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Conserved domains on  [gi|1039743937|ref|XP_017171051|]
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GMP reductase 1 isoform X3 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GMP_reduct_1 super family cl31092
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP ...
1-290 0e+00

guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


The actual alignment was detected with superfamily member TIGR01305:

Pssm-ID: 130372  Cd Length: 343  Bit Score: 573.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFA-ETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:TIGR01305  53 MDTVGTFEMAAALSQHSIFTAIHKHYSVDEWKAFAtNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:TIGR01305 133 YSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLK 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 239
Cdd:TIGR01305 213 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFAGHTESGGEVIERNGRKFKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 292
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVF 290
Cdd:TIGR01305 293 EVPYRGDVENTILDILGGLRSACTYVGAAKLKELSKRATFIRVTQQHNTVF 343
 
Name Accession Description Interval E-value
GMP_reduct_1 TIGR01305
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP ...
1-290 0e+00

guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 130372  Cd Length: 343  Bit Score: 573.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFA-ETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:TIGR01305  53 MDTVGTFEMAAALSQHSIFTAIHKHYSVDEWKAFAtNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:TIGR01305 133 YSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLK 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 239
Cdd:TIGR01305 213 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFAGHTESGGEVIERNGRKFKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 292
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVF 290
Cdd:TIGR01305 293 EVPYRGDVENTILDILGGLRSACTYVGAAKLKELSKRATFIRVTQQHNTVF 343
PRK05096 PRK05096
guanosine 5'-monophosphate oxidoreductase; Provisional
1-291 0e+00

guanosine 5'-monophosphate oxidoreductase; Provisional


Pssm-ID: 235343 [Multi-domain]  Cd Length: 346  Bit Score: 569.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFAETHP-ECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:PRK05096   54 MDTVGTFEMAKALASFDILTAVHKHYSVEEWAAFVNNSSaDVLKHVMVSTGTSDADFEKTKQILALSPALNFICIDVANG 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:PRK05096  134 YSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLG 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 239
Cdd:PRK05096  214 GQIVSDGGCTVPGDVAKAFGGGADFVMLGGMLAGHEESGGEIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTV 293
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFG 291
Cdd:PRK05096  294 KLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRVFN 345
IMPDH cd00381
IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the ...
1-282 9.61e-113

IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.


Pssm-ID: 238223 [Multi-domain]  Cd Length: 325  Bit Score: 328.32  E-value: 9.61e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFAETHPECLQhVAVSSGSGQNDLERMSRILEAVPQVkfICLDVANGY 80
Cdd:cd00381    42 MDTVTESEMAIAMARLGGIGVIHRNMSIEEQAEEVRKVKGRLL-VGAAVGTREDDKERAEALVEAGVDV--IVIDSAHGH 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  81 SEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKG 160
Cdd:cd00381   119 SVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARDLIDAGADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGV 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 161 HIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAG-----GVAEYRASE 235
Cdd:cd00381   199 PVIADGGIRTSGDIVKALAAGADAVMLGSLLAGTDESPGEYIEINGKRYKEYRGMGSLGAMKKGGGdryfgEEAKKLVPE 278
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1039743937 236 GKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRV 282
Cdd:cd00381   279 GVEGIVPYKGSVKDVLPQLVGGLRSSMGYCGAKSLKELQEKARFVRI 325
GuaB COG0516
IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP ...
1-283 7.73e-83

IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP reductase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440282 [Multi-domain]  Cd Length: 326  Bit Score: 252.44  E-value: 7.73e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDW-KCFAETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:COG0516    41 ALVVTTVIEKLLLVTVAGETALLALALLLLKkKKFLLLVDDDGLLLLVLVGVKDDDKEKARALAAADAGVDVLVIDAAHG 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHfvEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:COG0516   121 HSGG--DAMKKIKLTFDDVLLIPGNSATVEPARALVDAGADLTKVGIGPGSICTTRVVIGLGIPQLSAAMDTVTEARMAI 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 gHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDtamkkhaggvAEYRASEGKTV 239
Cdd:COG0516   199 -AIAADGGIGYIHDNAKALAAGADAVMLGSLFAGTEEQPGEVILYQGRSVKRYRGMGSD----------AKKLVPEGIEG 267
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVT 283
Cdd:COG0516   268 RVPYKGPLEDTLHQLLGGLRSGMGYCGARTIEELREKARFVRIT 311
IMPDH pfam00478
IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine ...
45-284 2.97e-79

IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.


Pssm-ID: 459826 [Multi-domain]  Cd Length: 463  Bit Score: 247.30  E-value: 2.97e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  45 VAVSSGSGQNDLERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKV 124
Cdd:pfam00478 211 VGAAVGVGDDTLERAEALVEA--GVDVLVVDTAHGHSKGVIDTVKWIKKKYPDVQVIAGNVATAEGAKALIEAGADAVKV 288
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 125 GVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIER 204
Cdd:pfam00478 289 GIGPGSICTTRVVAGVGVPQLTAIYDVAEAAKKYGVPVIADGGIKYSGDIVKALAAGADAVMLGSLLAGTDESPGEVILY 368
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 205 NGQKLKLFYGMSSDTAMKKHA------GGVAEYRASEGktVE--VPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRR 276
Cdd:pfam00478 369 QGRRYKSYRGMGSLGAMKKGSkdryfqEDDDKKLVPEG--VEgrVPYKGPLSDVVYQLVGGLRSGMGYCGAKTIEELREK 446

                  ....*...
gi 1039743937 277 ATFIRVTQ 284
Cdd:pfam00478 447 ARFVRITA 454
 
Name Accession Description Interval E-value
GMP_reduct_1 TIGR01305
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP ...
1-290 0e+00

guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 130372  Cd Length: 343  Bit Score: 573.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFA-ETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:TIGR01305  53 MDTVGTFEMAAALSQHSIFTAIHKHYSVDEWKAFAtNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:TIGR01305 133 YSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLK 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 239
Cdd:TIGR01305 213 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFAGHTESGGEVIERNGRKFKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 292
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVF 290
Cdd:TIGR01305 293 EVPYRGDVENTILDILGGLRSACTYVGAAKLKELSKRATFIRVTQQHNTVF 343
PRK05096 PRK05096
guanosine 5'-monophosphate oxidoreductase; Provisional
1-291 0e+00

guanosine 5'-monophosphate oxidoreductase; Provisional


Pssm-ID: 235343 [Multi-domain]  Cd Length: 346  Bit Score: 569.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFAETHP-ECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:PRK05096   54 MDTVGTFEMAKALASFDILTAVHKHYSVEEWAAFVNNSSaDVLKHVMVSTGTSDADFEKTKQILALSPALNFICIDVANG 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:PRK05096  134 YSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLG 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 GHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGGVAEYRASEGKTV 239
Cdd:PRK05096  214 GQIVSDGGCTVPGDVAKAFGGGADFVMLGGMLAGHEESGGEIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTV 293
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFG 291
Cdd:PRK05096  294 KLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRVFN 345
IMPDH cd00381
IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the ...
1-282 9.61e-113

IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.


Pssm-ID: 238223 [Multi-domain]  Cd Length: 325  Bit Score: 328.32  E-value: 9.61e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFAETHPECLQhVAVSSGSGQNDLERMSRILEAVPQVkfICLDVANGY 80
Cdd:cd00381    42 MDTVTESEMAIAMARLGGIGVIHRNMSIEEQAEEVRKVKGRLL-VGAAVGTREDDKERAEALVEAGVDV--IVIDSAHGH 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  81 SEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKG 160
Cdd:cd00381   119 SVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARDLIDAGADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGV 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 161 HIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAG-----GVAEYRASE 235
Cdd:cd00381   199 PVIADGGIRTSGDIVKALAAGADAVMLGSLLAGTDESPGEYIEINGKRYKEYRGMGSLGAMKKGGGdryfgEEAKKLVPE 278
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1039743937 236 GKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRV 282
Cdd:cd00381   279 GVEGIVPYKGSVKDVLPQLVGGLRSSMGYCGAKSLKELQEKARFVRI 325
GuaB COG0516
IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP ...
1-283 7.73e-83

IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP reductase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440282 [Multi-domain]  Cd Length: 326  Bit Score: 252.44  E-value: 7.73e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKHYSLDDW-KCFAETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANG 79
Cdd:COG0516    41 ALVVTTVIEKLLLVTVAGETALLALALLLLKkKKFLLLVDDDGLLLLVLVGVKDDDKEKARALAAADAGVDVLVIDAAHG 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  80 YSEHfvEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLK 159
Cdd:COG0516   121 HSGG--DAMKKIKLTFDDVLLIPGNSATVEPARALVDAGADLTKVGIGPGSICTTRVVIGLGIPQLSAAMDTVTEARMAI 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 160 gHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDtamkkhaggvAEYRASEGKTV 239
Cdd:COG0516   199 -AIAADGGIGYIHDNAKALAAGADAVMLGSLFAGTEEQPGEVILYQGRSVKRYRGMGSD----------AKKLVPEGIEG 267
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1039743937 240 EVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVT 283
Cdd:COG0516   268 RVPYKGPLEDTLHQLLGGLRSGMGYCGARTIEELREKARFVRIT 311
IMPDH pfam00478
IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine ...
45-284 2.97e-79

IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.


Pssm-ID: 459826 [Multi-domain]  Cd Length: 463  Bit Score: 247.30  E-value: 2.97e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  45 VAVSSGSGQNDLERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKV 124
Cdd:pfam00478 211 VGAAVGVGDDTLERAEALVEA--GVDVLVVDTAHGHSKGVIDTVKWIKKKYPDVQVIAGNVATAEGAKALIEAGADAVKV 288
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 125 GVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIER 204
Cdd:pfam00478 289 GIGPGSICTTRVVAGVGVPQLTAIYDVAEAAKKYGVPVIADGGIKYSGDIVKALAAGADAVMLGSLLAGTDESPGEVILY 368
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 205 NGQKLKLFYGMSSDTAMKKHA------GGVAEYRASEGktVE--VPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRR 276
Cdd:pfam00478 369 QGRRYKSYRGMGSLGAMKKGSkdryfqEDDDKKLVPEG--VEgrVPYKGPLSDVVYQLVGGLRSGMGYCGAKTIEELREK 446

                  ....*...
gi 1039743937 277 ATFIRVTQ 284
Cdd:pfam00478 447 ARFVRITA 454
IMP_dehydrog TIGR01302
inosine-5'-monophosphate dehydrogenase; This model describes IMP dehydrogenase, an enzyme of ...
45-273 1.09e-63

inosine-5'-monophosphate dehydrogenase; This model describes IMP dehydrogenase, an enzyme of GMP biosynthesis. This form contains two CBS domains. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273546 [Multi-domain]  Cd Length: 450  Bit Score: 206.81  E-value: 1.09e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  45 VAVSSGSGQNDLERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKV 124
Cdd:TIGR01302 215 VGAAVGTREFDKERAEALVKA--GVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAGADGLRV 292
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 125 GVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIER 204
Cdd:TIGR01302 293 GIGPGSICTTRIVAGVGVPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVMLGSLLAGTTESPGEYEII 372
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039743937 205 NGQKLKLFYGMSSDTAMKK-------HAGGVAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKEL 273
Cdd:TIGR01302 373 NGRRYKQYRGMGSLGAMTKgssdrylQDENKTKKFVPEGVEGAVPYKGSVLELLPQLVGGLKSGMGYVGARSIDEL 448
PTZ00314 PTZ00314
inosine-5'-monophosphate dehydrogenase; Provisional
45-285 6.28e-60

inosine-5'-monophosphate dehydrogenase; Provisional


Pssm-ID: 240355 [Multi-domain]  Cd Length: 495  Bit Score: 198.27  E-value: 6.28e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  45 VAVSSGSGQNDLERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKV 124
Cdd:PTZ00314  232 VGAAISTRPEDIERAAALIEA--GVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGADGLRI 309
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 125 GVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIER 204
Cdd:PTZ00314  310 GMGSGSICITQEVCAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVMLGSLLAGTEEAPGEYFFK 389
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 205 NGQKLKLFYGMSSDTAMKKHAGG------VAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKEL----- 273
Cdd:PTZ00314  390 DGVRLKVYRGMGSLEAMLSKESGeryldeNETIKVAQGVSGSVVDKGSVAKLIPYLVKGVKHGMQYIGAHSIPELhekly 469
                         250
                  ....*....|..
gi 1039743937 274 SRRATFIRVTQQ 285
Cdd:PTZ00314  470 SGQVRFERRSGS 481
PRK07807 PRK07807
GuaB1 family IMP dehydrogenase-related protein;
57-277 1.09e-55

GuaB1 family IMP dehydrogenase-related protein;


Pssm-ID: 181127 [Multi-domain]  Cd Length: 479  Bit Score: 186.65  E-value: 1.09e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  57 ERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRT 136
Cdd:PRK07807  230 AKARALLEA--GVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAGADIVKVGVGPGAMCTTRM 307
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 137 KTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEV-IERNGQKLKLFYGM 215
Cdd:PRK07807  308 MTGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVMIGSWFAGTYESPGDLmRDRDGRPYKESFGM 387
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039743937 216 SSDTAMKKHAGGVAEY-RA---------SEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRA 277
Cdd:PRK07807  388 ASARAVAARTAGDSAFdRArkalfeegiSTSRMYLDPGRPGVEDLLDHITSGVRSSCTYAGARTLAEFHERA 459
PRK06843 PRK06843
inosine 5-monophosphate dehydrogenase; Validated
55-284 3.30e-54

inosine 5-monophosphate dehydrogenase; Validated


Pssm-ID: 180725 [Multi-domain]  Cd Length: 404  Bit Score: 181.01  E-value: 3.30e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  55 DLERMSRILEAV-PQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCT 133
Cdd:PRK06843  151 DIDTIERVEELVkAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICT 230
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 134 TRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFY 213
Cdd:PRK06843  231 TRIVAGVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYV 310
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 214 GMSSDTAMKKhaGGVAEY----------RASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVT 283
Cdd:PRK06843  311 GMGSISAMKR--GSKSRYfqlennepkkLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKIS 388

                  .
gi 1039743937 284 Q 284
Cdd:PRK06843  389 H 389
IMP_DH_rel_1 TIGR01303
IMP dehydrogenase family protein; This model represents a family of proteins, often annotated ...
69-278 8.68e-54

IMP dehydrogenase family protein; This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302. [Unknown function, General]


Pssm-ID: 130370 [Multi-domain]  Cd Length: 475  Bit Score: 181.65  E-value: 8.68e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  69 VKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAV 148
Cdd:TIGR01303 238 VDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVRDLLEAGANIIKVGVGPGAMCTTRMMTGVGRPQFSAV 317
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 149 IECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVI-ERNGQKLKLFYGMSSDTAMKKHAGG 227
Cdd:TIGR01303 318 LECAAEARKLGGHVWADGGVRHPRDVALALAAGASNVMVGSWFAGTYESPGDLMrDRDGRPYKESFGMASKRAVVARTGA 397
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039743937 228 VAEY-RA---------SEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRAT 278
Cdd:TIGR01303 398 DNAFdRArkalfeegiSTSRMGLDPDRGGVEDLIDHIISGVRSSCTYAGASSLEEFHERAV 458
PRK05458 PRK05458
guanosine 5'-monophosphate oxidoreductase; Provisional
1-275 3.17e-49

guanosine 5'-monophosphate oxidoreductase; Provisional


Pssm-ID: 235479 [Multi-domain]  Cd Length: 326  Bit Score: 165.90  E-value: 3.17e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937   1 MDTVGTFEMAVVMSQHAMFTAVHKhYSLDDWKCFAETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANGY 80
Cdd:PRK05458   45 MQTIIDEKIAEWLAENGYFYIMHR-FDPEARIPFIKDMHEQGLIASISVGVKDDEYDFVDQLAAEGLTPEYITIDIAHGH 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  81 SEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYP--QLSAVIECADSAhgl 158
Cdd:PRK05458  124 SDSVINMIQHIKKHLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGgwQLAALRWCAKAA--- 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 159 KGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDtaMKKhaggvAEYRASEGKT 238
Cdd:PRK05458  201 RKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESPGKTVEIDGKLYKEYFGSASE--FQK-----GEYKNVEGKK 273
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1039743937 239 VEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSR 275
Cdd:PRK05458  274 ILVPHKGSLKDTLTEMEQDLQSSISYAGGRDLDAIRK 310
PLN02274 PLN02274
inosine-5'-monophosphate dehydrogenase
45-223 9.26e-33

inosine-5'-monophosphate dehydrogenase


Pssm-ID: 215154 [Multi-domain]  Cd Length: 505  Bit Score: 125.55  E-value: 9.26e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  45 VAVSSGSGQNDLERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKV 124
Cdd:PLN02274  239 VGAAIGTRESDKERLEHLVKA--GVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAGVDGLRV 316
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 125 GVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIER 204
Cdd:PLN02274  317 GMGSGSICTTQEVCAVGRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVMMGSFLAGTTEAPGEYFYQ 396
                         170
                  ....*....|....*....
gi 1039743937 205 NGQKLKLFYGMSSDTAMKK 223
Cdd:PLN02274  397 DGVRVKKYRGMGSLEAMTK 415
PRK07107 PRK07107
IMP dehydrogenase;
50-283 2.87e-31

IMP dehydrogenase;


Pssm-ID: 180842 [Multi-domain]  Cd Length: 502  Bit Score: 121.73  E-value: 2.87e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  50 GSGQND---LERMSRILEAvpQVKFICLDVANGYSEHFVEFVKLVRSKFPEHT-IMAGNVVTGEMVEELILSGADIIKVG 125
Cdd:PRK07107  235 GAGINTrdyAERVPALVEA--GADVLCIDSSEGYSEWQKRTLDWIREKYGDSVkVGAGNVVDREGFRYLAEAGADFVKVG 312
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 126 VGPGSVCTTRTKTGVGYPQLSAVIECADS------AHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAG 199
Cdd:PRK07107  313 IGGGSICITREQKGIGRGQATALIEVAKArdeyfeETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFARFDESPT 392
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937 200 EVIERNGQKLKLFYGMSSDTA---MKKHAGGVAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRR 276
Cdd:PRK07107  393 NKVNINGNYMKEYWGEGSNRArnwQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAITLSKVRSTMCNCGALSIPELQQK 472

                  ....*..
gi 1039743937 277 ATFIRVT 283
Cdd:PRK07107  473 AKITLVS 479
KDPG_aldolase cd00452
KDPG and KHG aldolase; KDPG and KHG aldolase. This family belongs to the class I adolases ...
86-187 7.74e-05

KDPG and KHG aldolase; KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.


Pssm-ID: 188632  Cd Length: 190  Bit Score: 42.51  E-value: 7.74e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  86 EFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIkvgVGPGSvcttrtktgvgypqlsaVIECADSAHGLKGHIIsd 165
Cdd:cd00452    44 EAIRALRKEFPEALIGAGTVLTPEQADAAIAAGAQFI---VSPGL-----------------DPEVVKAANRAGIPLL-- 101
                          90       100
                  ....*....|....*....|..
gi 1039743937 166 GGCTCPGDVAKAFGAGADFVML 187
Cdd:cd00452   102 PGVATPTEIMQALELGADIVKL 123
DHOD_DHPD_FMN cd02810
Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding ...
44-188 1.64e-04

Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of the Fe-S clusters show a hitherto unobserved coordination involving a glutamine residue.


Pssm-ID: 239204 [Multi-domain]  Cd Length: 289  Bit Score: 42.34  E-value: 1.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  44 HVAVSSGSGQnDLERMSRILEAVPQVKFICLDVANGYSEHFVEFVKLVRSKfpEHTIMAGNVVTGEmveeliLSGADIIK 123
Cdd:cd02810   136 NVGGGRQLGQ-DPEAVANLLKAVKAAVDIPLLVKLSPYFDLEDIVELAKAA--ERAGADGLTAINT------ISGRVVDL 206
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039743937 124 VGVGPGSVcttRTKTGV-GYPQLSAVIEC--ADSAHGLKG-HIISDGGCTCPGDVAKAFGAGADFVMLG 188
Cdd:cd02810   207 KTVGPGPK---RGTGGLsGAPIRPLALRWvaRLAARLQLDiPIIGVGGIDSGEDVLEMLMAGASAVQVA 272
TIM_phosphate_binding cd04722
TIM barrel proteins share a structurally conserved phosphate binding motif and in general ...
74-189 1.41e-03

TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate comes either from the substrate, as in the case of inosine monophosphate dehydrogenase (IMPDH), or from ribulose-5-phosphate 3-epimerase (RPE) or from cofactors, like FMN.


Pssm-ID: 240073 [Multi-domain]  Cd Length: 200  Bit Score: 39.11  E-value: 1.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  74 LDVANGYS-EHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEE-LILSGADIIKVGvgpGSVCTTRTKTGVgyPQLSAVIEC 151
Cdd:cd04722    90 IHGAVGYLaREDLELIRELREAVPDVKVVVKLSPTGELAAAaAEEAGVDEVGLG---NGGGGGGGRDAV--PIADLLLIL 164
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1039743937 152 ADSAHGLKghIISDGGCTCPGDVAKAFGAGADFVMLGG 189
Cdd:cd04722   165 AKRGSKVP--VIAGGGINDPEDAAEALALGADGVIVGS 200
Glu_synthase pfam01645
Conserved region in glutamate synthase; This family represents a region of the glutamate ...
87-188 2.21e-03

Conserved region in glutamate synthase; This family represents a region of the glutamate synthase protein. This region is expressed as a separate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organizms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.


Pssm-ID: 396287 [Multi-domain]  Cd Length: 367  Bit Score: 39.24  E-value: 2.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039743937  87 FVKLVrSKFPEHTIMAGnVVTGemveelilsGADIIKV---GVGPGSVCTTRTKTgVGYPQLSAVIEcADSAHGLKGH-- 161
Cdd:pfam01645 206 SVKLV-SGHGVGTIAAG-VAKA---------GADIILIdgyDGGTGASPKTSIKH-AGLPWELALAE-AHQTLKENGLrd 272
                          90       100       110
                  ....*....|....*....|....*....|
gi 1039743937 162 ---IISDGGCTCPGDVAKAFGAGADFVMLG 188
Cdd:pfam01645 273 rvsLIADGGLRTGADVAKAAALGADAVYIG 302
GltS_FMN cd02808
Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that ...
156-191 8.49e-03

Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant, yeast and bacterial pathway for ammonia assimilation. It is a multifunctional enzyme that functions through three distinct active centers, carrying out L-glutamine hydrolysis, conversion of 2-oxoglutarate into L-glutamate, and electron uptake from an electron donor.


Pssm-ID: 239202 [Multi-domain]  Cd Length: 392  Bit Score: 37.52  E-value: 8.49e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1039743937 156 HGLKGHI--ISDGGCTCPGDVAKAFGAGADFVMLGGMF 191
Cdd:cd02808   280 NGLRDRVslIASGGLRTGADVAKALALGADAVGIGTAA 317
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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