; Provisional
 96-388 2.02e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 2.02e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405   96 ALLPRGQGPRPqtsPETLPLYRTQSRGRGGPLRGPASHLGREETQEIQAARRSRLRDPIKPgmfgygrvpfALPLHRNRR 175
Cdd:PHA03247  2616 PLPPDTHAPDP---PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRA----------AQASSPPQR 2682

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405  176 HPRRPPRSELSLISSRGEEPIPSPTPraEPFSTNGSPKTELPPTELSVHTPSPQ-----AEPLSPETAQTEVAPRTRPAP 250
Cdd:PHA03247  2683 PRRRAARPTVGSLTSLADPPPPPPTP--EPAPHALVSATPLPPGPAAARQASPAlpaapAPPAVPAGPATPGGPARPARP 2760

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405  251 PQ----HHPRAQAADTEAPSPTHSLGEGgffrASPQPRRPSSQG-WASPQVAGRRPDPFPSVPRGRGQQGQGPWGMGGTP 325
Cdd:PHA03247  2761 PTtagpPAPAPPAAPAAGPPRRLTRPAV----ASLSESRESLPSpWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP 2836

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622830405  326 HGHRLEPDPQHP----DGWL----PLLSNGPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCPPEQPDP 388
Cdd:PHA03247  2837 TAPPPPPGPPPPslplGGSVapggDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER 2907
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 676-725 3.12e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 39.36  E-value: 3.12e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1622830405 676 SACSASCGKGVWRPIFLCISRESGEELDERSCAAGARPPASpEPCHGAPC 725
Cdd:pfam19030   7 GECSVTCGGGVQTRLVQCVQKGGGSIVPDSECSAQKKPPET-QSCNLKPC 55
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 190-339 4.02e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 4.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 190 SRGEEPIPSPTPRAEPFSTNGSPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTEAPSPTH 269
Cdd:PRK07764  610 EEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAA 689

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 270 SLGEGGFFRASPQPRRPssQGWASPQVAGRRPDPfPSVPRGRGQQGQGPWGMGGTPHGHRLEPDPQHPDG 339
Cdd:PRK07764  690 PAAPAGAAPAQPAPAPA--ATPPAGQADDPAAQP-PQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPA 756
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 729-785 8.30e-04

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 38.34  E-value: 8.30e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622830405  729 WEAGEWTSCSRSCGPGTQHRQLQCRqefgGGGSSVPPERCGHLPRpnITQSCQLRLC 785
Cdd:smart00209   2 SEWSEWSPCSVTCGGGVQTRTRSCC----SPPPQNGGGPCTGEDV--ETRACNEQPC 52
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 195-318 1.07e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 42.72  E-value: 1.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 195 PIPSPTPRAEPFSTNG-SPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPPQHHPRAQAADTEAPS----PTH 269
Cdd:pfam09770 222 PAAPPAQQAQQQQQFPpQIQQQQQPQQQPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPPPvpvqPTQ 301

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1622830405 270 SLgeggffrasPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQGQGP 318
Cdd:pfam09770 302 IL---------QNPNRLSAARVGYPQNPQPGVQPAPAHQAHRQQGSFGR 341
PHA03247 PHA03247
large tegument protein UL36; Provisional
 226-389 1.13e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.00  E-value: 1.13e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405  226 PSPQAEPLSPETAQTEVAPRTRPAPPQHHP--RAQAADTEAP----SPTHSLGEGGFFRASPQPrrpssqgwASPQVAGR 299
Cdd:PHA03247  2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPavTSRARRPDAPpqsaRPRAPVDDRGDPRGPAPP--------SPLPPDTH 2622

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405  300 RPDPFPSVPRGRGQQGQGPwGMGGTPHGHRLEPDPQHPDGWLP----LLSNGPHASSlwslfAPSSPIPRCSGES-EQLR 374
Cdd:PHA03247  2623 APDPPPPSPSPAANEPDPH-PPPTVPPPERPRDDPAPGRVSRPrrarRLGRAAQASS-----PPQRPRRRAARPTvGSLT 2696

                          170
                   ....*....|....*
gi 1622830405  375 ACSQAPCPPEQPDPR 389
Cdd:PHA03247  2697 SLADPPPPPPTPEPA 2711
TSP_1 pfam00090
Thrombospondin type 1 domain;
792-843 1.53e-03

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 37.40  E-value: 1.53e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1622830405 792 SPWSQCSVRCGRGQRSRQVRCVGNNGDEVSeqeCaSGPPQPpsREACDMGPC 843
Cdd:pfam00090   4 SPWSPCSVTCGKGIQVRQRTCKSPFPGGEP---C-TGDDIE--TQACKMDKC 49
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 189-261 1.91e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 41.72  E-value: 1.91e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622830405 189 SSRGEEPIPSPTPRAEPF-STNGSPKTELPPTELSVHTPSPQAEPLSPETAQTEVAPR-TRPAPPQHHPRAQAAD 261
Cdd:PRK14950  386 STRPKAAAAANIPPKEPVrETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKyTPPAPPKEEEKALIAD 460
TSP_1 pfam00090
Thrombospondin type 1 domain;
50-76 2.33e-03

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 36.63  E-value: 2.33e-03
                          10        20
                  ....*....|....*....|....*..
gi 1622830405  50 GPWVQWASCSQPCGVGVQRRSRTCQLP 76
Cdd:pfam00090   1 SPWSPWSPCSVTCGKGIQVRQRTCKSP 27
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 785-832 2.47e-03

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 41.49  E-value: 2.47e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1622830405 785 CGHWEvgsPWSQCSVRCGRGQRSRQ-----VRCVGNNGDEVSEQECasgPPQP 832
Cdd:PTZ00441  240 CGPWD---EWTPCSVTCGKGTHSRSrpilhEGCTTHMVEECEEEEC---PVEP 286
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 50-72 2.63e-03

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 36.87  E-value: 2.63e-03
                          10        20
                  ....*....|....*....|...
gi 1622830405  50 GPWVQWASCSQPCGVGVQRRSRT 72
Cdd:pfam19028   4 SEWSEWSECSVTCGGGVQTRTRT 26
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 193-389 5.43e-03

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 40.52  E-value: 5.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 193 EEPIPSPTPRAEPFSTNGSPKTELPPTEL--SVHTPSPQAEPlSPETAQTEVAPRTRPAPPQHHPRAqaadtEAPSPths 270
Cdd:NF033839  293 SAPKPGMQPSPQPEKKEVKPEPETPKPEVkpQLEKPKPEVKP-QPEKPKPEVKPQLETPKPEVKPQP-----EKPKP--- 363

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405 271 lgeggffRASPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRgqqgqgpwgMGGTPHGHRLEPDPQhPDGWLPLLSNGPHA 350
Cdd:NF033839  364 -------EVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE---------VKPQPEKPKPEVKPQ-PEKPKPEVKPQPEK 426

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1622830405 351 SSLWSLFAPSSPIPRCSGESEQLRacSQAPCPPEQPDPR 389
Cdd:NF033839  427 PKPEVKPQPEKPKPEVKPQPEKPK--PEVKPQPETPKPE 463
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 192-364 5.88e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 40.45  E-value: 5.88e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405  192 GEEPipsptPRAEPFSTNG---SPKTEL---PPTElSVHTPS--PQAEPLSPETAQTEVAPRTRPAPPQHhpraQAADTE 263
Cdd:PRK10263   713 GEQP-----AGANPFSLDDfefSPMKALlddGPHE-PLFTPIvePVQQPQQPVAPQQQYQQPQQPVAPQP----QYQQPQ 782

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622830405  264 APSPTHSLGEGGFFRASPQPRRPSSQGWASPQVAGRRPDPfPSVPRGRGQQGQGPwgmggtphghrLEPDPQ----HPdg 339
Cdd:PRK10263   783 QPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQ-PVAPQPQYQQPQQP-----------VAPQPQdtllHP-- 848

                          170       180
                   ....*....|....*....|....*
gi 1622830405  340 wlPLLSNGPHAsslwSLFAPSSPIP 364
Cdd:PRK10263   849 --LLMRNGDSR----PLHKPTTPLP 867
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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