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Conserved domains on  [gi|1046873375|ref|XP_017446516|]
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dnaJ homolog subfamily C member 5B isoform X1 [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 10446266)

J domain-containing protein containing a similar domain as DnaJ, a protein that plays crucial roles in protein translation, folding, unfolding, translocation, and degradation, primarily by stimulating the ATPase activity of Hsp70.

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  35729039|9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 19-81 2.33e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 111.03  E-value: 2.33e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  19 SLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYD 81
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 19-81 2.33e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 111.03  E-value: 2.33e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  19 SLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYD 81
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 21-84 3.25e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 119.09  E-value: 3.25e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK10767    7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 21-93 1.36e-29

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 106.71  E-value: 1.36e-29
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVAEQ 93
Cdd:COG0484     3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLAT 75
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 21-88 1.25e-28

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 109.23  E-value: 1.25e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPdDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 21-73 2.37e-25

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 92.99  E-value: 2.37e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTD 73
Cdd:cd06257     3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
18-76 3.93e-23

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 87.29  E-value: 3.93e-23
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375   18 ESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPS-AAEKFKEINNAHTILTDNSK 76
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEeAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
21-88 1.73e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 85.26  E-value: 1.73e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:NF037946    8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV 74
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 19-81 2.33e-32

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 111.03  E-value: 2.33e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  19 SLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYD 81
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 21-84 3.25e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 119.09  E-value: 3.25e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK10767    7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYG 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 21-93 1.36e-29

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 106.71  E-value: 1.36e-29
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVAEQ 93
Cdd:COG0484     3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLAT 75
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 21-88 1.25e-28

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 109.23  E-value: 1.25e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPdDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 13-96 7.41e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 104.93  E-value: 7.41e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375  13 MSTSgESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL---Y 89
Cdd:PRK14298    1 MATT-RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKN-KEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIdnqY 78

                          90
                  ....*....|...
gi 1046873375  90 VAE------QFGD 96
Cdd:PRK14298   79 SAEdifrgaDFGG 91
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 21-88 1.95e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 103.69  E-value: 1.95e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:PRK14294    7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL 74
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 21-77 6.89e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 94.68  E-value: 6.89e-26
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKR 77
Cdd:COG5407     3 YEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKR 59
PRK14297 PRK14297
molecular chaperone DnaJ;
21-85 8.65e-26

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 102.17  E-value: 8.65e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGS 85
Cdd:PRK14297    7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGT 71
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 21-73 2.37e-25

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 92.99  E-value: 2.37e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTD 73
Cdd:cd06257     3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 21-103 5.32e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 99.84  E-value: 5.32e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPdDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVA-EQFGDENV 99
Cdd:PRK14291    6 YEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSgQQQQGQEG 84


                  ....
gi 1046873375 100 NTYF 103
Cdd:PRK14291   85 FSDF 88
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 21-88 1.28e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 99.11  E-value: 1.28e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:PRK14281    6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 21-89 1.50e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 98.76  E-value: 1.50e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLY 89
Cdd:PRK14284    4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPF 72
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 20-84 3.98e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 97.56  E-value: 3.98e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046873375  20 LYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK14277    7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFG 71
DnaJ smart00271
DnaJ molecular chaperone homology domain;
18-76 3.93e-23

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 87.29  E-value: 3.93e-23
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375   18 ESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPS-AAEKFKEINNAHTILTDNSK 76
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEeAEEKFKEINEAYEVLSDPEK 60
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 21-88 6.28e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 94.04  E-value: 6.28e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:PRK14301    7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV 74
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 18-96 1.06e-22

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 94.12  E-value: 1.06e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1046873375  18 ESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDdpsaAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVAEQFGD 96
Cdd:PTZ00037   28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPAD 102
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 21-85 2.00e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 91.54  E-value: 2.00e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGS 85
Cdd:PRK14299    7 YAILGVPKNASQDEIKKAFKKLARKYHPDVN-KSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGT 70
PRK14289 PRK14289
molecular chaperone DnaJ;
21-95 2.19e-22

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 92.97  E-value: 2.19e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVAEQFG 95
Cdd:PRK14289    8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG 82
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 21-100 6.21e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 91.42  E-value: 6.21e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL--YVAEQFGdEN 98
Cdd:PRK14283    8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMdgFSQEDIF-NN 85


                  ..
gi 1046873375  99 VN 100
Cdd:PRK14283   86 IN 87
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 16-88 8.18e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 91.20  E-value: 8.18e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046873375  16 SGESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:PRK14286    2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 21-85 1.69e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 90.33  E-value: 1.69e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPdDPSAAEKFKEINNAHTILTDNSKRNIYDKYGS 85
Cdd:PRK14292    5 YELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGT 68
PRK14280 PRK14280
molecular chaperone DnaJ;
21-87 3.02e-21

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 89.78  E-value: 3.02e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLG 87
Cdd:PRK14280    7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDIN-KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 18-87 4.59e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 88.99  E-value: 4.59e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375  18 ESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLG 87
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN-KEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 21-81 5.43e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 88.96  E-value: 5.43e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPdDPSAAEKFKEINNAHTILTDNSKRNIYD 81
Cdd:PRK14278    6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVD 65
PRK14279 PRK14279
molecular chaperone DnaJ;
21-86 2.79e-20

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 87.10  E-value: 2.79e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSL 86
Cdd:PRK14279   12 YKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRL 77
PRK14293 PRK14293
molecular chaperone DnaJ;
21-96 2.84e-20

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 86.97  E-value: 2.84e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVAEQFGD 96
Cdd:PRK14293    6 YEILGVSRDADKDELKRAYRRLARKYHPDVN-KEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPD 80
PRK14295 PRK14295
molecular chaperone DnaJ;
21-86 3.99e-20

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 86.83  E-value: 3.99e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSL 86
Cdd:PRK14295   12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSL 77
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 21-84 1.00e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 85.43  E-value: 1.00e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK14285    6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFG 69
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
21-88 1.73e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 85.26  E-value: 1.73e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGL 88
Cdd:NF037946    8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGV 74
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
18-81 5.66e-19

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 77.45  E-value: 5.66e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046873375  18 ESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPS-AAEKFKEINNAHTILTDNSKRNIYD 81
Cdd:COG2214     5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKAlAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 21-93 1.58e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 82.15  E-value: 1.58e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAE-KFKEINNAHTILTDNSKRNIYDKYGslglYVAEQ 93
Cdd:PRK14282    7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEqKFKEIQEAYEVLSDPQKRAMYDRFG----YVGEQ 76
PRK14288 PRK14288
molecular chaperone DnaJ;
19-103 5.12e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 80.50  E-value: 5.12e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375  19 SLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLYVA----EQF 94
Cdd:PRK14288    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAgasqSDF 83

                          90
                  ....*....|.
gi 1046873375  95 GD--ENVNTYF 103
Cdd:PRK14288   84 SDffEDLGSFF 94
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 21-85 1.19e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 76.89  E-value: 1.19e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDD-PSAAEKFKEINNAHTILTDNSKRNIYDKYGS 85
Cdd:PRK14290    6 YKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNkAEAEEKFKEISEAYEVLSDPQKRRQYDQTGT 71
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 16-84 8.67e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 74.28  E-value: 8.67e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1046873375  16 SGESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK14287    2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN-KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 21-84 1.91e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 73.44  E-value: 1.91e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK14296    7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDLN-KSPDAHDKMVEINEAADVLLDKDKRKQYDQFG 69
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 18-84 8.01e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 71.58  E-value: 8.01e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046873375  18 ESLYEILGLHKGASCEEIKKTYRKLALRHHPDkNPDDPSAAEKFKEINNAHTILTDNSKRNIYDKYG 84
Cdd:PRK14300    3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK10266 PRK10266
curved DNA-binding protein;
21-82 3.76e-10

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 57.91  E-value: 3.76e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNpDDPSAAEKFKEINNAHTILTDNSKRNIYDK 82
Cdd:PRK10266    7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDVS-KEPDAEARFKEVAEAWEVLSDEQRRAEYDQ 67
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
21-73 1.20e-09

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 52.49  E-value: 1.20e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1046873375  21 YEILGLHKGASCEEIKKTYRKLALRHHPDK--NPDDPS----AAEKFKEINNAHTILTD 73
Cdd:COG1076     7 FELLGLPPDADDAELKRAYRKLQREHHPDRlaAGLPEEeqrlALQKAAAINEAYETLKD 65
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 21-107 2.54e-09

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 55.95  E-value: 2.54e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375   21 YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDpSAAEKFKEINNAHTILTDNSKRNIYDKYGSLGLyvaEQFGDENVN 100
Cdd:PTZ00341   576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGI---KGVNFIHPS 651


                   ....*..
gi 1046873375  101 TYFMLSS 107
Cdd:PTZ00341   652 IFYLLAS 658
djlA PRK09430
co-chaperone DjlA;
7-50 1.30e-07

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 50.20  E-value: 1.30e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1046873375   7 NQRQRAMSTSGESL---YEILGLHKGASCEEIKKTYRKLALRHHPDK 50
Cdd:PRK09430  186 GGGGYQQAQRGPTLedaYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 20-81 3.62e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 43.48  E-value: 3.62e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046873375  20 LYEILGLHK---GASCEEIKKTYRKLALRHHPDKNPDDPSAA--EKFKEINNAHTILTDNSKRNIYD 81
Cdd:COG5269    45 LYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGcdEFFKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
 20-104 2.91e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 36.57  E-value: 2.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046873375  20 LYEILGLHKGA--SCEEIKKTYRKLALRHHPDKNPDDpsaaEKFKEIN-----------NAHTIL--TDNSKRNIYDKYG 84
Cdd:PHA03102    7 LMDLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDE----EKMKELNtlykkfresvkSLRDLDgeEDSSSEEEDVPSG 82

                          90       100
                  ....*....|....*....|
gi 1046873375  85 SLGLYvaeqFGDEnVNTYFM 104
Cdd:PHA03102   83 YVGAT----FGDR-VNALYC 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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