|
Name |
Accession |
Description |
Interval |
E-value |
| OGFr_N |
pfam04664 |
Opioid growth factor receptor (OGFr) conserved region; Opioid peptides act as growth factors ... |
71-278 |
5.39e-145 |
|
Opioid growth factor receptor (OGFr) conserved region; Opioid peptides act as growth factors in neural and non-neural cells and tissues, in addition to serving in neurotransmission/neuromodulation in the nervous system. The Opioid growth factor receptor is an integral membrane protein associated with the nucleus. The conserved region is situated at the N-terminus of the member proteins with a series of imperfect repeats lying immediately to its C-terminus.
Pssm-ID: 461383 Cd Length: 208 Bit Score: 417.11 E-value: 5.39e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 71 DCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWRDNYDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQE 150
Cdd:pfam04664 1 DQPNDMANLKFYKNEIPFQPDGIYIEEFLQKWKGDYDKLEHNHSYIQWLFPLREPGVNWRAKPLTPKEIEAFKKSEEAKR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 151 RLVRAYELMLGFYGIRLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEETLVRQE 230
Cdd:pfam04664 81 RLLKSYKLMLGFYGIELLDEKTGEVKRASNWQERFQNLNRNSHNNLRITRILKSLGELGYEHYQAPLVRFFLEETLVHFT 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622841658 231 LPGVRQSALDYFMFAVRCRNQRRQLVHFAWEHFRPRCKFVWGPPDKLR 278
Cdd:pfam04664 161 LPNVKQSALDYFVFTVRDKRERRELVRFAWQHYKPRGKFVWGPWDKLQ 208
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
479-580 |
1.94e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 53.44 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 479 GHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGP-SPAGPAGDEPAESPSETPGPSPAGPAGD 557
Cdd:PHA03169 96 GSESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPhEPAPPESHNPSPNQQPSSFLQPSHEDSP 175
|
90 100
....*....|....*....|...
gi 1622841658 558 EPAKAGEAAEVQDTEAKPSAKSG 580
Cdd:PHA03169 176 EEPEPPTSEPEPDSPGPPQSETP 198
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
305-580 |
7.69e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.48 E-value: 7.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 305 DHKASTQGRTCGPEHSKGRGRVDEGPQPRSVEPQDAGPLERSQGDEAGGYGEDGPEPLSPKESKKRKLELSRREQPPTEP 384
Cdd:PHA03307 63 DRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 385 GPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCPQPLGARVADKVRKRRRVDEGSGDSAVVASdgaqtl 464
Cdd:PHA03307 143 SPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISAS------ 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 465 alAGCPAPSGyPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPA----GPAGDEPAESPSETPGPSPAGPAGDEPA 540
Cdd:PHA03307 217 --ASSPAPAP-GRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPApitlPTRIWEASGWNGPSSRPGPASSSSSPRE 293
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1622841658 541 ESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSAKSG 580
Cdd:PHA03307 294 RSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSS 333
|
|
| DLIC |
pfam05783 |
Dynein light intermediate chain (DLIC); This family consists of several eukaryotic dynein ... |
502-580 |
9.47e-04 |
|
Dynein light intermediate chain (DLIC); This family consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organization, and function of centrosomes and mitotic spindles when bound to pericentrin. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organization by binding cytoplasmic dynein 2 to its Golgi-associated cargo.
Pssm-ID: 368612 Cd Length: 468 Bit Score: 42.14 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 502 SPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSE------------TPGPSPAGPAGDEPAKAGEAAEVQ 569
Cdd:pfam05783 354 SPARSPSGSPRTTNRSGPANVASVSPQTSVKKIDPNMKPGAASEgvlanffnsllsKKTGSPGGGSPGGGTGSGRGSNVQ 433
|
90
....*....|.
gi 1622841658 570 DTEAKPSAKSG 580
Cdd:pfam05783 434 DSAKKSGQKPV 444
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
489-566 |
1.25e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 1.25e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622841658 489 TEGRTGPKEGTPGSPSeTPGPSPAgpagdepaesPSETPGPSPAGPAGDEPAESPSETP-GPSPAGPAGDEPAKAGEAA 566
Cdd:TIGR00601 80 GTGKVAPPAATPTSAP-TPTPSPP----------ASPASGMSAAPASAVEEKSPSEESAtATAPESPSTSVPSSGSDAA 147
|
|
| KLF14_N |
cd21576 |
N-terminal domain of Kruppel-like factor 14; Kruppel-like factor 14 (KLF14; also known as ... |
374-543 |
4.27e-03 |
|
N-terminal domain of Kruppel-like factor 14; Kruppel-like factor 14 (KLF14; also known as Krueppel-like factor 14 or basic transcription element-binding protein 5/BTEB5) is a protein that in humans is encoded by the KLF14 gene. KLF14 regulates the transcription of various genes, including TGFbetaRII (the type II receptor for TGFbeta). KLF14 is expressed in many tissues, lacks introns, and is subject to parent-specific expression. It also appears to be a master regulator of gene expression in adipose tissue. KLF14 is associated with coronary artery disease, hypercholesterolemia, and type 2 diabetes. KLF9, KLF10, KLF11, KLF13, KLF14, and KLF16 share a conserved alpha-helical motif AA/VXXL that mediates their binding to Sin3A and their activities as transcriptional repressors. KLF14 belongs to a family of proteins, called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Members of the KLF family can act as activators or repressors of transcription depending on cell and promoter context. KLFs regulate various cellular functions, such as proliferation, differentiation, and apoptosis, as well as the development and homeostasis of several types of tissue. In addition to the C-terminal DNA-binding domain, each KLF also has a unique N-terminal activation/repression domain that confers specificity and allows it to bind specifically to a certain partner, leading to distinct activities in vivo. This model represents the N-terminal domain of KLF14.
Pssm-ID: 409238 [Multi-domain] Cd Length: 195 Bit Score: 38.65 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 374 LSRREQPPTEPGPQSASEVEKIALN--LEGCALSQGSLRTGTQEVGGQDPGEAvQPCPQPLGARV-ADKvrkRRRVDEGS 450
Cdd:cd21576 24 LHRRAPDPEGAGGAAGSEVGAAPPEsaLPGPGPPGPAWVPPLLQVPAPSPGAG-GAAPHLLAASVlADL---RGGAGEGS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 451 GDSAVVAsdgaqTLALAGCPAP-SGYPKAGHSENGVEEDTEGRTGPkEGTPGSPsETPGPSPAGPAGDEPAESPSETPGP 529
Cdd:cd21576 100 REDSGEA-----PRASSGSSDPaRGSSPTLGSEPAPASGEDAVSGP-ESSFGAP-AIPSAPAAPGAPAVSGEVPGGAPGA 172
|
170
....*....|....
gi 1622841658 530 SPAGPAGDEPAESP 543
Cdd:cd21576 173 GPAPAAGPAPRRRP 186
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
478-562 |
4.56e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.60 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 478 AGHSENGVEEDTEGRTGPkEGTPGSPSETPGPSPAGPAGDEPAESPSEtPGPSPAGPAGDEPAESPSeTPGPSPAGPAGD 557
Cdd:NF041121 12 AAQMGRAAAPPSPEGPAP-TAASQPATPPPPAAPPSPPGDPPEPPAPE-PAPLPAPYPGSLAPPPPP-PPGPAGAAPGAA 88
|
....*
gi 1622841658 558 EPAKA 562
Cdd:NF041121 89 LPVRV 93
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
499-568 |
4.64e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.60 E-value: 4.64e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622841658 499 TPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSP-----AGPAGDEPAKAGEAAEV 568
Cdd:NF041121 15 MGRAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPgslapPPPPPPGPAGAAPGAAL 89
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| OGFr_N |
pfam04664 |
Opioid growth factor receptor (OGFr) conserved region; Opioid peptides act as growth factors ... |
71-278 |
5.39e-145 |
|
Opioid growth factor receptor (OGFr) conserved region; Opioid peptides act as growth factors in neural and non-neural cells and tissues, in addition to serving in neurotransmission/neuromodulation in the nervous system. The Opioid growth factor receptor is an integral membrane protein associated with the nucleus. The conserved region is situated at the N-terminus of the member proteins with a series of imperfect repeats lying immediately to its C-terminus.
Pssm-ID: 461383 Cd Length: 208 Bit Score: 417.11 E-value: 5.39e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 71 DCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWRDNYDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQE 150
Cdd:pfam04664 1 DQPNDMANLKFYKNEIPFQPDGIYIEEFLQKWKGDYDKLEHNHSYIQWLFPLREPGVNWRAKPLTPKEIEAFKKSEEAKR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 151 RLVRAYELMLGFYGIRLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEETLVRQE 230
Cdd:pfam04664 81 RLLKSYKLMLGFYGIELLDEKTGEVKRASNWQERFQNLNRNSHNNLRITRILKSLGELGYEHYQAPLVRFFLEETLVHFT 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1622841658 231 LPGVRQSALDYFMFAVRCRNQRRQLVHFAWEHFRPRCKFVWGPPDKLR 278
Cdd:pfam04664 161 LPNVKQSALDYFVFTVRDKRERRELVRFAWQHYKPRGKFVWGPWDKLQ 208
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
479-580 |
1.94e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 53.44 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 479 GHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGP-SPAGPAGDEPAESPSETPGPSPAGPAGD 557
Cdd:PHA03169 96 GSESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPhEPAPPESHNPSPNQQPSSFLQPSHEDSP 175
|
90 100
....*....|....*....|...
gi 1622841658 558 EPAKAGEAAEVQDTEAKPSAKSG 580
Cdd:PHA03169 176 EEPEPPTSEPEPDSPGPPQSETP 198
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
305-580 |
7.69e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.48 E-value: 7.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 305 DHKASTQGRTCGPEHSKGRGRVDEGPQPRSVEPQDAGPLERSQGDEAGGYGEDGPEPLSPKESKKRKLELSRREQPPTEP 384
Cdd:PHA03307 63 DRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 385 GPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCPQPLGARVADKVRKRRRVDEGSGDSAVVASdgaqtl 464
Cdd:PHA03307 143 SPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISAS------ 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 465 alAGCPAPSGyPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPA----GPAGDEPAESPSETPGPSPAGPAGDEPA 540
Cdd:PHA03307 217 --ASSPAPAP-GRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPApitlPTRIWEASGWNGPSSRPGPASSSSSPRE 293
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1622841658 541 ESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSAKSG 580
Cdd:PHA03307 294 RSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSS 333
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
282-580 |
1.99e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.94 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 282 PSSWPRLLEGSRKAEEEGSPGDPDHKASTQGRTCGPEHSKG-RGRVDEGPQPRSVEPQDAGPLERSQGDEAGGYGEDGPE 360
Cdd:PHA03307 128 PSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASsRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPP 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 361 PLSPKESKKRKLELSRREQPPTEPGPQSASevekialnleGCALSQGSLRTGTQEVGGQDPGEAVQPCPQPLGARVADKV 440
Cdd:PHA03307 208 RRSSPISASASSPAPAPGRSAADDAGASSS----------DSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 441 RKRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSENGVEEDTEGRTGPKE-----GTPGSPSETPGPSPAGPA 515
Cdd:PHA03307 278 PSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSEssrgaAVSPGPSPSRSPSPSRPP 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 516 GDEPAESPSETPGPSPAGPAGDEPAESP---------------SETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSAKSG 580
Cdd:PHA03307 358 PPADPSSPRKRPRPSRAPSSPAASAGRPtrrraraavagrarrRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSG 437
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
384-556 |
3.11e-06 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 49.98 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 384 PGPQSASE-VEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPcpQPLGARVADKVRKRRRVDEGSGDSAVVASDGAQ 462
Cdd:PRK13108 282 PGALRGSEyVVDEALEREPAELAAAAVASAASAVGPVGPGEPNQP--DDVAEAVKAEVAEVTDEVAAESVVQVADRDGES 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 463 TlalaGCPAPSGYPKAGHSENGvEEDTEGRTGPKEGTPGSpSETPGpSPAGPAGDEPAESPSETPGPSPAGPAGDEPAES 542
Cdd:PRK13108 360 T----PAVEETSEADIEREQPG-DLAGQAPAAHQVDAEAA-SAAPE-EPAALASEAHDETEPEVPEKAAPIPDPAKPDEL 432
|
170
....*....|....
gi 1622841658 543 PSETPGPSPAGPAG 556
Cdd:PRK13108 433 AVAGPGDDPAEPDG 446
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
455-577 |
7.24e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.21 E-value: 7.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 455 VVASDGAQTLALAGCPAPSGYPKAGHSENGVEedteGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGP 534
Cdd:PRK07764 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAA----PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA 460
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1622841658 535 AGD---EPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PRK07764 461 APSaqpAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGA 506
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
497-567 |
7.98e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 48.58 E-value: 7.98e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622841658 497 EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDePAKAGEAAE 567
Cdd:PRK14965 379 RGAPAPPSAAWGAPTPAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARSAD-PAAAASAGD 448
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
417-582 |
8.18e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.08 E-value: 8.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 417 GGQDPGEAVQPcpqplgaRVADKVRKRRRVDEGSGDSAVVASDGAQTLALAGCPAPS---------GYPKAGHSENGVEE 487
Cdd:PRK07003 364 GGGAPGGGVPA-------RVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKaaaaaaatrAEAPPAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 488 DTEGRTGPKEGTPGSPSETPGPSPAGPA--GDEPAESPSETPGPSPAGP--AGDEPAES----------PSETPGPSPAG 553
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCDerDAQPPADSGSASAPASDAPpdAAFEPAPRaaapsaatpaAVPDARAPAAA 516
|
170 180 190
....*....|....*....|....*....|...
gi 1622841658 554 PAGDEPAKAGE----AAEVQDTEAKPSAKSGKA 582
Cdd:PRK07003 517 SREDAPAAAAPpapeARPPTPAAAAPAARAGGA 549
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
273-582 |
9.56e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.63 E-value: 9.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 273 PPDKLRRFKPSSWPRLLEGSRKAEEEGSPGDPDHkastqgrtcGPEHSKGRGRVDEGPQPRSVePQDAGPLERSQGDEAG 352
Cdd:PHA03307 78 EAPANESRSTPTWSLSTLAPASPAREGSPTPPGP---------SSPDPPPPTPPPASPPPSPA-PDLSEMLRPVGSPGPP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 353 GYGEDGPEPLSPKESkkrklelsrreqPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAV------- 425
Cdd:PHA03307 148 PAASPPAAGASPAAV------------ASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRrsspisa 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 426 -QPCPQPLGARvADKVRKRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPK--AGHSENGVEEDTEGRTGPKEGTPGS 502
Cdd:PHA03307 216 sASSPAPAPGR-SAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTriWEASGWNGPSSRPGPASSSSSPRER 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 503 PSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPaGPAGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PHA03307 295 SPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSP-GPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
484-579 |
1.17e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 484 GVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAG 563
Cdd:PRK07764 390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPA 469
|
90
....*....|....*.
gi 1622841658 564 EAAEVQDTEAKPSAKS 579
Cdd:PRK07764 470 PAAAPEPTAAPAPAPP 485
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
450-582 |
1.24e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 450 SGDSAVVASDGAQTLALAGCPAPSGYPKAGHSEngveedtegrTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGP 529
Cdd:PRK07003 363 TGGGAPGGGVPARVAGAVPAPGARAAAAVGASA----------VPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP 432
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1622841658 530 SPAGPAGDEPAESPSETPGPSPAgPAGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PRK07003 433 PATADRGDDAADGDAPVPAKANA-RASADSRCDERDAQPPADSGSASAPASDA 484
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
408-582 |
1.58e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.95 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 408 SLRTGTQEVGGQDPGEAVQPCPQPLGARVADKVRKRRRVDEGSGDSAVVASDGAqtlALAGCPAPSGYPKAGHSENGVEE 487
Cdd:PRK12323 362 AFRPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAA---ARAVAAAPARRSPAPEALAAARQ 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 488 DTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAG-------------DEPAESPSETPGPSPAGP 554
Cdd:PRK12323 439 ASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAapapadddpppweELPPEFASPAPAQPDAAP 518
|
170 180
....*....|....*....|....*...
gi 1622841658 555 AGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPA 546
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
286-579 |
1.73e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 286 PRLLEGSRKAEEEGS--PGDPDHKASTQGRTCGPEHSKGRGRvdegPQPRSVEP-------QDAGPLERSQGDEAGGYGE 356
Cdd:PHA03247 2531 PRMLTWIRGLEELASddAGDPPPPLPPAAPPAAPDRSVPPPR----PAPRPSEPavtsrarRPDAPPQSARPRAPVDDRG 2606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 357 DGPEPLSPKESkkrklelsrreqPPTEPGPQSASEvekialnlegcalsqgSLRTGTQEVGGQDPGEAVQPcPQPLGARV 436
Cdd:PHA03247 2607 DPRGPAPPSPL------------PPDTHAPDPPPP----------------SPSPAANEPDPHPPPTVPPP-ERPRDDPA 2657
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 437 ADKVRKRRRVDEGSgdSAVVASDGAQTLALAGCPAPSGYPKAGHSENGVEEDTEGRtgPKEGTPGSPSeTPGPSPAGPAG 516
Cdd:PHA03247 2658 PGRVSRPRRARRLG--RAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA--PHALVSATPL-PPGPAAARQAS 2732
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622841658 517 DEPAESPSETPGPS-PAGPAGDEPAESPSETPGPS----PAGPAGDEPAKAGEAAEVQDTEAKPSAKS 579
Cdd:PHA03247 2733 PALPAAPAPPAVPAgPATPGGPARPARPPTTAGPPapapPAAPAAGPPRRLTRPAVASLSESRESLPS 2800
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
421-570 |
2.14e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.54 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 421 PGEAVQP---CPQPLGARVADKVRKRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSEngvEEDTEGRTGPKE 497
Cdd:PRK07003 406 AGAALAPkaaAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQP---PADSGSASAPAS 482
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622841658 498 GTPGSPSETPGPSPAGPAgdEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEP-AKAGEAAEVQD 570
Cdd:PRK07003 483 DAPPDAAFEPAPRAAAPS--AATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPaARAGGAAAALD 554
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
415-577 |
2.19e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.67 E-value: 2.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 415 EVGGQDPGEAVQPCPQPLGARVADKVRKRRRVDEGSGDSAVVASDGAqtlalagcPAPSGYPKAGHSENGVEEDTegrtg 494
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAA--------AAPAEASAAPAPGVAAPEHH----- 653
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 495 PKEGTPGSPSETPGPSPAGPAGDEPAESPsetPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAK 574
Cdd:PRK07764 654 PKHVAVPDASDGGDGWPAKAGGAAPAAPP---PAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASA 730
|
...
gi 1622841658 575 PSA 577
Cdd:PRK07764 731 PSP 733
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
330-582 |
2.41e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.29 E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 330 PQPRSVEPQDAGPLERSQGDEAGGYGEDGPEPlspkeskkrklelsrREQPPTEPGPQSASEVEkialnleGCALSQGSL 409
Cdd:PRK07764 437 PAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP---------------APAAAPEPTAAPAPAPP-------AAPAPAAAP 494
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 410 RTGTQEVGGQDPGEAVQPcpQPLGARVADKVRKRRR-VDEGSGDSAVVASDGAQTLALAGCPAPSGY--PKAGHSENGVE 486
Cdd:PRK07764 495 AAPAAPAAPAGADDAATL--RERWPEILAAVPKRSRkTWAILLPEATVLGVRGDTLVLGFSTGGLARrfASPGNAEVLVT 572
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 487 --EDTEGRT--------GPKEGTPGSPSETPGPSPAGPAGDEPAES--PSETPGPSPAGPAGDEPAESPSETPGPSPAGP 554
Cdd:PRK07764 573 alAEELGGDwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPaaPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEH 652
|
250 260
....*....|....*....|....*...
gi 1622841658 555 AGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PRK07764 653 HPKHVAVPDASDGGDGWPAKAGGAAPAA 680
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
498-571 |
2.67e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 2.67e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622841658 498 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDT 571
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAA 112
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
496-582 |
4.19e-05 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 45.95 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 496 KEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPsPAGPAGDEPAESPSETPGPSPAgPAGDEPAKAGEAAEVQDTEAKP 575
Cdd:PRK12373 236 GDAAPVPPSEAARPKSADAETNAALKTPATAPKA-AAKNAKAPEAQPVSGTAAAEPA-PKEAAKAAAAAAKPALEDKPRP 313
|
....*....
gi 1622841658 576 --SAKSGKA 582
Cdd:PRK12373 314 lgIARPGGA 322
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
498-582 |
7.47e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.75 E-value: 7.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 498 GTPGSPSETPGPSPAGPAGDEPAESPSEtPGPSPAGPAGDEPAESPSETPGPSPAG-PAGDEPAKAGEAAEVQDTEAKPS 576
Cdd:PRK07764 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAP-AAAAPAAAAAPAPAAAPQPAPAPAPAPaPPSPAGNAPAGGAPSPPPAAAPS 463
|
....*.
gi 1622841658 577 AKSGKA 582
Cdd:PRK07764 464 AQPAPA 469
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
504-581 |
8.89e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 8.89e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622841658 504 SETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPS-PAGPAGDEPAKAGEAAEVQDTEAKPSAKSGK 581
Cdd:PRK12270 35 DYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAaPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
443-568 |
9.66e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 9.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 443 RRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGH--SENGVEEDTEGRTGPKEGTPGSPSETP-GPSPAGPAGDEP 519
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAaaPAPAAAPQPAPAPAPAPAPPSPAGNAPaGGAPSPPPAAAP 462
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1622841658 520 AESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEV 568
Cdd:PRK07764 463 SAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
366-577 |
1.03e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 44.96 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 366 ESKKRKLELSRREQP----PTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDpgeavqpcpqplgarvADKVR 441
Cdd:PHA03169 32 QAGRRRGTAARAAKPappaPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQG----------------GPSGS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 442 KRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS----PAGPAGD 517
Cdd:PHA03169 96 GSESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSsflqPSHEDSP 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622841658 518 EPAESPSETPGP-SPAGPAGDEPAESPSE-TPGPSPAGPAGDEPAKA-----GEAAEVQDTEAKPSA 577
Cdd:PHA03169 176 EEPEPPTSEPEPdSPGPPQSETPTSSPPPqSPPDEPGEPQSPTPQQApspntQQAVEHEDEPTEPER 242
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
410-552 |
1.17e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 410 RTGTQEVGGQDPGEAVQPCPQPLGARVADkvrkrRRVDEGSGDSAVVASDGAqtlALAGCPAPSGYPKAGHSENGVEEDT 489
Cdd:PRK07764 377 RLERLERRLGVAGGAGAPAAAAPSAAAAA-----PAAAPAPAAAAPAAAAAP---APAAAPQPAPAPAPAPAPPSPAGNA 448
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622841658 490 EGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAgdEPAESPSETPGPSPA 552
Cdd:PRK07764 449 PAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAP--AAPAAPAAPAGADDA 509
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
467-555 |
1.20e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 44.61 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 467 AGCPAPSG--YPKAGHSENGVEEDTEGRTGPKEGtpgspsetPGPSPAGPAGDEPAESpseTPGPSPAGPAGDEPAESPS 544
Cdd:PHA03264 272 GGSPAPPGddRPEAKPEPGPVEDGAPGRETGGEG--------EGPEPAGRDGAAGGEP---KPGPPRPAPDADRPEGWPS 340
|
90
....*....|....*
gi 1622841658 545 ET----PGPSPAGPA 555
Cdd:PHA03264 341 LEaitfPPPTPATPA 355
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
455-575 |
1.63e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 44.70 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 455 VVASDGAQTLAlaGCPAPSGYPKAGHSENGVEEDTEGRTGPKEGTPgSPSETPGPSPAGPAGDEPAESPSETPGPSPAG- 533
Cdd:PRK08691 397 RPEAETAQTPV--QTASAAAMPSEGKTAGPVSNQENNDVPPWEDAP-DEAQTAAGTAQTSAKSIQTASEAETPPENQVSk 473
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1622841658 534 --PAGDEPAESPSETPGPSPAGPA-GDEPAKAGEAAEVQDTEAKP 575
Cdd:PRK08691 474 nkAADNETDAPLSEVPSENPIQATpNDEAVETETFAHEAPAEPFY 518
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
451-577 |
1.71e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 451 GDSAVVASDGAQTLALAGCPAPSGyPKAGHSENGVEEDTEGRTGPKegTPGSPSETPGPSPAGPAGDEPAESPsetpgPS 530
Cdd:PHA03307 51 AAVTVVAGAAACDRFEPPTGPPPG-PGTEAPANESRSTPTWSLSTL--APASPAREGSPTPPGPSSPDPPPPT-----PP 122
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1622841658 531 PAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PHA03307 123 PASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASS 169
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
498-581 |
1.88e-04 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 44.31 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 498 GTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAG--DEPAESPSETPGPSPAGPAG------DEPAKAGEAAEVQ 569
Cdd:PLN02217 564 GNPGSTNSTPTGSAASSNTTFSSDSPSTVVAPSTSPPAGhlGSPPATPSKIVSPSTSPPAShlgspsTTPSSPESSIKVA 643
|
90
....*....|..
gi 1622841658 570 DTEAKPSAKSGK 581
Cdd:PLN02217 644 STETASPESSIK 655
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
472-577 |
1.91e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 1.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 472 PSGYPKAGHSE----NGVEEDTEGRTGPKEGTPG-----SPSETPGPSPAGPAGDE--------PAESPSETPGPSPAG- 533
Cdd:PHA03247 348 PLGFPKRRRPTwtppSSLEDLSAGRHHPKRASLPtrkrrSARHAATPFARGPGGDDqtrpaapvPASVPTPAPTPVPASa 427
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1622841658 534 ---PAGDEPAESPSETPGPSPAgPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PHA03247 428 pppPATPLPSAEPGSDDGPAPP-PERQPPAPATEPAPDDPDDATRKA 473
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
352-573 |
2.80e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 352 GGYGEDGPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPG--EAVQPCP 429
Cdd:PHA03247 262 GEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGamEVVSPLP 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 430 QPlGARVADKVRKRRRVDEGSGDSAVVASDGAQTLALAGcPAPSGYPKAGHSENGVEEDTEGRTGPKegtPGSPSETPGP 509
Cdd:PHA03247 342 RP-RQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRAS-LPTRKRRSARHAATPFARGPGGDDQTR---PAAPVPASVP 416
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622841658 510 SPAGPAGDEPAESPSETPGPSPAGPAGDepaeSPSETPGPSPAGPAGDEPAKAGEAAEVQDTEA 573
Cdd:PHA03247 417 TPAPTPVPASAPPPPATPLPSAEPGSDD----GPAPPPERQPPAPATEPAPDDPDDATRKALDA 476
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
489-569 |
3.67e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.30 E-value: 3.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 489 TEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEV 568
Cdd:PRK11633 73 EAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEEKAAPTGKAYVV 152
|
.
gi 1622841658 569 Q 569
Cdd:PRK11633 153 Q 153
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
486-582 |
3.77e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.04 E-value: 3.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 486 EEDTEGRTGPK-EGTPGSPSETPGPSPAGPAGDEPAEsPSETPGPSPAGPAGDEPAESPSETPGP------SPAGPAGDE 558
Cdd:PHA03169 83 EKEERGQGGPSgSGSESVGSPTPSPSGSAEELASGLS-PENTSGSSPESPASHSPPPSPPSHPGPhepappESHNPSPNQ 161
|
90 100
....*....|....*....|....
gi 1622841658 559 PAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PHA03169 162 QPSSFLQPSHEDSPEEPEPPTSEP 185
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
348-582 |
4.08e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 4.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 348 GDEAGGYGEDGPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQP 427
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDG 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 428 CPQPLGARvadkvrkrrrvdegSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSENGveedtEGRTGPKEGTPGSPSETP 507
Cdd:PRK07764 669 WPAKAGGA--------------APAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPA-----GQADDPAAQPPQAAQGAS 729
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622841658 508 GPSPAGPAGDEPAESPSETPGPSPA-GPAGDEPAESPSETPG--PSPAGPAGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PRK07764 730 APSPAADDPVPLPPEPDDPPDPAGApAQPPPPPAPAPAAAPAaaPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
454-577 |
4.22e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 454 AVVASDGAqtlaLAGCPAPSGYPKAGHSENGVEEDTEGRTGPKE-----GTPGSPSETPGPSPAGPAGDEPAESPSETPG 528
Cdd:PRK07764 586 AVVGPAPG----AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAapapaGAAAAPAEASAAPAPGVAAPEHHPKHVAVPD 661
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1622841658 529 PSPAGPAGDEPAESPS-ETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PRK07764 662 ASDGGDGWPAKAGGAApAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPA 711
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
273-582 |
4.47e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.39 E-value: 4.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 273 PPD--KLRRFKPSSWPRLLEGSRKAEEEGSPGDPDHKASTQGRTCGPEHSKGRGRVD------EGPQPRSVEPQdAGPLE 344
Cdd:PHA03247 2618 PPDthAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAqassppQRPRRRAARPT-VGSLT 2696
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 345 RSQgdeaggygeDGPEPLSPKESKKRKLElsrrEQPPTEPGPQSASEVEKIA-LNLEGCALSQGSLRTGTQEVGGQDPGE 423
Cdd:PHA03247 2697 SLA---------DPPPPPPTPEPAPHALV----SATPLPPGPAAARQASPALpAAPAPPAVPAGPATPGGPARPARPPTT 2763
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 424 AVQPCPQPLGARVADKVRKRRRvdegsgdsAVVASDGAQTLALAGCPAPSGYPKAGHSENGVEEDTEGRTG----PKEGT 499
Cdd:PHA03247 2764 AGPPAPAPPAAPAAGPPRRLTR--------PAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGplppPTSAQ 2835
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 500 PGSPSETPGPSPA--------GPAGD--------------------------EPAESPSETPGPSPAGPAGDEPAESPSE 545
Cdd:PHA03247 2836 PTAPPPPPGPPPPslplggsvAPGGDvrrrppsrspaakpaaparppvrrlaRPAVSRSTESFALPPDQPERPPQPQAPP 2915
|
330 340 350
....*....|....*....|....*....|....*..
gi 1622841658 546 TPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PHA03247 2916 PPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGA 2952
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
420-575 |
5.49e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 5.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 420 DPGEAVQPCPQPLGARVADKVRKRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSENGVEEDTEGRTGPKEGT 499
Cdd:PRK12323 402 PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPA 481
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622841658 500 PGSPSETPGPSPAG--PAGDEPAESPSETPGPSPAGPAGDEPAESPSetPGPSPAGPAGDEPAKAGEAAEVQDTEAKP 575
Cdd:PRK12323 482 RAAPAAAPAPADDDppPWEELPPEFASPAPAQPDAAPAGWVAESIPD--PATADPDDAFETLAPAPAAAPAPRAAAAT 557
|
|
| DLIC |
pfam05783 |
Dynein light intermediate chain (DLIC); This family consists of several eukaryotic dynein ... |
502-580 |
9.47e-04 |
|
Dynein light intermediate chain (DLIC); This family consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organization, and function of centrosomes and mitotic spindles when bound to pericentrin. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organization by binding cytoplasmic dynein 2 to its Golgi-associated cargo.
Pssm-ID: 368612 Cd Length: 468 Bit Score: 42.14 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 502 SPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSE------------TPGPSPAGPAGDEPAKAGEAAEVQ 569
Cdd:pfam05783 354 SPARSPSGSPRTTNRSGPANVASVSPQTSVKKIDPNMKPGAASEgvlanffnsllsKKTGSPGGGSPGGGTGSGRGSNVQ 433
|
90
....*....|.
gi 1622841658 570 DTEAKPSAKSG 580
Cdd:pfam05783 434 DSAKKSGQKPV 444
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
357-579 |
1.14e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.00 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 357 DGPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVekialnlegcalSQGSLRTGTqEVGGQDPGEAVQPCPQPLGARV 436
Cdd:PRK08691 367 DANAVIENTELQSPSAQTAEKETAAKKPQPRPEAET------------AQTPVQTAS-AAAMPSEGKTAGPVSNQENNDV 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 437 ADKVRKRRRVDEGSGdSAVVASDGAQTLALAGCPAPSGYPKAGHSENGveedtegrtgpkegTPGSPSETPGPSPAGPA- 515
Cdd:PRK08691 434 PPWEDAPDEAQTAAG-TAQTSAKSIQTASEAETPPENQVSKNKAADNE--------------TDAPLSEVPSENPIQATp 498
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622841658 516 GDEPAESPS---ETPGPSPAG---PAGDEPAESPSETPGP-----SPAGPAGDEPAKAGEAAEVQD--TEAKPSAKS 579
Cdd:PRK08691 499 NDEAVETETfahEAPAEPFYGygfPDNDCPPEDGAEIPPPdwehaAPADTAGGGADEEAEAGGIGGnnTPSAPPPEF 575
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
497-577 |
1.20e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 497 EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPS 576
Cdd:PRK14951 371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450
|
.
gi 1622841658 577 A 577
Cdd:PRK14951 451 P 451
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
524-582 |
1.22e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 1.22e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622841658 524 SETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSAKSGKA 582
Cdd:PRK12270 35 DYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAA 93
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
489-566 |
1.25e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 1.25e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622841658 489 TEGRTGPKEGTPGSPSeTPGPSPAgpagdepaesPSETPGPSPAGPAGDEPAESPSETP-GPSPAGPAGDEPAKAGEAA 566
Cdd:TIGR00601 80 GTGKVAPPAATPTSAP-TPTPSPP----------ASPASGMSAAPASAVEEKSPSEESAtATAPESPSTSVPSSGSDAA 147
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
424-567 |
1.29e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 424 AVQPCPQPLGArvADKVRKRRRVDEGSGDSAVVASDGAQT----LALAGCPAPSGYPKAGHSENGVEEDTEGRTGPKEGT 499
Cdd:PRK12323 425 RRSPAPEALAA--ARQASARGPGGAPAPAPAPAAAPAAAArpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEEL 502
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 500 PGS-PSETPGPSPAGPAGDEPAESPSetPGPSPAGPAGDEPAESPSETPGPSP-AGPAGDEPAKAGEAAE 567
Cdd:PRK12323 503 PPEfASPAPAQPDAAPAGWVAESIPD--PATADPDDAFETLAPAPAAAPAPRAaAATEPVVAPRPPRASA 570
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
492-567 |
1.78e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 41.09 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 492 RTGPKE----GTPGSPSETPGP---SPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPsETPGPSPAGPAGDEPAKAGE 564
Cdd:PHA03291 196 RLGPADvfvpATPRPTPRTTASpetTPTPSTTTSPPSTTIPAPSTTIAAPQAGTTPEAE-GTPAPPTPGGGEAPPANATP 274
|
...
gi 1622841658 565 AAE 567
Cdd:PHA03291 275 APE 277
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
326-579 |
2.03e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 326 VDEGPQPRSVEPQDAGPLERSQGDEAGGygedGPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS 405
Cdd:PHA03247 2750 TPGGPARPARPPTTAGPPAPAPPAAPAA----GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPA 2825
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 406 QGSLRTGTQEVGGQDPGEAVQPCPQPLGARVADKVRKRRRvdegsgdsavvasdgAQTLALAGCPAPSGYPKAGH-SENG 484
Cdd:PHA03247 2826 GPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRR---------------PPSRSPAAKPAAPARPPVRRlARPA 2890
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 485 VEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGE 564
Cdd:PHA03247 2891 VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPG 2970
|
250
....*....|....*
gi 1622841658 565 AAEVQDTEAKPSAKS 579
Cdd:PHA03247 2971 RVAVPRFRVPQPAPS 2985
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
495-573 |
2.35e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 495 PKEGTPGsPSETPGPSPAG---PAGDEPAESPSETPGPSPAGPAGDEPAESPSETPG---PSPAGPAGDEPAKAGEAAEV 568
Cdd:PRK14950 378 PVRPTPA-PSTRPKAAAAAnipPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRaaiPVDEKPKYTPPAPPKEEEKA 456
|
....*
gi 1622841658 569 QDTEA 573
Cdd:PRK14950 457 LIADG 461
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
480-579 |
2.44e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.03 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 480 HSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGD-- 557
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEde 116
|
90 100
....*....|....*....|....*.
gi 1622841658 558 -EPAKAGEAAEVQDTEAK---PSAKS 579
Cdd:PRK12270 117 vTPLRGAAAAVAKNMDASlevPTATS 142
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
500-577 |
3.03e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 3.03e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622841658 500 PGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPagPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAP--PAAAPPAPVAAPAAAAPAAAPAAA 441
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
340-577 |
3.36e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 340 AGPLERSQGDEAGGYGEDGPEPLSPKESKKRKLELSRREQPPTEPGPQSASEvekiALNLEGCALSQGSLRTGTQEVGgQ 419
Cdd:PRK07003 366 GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAA----AAATRAEAPPAAPAPPATADRG-D 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 420 DPGEAVQPCPQPLGARVADKVRKRRRVDEGSGDSAVVASDGAQTLALAGC-PAPSGYPKAGHSENGVEEDTEGRTGPKEG 498
Cdd:PRK07003 441 DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFePAPRAAAPSAATPAAVPDARAPAAASRED 520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 499 TPGSPSE-TPGPSPAGPAGDEPA-------------------------ESPSETPGPSPAGPAGDEPAESPSETPGPSPA 552
Cdd:PRK07003 521 APAAAAPpAPEARPPTPAAAAPAaraggaaaaldvlrnagmrvssdrgARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPR 600
|
250 260
....*....|....*....|....*
gi 1622841658 553 GPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PRK07003 601 ARAATGDAPPNGAARAEQAAESRGA 625
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
419-548 |
3.42e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.44 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 419 QDPGEAVQPCPQPLGARVAdkvrkRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSENGVEEDTEGRTGPKEG 498
Cdd:PHA03378 695 QPPPRAPTPMRPPAAPPGR-----AQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAA 769
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1622841658 499 TPGSPSETPGPSpAGPAgdePAESPSETPGPSPAGPAGDEPAE-SPSETPG 548
Cdd:PHA03378 770 APGAPTPQPPPQ-APPA---PQQRPRGAPTPQPPPQAGPTSMQlMPRAAPG 816
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
493-580 |
3.62e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.35 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 493 TGPKEGTPGSPSETPGPSPAgPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTE 572
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAP 470
|
....*...
gi 1622841658 573 AKPSAKSG 580
Cdd:PRK07764 471 AAAPEPTA 478
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
408-563 |
4.06e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.15 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 408 SLRTGTQEVGGQDPGEAVQPCPqpLGARVADKVRKRRRVDEGSGDSAVVASDGAQTLALAGCPAPSGYPKAGHSengvee 487
Cdd:PHA03307 34 DLLSGSQGQLVSDSAELAAVTV--VAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGS------ 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 488 DTEGRTGPKEGT-----PGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKA 562
Cdd:PHA03307 106 PTPPGPSSPDPPpptppPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARA 185
|
.
gi 1622841658 563 G 563
Cdd:PHA03307 186 P 186
|
|
| KLF14_N |
cd21576 |
N-terminal domain of Kruppel-like factor 14; Kruppel-like factor 14 (KLF14; also known as ... |
374-543 |
4.27e-03 |
|
N-terminal domain of Kruppel-like factor 14; Kruppel-like factor 14 (KLF14; also known as Krueppel-like factor 14 or basic transcription element-binding protein 5/BTEB5) is a protein that in humans is encoded by the KLF14 gene. KLF14 regulates the transcription of various genes, including TGFbetaRII (the type II receptor for TGFbeta). KLF14 is expressed in many tissues, lacks introns, and is subject to parent-specific expression. It also appears to be a master regulator of gene expression in adipose tissue. KLF14 is associated with coronary artery disease, hypercholesterolemia, and type 2 diabetes. KLF9, KLF10, KLF11, KLF13, KLF14, and KLF16 share a conserved alpha-helical motif AA/VXXL that mediates their binding to Sin3A and their activities as transcriptional repressors. KLF14 belongs to a family of proteins, called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Members of the KLF family can act as activators or repressors of transcription depending on cell and promoter context. KLFs regulate various cellular functions, such as proliferation, differentiation, and apoptosis, as well as the development and homeostasis of several types of tissue. In addition to the C-terminal DNA-binding domain, each KLF also has a unique N-terminal activation/repression domain that confers specificity and allows it to bind specifically to a certain partner, leading to distinct activities in vivo. This model represents the N-terminal domain of KLF14.
Pssm-ID: 409238 [Multi-domain] Cd Length: 195 Bit Score: 38.65 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 374 LSRREQPPTEPGPQSASEVEKIALN--LEGCALSQGSLRTGTQEVGGQDPGEAvQPCPQPLGARV-ADKvrkRRRVDEGS 450
Cdd:cd21576 24 LHRRAPDPEGAGGAAGSEVGAAPPEsaLPGPGPPGPAWVPPLLQVPAPSPGAG-GAAPHLLAASVlADL---RGGAGEGS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 451 GDSAVVAsdgaqTLALAGCPAP-SGYPKAGHSENGVEEDTEGRTGPkEGTPGSPsETPGPSPAGPAGDEPAESPSETPGP 529
Cdd:cd21576 100 REDSGEA-----PRASSGSSDPaRGSSPTLGSEPAPASGEDAVSGP-ESSFGAP-AIPSAPAAPGAPAVSGEVPGGAPGA 172
|
170
....*....|....
gi 1622841658 530 SPAGPAGDEPAESP 543
Cdd:cd21576 173 GPAPAAGPAPRRRP 186
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
478-562 |
4.56e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.60 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 478 AGHSENGVEEDTEGRTGPkEGTPGSPSETPGPSPAGPAGDEPAESPSEtPGPSPAGPAGDEPAESPSeTPGPSPAGPAGD 557
Cdd:NF041121 12 AAQMGRAAAPPSPEGPAP-TAASQPATPPPPAAPPSPPGDPPEPPAPE-PAPLPAPYPGSLAPPPPP-PPGPAGAAPGAA 88
|
....*
gi 1622841658 558 EPAKA 562
Cdd:NF041121 89 LPVRV 93
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
499-568 |
4.64e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.60 E-value: 4.64e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622841658 499 TPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSP-----AGPAGDEPAKAGEAAEV 568
Cdd:NF041121 15 MGRAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPgslapPPPPPPGPAGAAPGAAL 89
|
|
| OGFr_III |
pfam04680 |
Opioid growth factor receptor repeat; Proline-rich repeat found only in a human opioid growth ... |
502-521 |
4.92e-03 |
|
Opioid growth factor receptor repeat; Proline-rich repeat found only in a human opioid growth factor receptor.
Pssm-ID: 282527 Cd Length: 20 Bit Score: 34.54 E-value: 4.92e-03
|
| OGFr_III |
pfam04680 |
Opioid growth factor receptor repeat; Proline-rich repeat found only in a human opioid growth ... |
522-541 |
4.92e-03 |
|
Opioid growth factor receptor repeat; Proline-rich repeat found only in a human opioid growth factor receptor.
Pssm-ID: 282527 Cd Length: 20 Bit Score: 34.54 E-value: 4.92e-03
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
448-572 |
5.03e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 39.70 E-value: 5.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 448 EGSGDSAVVASdgAQTLALAGCPAPSGYPKAGHSENGVEEDTEgrtgPKEGTPGSPSETPGPSPAGPAGDEPAESPSETP 527
Cdd:PRK14951 367 AAAAEAAAPAE--KKTPARPEAAAPAAAPVAQAAAAPAPAAAP----AAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAA 440
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1622841658 528 GPSPAGPAGDEPAESPSET--------PGPSPAgPAGDEPAKAGEAAEVQDTE 572
Cdd:PRK14951 441 APAAVALAPAPPAQAAPETvaipvrvaPEPAVA-SAAPAPAAAPAAARLTPTE 492
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
499-582 |
5.13e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 39.79 E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 499 TPGSPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSAK 578
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDE 440
|
....
gi 1622841658 579 SGKA 582
Cdd:PRK14950 441 KPKY 444
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
467-577 |
9.76e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 38.89 E-value: 9.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622841658 467 AGCPAPSGYPKAGHSENGVEEdTEGRTGPKEGTPGSpseTPGPSPAGPAGDEPAESPSETPGPSPAGPAGDEPAESPSET 546
Cdd:PRK14959 378 ASAPSGSAAEGPASGGAATIP-TPGTQGPQGTAPAA---GMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSGIPPRPA 453
|
90 100 110
....*....|....*....|....*....|.
gi 1622841658 547 PGPSPAGPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PRK14959 454 PRMPEASPVPGAPDSVASASDAPPTLGDPSD 484
|
|
| PHA00666 |
PHA00666 |
putative protease |
504-577 |
9.99e-03 |
|
putative protease
Pssm-ID: 222808 [Multi-domain] Cd Length: 233 Bit Score: 38.10 E-value: 9.99e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622841658 504 SETPGPSPAGPAGDEPAESPSETPGPS--PAGPAGDEPaespseTPGPSPAGPAGDEPAKAGEAAEVQDTEAKPSA 577
Cdd:PHA00666 14 NEQPGDGGSQPAASEPAAGAGDNPAPQgdPTQEEGDKP------QPAAGADKPEGDKKADGDKPEEKKPGEKPEGA 83
|
|
| |
