|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
142-452 |
4.59e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 94.23 E-value: 4.59e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 142 SGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVM 221
Cdd:COG4886 16 LLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 222 KNLKVLSLKDNNVTAVPTilppNLLELYLYNNIIKRIqEHDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHD 301
Cdd:COG4886 96 TNLTELDLSGNEELSNLT----NLESLDLSGNQLTDL-PEELANLTNLKELDLSNN--------------------QLTD 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 302 --NAFDSLTELKVLRLHSNSLQHVPAEwFKNMSNLQELDLSQNYLAreiEEAKFLNSLPNLVQLDLSFNyELQvyhasiT 379
Cdd:COG4886 151 lpEPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGN-QLT------D 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046907584 380 LPHSLSSLTKLKNLYIKGyvfKELKDssLSVLHNLSNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 452
Cdd:COG4886 220 LPEPLANLTNLETLDLSN---NQLTD--LPELGNLTNLEELDLSNN--QLTDLPPLANLTNLKTLDLSNNQLT 285
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
208-752 |
2.42e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 94.14 E-value: 2.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 208 NVSYSIEKDAFLVMKNLKVLSLKDNNVT-AVPTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCpRCYNVPy 286
Cdd:PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV-LVGKIP- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 287 pctpcennsplqihdNAFDSLTELKVLRLHSNSLQ-HVPAEWFKnMSNLQELDLSQNYLAREIeeAKFLNSLPNLVQLDL 365
Cdd:PLN00113 182 ---------------NSLTNLTSLEFLTLASNQLVgQIPRELGQ-MKSLKWIYLGYNNLSGEI--PYEIGGLTSLNHLDL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 366 SFNyelqvyHASITLPHSLSSLTKLKNLYIkgYVFKeLKDSSLSVLHNLSNLEVLDLGTNFI--KIADLNIfqQFENLKF 443
Cdd:PLN00113 244 VYN------NLTGPIPSSLGNLKNLQYLFL--YQNK-LSGPIPPSIFSLQKLISLDLSDNSLsgEIPELVI--QLQNLEI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 444 IDLSVNKISpseesrevGLCPNAQTSVdwhgPQvLEALHYFrydeyarSCRFKNKepptfLPLNADCHTYGKTLDLSRNN 523
Cdd:PLN00113 313 LHLFSNNFT--------GKIPVALTSL----PR-LQVLQLW-------SNKFSGE-----IPKNLGKHNNLTVLDLSTNN 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 524 ------------------IFFIK------PSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYST 579
Cdd:PLN00113 368 ltgeipeglcssgnlfklILFSNslegeiPKSLGACRSLRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQGRINS 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 580 AFEELQNLEILDLSSNShyFQAEgithmLNFTKKLRHLEKLMMNDNDISTSASRTMESES-LRVLEFRGNHLdvlwrDGD 658
Cdd:PLN00113 447 RKWDMPSLQMLSLARNK--FFGG-----LPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSeLMQLKLSENKL-----SGE 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 659 -NRYLDFFKNLLNleeLDISRNSLNSVPPGVFEGMPPnlttlslaknglrsfswgrlqllkhLKNLDLSHNQLT-TVPAR 736
Cdd:PLN00113 515 iPDELSSCKKLVS---LDLSHNQLSGQIPASFSEMPV-------------------------LSQLDLSQNQLSgEIPKN 566
|
570
....*....|....*.
gi 1046907584 737 LANCsKSLTKLILNHN 752
Cdd:PLN00113 567 LGNV-ESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
515-781 |
3.28e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.53 E-value: 3.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 515 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRldllystAFEELQNLEILDLSS 594
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 595 NShyfqaegITHMLNFTKKLRHLEKLMMNDNDISTsasrtmeseslrvlefrgnhldvlwrdgdnrYLDFFKNLLNLEEL 674
Cdd:COG4886 123 NQ-------LTDLPEELANLTNLKELDLSNNQLTD-------------------------------LPEPLGNLTNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 675 DISRNSLNSVPPgVFEGMPpNLTTLSLAKNGLRSFSWGrLQLLKHLKNLDLSHNQLTTVPARLANCsKSLTKLILNHNQI 754
Cdd:COG4886 165 DLSNNQLTDLPE-ELGNLT-NLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANL-TNLETLDLSNNQL 240
|
250 260
....*....|....*....|....*..
gi 1046907584 755 RQLTKyfLEDALQLRYLDISSNKIQVI 781
Cdd:COG4886 241 TDLPE--LGNLTNLEELDLSNNQLTDL 265
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
138-595 |
5.59e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 76.81 E-value: 5.59e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 138 PGSFSGLSDLKSLYLDGNQLL-EIPQDlpsslqllsleannifsitkenLSELVNIESLYLGQNcyyrnpcNVSYSIEKD 216
Cdd:PLN00113 181 PNSLTNLTSLEFLTLASNQLVgQIPRE----------------------LGQMKSLKWIYLGYN-------NLSGEIPYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 217 aFLVMKNLKVLSLKDNNVTA-VPTILP--PNLLELYLYNNIIK-RIQEHDFNkLSQLQVLDLSGNCpRCYNVPYPCTPCE 292
Cdd:PLN00113 232 -IGGLTSLNHLDLVYNNLTGpIPSSLGnlKNLQYLFLYQNKLSgPIPPSIFS-LQKLISLDLSDNS-LSGEIPELVIQLQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 293 NNSPLQIHDNAFD--------SLTELKVLRLHSNSLQ-HVPAEWFKNmSNLQELDLSQNYLAREIEEAkfLNSLPNLVQL 363
Cdd:PLN00113 309 NLEILHLFSNNFTgkipvaltSLPRLQVLQLWSNKFSgEIPKNLGKH-NNLTVLDLSTNNLTGEIPEG--LCSSGNLFKL 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 364 DL-SFNYELQVyhasitlPHSLSSLTKLKNLyikgyvfkELKDSSLSVlhnlsnlevlDLGTNFIKIADLNifqqfenlk 442
Cdd:PLN00113 386 ILfSNSLEGEI-------PKSLGACRSLRRV--------RLQDNSFSG----------ELPSEFTKLPLVY--------- 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 443 FIDLSVNKISPSEESREvglcpnaqtsvdWHGPQvLEALHYFRYdeyarscRFKNKEPPTFLPLNAdchtygKTLDLSRN 522
Cdd:PLN00113 432 FLDISNNNLQGRINSRK------------WDMPS-LQMLSLARN-------KFFGGLPDSFGSKRL------ENLDLSRN 485
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046907584 523 NIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSN 595
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
909-1054 |
8.96e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 69.27 E-value: 8.96e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 909 CYDAFIVYdtknsAVTEWVLQELVVKLEDpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKM 988
Cdd:smart00255 1 EYDVFISY-----SGKEDVRNEFLSHLLE-KLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLD 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 989 AFYLSHQRLMDEKVDVIILIFLEK----PLQKSKFLQLRKRlcsSSVLEWPTNPQAHpyFWqclKNALTT 1054
Cdd:smart00255 75 ELVAALENALEEGGLRVIPIFYEVipsdVRKQPGKFRKVFK---KNYLKWPEDEKEQ--FW---KKALYA 136
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
216-368 |
7.79e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.88 E-value: 7.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 216 DAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQehDFNKLSQLQVLDLSGNCPRC----YNvpypctp 290
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIENLEFlTNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVveglEN------- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 291 CENNSPLQIHDN--------AFDSLT------ELKVLRLHSNSLQHVpaEWFKNMSNLQELDLSQNYLaREIEEAK-FLN 355
Cdd:cd21340 89 LTNLEELHIENQrlppgeklTFDPRSlaalsnSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQI-SDLEELLdLLS 165
|
170
....*....|...
gi 1046907584 356 SLPNLVQLDLSFN 368
Cdd:cd21340 166 SWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
308-368 |
1.17e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 1.17e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1046907584 308 TELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLaREIEEAKFLNsLPNLVQLDLSFN 368
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSG-LPSLRYLDLSGN 59
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
910-1035 |
2.92e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 57.37 E-value: 2.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 910 YDAFIvyDTKNSAVTEWVLQELvvkLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAktESFKMA 989
Cdd:pfam01582 1 YDVFL--SFRGSDTREWFVSHL---LKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYA--SSGWCL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1046907584 990 FYLSH-QRLMDEKVDVIILIFLEK-----PLQKSKFLQLRKRLCS----SSVLEWP 1035
Cdd:pfam01582 74 DELVKiLECALDLGQKVIPIFYEVdpsdvRKQTGSFGKAFKKHKKvlteEKVLKWR 129
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
515-573 |
4.79e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 4.79e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1046907584 515 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIgQTLNGSELQPLRELRYLDFSNNRL 573
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
556-760 |
6.79e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 54.41 E-value: 6.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 556 ELQPLRELRYLDFSNNRLDLLysTAFEELQNLEILDLSSNShyfqaegITHMLNFTKkLRHLEKLMMNDNDIStsasrtm 635
Cdd:cd21340 19 NLSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ-------IEKIENLEN-LVNLKKLYLGGNRIS------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 636 eseslrVLEfrgnHLDvlwrdgdnryldffkNLLNLEELDISRNSLnsvPPGV---FE-----GMPPNLTTLSLAKNGLR 707
Cdd:cd21340 82 ------VVE----GLE---------------NLTNLEELHIENQRL---PPGEkltFDprslaALSNSLRVLNISGNNID 133
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1046907584 708 SFSWgrLQLLKHLKNLDLSHNQLTTVP--ARLANCSKSLTKLILNHNQIRQLTKY 760
Cdd:cd21340 134 SLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCKKPKY 186
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
93-157 |
4.30e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 4.30e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046907584 93 NHIPSISPDSFHRLKHLEELDLRCNCVPIllgskanvctkrlqIRPGSFSGLSDLKSLYLDGNQL 157
Cdd:pfam13855 11 NRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
743-786 |
9.79e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 9.79e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 1046907584 743 SLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKTSF 786
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAF 45
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
142-452 |
4.59e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 94.23 E-value: 4.59e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 142 SGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVM 221
Cdd:COG4886 16 LLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 222 KNLKVLSLKDNNVTAVPTilppNLLELYLYNNIIKRIqEHDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHD 301
Cdd:COG4886 96 TNLTELDLSGNEELSNLT----NLESLDLSGNQLTDL-PEELANLTNLKELDLSNN--------------------QLTD 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 302 --NAFDSLTELKVLRLHSNSLQHVPAEwFKNMSNLQELDLSQNYLAreiEEAKFLNSLPNLVQLDLSFNyELQvyhasiT 379
Cdd:COG4886 151 lpEPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGN-QLT------D 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046907584 380 LPHSLSSLTKLKNLYIKGyvfKELKDssLSVLHNLSNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 452
Cdd:COG4886 220 LPEPLANLTNLETLDLSN---NQLTD--LPELGNLTNLEELDLSNN--QLTDLPPLANLTNLKTLDLSNNQLT 285
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
208-752 |
2.42e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 94.14 E-value: 2.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 208 NVSYSIEKDAFLVMKNLKVLSLKDNNVT-AVPTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCpRCYNVPy 286
Cdd:PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV-LVGKIP- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 287 pctpcennsplqihdNAFDSLTELKVLRLHSNSLQ-HVPAEWFKnMSNLQELDLSQNYLAREIeeAKFLNSLPNLVQLDL 365
Cdd:PLN00113 182 ---------------NSLTNLTSLEFLTLASNQLVgQIPRELGQ-MKSLKWIYLGYNNLSGEI--PYEIGGLTSLNHLDL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 366 SFNyelqvyHASITLPHSLSSLTKLKNLYIkgYVFKeLKDSSLSVLHNLSNLEVLDLGTNFI--KIADLNIfqQFENLKF 443
Cdd:PLN00113 244 VYN------NLTGPIPSSLGNLKNLQYLFL--YQNK-LSGPIPPSIFSLQKLISLDLSDNSLsgEIPELVI--QLQNLEI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 444 IDLSVNKISpseesrevGLCPNAQTSVdwhgPQvLEALHYFrydeyarSCRFKNKepptfLPLNADCHTYGKTLDLSRNN 523
Cdd:PLN00113 313 LHLFSNNFT--------GKIPVALTSL----PR-LQVLQLW-------SNKFSGE-----IPKNLGKHNNLTVLDLSTNN 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 524 ------------------IFFIK------PSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYST 579
Cdd:PLN00113 368 ltgeipeglcssgnlfklILFSNslegeiPKSLGACRSLRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQGRINS 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 580 AFEELQNLEILDLSSNShyFQAEgithmLNFTKKLRHLEKLMMNDNDISTSASRTMESES-LRVLEFRGNHLdvlwrDGD 658
Cdd:PLN00113 447 RKWDMPSLQMLSLARNK--FFGG-----LPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSeLMQLKLSENKL-----SGE 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 659 -NRYLDFFKNLLNleeLDISRNSLNSVPPGVFEGMPPnlttlslaknglrsfswgrlqllkhLKNLDLSHNQLT-TVPAR 736
Cdd:PLN00113 515 iPDELSSCKKLVS---LDLSHNQLSGQIPASFSEMPV-------------------------LSQLDLSQNQLSgEIPKN 566
|
570
....*....|....*.
gi 1046907584 737 LANCsKSLTKLILNHN 752
Cdd:PLN00113 567 LGNV-ESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
515-781 |
3.28e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.53 E-value: 3.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 515 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRldllystAFEELQNLEILDLSS 594
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 595 NShyfqaegITHMLNFTKKLRHLEKLMMNDNDISTsasrtmeseslrvlefrgnhldvlwrdgdnrYLDFFKNLLNLEEL 674
Cdd:COG4886 123 NQ-------LTDLPEELANLTNLKELDLSNNQLTD-------------------------------LPEPLGNLTNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 675 DISRNSLNSVPPgVFEGMPpNLTTLSLAKNGLRSFSWGrLQLLKHLKNLDLSHNQLTTVPARLANCsKSLTKLILNHNQI 754
Cdd:COG4886 165 DLSNNQLTDLPE-ELGNLT-NLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANL-TNLETLDLSNNQL 240
|
250 260
....*....|....*....|....*..
gi 1046907584 755 RQLTKyfLEDALQLRYLDISSNKIQVI 781
Cdd:COG4886 241 TDLPE--LGNLTNLEELDLSNNQLTDL 265
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
515-860 |
2.40e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 88.84 E-value: 2.40e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 515 KTLDLSRNNIFFikpsdfkHLSFLKCLNLSGNAIGQTlnGSELQPLRELRYLDFSNNRLDLLySTAFEELQNLEILDLSS 594
Cdd:COG4886 99 TELDLSGNEELS-------NLTNLESLDLSGNQLTDL--PEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSN 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 595 NshyfqaeGITHMLNFTKKLRHLEKLMMNDNDISTSASRTMESESLRVLEFRGNHLDVLwrdgdnryLDFFKNLLNLEEL 674
Cdd:COG4886 169 N-------QLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDL--------PEPLANLTNLETL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 675 DISRNSLNSVPpgVFEGMPpNLTTLSLAKNGLRSFSwgRLQLLKHLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 754
Cdd:COG4886 234 DLSNNQLTDLP--ELGNLT-NLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 755 RQLTKYFLEDALQLRYLDISSNKIQVIQKTSFPENVLNNLNMLLLHHNRFLCNCDAVWFVWWVNHTDVTIPYLATDVTCA 834
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
|
330 340
....*....|....*....|....*.
gi 1046907584 835 GPGAHKGQSVISLDLYTCELDLTNLI 860
Cdd:COG4886 389 LLLLLLTTTAGVLLLTLALLDAVNTE 414
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
99-462 |
2.49e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 2.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 99 SPDSFHRLKHLEELDLRCNcvpillgskanvctkRLQIRPGSFSGLSDLKSLYLDGNQLLEIPqdlpsslqllsleanni 178
Cdd:COG4886 105 GNEELSNLTNLESLDLSGN---------------QLTDLPEELANLTNLKELDLSNNQLTDLP----------------- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 179 fsitkENLSELVNIESLYLGQNcyyrnpcnvsySIEK--DAFLVMKNLKVLSLKDNNVTAVPTIL--PPNLLELYLYNNI 254
Cdd:COG4886 153 -----EPLGNLTNLKSLDLSNN-----------QLTDlpEELGNLTNLKELDLSNNQITDLPEPLgnLTNLEELDLSGNQ 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 255 IKRIQEhDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHD-NAFDSLTELKVLRLHSNSLQHVPAEwfKNMSN 333
Cdd:COG4886 217 LTDLPE-PLANLTNLETLDLSNN--------------------QLTDlPELGNLTNLEELDLSNNQLTDLPPL--ANLTN 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 334 LQELDLSQNYLAR-EIEEAKFLNSLPNLVQLDLSFNYELQVYHASITLPHSLSSLTKLKNLYIKGYVFKELKDSSLSVLH 412
Cdd:COG4886 274 LKTLDLSNNQLTDlKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1046907584 413 NLSNLEVLDLGTNFIKIADLNIFQQFENLKFIDLSVNKISPSEESREVGL 462
Cdd:COG4886 354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLL 403
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
174-452 |
2.87e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.29 E-value: 2.87e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 174 EANNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVMKNLKVLSLKDNNVTAVPTILPPNLLELYLYNN 253
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 254 IIKRIQEHDFNKLSQLQVLDLSGNCPRcynvpypcTPCENNSPLQIHDN-------AFDSLTELKVLRLHSNSLQHVPAE 326
Cdd:COG4886 83 SLLLLGLTDLGDLTNLTELDLSGNEEL--------SNLTNLESLDLSGNqltdlpeELANLTNLKELDLSNNQLTDLPEP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 327 wFKNMSNLQELDLSQNYLaREIEEAkfLNSLPNLVQLDLSFNyelqvyhaSIT-LPHSLSSLTKLKNLYIKGYVFKELKD 405
Cdd:COG4886 155 -LGNLTNLKSLDLSNNQL-TDLPEE--LGNLTNLKELDLSNN--------QITdLPEPLGNLTNLEELDLSGNQLTDLPE 222
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1046907584 406 SslsvLHNLSNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 452
Cdd:COG4886 223 P----LANLTNLETLDLSNN--QLTDLPELGNLTNLEELDLSNNQLT 263
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
138-595 |
5.59e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 76.81 E-value: 5.59e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 138 PGSFSGLSDLKSLYLDGNQLL-EIPQDlpsslqllsleannifsitkenLSELVNIESLYLGQNcyyrnpcNVSYSIEKD 216
Cdd:PLN00113 181 PNSLTNLTSLEFLTLASNQLVgQIPRE----------------------LGQMKSLKWIYLGYN-------NLSGEIPYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 217 aFLVMKNLKVLSLKDNNVTA-VPTILP--PNLLELYLYNNIIK-RIQEHDFNkLSQLQVLDLSGNCpRCYNVPYPCTPCE 292
Cdd:PLN00113 232 -IGGLTSLNHLDLVYNNLTGpIPSSLGnlKNLQYLFLYQNKLSgPIPPSIFS-LQKLISLDLSDNS-LSGEIPELVIQLQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 293 NNSPLQIHDNAFD--------SLTELKVLRLHSNSLQ-HVPAEWFKNmSNLQELDLSQNYLAREIEEAkfLNSLPNLVQL 363
Cdd:PLN00113 309 NLEILHLFSNNFTgkipvaltSLPRLQVLQLWSNKFSgEIPKNLGKH-NNLTVLDLSTNNLTGEIPEG--LCSSGNLFKL 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 364 DL-SFNYELQVyhasitlPHSLSSLTKLKNLyikgyvfkELKDSSLSVlhnlsnlevlDLGTNFIKIADLNifqqfenlk 442
Cdd:PLN00113 386 ILfSNSLEGEI-------PKSLGACRSLRRV--------RLQDNSFSG----------ELPSEFTKLPLVY--------- 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 443 FIDLSVNKISPSEESREvglcpnaqtsvdWHGPQvLEALHYFRYdeyarscRFKNKEPPTFLPLNAdchtygKTLDLSRN 522
Cdd:PLN00113 432 FLDISNNNLQGRINSRK------------WDMPS-LQMLSLARN-------KFFGGLPDSFGSKRL------ENLDLSRN 485
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046907584 523 NIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSN 595
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
909-1054 |
8.96e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 69.27 E-value: 8.96e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 909 CYDAFIVYdtknsAVTEWVLQELVVKLEDpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKM 988
Cdd:smart00255 1 EYDVFISY-----SGKEDVRNEFLSHLLE-KLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLD 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 989 AFYLSHQRLMDEKVDVIILIFLEK----PLQKSKFLQLRKRlcsSSVLEWPTNPQAHpyFWqclKNALTT 1054
Cdd:smart00255 75 ELVAALENALEEGGLRVIPIFYEVipsdVRKQPGKFRKVFK---KNYLKWPEDEKEQ--FW---KKALYA 136
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
293-768 |
3.46e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 69.58 E-value: 3.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 293 NNSPLQIHDNAFDSLTELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLAREIEEAKFLNSLPNLVQLDLSFNYELQ 372
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 373 VYHASITLPHSLSSLTKLKNLYIkgyvfkelkdSSLSVLHNLSNLEVLDLGTNFIKiadlNIFQQFENLKFIdlsvnkis 452
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDL----------SGNEELSNLTNLESLDLSGNQLT----DLPEELANLTNL-------- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 453 pseesrevglcpnaqtsvdwhgpqvlealhyfrydeyarscrfknkepptflplnadchtygKTLDLSRNNIFFIkPSDF 532
Cdd:COG4886 139 --------------------------------------------------------------KELDLSNNQLTDL-PEPL 155
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 533 KHLSFLKCLNLSGNAIgQTLnGSELQPLRELRYLDFSNNRLDLLySTAFEELQNLEILDLSSNshyfqaeGITHMLNFTK 612
Cdd:COG4886 156 GNLTNLKSLDLSNNQL-TDL-PEELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN-------QLTDLPEPLA 225
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 613 KLRHLEKLMMNDNDISTsasrtmeseslrvlefrgnhldvlwrdgdnryLDFFKNLLNLEELDISRNSLNSVPPgvfEGM 692
Cdd:COG4886 226 NLTNLETLDLSNNQLTD--------------------------------LPELGNLTNLEELDLSNNQLTDLPP---LAN 270
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046907584 693 PPNLTTLSLAKNGLRSFSWGRLQLLKHLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDALQL 768
Cdd:COG4886 271 LTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSL 346
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
216-368 |
7.79e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.88 E-value: 7.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 216 DAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQehDFNKLSQLQVLDLSGNCPRC----YNvpypctp 290
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIENLEFlTNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVveglEN------- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 291 CENNSPLQIHDN--------AFDSLT------ELKVLRLHSNSLQHVpaEWFKNMSNLQELDLSQNYLaREIEEAK-FLN 355
Cdd:cd21340 89 LTNLEELHIENQrlppgeklTFDPRSlaalsnSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQI-SDLEELLdLLS 165
|
170
....*....|...
gi 1046907584 356 SLPNLVQLDLSFN 368
Cdd:cd21340 166 SWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
308-368 |
1.17e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 1.17e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1046907584 308 TELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLaREIEEAKFLNsLPNLVQLDLSFN 368
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSG-LPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
221-397 |
1.77e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 59.03 E-value: 1.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 221 MKNLKVLSLKDNNVTAVPTI-LPPNLLELYLYNNIIKRIQehDFNKLSQLQVLDLSGNCprcynvpypCTPCENnsplqi 299
Cdd:cd21340 1 LKRITHLYLNDKNITKIDNLsLCKNLKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQ---------IEKIEN------ 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 300 hdnaFDSLTELKVLRLHSNSLQHVpaEWFKNMSNLQELDLSQNYLARE--------------------------IEEAKF 353
Cdd:cd21340 64 ----LENLVNLKKLYLGGNRISVV--EGLENLTNLEELHIENQRLPPGekltfdprslaalsnslrvlnisgnnIDSLEP 137
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1046907584 354 LNSLPNLVQLDLSFNyELQVYHAsitLPHSLSSLTKLKNLYIKG 397
Cdd:cd21340 138 LAPLRNLEQLDASNN-QISDLEE---LLDLLSSWPSLRELDLTG 177
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
910-1035 |
2.92e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 57.37 E-value: 2.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 910 YDAFIvyDTKNSAVTEWVLQELvvkLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAktESFKMA 989
Cdd:pfam01582 1 YDVFL--SFRGSDTREWFVSHL---LKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYA--SSGWCL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1046907584 990 FYLSH-QRLMDEKVDVIILIFLEK-----PLQKSKFLQLRKRLCS----SSVLEWP 1035
Cdd:pfam01582 74 DELVKiLECALDLGQKVIPIFYEVdpsdvRKQTGSFGKAFKKHKKvlteEKVLKWR 129
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
122-385 |
3.47e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 57.78 E-value: 3.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 122 LLGSKANVCTKRLQIRPGSFSGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSItKENLSElvNIESLYLGQNC 201
Cdd:PRK15370 176 LKNNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSI-PATLPD--TIQEMELSINR 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 202 YYRNPCNVSYSiekdaflvmknLKVLSLKDNNVTAVPTILPPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCprc 281
Cdd:PRK15370 253 ITELPERLPSA-----------LQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA--- 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 282 ynvpYPCTPCENNSPLQIHDNAFDSL-----TELKVLRLHSNSLQHVPAEWfknMSNLQELDLSQNYLAREIEeakflnS 356
Cdd:PRK15370 319 ----LPETLPPGLKTLEAGENALTSLpaslpPELQVLDVSKNQITVLPETL---PPTITTLDVSRNALTNLPE------N 385
|
250 260 270
....*....|....*....|....*....|
gi 1046907584 357 LPNLVQ-LDLSFNyelQVYHASITLPHSLS 385
Cdd:PRK15370 386 LPAALQiMQASRN---NLVRLPESLPHFRG 412
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
515-573 |
4.79e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 4.79e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1046907584 515 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIgQTLNGSELQPLRELRYLDFSNNRL 573
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
556-760 |
6.79e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 54.41 E-value: 6.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 556 ELQPLRELRYLDFSNNRLDLLysTAFEELQNLEILDLSSNShyfqaegITHMLNFTKkLRHLEKLMMNDNDIStsasrtm 635
Cdd:cd21340 19 NLSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ-------IEKIENLEN-LVNLKKLYLGGNRIS------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 636 eseslrVLEfrgnHLDvlwrdgdnryldffkNLLNLEELDISRNSLnsvPPGV---FE-----GMPPNLTTLSLAKNGLR 707
Cdd:cd21340 82 ------VVE----GLE---------------NLTNLEELHIENQRL---PPGEkltFDprslaALSNSLRVLNISGNNID 133
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1046907584 708 SFSWgrLQLLKHLKNLDLSHNQLTTVP--ARLANCSKSLTKLILNHNQIRQLTKY 760
Cdd:cd21340 134 SLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCKKPKY 186
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
660-778 |
7.54e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 56.63 E-value: 7.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 660 RYLDFFKNLL---------NLEELDISRNSLNSVPpgvfEGMPPNLTTLSLAKNGLRSFSwgrLQLLKHLKNLDLSHNQL 730
Cdd:PRK15370 286 RYLSVYDNSIrtlpahlpsGITHLNVQSNSLTALP----ETLPPGLKTLEAGENALTSLP---ASLPPELQVLDVSKNQI 358
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1046907584 731 TTVPARLancSKSLTKLILNHNQIRQLTKYfLEDALQlrYLDISSNKI 778
Cdd:PRK15370 359 TVLPETL---PPTITTLDVSRNALTNLPEN-LPAALQ--IMQASRNNL 400
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
694-754 |
1.80e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.06 E-value: 1.80e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1046907584 694 PNLTTLSLAKNGLRSFSWGRLQLLKHLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 754
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
532-778 |
2.28e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 532 FKHLSFLKCLNLSGNAIGQ---TLNGSELQPLRELRYLDFSNNRL-DLLYST-----AFEELQNLEILDLSSNShyFQAE 602
Cdd:cd00116 19 LPKLLCLQVLRLEGNTLGEeaaKALASALRPQPSLKELCLSLNETgRIPRGLqsllqGLTKGCGLQELDLSDNA--LGPD 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 603 GITHMLNFTKKLRhLEKLMMNDNDISTSASR------TMESESLRVLEFRGNHLDVlwrDGDNRYLDFFKNLLNLEELDI 676
Cdd:cd00116 97 GCGVLESLLRSSS-LQELKLNNNGLGDRGLRllakglKDLPPALEKLVLGRNRLEG---ASCEALAKALRANRDLKELNL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 677 SRNSLNsvPPGV---FEGMP--PNLTTLSLAKNGLR----SFSWGRLQLLKHLKNLDLSHNQLTTVPAR-----LANCSK 742
Cdd:cd00116 173 ANNGIG--DAGIralAEGLKanCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLTDAGAAalasaLLSPNI 250
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1046907584 743 SLTKLILNHNQIRQLT----KYFLEDALQLRYLDISSNKI 778
Cdd:cd00116 251 SLLTLSLSCNDITDDGakdlAEVLAEKESLLELDLRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
93-157 |
4.30e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 4.30e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046907584 93 NHIPSISPDSFHRLKHLEELDLRCNCVPIllgskanvctkrlqIRPGSFSGLSDLKSLYLDGNQL 157
Cdd:pfam13855 11 NRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
293-344 |
6.62e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.13 E-value: 6.62e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1046907584 293 NNSPLQIHDNAFDSLTELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYL 344
Cdd:pfam13855 10 NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
145-368 |
8.34e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.16 E-value: 8.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 145 SDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLSELvniESLYLGQNCYYRNPCNVSysiekdaflvmKNL 224
Cdd:PRK15370 220 GNIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSAL---QSLDLFHNKISCLPENLP-----------EEL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 225 KVLSLKDNNVTAVPTILPPNLLELYLYNNIIK----------RIQEHDFNKLS--------QLQVLDLSGNcpRCYNVPY 286
Cdd:PRK15370 286 RYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTalpetlppglKTLEAGENALTslpaslppELQVLDVSKN--QITVLPE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 287 PCTPcennsplqihdnafdSLTELKVLRlhsNSLQHVPaewfKNM-SNLQELDLSQNYLAREIEE-AKFLNSLPNLVQLD 364
Cdd:PRK15370 364 TLPP---------------TITTLDVSR---NALTNLP----ENLpAALQIMQASRNNLVRLPESlPHFRGEGPQPTRII 421
|
....
gi 1046907584 365 LSFN 368
Cdd:PRK15370 422 VEYN 425
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
913-1011 |
1.91e-06 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 47.70 E-value: 1.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 913 FIVYDTKNSAVTEWVLQELvvkledpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKMAFYL 992
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90
....*....|....*....
gi 1046907584 993 SHQRLMDEKvdVIILIFLE 1011
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLE 91
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
516-767 |
2.07e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 51.33 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 516 TLDLSRNNIFFIKPSDF-KHLSF---LKCLNLSGNAIGqtLNGSE-----LQPLRELRYLDFSNNRLD----LLYSTAFE 582
Cdd:COG5238 184 TVYLGCNQIGDEGIEELaEALTQnttVTTLWLKRNPIG--DEGAEilaeaLKGNKSLTTLDLSNNQIGdegvIALAEALK 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 583 ELQNLEILDLSSNshYFQAEGITHMLNFTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFRGNHLDVlwrDG 657
Cdd:COG5238 262 NNTTVETLYLSGN--QIGAEGAIALAKALQGNTTLTSLDLSVNRIGDEGAIALaeglqGNKTLHTLNLAYNGIGA---QG 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 658 DNRYLDFFKNLLNLEELDISRNSLNSvppgvfEGM---------PPNLTTLSLAKNGLRSFswGRLQLLKHLKnldlsHN 728
Cdd:COG5238 337 AIALAKALQENTTLHSLDLSDNQIGD------EGAialakylegNTTLRELNLGKNNIGKQ--GAEALIDALQ-----TN 403
|
250 260 270
....*....|....*....|....*....|....*....
gi 1046907584 729 QLTTvparlancsksltkLILNHNQIRQLTKYFLEDALQ 767
Cdd:COG5238 404 RLHT--------------LILDGNLIGAEAQQRLEQLLE 428
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
93-277 |
2.46e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 51.09 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 93 NHIPSIsPDSFHRLKHLEELDLRCNCVPILlgskanvctkrlqirPGSFSGLSDLKSLYLDGNQLLEIPqdlpsslqlls 172
Cdd:COG4886 169 NQLTDL-PEELGNLTNLKELDLSNNQITDL---------------PEPLGNLTNLEELDLSGNQLTDLP----------- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 173 leannifsitkENLSELVNIESLYLGQNcyyrnpcNVSysiEKDAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLY 251
Cdd:COG4886 222 -----------EPLANLTNLETLDLSNN-------QLT---DLPELGNLTNLEELDLSNNQLTDLPPLANlTNLKTLDLS 280
|
170 180
....*....|....*....|....*.
gi 1046907584 252 NNIIKRIQEHDFNKLSQLQVLDLSGN 277
Cdd:COG4886 281 NNQLTDLKLKELELLLGLNSLLLLLL 306
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
538-778 |
2.70e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 50.94 E-value: 2.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 538 LKCLNLSGNAIGQtlngselQPLRELRYLDFSNNRLDLLYstafeeLQNLEILDLssnshyfQAEGITHMLNFTKKLRHL 617
Cdd:COG5238 182 VETVYLGCNQIGD-------EGIEELAEALTQNTTVTTLW------LKRNPIGDE-------GAEILAEALKGNKSLTTL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 618 EklmMNDNDISTS-----ASRTMESESLRVLEFRGNHLDVlwrDGDNRYLDFFKNLLNLEELDISRNSLNSvpPGVF--- 689
Cdd:COG5238 242 D---LSNNQIGDEgvialAEALKNNTTVETLYLSGNQIGA---EGAIALAKALQGNTTLTSLDLSVNRIGD--EGAIala 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 690 EGMPPN--LTTLSLAKNGLRSFSWGRL----QLLKHLKNLDLSHNQLT----TVPARLANCSKSLTKLILNHNQIRQLTK 759
Cdd:COG5238 314 EGLQGNktLHTLNLAYNGIGAQGAIALakalQENTTLHSLDLSDNQIGdegaIALAKYLEGNTTLRELNLGKNNIGKQGA 393
|
250 260
....*....|....*....|..
gi 1046907584 760 YFLEDALQ---LRYLDISSNKI 778
Cdd:COG5238 394 EALIDALQtnrLHTLILDGNLI 415
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
71-277 |
3.34e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 51.24 E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 71 DKHLTEIPEGIPTNTTNLTLTINHIPSIsPDsfHRLKHLEELDLRCNCVPILlgskanvctkrlqirPGSFSglSDLKSL 150
Cdd:PRK15370 229 SNQLTSIPATLPDTIQEMELSINRITEL-PE--RLPSALQSLDLFHNKISCL---------------PENLP--EELRYL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 151 YLDGNQLLEIPQDLPSSLQLLSLEaNNIFSITKENLSelVNIESLYLGQNCYYRNPCNVSysiekdaflvmKNLKVLSLK 230
Cdd:PRK15370 289 SVYDNSIRTLPAHLPSGITHLNVQ-SNSLTALPETLP--PGLKTLEAGENALTSLPASLP-----------PELQVLDVS 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1046907584 231 DNNVTAVPTILPPNLLELYLYNNIIKRIQEhdfNKLSQLQVLDLSGN 277
Cdd:PRK15370 355 KNQITVLPETLPPTITTLDVSRNALTNLPE---NLPAALQIMQASRN 398
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
639-706 |
3.65e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.21 E-value: 3.65e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046907584 639 SLRVLEFRGNHLDVLwRDGdnryldFFKNLLNLEELDISRNSLNSVPPGVFEGMpPNLTTLSLAKNGL 706
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-DDG------AFKGLSNLKVLDLSNNLLTTLSPGAFSGL-PSLRYLDLSGNRL 61
|
|
| LRR_12 |
pfam18837 |
Leucine-rich repeat; This Pfam entry includes some LRRs that fail to be detected with the ... |
417-446 |
4.30e-06 |
|
Leucine-rich repeat; This Pfam entry includes some LRRs that fail to be detected with the pfam00560 model. This entry represents one repeat unit.
Pssm-ID: 408607 Cd Length: 30 Bit Score: 44.26 E-value: 4.30e-06
10 20 30
....*....|....*....|....*....|
gi 1046907584 417 LEVLDLGTNFIKIADLNIFQQFENLKFIDL 446
Cdd:pfam18837 1 LQTLHLQMNFINQAQLSIFGAFPGLRFVDL 30
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
516-776 |
7.89e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 49.28 E-value: 7.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 516 TLDLSRNNIFFIKP---SDFKHLSFLKCLNLSGNAIGQT---LNGSELQPLRE-LRYLDFSNNRL------DLlySTAFE 582
Cdd:cd00116 85 ELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLGDRglrLLAKGLKDLPPaLEKLVLGRNRLegasceAL--AKALR 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 583 ELQNLEILDLSSNShyFQAEGITHMLNFTKKLRHLEKLMMNDNDIStsasrtmeseslrvlefrgnhldvlwRDGDNRYL 662
Cdd:cd00116 163 ANRDLKELNLANNG--IGDAGIRALAEGLKANCNLEVLDLNNNGLT--------------------------DEGASALA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 663 DFFKNLLNLEELDISRNSLNSVppgvfegmppnlttlslaknGLRSFSWGRLQLLKHLKNLDLSHNQLTTVPAR-----L 737
Cdd:cd00116 215 ETLASLKSLEVLNLGDNNLTDA--------------------GAAALASALLSPNISLLTLSLSCNDITDDGAKdlaevL 274
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1046907584 738 ANcSKSLTKLILNHNQIRQLTKYFLEDAL-----QLRYLDISSN 776
Cdd:cd00116 275 AE-KESLLELDLRGNKFGEEGAQLLAESLlepgnELESLWVKDD 317
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
515-757 |
1.77e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.08 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 515 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRLDLLYSTAFeeLQNLEILDLSS 594
Cdd:PLN00113 72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS--IPNLETLDLSN 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 595 N---SHYFQAEG---------------ITHMLNFTKKLRHLEKLMMNDNDISTSASR---TMESESLRVLEFRG------ 647
Cdd:PLN00113 150 NmlsGEIPNDIGsfsslkvldlggnvlVGKIPNSLTNLTSLEFLTLASNQLVGQIPRelgQMKSLKWIYLGYNNlsgeip 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 648 ---------NHLDVLWRDGDNRYLDFFKNLLNLEELDISRNSLN-SVPPGVFEgmPPNLTTLSLAKNglrSFSWGRLQLL 717
Cdd:PLN00113 230 yeiggltslNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFS--LQKLISLDLSDN---SLSGEIPELV 304
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1046907584 718 KHLKNLDLSH---NQLT-TVPARLAncskSLTKLilnhnQIRQL 757
Cdd:PLN00113 305 IQLQNLEILHlfsNNFTgKIPVALT----SLPRL-----QVLQL 339
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
223-277 |
2.18e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.90 E-value: 2.18e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1046907584 223 NLKVLSLKDNNVTAVPTIL---PPNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGN 277
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAfkgLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
585-778 |
2.87e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 47.86 E-value: 2.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 585 QNLEILDLSSNshYFQAEGITHMLNFTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFRGNHLdvlwrdGDN 659
Cdd:COG5238 180 NSVETVYLGCN--QIGDEGIEELAEALTQNTTVTTLWLKRNPIGDEGAEILaealkGNKSLTTLDLSNNQI------GDE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 660 RYLDFFKNLLN---LEELDISRNSLNSvppgvfEGMppnlttLSLAKNglrsfswgrLQLLKHLKNLDLSHNQLTTVPAR 736
Cdd:COG5238 252 GVIALAEALKNnttVETLYLSGNQIGA------EGA------IALAKA---------LQGNTTLTSLDLSVNRIGDEGAI 310
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1046907584 737 -LANC---SKSLTKLILNHNQIRQLTKYFLEDALQ----LRYLDISSNKI 778
Cdd:COG5238 311 aLAEGlqgNKTLHTLNLAYNGIGAQGAIALAKALQenttLHSLDLSDNQI 360
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
719-778 |
6.87e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.74 E-value: 6.87e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 719 HLKNLDLSHNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKI 778
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
623-781 |
2.26e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 44.92 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 623 NDNDISTSASRTMESESLRVLEFRGNHLDVLWRDGDNRYLDFFKNLLNLEELDISRNSLNSVPPGVFEGMPPNLTTLSLA 702
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 703 KNGLRSFSWGRLQLLKHLKNL-----------------DLSHNQLTTVPARLANCsKSLTKLILNHNQIRQLTKyFLEDA 765
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELdlsgneelsnltnleslDLSGNQLTDLPEELANL-TNLKELDLSNNQLTDLPE-PLGNL 158
|
170
....*....|....*.
gi 1046907584 766 LQLRYLDISSNKIQVI 781
Cdd:COG4886 159 TNLKSLDLSNNQLTDL 174
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
694-783 |
3.96e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.85 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 694 PNLTTLSLAKNGLRSFSwgRLQLLKHLKNLDLSHNQLTTV----------------------------PARLANCSKSLT 745
Cdd:cd21340 46 TNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVVeglenltnleelhienqrlppgekltfdPRSLAALSNSLR 123
|
90 100 110
....*....|....*....|....*....|....*...
gi 1046907584 746 KLILNHNQIRQLTkyFLEDALQLRYLDISSNKIQVIQK 783
Cdd:cd21340 124 VLNISGNNIDSLE--PLAPLRNLEQLDASNNQISDLEE 159
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
243-320 |
4.77e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.43 E-value: 4.77e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046907584 243 PNLLELYLYNNIIKRIQEHDFNKLSQLQVLDLSGNCPRCynvpypctpcennsplqIHDNAFDSLTELKVLRLHSNSL 320
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT-----------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
223-472 |
6.46e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 43.11 E-value: 6.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 223 NLKVLSLKDNNVT-----AVPTILPPN--LLELYLYNNIIKRIQE------HDFNKLSQLQVLDLSgncpRCYNVPYPCT 289
Cdd:cd00116 24 CLQVLRLEGNTLGeeaakALASALRPQpsLKELCLSLNETGRIPRglqsllQGLTKGCGLQELDLS----DNALGPDGCG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 290 PCEnnsplqihdnAFDSLTELKVLRLHSNSL-----QHVPAEWFKNMSNLQELDLSQNYLAREIEE--AKFLNSLPNLVQ 362
Cdd:cd00116 100 VLE----------SLLRSSSLQELKLNNNGLgdrglRLLAKGLKDLPPALEKLVLGRNRLEGASCEalAKALRANRDLKE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 363 LDLSFNyelQVYHASI-TLPHSLSSLTKLKNLYIKGYVFKELKDSSLS-VLHNLSNLEVLDLGTNFIKIADLNIF----- 435
Cdd:cd00116 170 LNLANN---GIGDAGIrALAEGLKANCNLEVLDLNNNGLTDEGASALAeTLASLKSLEVLNLGDNNLTDAGAAALasall 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046907584 436 ----------------------------QQFENLKFIDLSVNKIS--PSEESREVGLCPNAQTSVDW 472
Cdd:cd00116 247 spnislltlslscnditddgakdlaevlAEKESLLELDLRGNKFGeeGAQLLAESLLEPGNELESLW 313
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
141-277 |
6.49e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.47 E-value: 6.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 141 FSGLSDLKSLYLDGNQLLEIpqdlpsslqllsleannifsitkENLSELVNIESLYLGQNC------------------- 201
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKI-----------------------ENLENLVNLKKLYLGGNRisvveglenltnleelhie 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 202 YYRNPCNVSYSIEKDA-FLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQE--HDFNKLSQLQVLDLSGN 277
Cdd:cd21340 99 NQRLPPGEKLTFDPRSlAALSNSLRVLNISGNNIDSLEPLAPlRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
378-595 |
6.55e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.47 E-value: 6.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 378 ITLPHSLSSLTKLKNLYikgyvfkeLKD---SSLSVLHNLSNLEVLDLGTNFI-KIADLNifqQFENLKFIDLSVNKISP 453
Cdd:cd21340 14 ITKIDNLSLCKNLKVLY--------LYDnkiTKIENLEFLTNLTHLYLQNNQIeKIENLE---NLVNLKKLYLGGNRISV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 454 SEesrevGLcpnaqtsvdwHGPQVLEALHYfrydEYARscrfknkepptfLPLnadchtyGKTLDLSRNNIFFIKPSdfk 533
Cdd:cd21340 83 VE-----GL----------ENLTNLEELHI----ENQR------------LPP-------GEKLTFDPRSLAALSNS--- 121
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046907584 534 hlsfLKCLNLSGNAIgQTLngSELQPLRELRYLDFSNNRLDLL--YSTAFEELQNLEILDLSSN 595
Cdd:cd21340 122 ----LRVLNISGNNI-DSL--EPLAPLRNLEQLDASNNQISDLeeLLDLLSSWPSLRELDLTGN 178
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
287-397 |
1.77e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 42.11 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046907584 287 PCTPCENnsPLQIHDNAFDSLTE---LKVLRLHSNSLQ-HVPAEWFKnMSNLQELDLSQNYLAREIEEAkfLNSLPNLVQ 362
Cdd:PLN03150 396 PCVPQQH--PWSGADCQFDSTKGkwfIDGLGLDNQGLRgFIPNDISK-LRHLQSINLSGNSIRGNIPPS--LGSITSLEV 470
|
90 100 110
....*....|....*....|....*....|....*
gi 1046907584 363 LDLSFNYelqvYHASItlPHSLSSLTKLKNLYIKG 397
Cdd:PLN03150 471 LDLSYNS----FNGSI--PESLGQLTSLRILNLNG 499
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
529-596 |
7.55e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.18 E-value: 7.55e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046907584 529 PSDFKHLSFLKCLNLSGNAIGQTLNGSeLQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNS 596
Cdd:PLN03150 435 PNDISKLRHLQSINLSGNSIRGNIPPS-LGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
561-627 |
8.36e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 8.36e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046907584 561 RELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNShyfqaegITHMLNFT-KKLRHLEKLMMNDNDI 627
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNL-------LTTLSPGAfSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
743-786 |
9.79e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 9.79e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 1046907584 743 SLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKTSF 786
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAF 45
|
|
| |
