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Conserved domains on  [gi|1002241323|ref|XP_015624958|]
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uncharacterized protein [Oryza sativa Japonica Group]

Protein Classification

DUF1138 domain-containing protein( domain architecture ID 10535010)

DUF1138 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1138 pfam06592
Protein of unknown function (DUF1138); This family consists of several hypothetical short ...
 3-75 7.20e-47

Protein of unknown function (DUF1138); This family consists of several hypothetical short plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.


:

Pssm-ID: 429021  Cd Length: 73  Bit Score: 143.32  E-value: 7.20e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002241323  3 TKYIIGSVAASFAFAYVCEIYIAEGKLLGGTTTRTMATDEWGKETDKKFQAWPRTAGPPVVMNPVRRQNFIVK 75
Cdd:pfam06592  1 TKYIIGALAGSFAIAYVCDVYVSDKKIFGGTTPKTVSNKEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 73
 
Name Accession Description Interval E-value
DUF1138 pfam06592
Protein of unknown function (DUF1138); This family consists of several hypothetical short ...
 3-75 7.20e-47

Protein of unknown function (DUF1138); This family consists of several hypothetical short plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.


Pssm-ID: 429021  Cd Length: 73  Bit Score: 143.32  E-value: 7.20e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002241323  3 TKYIIGSVAASFAFAYVCEIYIAEGKLLGGTTTRTMATDEWGKETDKKFQAWPRTAGPPVVMNPVRRQNFIVK 75
Cdd:pfam06592  1 TKYIIGALAGSFAIAYVCDVYVSDKKIFGGTTPKTVSNKEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 73
 
Name Accession Description Interval E-value
DUF1138 pfam06592
Protein of unknown function (DUF1138); This family consists of several hypothetical short ...
 3-75 7.20e-47

Protein of unknown function (DUF1138); This family consists of several hypothetical short plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.


Pssm-ID: 429021  Cd Length: 73  Bit Score: 143.32  E-value: 7.20e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002241323  3 TKYIIGSVAASFAFAYVCEIYIAEGKLLGGTTTRTMATDEWGKETDKKFQAWPRTAGPPVVMNPVRRQNFIVK 75
Cdd:pfam06592  1 TKYIIGALAGSFAIAYVCDVYVSDKKIFGGTTPKTVSNKEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVK 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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