|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
159-254 |
1.09e-23 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
:
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.10 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 159 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 220
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 1034613594 221 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 254
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
538-840 |
3.82e-06 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 3.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 538 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 617
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 618 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 697
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 698 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 769
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034613594 770 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 840
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
319-634 |
5.39e-05 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 319 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 398
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 399 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 478
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 479 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 558
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034613594 559 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 634
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
159-254 |
1.09e-23 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.10 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 159 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 220
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 1034613594 221 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 254
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
538-840 |
3.82e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 3.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 538 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 617
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 618 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 697
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 698 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 769
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034613594 770 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 840
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
319-634 |
5.39e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 319 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 398
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 399 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 478
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 479 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 558
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034613594 559 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 634
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4592 |
pfam15262 |
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, ... |
159-254 |
1.09e-23 |
|
Domain of unknown function (DUF4592); This protein family is a domain of unknown function, which lies to the N-terminus of the protein. This domain family is found in eukaryotes, and is typically between 114 and 130 amino acids in length. There are two completely conserved residues (L and A) that may be functionally important. In humans, the gene that encodes this protein lies in the position, chromosome 2 open reading frame 55.
Pssm-ID: 464602 [Multi-domain] Cd Length: 127 Bit Score: 97.10 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 159 AKRGEDAGMSSEDDGLPRSPPEMSLLHDVGPGTTIKVSVVSPDHVSDSTVSAR------------------ISDNSLAPV 220
Cdd:pfam15262 14 TKRADDAGASSEDDGLPRSPPEISLLHEILLSTESKSSDPPQHLSSLSLAGTGseeeeqstpvkssrpkspFSPSGTIEP 93
|
90 100 110
....*....|....*....|....*....|....
gi 1034613594 221 ADFSYPAESSSCLDNSAAKHKLQVKPRNQRSSKM 254
Cdd:pfam15262 94 INFDAPPQALACLDNSAAKHKLSVKPKNQRASRK 127
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
538-840 |
3.82e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 3.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 538 EPGPGSLDAEAAAperpkaerAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARS 617
Cdd:PRK07003 359 EPAVTGGGAPGGG--------VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 618 GPVWRSEAAlDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEdRNPFP 697
Cdd:PRK07003 431 APPATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT-PAAVP 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 698 VKLRSTSLSLKYRDGAsqevkgvkrysAEVRLERSLTVLPKEEKCPL---GTAPAL-----RGTRAPSDQGKGKARPPEP 769
Cdd:PRK07003 509 DARAPAAASREDAPAA-----------AAPPAPEARPPTPAAAAPAAragGAAAALdvlrnAGMRVSSDRGARAAAAAKP 577
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034613594 770 lsskpplprkpllqsftlphqPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGA--DGQPAPPW 840
Cdd:PRK07003 578 ---------------------AAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAaeSRGAPPPW 629
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
409-872 |
5.03e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 5.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 409 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPErsvpkeAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGT 488
Cdd:PHA03247 2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHP------PPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASS 2678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 489 EPERigtepstapapsppapkscLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 568
Cdd:PHA03247 2679 PPQR-------------------PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAP 2739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 569 AAPERKAerggaelrgAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPVwrseaalddlqgLPEPQHAKPGPRKLAE 648
Cdd:PHA03247 2740 APPAVPA---------GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR------------LTRPAVASLSESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 649 RGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPvklrsTSLSLkyrdGASQEVKGVKRYSAEVR 728
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP-----PSLPL----GGSVAPGGDVRRRPPSR 2869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 729 LERSLTVLPKEEKCPLGTAPAlrgtraPSDQGKGKARPPEPlsskPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPR 808
Cdd:PHA03247 2870 SPAAKPAAPARPPVRRLARPA------VSRSTESFALPPDQ----PERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034613594 809 TAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKSEPG 872
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
409-776 |
1.83e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 1.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 409 PEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKeAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGT 488
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 489 EPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 568
Cdd:PHA03307 160 AAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDS 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 569 AAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPvwRSEAALDDLQGLPEPQHAKPGPRKLAE 648
Cdd:PHA03307 240 SSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS--PRERSPSPSPSSPGSGPAPSSPRASSS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 649 RGPQDSGDRAASpaGPRKSPQEAAAAPGTREPCPAaqePAPSEDRNPFPVKLRSTSLSLKYRDGASQEVKGvkrySAEVR 728
Cdd:PHA03307 318 SSSSRESSSSST--SSSSESSRGAAVSPGPSPSRS---PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG----RPTRR 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1034613594 729 LERSltvLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSSKPPL 776
Cdd:PHA03307 389 RARA---AVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLL 433
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
361-878 |
3.33e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 3.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 361 APTLRVEPPSPPEGPPNPGPDGGKQDGEAPPagpcapatdkaeevvcAPEDVASPFPTAIPE---GDTTPPETDPAATSE 437
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPD----------------APPAPSRLAPAILPDepvGEPVHPRMLTWIRGL 2540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 438 APSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERI-----GTEPSTAPAPSPPAPKSCL 512
Cdd:PHA03247 2541 EELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSArprapVDDRGDPRGPAPPSPLPPD 2620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 513 KHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 592
Cdd:PHA03247 2621 THAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAD 2700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 593 CRARPRPGVSRPLERASGrLPLARSGPVWRSEAALDDLQGLPEPQHAKP----GPRKLAERGPQDSGDRAASPAGPRKSP 668
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSA-TPLPPGPAAARQASPALPAAPAPPAVPAGPatpgGPARPARPPTTAGPPAPAPPAAPAAGP 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 669 QEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSLkyrDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAP 748
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAAL---PPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 749 ALRG-------TRAPSDQGKGKARPPEPLSSKPPLPRKPllQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEK 821
Cdd:PHA03247 2857 APGGdvrrrppSRSPAAKPAAPARPPVRRLARPAVSRST--ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP 2934
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1034613594 822 S--LPPAATGPGADGQPAPPWITVTRQKRRGTLdqPPNQEDKPGARTLKSEPGKQAKVP 878
Cdd:PHA03247 2935 PppRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL--VPGRVAVPRFRVPQPAPSREAPAS 2991
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
319-634 |
5.39e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 319 ARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 398
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 399 TDKAeevvcAPEDVASPFPTAIPEGDTTPPetdpAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREA 478
Cdd:PRK07003 463 CDER-----DAQPPADSGSASAPASDAPPD----AAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEAR 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 479 ETEPerGAGTEPERIGTepstapapsppapksclkhrpAAASegpaaspplaaaesppvepgpgsLDAEAAAPERPKAER 558
Cdd:PRK07003 534 PPTP--AAAAPAARAGG---------------------AAAA-----------------------LDVLRNAGMRVSSDR 567
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034613594 559 AEAPPAGAERAAPERKAERggaelrgakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLP 634
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPK----------------PAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
485-695 |
1.09e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 485 GAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGS--LDAEAAAPERPKAERAEAP 562
Cdd:PRK12323 369 GGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpaPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 563 -PAGAERAAPERKAERGGAELRGakkfsvsscRARPRPGVSRPLERASGRLPLARSGPVWrsEAALDDLqGLPEPQHAKP 641
Cdd:PRK12323 449 aPAPAPAAAPAAAARPAAAGPRP---------VAAAAAAAPARAAPAAAPAPADDDPPPW--EELPPEF-ASPAPAQPDA 516
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034613594 642 GPRKLAERGPQDSGDRAASPAGPRKSPQEAAA----APGTREPCPAAQEPAPSEDRNP 695
Cdd:PRK12323 517 APAGWVAESIPDPATADPDDAFETLAPAPAAApaprAAAATEPVVAPRPPRASASGLP 574
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
541-888 |
2.95e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 2.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 541 PGSLDAEAAAperpkAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSScRARPRPGVSRPLERASGRLPLARSGPV 620
Cdd:PRK07764 365 PSASDDERGL-----LARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 621 WRSEAALDDLQGLPEPQHAkPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDR------- 693
Cdd:PRK07764 439 PAPPSPAGNAPAGGAPSPP-PAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAtlrerwp 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 694 -------------------NPFPVKLRSTSLSLKYRDGASQEVKGVKRYSAEVRlerslTVLPKEekcpLGTAPALRGTR 754
Cdd:PRK07764 518 eilaavpkrsrktwaillpEATVLGVRGDTLVLGFSTGGLARRFASPGNAEVLV-----TALAEE----LGGDWQVEAVV 588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 755 APSDQGKGKARPPEPLSSKPPlPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSlPPAATGPGADG 834
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPP-EEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPK-HVAVPDASDGG 666
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1034613594 835 QPAPPWITVTRQKRRGTLDQPPNQEDKPGARTLKSEPGK-QAKVPERGQEPVKQA 888
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPaATPPAGQADDPAAQP 721
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
427-839 |
4.41e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 4.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 427 PPETDPAATSEAPSARDGPERSVPKEAEPTPPVL--PDEEKGPPGPAPEPEREAETEPERGAGTEPERiGTEPSTAPAPS 504
Cdd:PHA03307 44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTeaPANESRSTPTWSLSTLAPASPAREGSPTPPGP-SSPDPPPPTPP 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 505 PPAPKSclKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRG 584
Cdd:PHA03307 123 PASPPP--SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 585 AKKfsvSSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGP 664
Cdd:PHA03307 201 AAS---PRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 665 RKS-PQEAAAAPGTREPCPAAQEPAPSEDRNPfpvklrSTSLSLKYRDGasqevkgvkrySAEVRLERSLTVLPKEEKCP 743
Cdd:PHA03307 278 PSSrPGPASSSSSPRERSPSPSPSSPGSGPAP------SSPRASSSSSS-----------SRESSSSSTSSSSESSRGAA 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 744 LGTAPALrgtrapsdqgkgkARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSL 823
Cdd:PHA03307 341 VSPGPSP-------------SRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRF 407
|
410
....*....|....*....
gi 1034613594 824 P---PAATGPGADGQPAPP 839
Cdd:PHA03307 408 PagrPRPSPLDAGAASGAF 426
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
412-695 |
5.64e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 5.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 412 VASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPE 491
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 492 RIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAP 571
Cdd:PRK07003 452 KANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPE 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 572 ERKAErggaelrgakkfsvsscrarprPGVSRPLERASGrlplarsgpvwrSEAALDDLQglpepqhaKPGPRKLAERGp 651
Cdd:PRK07003 532 ARPPT----------------------PAAAAPAARAGG------------AAAALDVLR--------NAGMRVSSDRG- 568
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1034613594 652 QDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNP 695
Cdd:PRK07003 569 ARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNG 612
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
514-695 |
1.04e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 514 HRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERggaelrgakkfsvssc 593
Cdd:PRK07764 636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA---------------- 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 594 RARPRPGVSRPLERASGRLPLARSGPV--WRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEA 671
Cdd:PRK07764 700 QPAPAPAATPPAGQADDPAAQPPQAAQgaSAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
170 180
....*....|....*....|....
gi 1034613594 672 AAAPGTREpcPAAQEPAPSEDRNP 695
Cdd:PRK07764 780 SEEEEMAE--DDAPSMDDEDRRDA 801
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
546-883 |
1.11e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.24 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 546 AEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLA-RSGPVWRSE 624
Cdd:PHA03307 56 VAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASpPPSPAPDLS 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 625 AALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPC--PAAQEPAPSEDRNPFPVKLRS 702
Cdd:PHA03307 136 EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEppPSTPPAAASPRPPRRSSPISA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 703 TSLSLKYRDGASQEVKGVKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSSKP------PL 776
Cdd:PHA03307 216 SASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSssspreRS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 777 PRKPLLQSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSLPPAATGPGADGQPAPPWITVTRQKRRGTLDQPP 856
Cdd:PHA03307 296 PSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAP 375
|
330 340
....*....|....*....|....*..
gi 1034613594 857 NQEDKPGARTLKSEPGKQAKVPERGQE 883
Cdd:PHA03307 376 SSPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
421-834 |
1.56e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 421 PEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPdeekgppgpapEPEREAETEPERGAGTEPERIGTEPSTA 500
Cdd:PRK07764 381 LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA-----------APAPAAAPQPAPAPAPAPAPPSPAGNAP 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 501 PAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPgslDAEAAAPERPKAERAEAPPAGAER-------AAPER 573
Cdd:PRK07764 450 AGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAP---AAAPAAPAAPAAPAGADDAATLRErwpeilaAVPKR 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 574 KAERGGAELRGAK-----------KFSVSSCRAR-PRPGVSRPLERASgrlpLARSGPVWRSEAALD-DLQGLPEPQHAK 640
Cdd:PRK07764 527 SRKTWAILLPEATvlgvrgdtlvlGFSTGGLARRfASPGNAEVLVTAL----AEELGGDWQVEAVVGpAPGAAGGEGPPA 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 641 PGPRKLAERGPQ-DSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSlKYRDGASQEVKG 719
Cdd:PRK07764 603 PASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW-PAKAGGAAPAAP 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 720 VKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTR---APSDQGKGKARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDA 796
Cdd:PRK07764 682 PPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDpaaQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPP 761
|
410 420 430
....*....|....*....|....*....|....*...
gi 1034613594 797 GPGEREPrkePRTAEKRPLRRGAEKSLPPAATGPGADG 834
Cdd:PRK07764 762 PAPAPAA---APAAAPPPSPPSEEEEMAEDDAPSMDDE 796
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
411-635 |
3.16e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 3.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 411 DVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEP 490
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 491 ER--IGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAER 568
Cdd:PRK12323 451 APapAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034613594 569 AAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGpvWRSEAALDDLQGLPE 635
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD--WPALAARLPVRGLAQ 595
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
484-694 |
5.35e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 40.66 E-value: 5.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 484 RGAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPP 563
Cdd:PRK12678 59 RGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAAR 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 564 AGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSgpvwRSEAALDDLQGLPEPQHAKPGP 643
Cdd:PRK12678 139 RGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGR----REERGRDGDDRDRRDRREQGDR 214
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1034613594 644 RKlaERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRN 694
Cdd:PRK12678 215 RE--ERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRG 263
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
513-621 |
5.98e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 513 KHRPAAASEGPAASPPLAAAESPPVEPgpgsldaEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 592
Cdd:PRK14951 391 AAPVAQAAAAPAPAAAPAAAASAPAAP-------PAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIP 463
|
90 100 110
....*....|....*....|....*....|....
gi 1034613594 593 CRARPRPGVSRPLERASG-----RLPLARSGPVW 621
Cdd:PRK14951 464 VRVAPEPAVASAAPAPAAapaaaRLTPTEEGDVW 497
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
313-779 |
9.17e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.31 E-value: 9.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 313 LPPPGGARARRArlqhssaltasveeGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPA 392
Cdd:PHA03247 2624 PDPPPPSPSPAA--------------NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAAR 2689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 393 GPCAPATDKAEEVvcAPEDVASPFPTAIPEGDTTPPETDPAATSEAPSardgPERSVPKeAEPTPPVLPDEEKGPPGPAP 472
Cdd:PHA03247 2690 PTVGSLTSLADPP--PPPPTPEPAPHALVSATPLPPGPAAARQASPAL----PAAPAPP-AVPAGPATPGGPARPARPPT 2762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 473 EPEREAETEPERGAGTEPERigTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPE 552
Cdd:PHA03247 2763 TAGPPAPAPPAAPAAGPPRR--LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP 2840
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 553 RPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRAR--PRPGVSR--------PLERASGRLPLARSGPVWR 622
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRrlARPAVSRstesfalpPDQPERPPQPQAPPPPQPQ 2920
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 623 SEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDraasPAGPRKSPQEAAAAPG--------TREPCPAAQEPAPS---- 690
Cdd:PHA03247 2921 PQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGE----PSGAVPQPWLGALVPGrvavprfrVPQPAPSREAPASStppl 2996
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034613594 691 ------------------EDRNPFPVKLRSTSLSLKYRDGASQEvkGVKRYSAEVRLERSLTVLPKEEKCPLGTAPALRG 752
Cdd:PHA03247 2997 tghslsrvsswasslalhEETDPPPVSLKQTLWPPDDTEDSDAD--SLFDSDSERSDLEALDPLPPEPHDPFAHEPDPAT 3074
|
490 500
....*....|....*....|....*..
gi 1034613594 753 TRAPSDQGKGKARPPEPLSSKPPLPRK 779
Cdd:PHA03247 3075 PEAGARESPSSQFGPPPLSANAALSRR 3101
|
|
| |
