|
Name |
Accession |
Description |
Interval |
E-value |
| FKBP_C |
pfam00254 |
FKBP-type peptidyl-prolyl cis-trans isomerase; |
11-96 |
8.75e-18 |
|
FKBP-type peptidyl-prolyl cis-trans isomerase;
Pssm-ID: 459735 Cd Length: 94 Bit Score: 76.85 E-value: 8.75e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 11 SVHYRAWTESTQhKFEDTWLEQRPIELVLGKEKKeMTGLSIGVSNMKSGERALLHVGWELGYGKEGNfSFPNVPPMADIL 90
Cdd:pfam00254 12 TVHYTGTLEDGT-VFDSSYDRGKPFEFTLGSGQV-IPGWDEGLVGMKVGEKRKLTIPPELAYGEEGL-AGPVIPPNATLV 88
|
....*.
gi 1585708726 91 YEVELI 96
Cdd:pfam00254 89 FEVELL 94
|
|
| FkpA |
COG0545 |
FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein ... |
2-98 |
2.22e-12 |
|
FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440311 [Multi-domain] Cd Length: 104 Bit Score: 62.12 E-value: 2.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 2 EEVQEQQNQSVHYRAWTeSTQHKFEDTWLEQRPIELVLGKEKkEMTGLSIGVSNMKSGERALLHVGWELGYGKEGNfsFP 81
Cdd:COG0545 12 AKPKAGDTVTVHYTGTL-LDGTVFDSSYDRGEPATFPLGVGQ-VIPGWDEGLQGMKVGGKRRLVIPPELAYGERGA--GG 87
|
90
....*....|....*..
gi 1585708726 82 NVPPMADILYEVELIGF 98
Cdd:COG0545 88 VIPPNSTLVFEVELLDV 104
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
126-237 |
1.84e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 61.55 E-value: 1.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFqlfgkyrdmalavknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG3914 119 GNLLLALGRLEEALAALRRALALNPDFAEA-----------------YLNLGEALRRLGRLEEAIAALRRALELDPDNAE 181
|
90 100 110
....*....|....*....|....*....|..
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPED 237
Cdd:COG3914 182 ALNNLGNALQDLGRLEEAIAAYRRALELDPDN 213
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
110-272 |
1.17e-03 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 40.35 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 110 MTAEERIGVADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQlfgkyrdmalavknpchlNMAACLIKLEHYEDA 189
Cdd:TIGR00990 118 LSEEERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPDPVYYS------------------NRAACHNALGDWEKV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 190 IHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDF-----VKARKFAPEDKAIARELRLLAEHD-KAVYQ-KQKEL- 261
Cdd:TIGR00990 180 VEDTTAALELDPDYSKALNRRANAYDGLGKYADALLDLtasciIDGFRNEQSAQAVERLLKKFAESKaKEILEtKPENLp 259
|
170
....*....|....*...
gi 1585708726 262 -------YKGLFGPRPEP 272
Cdd:TIGR00990 260 svtfvgnYLQSFRPKPRP 277
|
|
| PRK06483 |
PRK06483 |
dihydromonapterin reductase; Provisional |
164-274 |
2.14e-03 |
|
dihydromonapterin reductase; Provisional
Pssm-ID: 180586 [Multi-domain] Cd Length: 236 Bit Score: 38.76 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 164 MALAVKNPCHLNMA--ACLIKLEHY-EDAIHQCSIVLmedennvkalfRRGKAR-AELGQTDAAREDFVK--ARKFAPED 237
Cdd:PRK06483 102 MQIHVNAPYLLNLAleDLLRGHGHAaSDIIHITDYVV-----------EKGSDKhIAYAASKAALDNMTLsfAAKLAPEV 170
|
90 100 110
....*....|....*....|....*....|....*....
gi 1585708726 238 K--AIARELRLLAEHDKAVYqKQKELYKGLFGPRPEPKP 274
Cdd:PRK06483 171 KvnSIAPALILFNEGDDAAY-RQKALAKSLLKIEPGEEE 208
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
174-237 |
9.28e-03 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 37.22 E-value: 9.28e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1585708726 174 LNMAACLIKLEHYEDAIHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDFVKARKFAPED 237
Cdd:cd24142 4 LEKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDPDG 67
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FKBP_C |
pfam00254 |
FKBP-type peptidyl-prolyl cis-trans isomerase; |
11-96 |
8.75e-18 |
|
FKBP-type peptidyl-prolyl cis-trans isomerase;
Pssm-ID: 459735 Cd Length: 94 Bit Score: 76.85 E-value: 8.75e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 11 SVHYRAWTESTQhKFEDTWLEQRPIELVLGKEKKeMTGLSIGVSNMKSGERALLHVGWELGYGKEGNfSFPNVPPMADIL 90
Cdd:pfam00254 12 TVHYTGTLEDGT-VFDSSYDRGKPFEFTLGSGQV-IPGWDEGLVGMKVGEKRKLTIPPELAYGEEGL-AGPVIPPNATLV 88
|
....*.
gi 1585708726 91 YEVELI 96
Cdd:pfam00254 89 FEVELL 94
|
|
| FkpA |
COG0545 |
FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein ... |
2-98 |
2.22e-12 |
|
FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440311 [Multi-domain] Cd Length: 104 Bit Score: 62.12 E-value: 2.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 2 EEVQEQQNQSVHYRAWTeSTQHKFEDTWLEQRPIELVLGKEKkEMTGLSIGVSNMKSGERALLHVGWELGYGKEGNfsFP 81
Cdd:COG0545 12 AKPKAGDTVTVHYTGTL-LDGTVFDSSYDRGEPATFPLGVGQ-VIPGWDEGLQGMKVGGKRRLVIPPELAYGERGA--GG 87
|
90
....*....|....*..
gi 1585708726 82 NVPPMADILYEVELIGF 98
Cdd:COG0545 88 VIPPNSTLVFEVELLDV 104
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
126-237 |
1.84e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 61.55 E-value: 1.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFqlfgkyrdmalavknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG3914 119 GNLLLALGRLEEALAALRRALALNPDFAEA-----------------YLNLGEALRRLGRLEEAIAALRRALELDPDNAE 181
|
90 100 110
....*....|....*....|....*....|..
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPED 237
Cdd:COG3914 182 ALNNLGNALQDLGRLEEAIAAYRRALELDPDN 213
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
126-271 |
1.27e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 57.23 E-value: 1.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDdfmfqlfgkyrdMALAvknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG4785 80 GVAYDSLGDYDLAIADFDQALELDPD------------LAEA-----YNNRGLAYLLLGDYDAALEDFDRALELDPDYAY 142
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPEDkAIARELRLLAEHDKAvYQKQKELYKGLFGPRPE 271
Cdd:COG4785 143 AYLNRGIALYYLGRYELAIADLEKALELDPND-PERALWLYLAERKLD-PEKALALLLEDWATAYL 206
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
126-265 |
1.41e-08 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 54.63 E-value: 1.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDFmfqlfgkyrdmalavknPCHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG0457 49 GLAYLRLGRYEEALADYEQALELDPDDA-----------------EALNNLGLALQALGRYEEALEDYDKALELDPDDAE 111
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPED----KAIARELRLLAEHDKAVYQKQKELYKGL 265
Cdd:COG0457 112 ALYNLGLALLELGRYDEAIEAYERALELDPDDadalYNLGIALEKLGRYEEALELLEKLEAAAL 175
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
126-254 |
1.58e-08 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 54.24 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAymgddfmfqlfgKYRDMALAvknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG0457 15 GLAYRRLGRYEEAIEDYEKALE------------LDPDDAEA-----LYNLGLAYLRLGRYEEALADYEQALELDPDDAE 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPED----KAIARELRLLAEHDKAV 254
Cdd:COG0457 78 ALNNLGLALQALGRYEEALEDYDKALELDPDDaealYNLGLALLELGRYDEAI 130
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
126-263 |
5.80e-08 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 52.70 E-value: 5.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDFMfqlfgkyrdmalavknpCHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG0457 83 GLALQALGRYEEALEDYDKALELDPDDAE-----------------ALYNLGLALLELGRYDEAIEAYERALELDPDDAD 145
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPEDKAIARELRLLAEHDKAVYQKQKELYK 263
Cdd:COG0457 146 ALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLAL 203
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
126-249 |
6.07e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 50.77 E-value: 6.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDfmfqlfgkyrdmALAvknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG4235 24 GRAYLRLGRYDEALAAYEKALRLDPDN------------ADA-----LLDLAEALLAAGDTEEAEELLERALALDPDNPE 86
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPEDKAIARELRLLAE 249
Cdd:COG4235 87 ALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAE 130
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
112-254 |
8.96e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 53.07 E-value: 8.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 112 AEERIGVADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFmfqlfgkyrdmalavknPCHLNMAACLIKLEHYEDAIH 191
Cdd:COG3914 71 AAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNA-----------------EALFNLGNLLLALGRLEEALA 133
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1585708726 192 QCSIVLMEDENNVKALFRRGKARAELGQTDAAREDFVKARKFAPED----KAIARELRLLAEHDKAV 254
Cdd:COG3914 134 ALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNaealNNLGNALQDLGRLEEAI 200
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
126-237 |
1.17e-06 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 47.11 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFqlfgkyrdmalavknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG4783 45 GEILLQLGDLDEAIVLLHEALELDPDEPEA-----------------RLNLGLALLKAGDYDEALALLEKALKLDPEHPE 107
|
90 100 110
....*....|....*....|....*....|..
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPED 237
Cdd:COG4783 108 AYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
172-254 |
1.49e-06 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 48.46 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 172 CHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDFVKARKFAPED----KAIARELRLL 247
Cdd:COG0457 10 AYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDaealNNLGLALQAL 89
|
....*..
gi 1585708726 248 AEHDKAV 254
Cdd:COG0457 90 GRYEEAL 96
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
128-236 |
6.89e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.01 E-value: 6.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 128 ALFKEEKLEEAMQQYEMAIAYMGDDFmfqlfgkyrdmalavknPCHLNMAACLIKLEHYEDAIhQCSIVLMEDENNVKAL 207
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNA-----------------DALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEAL 62
|
90 100
....*....|....*....|....*....
gi 1585708726 208 FRRGKARAELGQTDAAREDFVKARKFAPE 236
Cdd:COG3063 63 LNLAELLLELGDYDEALAYLERALELDPS 91
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
85-235 |
1.70e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 44.18 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 85 PMADILYEVELIGFDETKEGKARGDMTAEERIGVADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFqlfgkyrdm 164
Cdd:COG5010 20 LRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPEL--------- 90
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1585708726 165 alavknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDFVKARKFAP 235
Cdd:COG5010 91 --------YYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
178-261 |
1.87e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 44.18 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 178 ACLIKLEHYEDAIHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDFVKARKFAPEDKAI----ARELRLLAEHDKA 253
Cdd:COG5010 62 NLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAysnlAALLLSLGQDDEA 141
|
....*...
gi 1585708726 254 VYQKQKEL 261
Cdd:COG5010 142 KAALQRAL 149
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
128-249 |
6.37e-05 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 41.52 E-value: 6.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 128 ALFKEEKLEEAMQQYEMAIAYMGDDfmfqlfgKYRDMAlavknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK-- 205
Cdd:COG1729 2 ALLKAGDYDEAIAAFKAFLKRYPNS-------PLAPDA-------LYWLGEAYYALGDYDEAAEAFEKLLKRYPDSPKap 67
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1585708726 206 -ALFRRGKARAELGQTDAAREDFVKARKFAPEDKAIARELRLLAE 249
Cdd:COG1729 68 dALLKLGLSYLELGDYDKARATLEELIKKYPDSEAAKEARARLAR 112
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
126-252 |
1.18e-04 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 42.79 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYmgddfmfqlfgkYRDMALAvknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG2956 151 AELYLEQGDYDEAIEALEKALKL------------DPDCARA-----LLLLAELYLEQGDYEEAIAALERALEQDPDYLP 213
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPEDKAIARELRLLAEHDK 252
Cdd:COG2956 214 ALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEG 260
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
126-250 |
1.75e-04 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 42.41 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 126 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFqlfgkyrdmalavknpcHLNMAACLIKLEHYEDAIHQCSIVLMEDENNVK 205
Cdd:COG2956 117 AEIYEQEGDWEKAIEVLERLLKLGPENAHA-----------------YCELAELYLEQGDYDEAIEALEKALKLDPDCAR 179
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1585708726 206 ALFRRGKARAELGQTDAAREDFVKARKFAPEDKAIARELRLLAEH 250
Cdd:COG2956 180 ALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEK 224
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
119-262 |
2.87e-04 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 40.18 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 119 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFqlfgkyrdmalavknpcHLNMAACLIKLEHYEDAIHQCSIVLM 198
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEA-----------------FALLGEILLQLGDLDEAIVLLHEALE 66
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 199 EDENNVKALFRRGKARAELGQTDAAREDFVKARKFAPED----KAIARELRLLAEHDKAV--YQKQKELY 262
Cdd:COG4783 67 LDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHpeayLRLARAYRALGRPDEAIaaLEKALELD 136
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
110-272 |
1.17e-03 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 40.35 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 110 MTAEERIGVADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQlfgkyrdmalavknpchlNMAACLIKLEHYEDA 189
Cdd:TIGR00990 118 LSEEERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPDPVYYS------------------NRAACHNALGDWEKV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 190 IHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDF-----VKARKFAPEDKAIARELRLLAEHD-KAVYQ-KQKEL- 261
Cdd:TIGR00990 180 VEDTTAALELDPDYSKALNRRANAYDGLGKYADALLDLtasciIDGFRNEQSAQAVERLLKKFAESKaKEILEtKPENLp 259
|
170
....*....|....*...
gi 1585708726 262 -------YKGLFGPRPEP 272
Cdd:TIGR00990 260 svtfvgnYLQSFRPKPRP 277
|
|
| PRK06483 |
PRK06483 |
dihydromonapterin reductase; Provisional |
164-274 |
2.14e-03 |
|
dihydromonapterin reductase; Provisional
Pssm-ID: 180586 [Multi-domain] Cd Length: 236 Bit Score: 38.76 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 164 MALAVKNPCHLNMA--ACLIKLEHY-EDAIHQCSIVLmedennvkalfRRGKAR-AELGQTDAAREDFVK--ARKFAPED 237
Cdd:PRK06483 102 MQIHVNAPYLLNLAleDLLRGHGHAaSDIIHITDYVV-----------EKGSDKhIAYAASKAALDNMTLsfAAKLAPEV 170
|
90 100 110
....*....|....*....|....*....|....*....
gi 1585708726 238 K--AIARELRLLAEHDKAVYqKQKELYKGLFGPRPEPKP 274
Cdd:PRK06483 171 KvnSIAPALILFNEGDDAAY-RQKALAKSLLKIEPGEEE 208
|
|
| LcrH_SycD |
TIGR02552 |
type III secretion low calcium response chaperone LcrH/SycD; Genes in this family are found in ... |
155-249 |
6.24e-03 |
|
type III secretion low calcium response chaperone LcrH/SycD; Genes in this family are found in type III secretion operons. LcrH, from Yersinia is believed to have a regulatory function in the low-calcium response of the secretion system. The same protein is also known as SycD (SYC = Specific Yop Chaperone) for its chaperone role. In Pseudomonas, where the homolog is known as PcrH, the chaperone role has been demonstrated and the regulatory role appears to be absent. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.
Pssm-ID: 274197 [Multi-domain] Cd Length: 135 Bit Score: 36.12 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 155 FQLF--GKYRDMA-----LAVKNPC----HLNMAACLIKLEHYEDAIHQCSIVLMEDENNVKALFRRGKARAELGQTDAA 223
Cdd:TIGR02552 25 YNLYqqGRYDEALklfqlLAAYDPYnsryWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAECLLALGEPESA 104
|
90 100
....*....|....*....|....*.
gi 1585708726 224 REDFVKARKFAPEDKAIArELRLLAE 249
Cdd:TIGR02552 105 LKALDLAIEICGENPEYS-ELKERAE 129
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
133-260 |
8.78e-03 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 37.02 E-value: 8.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1585708726 133 EKLEEAMQQYEMAIAYMGDDFMFQlfGKYRD--------MALAVKNP-CHLNMAACLIKLEHYEDAIHQCSIVLMEDENN 203
Cdd:COG2956 66 QKLLERDPDRAEALLELAQDYLKA--GLLDRaeelleklLELDPDDAeALRLLAEIYEQEGDWEKAIEVLERLLKLGPEN 143
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1585708726 204 VKALFRRGKARAELGQTDAAREDFVKARKFAPEDkaiARELRLLAEhdkaVYQKQKE 260
Cdd:COG2956 144 AHAYCELAELYLEQGDYDEAIEALEKALKLDPDC---ARALLLLAE----LYLEQGD 193
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
174-237 |
9.28e-03 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 37.22 E-value: 9.28e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1585708726 174 LNMAACLIKLEHYEDAIHQCSIVLMEDENNVKALFRRGKARAELGQTDAAREDFVKARKFAPED 237
Cdd:cd24142 4 LEKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDPDG 67
|
|
| |
