|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
161-828 |
2.55e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 2.55e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 161 QLHAFHQSLRDLSSEQIRLGDDFNRELSRRSRSDA---ETKRTLEELTEKLNEAQKqevVSDRVERRLQELEREMRTERE 237
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEkleELRLEVSELEEEIEELQK---ELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 238 LVERRQDQLGLMSLQLQEALKKQEAKADEhegaiknkLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQL 317
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEE--------LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 318 TIAEGDRKGLQHQVSQISKQQSnYQDEQGEDWRFRRgvEREKQDLEKQMSDLrVQLNFNAMASELEEVKRCMERKDKEKA 397
Cdd:TIGR02168 382 ETLRSKVAQLELQIASLNNEIE-RLEARLERLEDRR--ERLQQEIEELLKKL-EEAELKELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 398 HLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEA-ERKHADLQ-------------------ISELTRHAEDATK 457
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERlQENLEGFSegvkallknqsglsgilgvLSELISVDEGYEA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 458 QAEQYLSELQQS-------------EALKEEAEKRR----------------EDLKLKAQESIRQWKLKHKK-------- 500
Cdd:TIGR02168 538 AIEAALGGRLQAvvvenlnaakkaiAFLKQNELGRVtflpldsikgteiqgnDREILKNIEGFLGVAKDLVKfdpklrka 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 501 -------------LERALEKQSETVDELT--------------------GKNNQIL---KEKDELKTQMYAALQQIENLR 544
Cdd:TIGR02168 618 lsyllggvlvvddLDNALELAKKLRPGYRivtldgdlvrpggvitggsaKTNSSILerrREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 545 KELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQ 624
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEEL 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 625 AQDKAKLLEMQESIKDLSairaDLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSS 704
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLK----EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED 853
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 705 LQSVKTKHEQ------NIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKK 778
Cdd:TIGR02168 854 IESLAAEIEEleelieELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 1622956496 779 LKLKYQCLKDQLEEREKhISIEE--EHLRRTEEARLQLKDQLLCLETEQESI 828
Cdd:TIGR02168 934 LEVRIDNLQERLSEEYS-LTLEEaeALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
196-839 |
8.88e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.76 E-value: 8.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 196 ETKRTLEELTEKLNEAqkqEVVSDRVERRLQELEREMRTE---RELVERRQD-QLGLMSLQLQEALKKQEAKADEHEgAI 271
Cdd:COG1196 176 EAERKLEATEENLERL---EDILGELERQLEPLERQAEKAeryRELKEELKElEAELLLLKLRELEAELEELEAELE-EL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 272 KNKLIQTETEKNQLEQELELSRKLLNQSEgsretllHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDwrf 351
Cdd:COG1196 252 EAELEELEAELAELEAELEELRLELEELE-------LELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEEL--- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 352 rrgvEREKQDLEKQMSDLRVQLnfnamaseleevkrcmERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHF 431
Cdd:COG1196 322 ----EEELAELEEELEELEEEL----------------EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 432 DTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQEsirqwklkhkkLERALEKQSET 511
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE-----------EEEALEEAAEE 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 512 VDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKshqadlELEVKNSLDTIHR 591
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVK------AALLLAGLRGLAG 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 592 LESELkkqskIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRA------DLANKLAEEERAKKAVLKD 665
Cdd:COG1196 525 AVAVL-----IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAtflpldKIRARAALAAALARGAIGA 599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 666 LSDLTAQAKSRDEETATVITQLKLERDVHQRELkdLTSSLQSVKTKHEQNIQEL-MKHFKKEKSEAENHIRTLKAESLEE 744
Cdd:COG1196 600 AVDLVASDLREADARYYVLGDTLLGRTLVAARL--EAALRRAVTLAGRLREVTLeGEGGSAGGSLTGGSRRELLAALLEA 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 745 KNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETE 824
Cdd:COG1196 678 EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP 757
|
650
....*....|....*
gi 1622956496 825 QESILGVIGKEIDAA 839
Cdd:COG1196 758 EPPDLEELERELERL 772
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
185-765 |
1.44e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 1.44e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 185 RELSRRSRSDAETKRTLEELTEKLNEAQKQEvvsDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKA 264
Cdd:COG1196 225 LEAELLLLKLRELEAELEELEAELEELEAEL---EELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 265 DEHEgAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDE 344
Cdd:COG1196 302 QDIA-RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 345 QGEDWRFRRGVEREKQDLEKQMSDLRVQLnfnamASELEEvkrcMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRL 424
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQLEELEEAE-----EALLER----LERLEEELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 425 KEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERA 504
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIG 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 505 LEKQSETVDE--LTGKNNQILKEKDElktqmyAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEV 582
Cdd:COG1196 532 VEAAYEAALEaaLAAALQNIVVEDDE------VAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 583 knslDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAV 662
Cdd:COG1196 606 ----SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAEL 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 663 LKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQsvktKHEQNIQELMKHFKKEKSEAENHIRTLKAESL 742
Cdd:COG1196 682 EELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEA----LEEQLEAEREELLEELLEEEELLEEEALEELP 757
|
570 580
....*....|....*....|...
gi 1622956496 743 EEKNMAKVhRGQLDKLKSQCDRL 765
Cdd:COG1196 758 EPPDLEEL-ERELERLEREIEAL 779
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
191-810 |
1.65e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 79.03 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 191 SRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQlglMSLQLQEALKKQEAKADEHEGA 270
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAE---DARKAEEARKAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 271 IKNKLIQTETEKNQLEQELELSRKLLnqsEGSRETLLHQVEELRAqltiAEGDRKglqhqVSQISKQQSNYQDEQGEDWR 350
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAARKAE---EVRKAEELRKAEDARK----AEAARK-----AEEERKAEEARKAEDAKKAE 1227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 351 FRRGVEREKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNH 430
Cdd:PTZ00121 1228 AVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEA 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 431 FDTCEAERKHADL--QISELTRHAEDATKQAEQylsELQQSEALKEEAEKRREDLKlKAQESIRQWKLK---HKKLERAL 505
Cdd:PTZ00121 1308 KKKAEEAKKADEAkkKAEEAKKKADAAKKKAEE---AKKAAEAAKAEAEAAADEAE-AAEEKAEAAEKKkeeAKKKADAA 1383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 506 EKQSETV---DELTGKNNQILKEKDELKTQMyAALQQIENLRKELNDV-----LTKRALQE---EELHSKEEKLRdiKSH 574
Cdd:PTZ00121 1384 KKKAEEKkkaDEAKKKAEEDKKKADELKKAA-AAKKKADEAKKKAEEKkkadeAKKKAEEAkkaDEAKKKAEEAK--KAE 1460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 575 QADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEeiaELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAE 654
Cdd:PTZ00121 1461 EAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADE---AKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD 1537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 655 EERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKdltssLQSVKTKHEQNIQELMKHFKKEKSEAENHI 734
Cdd:PTZ00121 1538 EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRK-----AEEAKKAEEARIEEVMKLYEEEKKMKAEEA 1612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 735 RT-----LKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEE 809
Cdd:PTZ00121 1613 KKaeeakIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
|
.
gi 1622956496 810 A 810
Cdd:PTZ00121 1693 A 1693
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
406-834 |
4.39e-14 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 76.98 E-value: 4.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 406 LTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKL 485
Cdd:TIGR04523 216 LESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKS 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 486 KAQESIRQWKLK-HKKLERALEKQSETVDELTGKNNQILKEKDELKtqmyaalQQIENLRKELNDVLTKRALQEEELHSK 564
Cdd:TIGR04523 296 EISDLNNQKEQDwNKELKSELKNQEKKLEEIQNQISQNNKIISQLN-------EQISQLKKELTNSESENSEKQRELEEK 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 565 EEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSai 644
Cdd:TIGR04523 369 QNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLT-- 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 645 radlanklaEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVkTKHEQNIQELMKHFK 724
Cdd:TIGR04523 447 ---------NQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL-NEEKKELEEKVKDLT 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 725 KEKSEAENHIRTLKAE---------SLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREK 795
Cdd:TIGR04523 517 KKISSLKEKIEKLESEkkekeskisDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEK 596
|
410 420 430
....*....|....*....|....*....|....*....
gi 1622956496 796 HISIEEEHLRRTEEARLQLKDQLLCLETEQESILGVIGK 834
Cdd:TIGR04523 597 EKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKN 635
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
195-817 |
8.09e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 76.72 E-value: 8.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 195 AETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKnk 274
Cdd:PTZ00121 1196 AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIK-- 1273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 275 liqteTEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQltiAEGDRKglqhqvSQISKQQSNYQDEQGEdwrfrrg 354
Cdd:PTZ00121 1274 -----AEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK---AEEAKK------ADEAKKKAEEAKKKAD------- 1332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 355 vEREKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEK--QQLQMLDRLKEIQNHFD 432
Cdd:PTZ00121 1333 -AAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKadEAKKKAEEDKKKADELK 1411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 433 TCEAERKHAD--LQISELTRHAEDATKQAEqylsELQQSEALKEEAEKRR--EDLKLKAQESIRQWKLKHKKLERalekq 508
Cdd:PTZ00121 1412 KAAAAKKKADeaKKKAEEKKKADEAKKKAE----EAKKADEAKKKAEEAKkaEEAKKKAEEAKKADEAKKKAEEA----- 1482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 509 sETVDELTGKNNQILKEKDELKTQMYAAlQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADlelEVKNSLDT 588
Cdd:PTZ00121 1483 -KKADEAKKKAEEAKKKADEAKKAAEAK-KKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD---ELKKAEEL 1557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 589 IHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSD 668
Cdd:PTZ00121 1558 KKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQ 1637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 669 LTA----------QAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQELMKHFKKEKSEAENHIRTLK 738
Cdd:PTZ00121 1638 LKKkeaeekkkaeELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 739 AESL---EEKNMAKVHrgQLDKLKSQCDRLTEELTQNENENKKL-KLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQL 814
Cdd:PTZ00121 1718 AEELkkaEEENKIKAE--EAKKEAEEDKKKAEEAKKDEEEKKKIaHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRME 1795
|
...
gi 1622956496 815 KDQ 817
Cdd:PTZ00121 1796 VDK 1798
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
414-745 |
1.13e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.87 E-value: 1.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 414 EKQQLQML-DRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQ----SEALKEEAEKRREDLKLKAQ 488
Cdd:TIGR02169 672 EPAELQRLrERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQleqeEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 489 EsIRQWKLKHKKLERALEKQSETVDELTGKNN------------QILKEKDELKTQMYAALQQIENLRKELNDVLTKRAL 556
Cdd:TIGR02169 752 E-IENVKSELKELEARIEELEEDLHKLEEALNdlearlshsripEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY 830
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 557 QEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQE 636
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 637 SIKDLSAIRADLANKLAeeerAKKAVLKDLSDLTAQAKSRDEETAtVITQLKLERDVHQRELkdltSSLQSVKTKHEQNI 716
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLE----ALEEELSEIEDPKGEDEEIPEEEL-SLEDVQAELQRVEEEI----RALEPVNMLAIQEY 981
|
330 340 350
....*....|....*....|....*....|....
gi 1622956496 717 QELMKHF-----KKEKSEAENHIRTLKAESLEEK 745
Cdd:TIGR02169 982 EEVLKRLdelkeKRAKLEEERKAILERIEEYEKK 1015
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
161-656 |
2.85e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.59 E-value: 2.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 161 QLHAFHQSLRDLSSEQIRLGDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVE 240
Cdd:COG1196 282 ELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELA 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 241 RRQDQLGLMSLQLQEALKKQEAKADEH---EGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQL 317
Cdd:COG1196 362 EAEEALLEAEAELAEAEEELEELAEELleaLRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 318 TIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNA-MASELEEVKRCMERKDKEK 396
Cdd:COG1196 442 EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAdYEGFLEGVKAALLLAGLRG 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 397 AHLASQVEI----------LTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKH--ADLQISELTRHAEDATKQAEQYLS 464
Cdd:COG1196 522 LAGAVAVLIgveaayeaalEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATflPLDKIRARAALAAALARGAIGAAV 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 465 ELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERAL-EKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENL 543
Cdd:COG1196 602 DLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLaGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAEL 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 544 RKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKS 623
Cdd:COG1196 682 EELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD 761
|
490 500 510
....*....|....*....|....*....|...
gi 1622956496 624 QAQDKAKLLEMQESIKDLSAIradlaNKLAEEE 656
Cdd:COG1196 762 LEELERELERLEREIEALGPV-----NLLAIEE 789
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
181-956 |
3.19e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.32 E-value: 3.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 181 DDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQevvsdrverrLQELEREMRTERELVERRQDQLGLMSlQLQEALKKQ 260
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEK----------LEELRLEVSELEEEIEELQKELYALA-NEISRLEQQ 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 261 EAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLqhqvsqisKQQSN 340
Cdd:TIGR02168 304 KQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEEL--------ESRLE 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 341 YQDEQGEdwRFRRGVEREKQDLEKQMSdlrvqlnfnamasELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQM 420
Cdd:TIGR02168 376 ELEEQLE--TLRSKVAQLELQIASLNN-------------EIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 421 -LDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQsealKEEAEKRREDLKLKAQESIRQWKLKHK 499
Cdd:TIGR02168 441 eLEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQS 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 500 KLERALEKQSE--TVDE---------LTGKNNQILKEKDElktqmyAALQQIENLRKELN--------DVLTKRALQEEE 560
Cdd:TIGR02168 517 GLSGILGVLSEliSVDEgyeaaieaaLGGRLQAVVVENLN------AAKKAIAFLKQNELgrvtflplDSIKGTEIQGND 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 561 LHSKEEK------LRDIKSHQADLELEVKNSLDTIH---RLESELKKQSKIQSQMK--------------VEKAHLEEEI 617
Cdd:TIGR02168 591 REILKNIegflgvAKDLVKFDPKLRKALSYLLGGVLvvdDLDNALELAKKLRPGYRivtldgdlvrpggvITGGSAKTNS 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 618 AELKKSQAQDK--AKLLEMQESIKDLSAIRADLANK---LAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERD 692
Cdd:TIGR02168 671 SILERRREIEEleEKIEELEEKIAELEKALAELRKEleeLEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 693 VHQRELKDLTSSLQSVKTKHEQNIQELmKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQN 772
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEEL-AEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESL 829
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 773 ENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESIlgvigkeidaacktfskdsmeklk 852
Cdd:TIGR02168 830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASL------------------------ 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 853 vfssgpdihydpHRWLAESKTKLQWLCEELKERENREKNLRHQLMLCRQ---QVRNVTEHKESELQCLFQQI-ERQEQLL 928
Cdd:TIGR02168 886 ------------EEALALLRSELEELSEELRELESKRSELRRELEELREklaQLELRLEGLEVRIDNLQERLsEEYSLTL 953
|
810 820
....*....|....*....|....*...
gi 1622956496 929 DEIHREKRDLLEETQRKDEEMGSLQPKL 956
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
201-746 |
9.22e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 72.75 E-value: 9.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 201 LEELTEKLNEAQKQ----EVVSDRVERRLQELEREMRTERElvERRQDQLGLMSL----QLQEALKKQEAKADEHEGAIK 272
Cdd:TIGR04523 154 LEKLNNKYNDLKKQkeelENELNLLEKEKLNIQKNIDKIKN--KLLKLELLLSNLkkkiQKNKSLESQISELKKQNNQLK 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 273 NKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWrfR 352
Cdd:TIGR04523 232 DNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDW--N 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 353 RGVEREKQDLEKQMSDLRVQLNFNamASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQqlqmldrLKEIQNHFD 432
Cdd:TIGR04523 310 KELKSELKNQEKKLEEIQNQISQN--NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNE-------IEKLKKENQ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 433 TCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLK---LKAQESIR-------QWKLKHKKLE 502
Cdd:TIGR04523 381 SYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKetiIKNNSEIKdltnqdsVKELIIKNLD 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 503 RALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEV 582
Cdd:TIGR04523 461 NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 583 KNSLDTIHRLESELKKqskiqSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAV 662
Cdd:TIGR04523 541 SDLEDELNKDDFELKK-----ENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSL 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 663 LKDLSDltaqAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHE-------------QNIQELMKHFKKEKS- 728
Cdd:TIGR04523 616 EKELEK----AKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPeiikkikesktkiDDIIELMKDWLKELSl 691
|
570 580
....*....|....*....|..
gi 1622956496 729 ----EAENHIRTLKAESLEEKN 746
Cdd:TIGR04523 692 hykkYITRMIRIKDLPKLEEKY 713
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
383-985 |
9.78e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 73.25 E-value: 9.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 383 EEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTC---EAERKHADLQISELTRHAEDATKQA 459
Cdd:PTZ00121 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAkkaEEERNNEEIRKFEEARMAHFARRQA 1270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 460 EQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLE-RALEKQSETVDELTGKNNQILKEKDELKTQMYAALQ 538
Cdd:PTZ00121 1271 AIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEaKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKA 1350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 539 QIENLRKELNDvlTKRALQEEELHSKEEKLrdiKSHQADLELEVKNSLDTIHRLESELKKQSKiqsqmKVEKAHLEEEIA 618
Cdd:PTZ00121 1351 EAEAAADEAEA--AEEKAEAAEKKKEEAKK---KADAAKKKAEEKKKADEAKKKAEEDKKKAD-----ELKKAAAAKKKA 1420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 619 ELKKSQAQDKAKLLEMQESIKDlsAIRADLANKLAEEER-AKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRE 697
Cdd:PTZ00121 1421 DEAKKKAEEKKKADEAKKKAEE--AKKADEAKKKAEEAKkAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKK 1498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 698 LKDLTSSLQSVKTKHEQNIQELMKHfKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENK 777
Cdd:PTZ00121 1499 ADEAKKAAEAKKKADEAKKAEEAKK-ADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKN 1577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 778 KLKLKYQCLKDQLEER--------EKHISIEEEHLRRTEEARLQlKDQLLCLETEQESILGVIGKEIDaacktfSKDSME 849
Cdd:PTZ00121 1578 MALRKAEEAKKAEEARieevmklyEEEKKMKAEEAKKAEEAKIK-AEELKKAEEEKKKVEQLKKKEAE------EKKKAE 1650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 850 KLKVFSSGPDIHYDPHRWLAESKTKlqwLCEELKERENREKNLRHQLMLCRQQVRNVTE--HKESELQCLFQQIERQEQL 927
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKK---KAEEAKKAEEDEKKAAEALKKEAEEAKKAEElkKKEAEEKKKAEELKKAEEE 1727
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 928 LDEIHREKRDLLEETQRKDEEM--GSLQPKLLFKLPPWEDASQTAVRNQSEAQLEEKADR 985
Cdd:PTZ00121 1728 NKIKAEEAKKEAEEDKKKAEEAkkDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE 1787
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
473-808 |
1.56e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.28 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 473 KEEAEKRRED-------LKLKAQESIRQwklkhkkLERaLEKQSETvdelTGKNNQILKEKDELKTQMYA-----ALQQI 540
Cdd:COG1196 174 KEEAERKLEAteenlerLEDILGELERQ-------LEP-LERQAEK----AERYRELKEELKELEAELLLlklreLEAEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 541 ENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAEL 620
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 621 KKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKD 700
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 701 LTSSLQsvktkHEQNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLK 780
Cdd:COG1196 402 LEELEE-----AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
330 340
....*....|....*....|....*...
gi 1622956496 781 LKYQCLKDQLEEREKHISIEEEHLRRTE 808
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
445-795 |
4.57e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.86 E-value: 4.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 445 ISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKklERALEKQSetvdeLTGKNNQILK 524
Cdd:TIGR02168 167 ISKYKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAE--LRELELAL-----LVLRLEELRE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 525 EKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKShqadlelEVKNSLDTIHRLESELKKQSKIQS 604
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQK-------ELYALANEISRLEQQKQILRERLA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 605 QMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAksrdEETATVI 684
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL----ETLRSKV 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 685 TQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQELMKHFKK----EKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKS 760
Cdd:TIGR02168 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKleeaELKELQAELEELEEELEELQEELERLEEALEELRE 468
|
330 340 350
....*....|....*....|....*....|....*
gi 1622956496 761 QCDRLTEELTQNENENKKLKLKYQCLKDQLEEREK 795
Cdd:TIGR02168 469 ELEEAEQALDAAERELAQLQARLDSLERLQENLEG 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
311-686 |
6.92e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.09 E-value: 6.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 311 EELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEqgedwrfRRGVEREKQDLEKQMSDLRVQLnfnamaseleevkrcmE 390
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEE-------LEQLRKELEELSRQISALRKDL----------------A 736
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 391 RKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQ------------ 458
Cdd:TIGR02168 737 RLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAldelraeltlln 816
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 459 --AEQYLSELQQSEALKEEAEKRREDLklkaQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAA 536
Cdd:TIGR02168 817 eeAANLRERLESLERRIAATERRLEDL----EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 537 LQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTI---HRLESELKKQSKIQSQMKVEKAhl 613
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLseeYSLTLEEAEALENKIEDDEEEA-- 970
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 614 EEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQ 686
Cdd:TIGR02168 971 RRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERFKDTFDQVNE 1043
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
167-707 |
9.23e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 9.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 167 QSLRDLSSEQIRLG-DDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEvvsDRVERRLQELEREMRTERELVERRQDQ 245
Cdd:COG1196 262 LAELEAELEELRLElEELELELEEAQAEEYELLAELARLEQDIARLEERR---RELEERLEELEEELAELEEELEELEEE 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 246 LglmslqlqEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRK 325
Cdd:COG1196 339 L--------EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 326 GLQHQVSQISKQQSNYQDEQgedwrfrrgVEREKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHLASQVEI 405
Cdd:COG1196 411 ALLERLERLEEELEELEEAL---------AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 406 LTRELENgEKQQLQMLDRLKEIQNHFDTcEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKL 485
Cdd:COG1196 482 LLEELAE-AAARLLLLLEAEADYEGFLE-GVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVA 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 486 KAQESIrqwkLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLR-KELNDVLTKRALQEEELHSK 564
Cdd:COG1196 560 AAAIEY----LKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARyYVLGDTLLGRTLVAARLEAA 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 565 EEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAI 644
Cdd:COG1196 636 LRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEE 715
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 645 RADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQS 707
Cdd:COG1196 716 RLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
192-732 |
9.33e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.78 E-value: 9.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 192 RSDAETKRTLEELTEKLNEAQKQevvSDRVERRLQELEREMRTERELVERRQDQLglmslqlqealkkqeAKADEHEGAI 271
Cdd:PTZ00121 1308 KKKAEEAKKADEAKKKAEEAKKK---ADAAKKKAEEAKKAAEAAKAEAEAAADEA---------------EAAEEKAEAA 1369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 272 KNKLIQTETEKNQLEQELELSRKlLNQSEGSRETLLHQVEELRAQltiAEGDRKGLQHQVSQISKQQSNYQDEQGEDwrf 351
Cdd:PTZ00121 1370 EKKKEEAKKKADAAKKKAEEKKK-ADEAKKKAEEDKKKADELKKA---AAAKKKADEAKKKAEEKKKADEAKKKAEE--- 1442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 352 rrgvEREKQDLEKQMSDLRVQLNFNAMAselEEVKRCMERkdKEKAHLASQVEILTRELENGEKQ--QLQMLDRLKEIQN 429
Cdd:PTZ00121 1443 ----AKKADEAKKKAEEAKKAEEAKKKA---EEAKKADEA--KKKAEEAKKADEAKKKAEEAKKKadEAKKAAEAKKKAD 1513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 430 HFDTCEAERKHADLQISELTRHAEDATKQAE-QYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQ 508
Cdd:PTZ00121 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEkKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR 1593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 509 SETVDELTGKNNQILKE---KDELKTQMYAALQQIENLRKELNDVLTKRALQE---EELHSKEEKLRDIKSHQADLELEV 582
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEeakKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKkkaEELKKAEEENKIKAAEEAKKAEED 1673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 583 KNSLDTIHRLESELKKQSKIQSQMKVEKAHLEeeiaELKKSQAQDKAKLLEMQESiKDLSAIRADLANKLAEEERAKkav 662
Cdd:PTZ00121 1674 KKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE----ELKKKEAEEKKKAEELKKA-EEENKIKAEEAKKEAEEDKKK--- 1745
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622956496 663 lkdlsdltAQAKSRDEETATVITQLKLERDVHQRELKDLTSSL--QSVKTKHEQNIQELMKHFKKEKSEAEN 732
Cdd:PTZ00121 1746 --------AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRMEVDKKIKDIFDNFAN 1809
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
196-1011 |
1.47e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.93 E-value: 1.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 196 ETKRTLEELTEKLneaQKQEVVSDRVERRLQELEREMRTE---REL-VERRQDQLGLMSLQLQEALKKQEAKADEhEGAI 271
Cdd:TIGR02168 176 ETERKLERTRENL---DRLEDILNELERQLKSLERQAEKAeryKELkAELRELELALLVLRLEELREELEELQEE-LKEA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 272 KNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRF 351
Cdd:TIGR02168 252 EEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 352 RRGVEREKQDLEKQMSDLRVQLN-FNAMASELEEVKRCMERK--DKEKAH--LASQVEILTRELENGEKQQLQMLDRLKE 426
Cdd:TIGR02168 332 LDELAEELAELEEKLEELKEELEsLEAELEELEAELEELESRleELEEQLetLRSKVAQLELQIASLNNEIERLEARLER 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 427 IQNHFDTCEAERKHADLQISELTRHAEDAT-KQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLE--- 502
Cdd:TIGR02168 412 LEDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQarl 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 503 RALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQI---ENLRKELNDVLTKRaLQEEELHSKEEKLRDIkshqadlE 579
Cdd:TIGR02168 492 DSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELIsvdEGYEAAIEAALGGR-LQAVVVENLNAAKKAI-------A 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 580 LEVKNSLDTIHRLESELKKQSKIQSQmKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLA---EEE 656
Cdd:TIGR02168 564 FLKQNELGRVTFLPLDSIKGTEIQGN-DREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALElakKLR 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 657 RAKKAVLKDLSDLTAQAKS--RDEETATVITQLKLERDVHQRELKDLTSSLQSVktkhEQNIQELmkhfKKEKSEAENHI 734
Cdd:TIGR02168 643 PGYRIVTLDGDLVRPGGVItgGSAKTNSSILERRREIEELEEKIEELEEKIAEL----EKALAEL----RKELEELEEEL 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 735 RTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQL 814
Cdd:TIGR02168 715 EQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQL 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 815 KDQLLCLETEqesilgvigkeidaacktfskdsmeklkvfssgpdihydphrwLAESKTKLQWLCEELKERENREKNLRH 894
Cdd:TIGR02168 795 KEELKALREA-------------------------------------------LDELRAELTLLNEEAANLRERLESLER 831
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 895 QLMLCRQQVRNVTEHKES---ELQCLFQQIERQEQLLDEIHREKRDLLEETQRKDEEMGSLQPKLlfklppwedasqtav 971
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEElseDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSEL--------------- 896
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1622956496 972 rNQSEAQLEEKADRVIALETSTRVALDHLESVPEKLSLLE 1011
Cdd:TIGR02168 897 -EELSEELRELESKRSELRRELEELREKLAQLELRLEGLE 935
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
221-815 |
2.37e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.22 E-value: 2.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 221 VERRLQELEREMRTERELVERRQDQLGLMSlqlQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSE 300
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQLEALK---SESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQ 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 301 GSRETLLHQVEELRAQLtiaegdrkglqhqVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMsdlrVQLNfnamaS 380
Cdd:pfam15921 299 SQLEIIQEQARNQNSMY-------------MRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQL----VLAN-----S 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 381 ELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHfDTCEAerkhadLQISELTRHAEDATKQAE 460
Cdd:pfam15921 357 ELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDR-DTGNS------ITIDHLRRELDDRNMEVQ 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 461 QYLSELQqseALKEEAEKRREDLKLKAQ---ESIRQWKLKHKKLERALEKQSETVDELTGKNnQILKEKDELKTQMYAAL 537
Cdd:pfam15921 430 RLEALLK---AMKSECQGQMERQMAAIQgknESLEKVSSLTAQLESTKEMLRKVVEELTAKK-MTLESSERTVSDLTASL 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 538 QQIENLRKELNDVLTKR------ALQE-EELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQ----- 605
Cdd:pfam15921 506 QEKERAIEATNAEITKLrsrvdlKLQElQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQhgrta 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 606 --MKVEKAHLEEEI-------AELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKS- 675
Cdd:pfam15921 586 gaMQVEKAQLEKEIndrrlelQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTs 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 676 --------------------RDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQELMkhfkkekseaenhir 735
Cdd:pfam15921 666 rnelnslsedyevlkrnfrnKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAM--------------- 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 736 tlkaeSLEEKNMAKvhRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLE--EREKHISIEEEHLRRTEEARLQ 813
Cdd:pfam15921 731 -----GMQKQITAK--RGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELStvATEKNKMAGELEVLRSQERRLK 803
|
..
gi 1622956496 814 LK 815
Cdd:pfam15921 804 EK 805
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
154-598 |
4.52e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 4.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 154 QETDDMTQLHAFHQSLRDLSSEQIRLGDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMR 233
Cdd:COG1196 331 ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 234 TERELVERRQDQLGLMSLQLQEALKKQEAKAdEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEEL 313
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEE-EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA 489
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 314 RAQLTIAEGDRKGLQHQVSQISKQQSNyqDEQGEDWRF---RRGVEREKQDLEKQMSDLRVQLNFNAMASELEEVKRCME 390
Cdd:COG1196 490 AARLLLLLEAEADYEGFLEGVKAALLL--AGLRGLAGAvavLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLK 567
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 391 RKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDatkqAEQYLSELQQSE 470
Cdd:COG1196 568 AAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR----LEAALRRAVTLA 643
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 471 ALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDV 550
Cdd:COG1196 644 GRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEE 723
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1622956496 551 LTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKK 598
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
202-733 |
1.20e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.86 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 202 EELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERrqdqlglmslqlQEALKKQEAKADEHEGAIKNKLIQTETE 281
Cdd:PRK03918 200 KELEEVLREINEISSELPELREELEKLEKEVKELEELKEE------------IEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 282 KNQLE---QELELSRKLLNQSEGS----------RETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSnyqdEQGED 348
Cdd:PRK03918 268 IEELKkeiEELEEKVKELKELKEKaeeyiklsefYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE----RLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 349 WRFRRGVEREKQDLEKQmsdlrvqlnfnamASELEEVKRCMERKDKEKAHLAS-QVEILTRELENGEKQQLQMLDRLKEI 427
Cdd:PRK03918 344 KKKLKELEKRLEELEER-------------HELYEEAKAKKEELERLKKRLTGlTPEKLEKELEELEKAKEEIEEEISKI 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 428 QNHFDTCEAERKHADLQISELTR------------HAEDATKQAEQYLSELQQSEALKEEAEKRREDLK--LKAQESIRQ 493
Cdd:PRK03918 411 TARIGELKKEIKELKKAIEELKKakgkcpvcgrelTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRkeLRELEKVLK 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 494 WKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKS 573
Cdd:PRK03918 491 KESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEE 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 574 HQADLELEVKN----SLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLA 649
Cdd:PRK03918 571 ELAELLKELEElgfeSVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELE 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 650 NKLA----EEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKT--KHEQNIQELMKHF 723
Cdd:PRK03918 651 ELEKkyseEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKleKALERVEELREKV 730
|
570
....*....|
gi 1622956496 724 KKEKSEAENH 733
Cdd:PRK03918 731 KKYKALLKER 740
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
381-710 |
1.39e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.86 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 381 ELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQlQMLDRLKEIQ-----NHFDTCEAERKHADLQISELTRHAEDA 455
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQ-ALLKEKREYEgyellKEKEALERQKEAIERQLASLEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 456 TKQAEQYLSELQQSEALKEEAEKRREDL----KLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKt 531
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLgeeeQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLL- 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 532 qmyaalQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDT-------IHRLESELKKQSKIQS 604
Cdd:TIGR02169 336 ------AEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDElkdyrekLEKLKREINELKRELD 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 605 QMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAiradlanKLAEEERAKKAVLKDLSDLTAQAKSRDEEtatvI 684
Cdd:TIGR02169 410 RLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKAL-------EIKKQEWKLEQLAADLSKYEQELYDLKEE----Y 478
|
330 340
....*....|....*....|....*.
gi 1622956496 685 TQLKLERDVHQRELKDLTSSLQSVKT 710
Cdd:TIGR02169 479 DRVEKELSKLQRELAEAEAQARASEE 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
195-1015 |
6.39e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 6.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 195 AETKRTLEELTEKLNEAQKQ-EVVSDRVERRLQELEReMRTERELVERRQD-QLGLMSLQLQEALKKQEAkADEHEGAIK 272
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENiERLDLIIDEKRQQLER-LRREREKAERYQAlLKEKREYEGYELLKEKEA-LERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 273 NKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELraqltiAEGDRKGLQHQVSQISKQQSNYQDEQGEDwrfr 352
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL------GEEEQLRVKEKIGELEAEIASLERSIAEK---- 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 353 rgvEREKQDLEKQMSDLRVQLnfNAMASELEEVKRCMERKDKEKAHLASQVEILTRELEngekqqlQMLDRLKEIQNHFD 432
Cdd:TIGR02169 314 ---ERELEDAEERLAKLEAEI--DKLLAEIEELEREIEEERKRRDKLTEEYAELKEELE-------DLRAELEEVDKEFA 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 433 TCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEAlkeeaekRREDLKLKAqESIRQwklKHKKLERALEKQSETV 512
Cdd:TIGR02169 382 ETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSE-------ELADLNAAI-AGIEA---KINELEEEKEDKALEI 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 513 DELTGKNNQILKEKDELKtqmyaalQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQ---ADLELEVKNSLDTI 589
Cdd:TIGR02169 451 KKQEWKLEQLAADLSKYE-------QELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVrggRAVEEVLKASIQGV 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 590 HRLESELKKqSKIQSQMKVEKAH--------------LEEEIAELKKSQAQDKA--KLLEMQESIKDLSAIRADLANKLA 653
Cdd:TIGR02169 524 HGTVAQLGS-VGERYATAIEVAAgnrlnnvvveddavAKEAIELLKRRKAGRATflPLNKMRDERRDLSILSEDGVIGFA 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 654 --------EEERAKKAVLKD---LSDLTA---------------------------QAKSRDEETATVITQLKLERDVHQ 695
Cdd:TIGR02169 603 vdlvefdpKYEPAFKYVFGDtlvVEDIEAarrlmgkyrmvtlegelfeksgamtggSRAPRGGILFSRSEPAELQRLRER 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 696 RE-LKDLTSSLQSVKTKHEQNIQEL---MKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQ 771
Cdd:TIGR02169 683 LEgLKRELSSLQSELRRIENRLDELsqeLSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 772 NENENKKLKLKYQCLKDQLEEREKHIS-------------IEEEHLR---RTEEARLQLKDQLLCLETEQESILGVIGKE 835
Cdd:TIGR02169 763 LEARIEELEEDLHKLEEALNDLEARLShsripeiqaelskLEEEVSRieaRLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 836 IDAackTFSKDSMEKLkvfssgpdihydphrwLAESKTKLQWLCEELKERENREKNLRHQLMLCRQQVRNVTEHK---ES 912
Cdd:TIGR02169 843 IDL---KEQIKSIEKE----------------IENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLrelER 903
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 913 ELQCLFQQIERQEQLLDEIHREKRDLLEETQRKDEEMGSLQPkllfklPPWEDASQTAVrnqsEAQLEEKADRVIALETS 992
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEE------IPEEELSLEDV----QAELQRVEEEIRALEPV 973
|
890 900
....*....|....*....|...
gi 1622956496 993 TRVALDHLESVPEKLSLLEDFKD 1015
Cdd:TIGR02169 974 NMLAIQEYEEVLKRLDELKEKRA 996
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
382-947 |
7.06e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 7.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 382 LEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQ 461
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 462 YLSELQQSEALKE---EAEKRREDLKLKaqesIRQWKLKHKKLERaLEKQSETVDELTGKNNQILKEKDELKTQMYAALQ 538
Cdd:PRK03918 247 LESLEGSKRKLEEkirELEERIEELKKE----IEELEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 539 QIENLRKELNDVLTKRALQEE-------------ELHSKEEKLRDIKSHQADLE-LEVKNSLDTIHRLESELKKQSKIQS 604
Cdd:PRK03918 322 EINGIEERIKELEEKEERLEElkkklkelekrleELEERHELYEEAKAKKEELErLKKRLTGLTPEKLEKELEELEKAKE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 605 QMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADL-----ANKLAEEERAKKAVLKDLSDLTAQAKSRDEE 679
Cdd:PRK03918 402 EIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELteehrKELLEEYTAELKRIEKELKEIEEKERKLRKE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 680 TATVITQLKLERDVhqRELKDLTSSLQSVKtkheqniQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLK 759
Cdd:PRK03918 482 LRELEKVLKKESEL--IKLKELAEQLKELE-------EKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 760 SqcdrLTEELTQNENENKKLKLKYQCLKDQLEERE-KHISIEEEHLRRTEEAR---LQLKDQLLCLETEQESIlgvigke 835
Cdd:PRK03918 553 E----LKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYneyLELKDAEKELEREEKEL------- 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 836 idAACKTFSKDSMEKlkvfssgpdihydphrwLAESKTKLQWLCEELKERENREKNLRHqlmlcrQQVRNVTEHKESELQ 915
Cdd:PRK03918 622 --KKLEEELDKAFEE-----------------LAETEKRLEELRKELEELEKKYSEEEY------EELREEYLELSRELA 676
|
570 580 590
....*....|....*....|....*....|..
gi 1622956496 916 CLFQQIERQEQLLDEIHREKRDLLEETQRKDE 947
Cdd:PRK03918 677 GLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
200-809 |
2.69e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 61.73 E-value: 2.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 200 TLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAiKNKLiqtE 279
Cdd:pfam01576 357 ALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQ-RAEL---A 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 280 TEKNQLEQELELSRKLLNQSEG----------SRETLLHQVEELRAQLTIAegdRKGLQHQVSQISKQQSNYQDEQGEDW 349
Cdd:pfam01576 433 EKLSKLQSELESVSSLLNEAEGkniklskdvsSLESQLQDTQELLQEETRQ---KLNLSTRLRQLEDERNSLQEQLEEEE 509
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 350 RFRRGVEREKQDLEKQMSDLRVQLNFNAMASE-LEEVKR-----------CMERKDKEKAHLASQVEILTRELEN---GE 414
Cdd:pfam01576 510 EAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEaLEEGKKrlqrelealtqQLEEKAAAYDKLEKTKNRLQQELDDllvDL 589
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 415 KQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQylSELQQSEALKEEAEKRREdlklkAQESIRQW 494
Cdd:pfam01576 590 DHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKET--RALSLARALEEALEAKEE-----LERTNKQL 662
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 495 KLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYA---ALQQIEN--LRKELNdVLTKRALQEEELHSKEEK-- 567
Cdd:pfam01576 663 RAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEEledELQATEDakLRLEVN-MQALKAQFERDLQARDEQge 741
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 568 ------LRDIKSHQADLELEVK---NSLDTIHRLESELKkqsKIQSQMKVEKAHLEEEIAELKKSQAQDKakllEMQESI 638
Cdd:pfam01576 742 ekrrqlVKQVRELEAELEDERKqraQAVAAKKKLELDLK---ELEAQIDAANKGREEAVKQLKKLQAQMK----DLQREL 814
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 639 KDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETatviTQLKLERDVHQRELKDLTSSLQSVktkheqniqe 718
Cdd:pfam01576 815 EEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERAR----RQAQQERDELADEIASGASGKSAL---------- 880
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 719 lmkhfKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELT--------------QNENENKKLKLKYQ 784
Cdd:pfam01576 881 -----QDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAaerstsqksesarqQLERQNKELKAKLQ 955
|
650 660
....*....|....*....|....*.
gi 1622956496 785 CLKDQLEEREK-HISIEEEHLRRTEE 809
Cdd:pfam01576 956 EMEGTVKSKFKsSIAALEAKIAQLEE 981
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
268-816 |
7.97e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 7.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 268 EGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEgdrkGLQHQVSQISKQQSNYQDEQGE 347
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIE----ELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 348 DWRFRRGVEREKQDLEKQMSDLR----VQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQlqmlDR 423
Cdd:PRK03918 264 LEERIEELKKEIEELEEKVKELKelkeKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKE----ER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 424 LKEIQNHFDtcEAERKHADLqiseltrhaedatkqaEQYLSELQQSEALKEEAEKRREDLKLKAQESIrqwKLKHKKLER 503
Cdd:PRK03918 340 LEELKKKLK--ELEKRLEEL----------------EERHELYEEAKAKKEELERLKKRLTGLTPEKL---EKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 504 ALEKQSETVDELTGKNNQILKEKDELKTqmyaalqQIENLRKELNDV-LTKRALQEEE----LHSKEEKLRDIKSHQADL 578
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKK-------AIEELKKAKGKCpVCGRELTEEHrkelLEEYTAELKRIEKELKEI 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 579 ELEVKNSLDTIHRLESELKKQSKIQSQMKV--EKAHLEEEIAELKKSQAQDKAKLLEmqESIKDLSAIRADLANkLAEEE 656
Cdd:PRK03918 472 EEKERKLRKELRELEKVLKKESELIKLKELaeQLKELEEKLKKYNLEELEKKAEEYE--KLKEKLIKLKGEIKS-LKKEL 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 657 RAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKH------EQNIQELMKHFKKEKSEA 730
Cdd:PRK03918 549 EKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYlelkdaEKELEREEKELKKLEEEL 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 731 ENHIRTLKaeslEEKNMAKVHRGQLDKLKSQCD-----RLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLR 805
Cdd:PRK03918 629 DKAFEELA----ETEKRLEELRKELEELEKKYSeeeyeELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELE 704
|
570
....*....|.
gi 1622956496 806 RTEEARLQLKD 816
Cdd:PRK03918 705 EREKAKKELEK 715
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
236-930 |
1.06e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 59.75 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 236 RELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQE----LELSRKLLNQSEGSRETLLHQVE 311
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMErdamADIRRRESQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 312 ELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVErEKQDLEKQMSDLRVQLNFNAMASELEEVKRCMer 391
Cdd:pfam15921 153 ELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFE-EASGKKIYEHDSMSTMHFRSLGSAISKILREL-- 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 392 kDKEKAHLASQVEILTRELENGEKQQLQMLDRLkeIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQ--QS 469
Cdd:pfam15921 230 -DTEISYLKGRIFPVEDQLEALKSESQNKIELL--LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEiiQE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 470 EALKEEAEKRREDLKLKAqeSIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYaalQQIENLRKELND 549
Cdd:pfam15921 307 QARNQNSMYMRQLSDLES--TVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFS---QESGNLDDQLQK 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 550 VLTkralqeeELHSKEEKLRDIKSHQADL-ELEVKNSLdTIHRLESELKKQSkiqsqMKVEK--AHLEEEIAELKKSQAQ 626
Cdd:pfam15921 382 LLA-------DLHKREKELSLEKEQNKRLwDRDTGNSI-TIDHLRRELDDRN-----MEVQRleALLKAMKSECQGQMER 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 627 DKAKLLEMQESIKDLSAIRADLanklaeeERAKKAVLKDLSDLTAQaKSRDEETATVITQLKLERDVHQRELKDLTSSLQ 706
Cdd:pfam15921 449 QMAAIQGKNESLEKVSSLTAQL-------ESTKEMLRKVVEELTAK-KMTLESSERTVSDLTASLQEKERAIEATNAEIT 520
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 707 SVKTKHEQNIQELmKHFKKEkseaENHIRTLKAESleekNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCL 786
Cdd:pfam15921 521 KLRSRVDLKLQEL-QHLKNE----GDHLRNVQTEC----EALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVE 591
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 787 KDQLEerekhisieeehlRRTEEARLQLKDQLLCLETEQESIlgvigKEIDAackTFSKDSMEKLKVFSSGPDihydPHR 866
Cdd:pfam15921 592 KAQLE-------------KEINDRRLELQEFKILKDKKDAKI-----RELEA---RVSDLELEKVKLVNAGSE----RLR 646
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622956496 867 WLAESKTKLQWLCEELKERENREKNLRHQLMLCRQQVRNVTEHKESELQCLFQQIERQEQLLDE 930
Cdd:pfam15921 647 AVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQ 710
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
195-832 |
1.16e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.70 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 195 AETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKAD---EHEGAI 271
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEqlaADLSKY 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 272 KNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQdeqgedwrf 351
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYA--------- 538
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 352 rRGVErekqdlekqmSDLRVQLNFNAMASElEEVKRCMERKDKEKAHLASQVEIltreleNGEKQQLQMLDRLKE---IQ 428
Cdd:TIGR02169 539 -TAIE----------VAAGNRLNNVVVEDD-AVAKEAIELLKRRKAGRATFLPL------NKMRDERRDLSILSEdgvIG 600
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 429 NHFDTCEAERKHAD-----LQISELTRHAEDATKQAEQY--------LSELQQSEALKEEAEKRREDLKLKAQESIRQWK 495
Cdd:TIGR02169 601 FAVDLVEFDPKYEPafkyvFGDTLVVEDIEAARRLMGKYrmvtlegeLFEKSGAMTGGSRAPRGGILFSRSEPAELQRLR 680
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 496 LKHKKLERALEKqsetvdeLTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKshq 575
Cdd:TIGR02169 681 ERLEGLKRELSS-------LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE--- 750
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 576 adlelevknslDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKllEMQESIKDLSAIRADLANKLAEE 655
Cdd:TIGR02169 751 -----------QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP--EIQAELSKLEEEVSRIEARLREI 817
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 656 ERAkkavLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTS---SLQSVKTKHEQNIQEL---MKHFKKEKSE 729
Cdd:TIGR02169 818 EQK----LNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGkkeELEEELEELEAALRDLesrLGDLKKERDE 893
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 730 AENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLK------LKYQCLKDQLEEREKHISIEE-- 801
Cdd:TIGR02169 894 LEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEeipeeeLSLEDVQAELQRVEEEIRALEpv 973
|
650 660 670
....*....|....*....|....*....|....*.
gi 1622956496 802 -----EHLRRTEEARLQLKDQLLCLETEQESILGVI 832
Cdd:TIGR02169 974 nmlaiQEYEEVLKRLDELKEKRAKLEEERKAILERI 1009
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
400-630 |
1.83e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 1.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 400 ASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKR 479
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 480 REDLKLKAQESIRQWKLKHKKLERALEKQSETVdeltgknNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEE 559
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDF-------LDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622956496 560 ELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAK 630
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
154-412 |
3.35e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.14 E-value: 3.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 154 QETDDMTQLHAFHQSLRDLSSEQIRLGDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMR 233
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK 799
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 234 TERELVERRQDQLGlmslQLQEALKKQEAKADEHEgaikNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEEL 313
Cdd:TIGR02168 800 ALREALDELRAELT----LLNEEAANLRERLESLE----RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEEL 871
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 314 RAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQL--------NFNAMASE---- 381
Cdd:TIGR02168 872 ESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLeglevridNLQERLSEeysl 951
|
250 260 270
....*....|....*....|....*....|..
gi 1622956496 382 -LEEVKRCMERKDKEKAHLASQVEILTRELEN 412
Cdd:TIGR02168 952 tLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
178-624 |
3.77e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.47 E-value: 3.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 178 RLGDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEAL 257
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 258 KKQEAKADEHEgaIKNKLIQTETEKNQLEQELELSRKLLNQSEgSRETLLHQVEELRAQLTIAEgdRKGLQHQVSQISKQ 337
Cdd:COG4717 130 LYQELEALEAE--LAELPERLEELEERLEELRELEEELEELEA-ELAELQEELEELLEQLSLAT--EEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 338 QSNYQDEQGEdwrfRRGVEREKQDLEKQMSDLRVQLNFNAMASELEEVKR-----------------CMERKDKEKAHLA 400
Cdd:COG4717 205 QQRLAELEEE----LEEAQEELEELEEELEQLENELEAAALEERLKEARLllliaaallallglggsLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 401 SQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRR 480
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 481 EDLKLKAQESIRQWKLKHKKLE-----RALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQI--ENLRKELNDVLTK 553
Cdd:COG4717 361 EELQLEELEQEIAALLAEAGVEdeeelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeEELEEELEELEEE 440
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 554 RALQEEELHSKEEKLRDIKSHQADLELEVKNS--LDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQ 624
Cdd:COG4717 441 LEELEEELEELREELAELEAELEQLEEDGELAelLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
535-749 |
4.50e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 4.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 535 AALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLE 614
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 615 EEIAELK-----------KSQAQDKAKLLEMQESIKDLsAIRADLANKLAEEERAK----KAVLKDLSDLTAQAKSRDEE 679
Cdd:COG4942 97 AELEAQKeelaellralyRLGRQPPLALLLSPEDFLDA-VRRLQYLKYLAPARREQaeelRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 680 TATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQELmKHFKKEKSEAENHIRTLKAESLEEKNMAK 749
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAEL-AELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
303-578 |
4.55e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.62 E-value: 4.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 303 RETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFR--RGVEREKQDLEKQMSDLRvqlnfnAMAS 380
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERLD------ASSD 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 381 ELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAE 460
Cdd:COG4913 686 DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER 765
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 461 QYLSELQQS-EALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTG----------------KNNQIL 523
Cdd:COG4913 766 ELRENLEERiDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRleedglpeyeerfkelLNENSI 845
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622956496 524 KEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEE---LHSKEEKLRDIKSHQADL 578
Cdd:COG4913 846 EFVADLLSKLRRAIREIKERIDPLNDSLKRIPFGPGRylrLEARPRPDPEVREFRQEL 903
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
199-707 |
6.05e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 57.11 E-value: 6.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 199 RTLEELTEKLNEAQKQEVVSDRVERRLQELER--------------EMRTEREL---VERRQDQLGLMSLQLQEALKKQE 261
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKkhqqlceeknalqeQLQAETELcaeAEEMRARLAARKQELEEILHELE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 262 AKADEHEgaikNKLIQTETEKNQLEQELELSRKLLNQSEGSRE-------TLLHQVEELRAQLTIAEGDRKGLQHQVSQI 334
Cdd:pfam01576 82 SRLEEEE----ERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQklqlekvTTEAKIKKLEEDILLLEDQNSKLSKERKLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 335 SKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNAMA-SELEEVKRCMERKDKEK----AHLASQVEILTRE 409
Cdd:pfam01576 158 EERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGrQELEKAKRKLEGESTDLqeqiAELQAQIAELRAQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 410 LENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTrhaEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQE 489
Cdd:pfam01576 238 LAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQ---EDLESERAARNKAEKQRRDLGEELEALKTELEDTLDT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 490 SIRQWKLKHKK------LERALE---------------KQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELN 548
Cdd:pfam01576 315 TAAQQELRSKReqevteLKKALEeetrsheaqlqemrqKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELR 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 549 DVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELkKSQAQDK 628
Cdd:pfam01576 395 TLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSL-ESQLQDT 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 629 AKLLE--------MQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQ---AKSRDEETATVITQLKLERDVHQRE 697
Cdd:pfam01576 474 QELLQeetrqklnLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQlsdMKKKLEEDAGTLEALEEGKKRLQRE 553
|
570
....*....|
gi 1622956496 698 LKDLTSSLQS 707
Cdd:pfam01576 554 LEALTQQLEE 563
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
202-773 |
1.62e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 55.50 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 202 EELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGaIKNKLIQTETE 281
Cdd:pfam05483 233 KEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELED-IKMSLQRSMST 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 282 KNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRrgvereKQD 361
Cdd:pfam05483 312 QKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKII------TME 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 362 LEKQMSDLRVQLNF-NAMASELEEVKRCMERKDKeKAHLASQVEILTRELENGEKQQLQMLDrlkeiqnhfdTCEAERKH 440
Cdd:pfam05483 386 LQKKSSELEEMTKFkNNKEVELEELKKILAEDEK-LLDEKKQFEKIAEELKGKEQELIFLLQ----------AREKEIHD 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 441 ADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQwklkHKKLERALEKQSETVDELTGKNN 520
Cdd:pfam05483 455 LEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQE----ASDMTLELKKHQEDIINCKKQEE 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 521 QILKEKDELKTQMYAALQQIENLRKELndvLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQS 600
Cdd:pfam05483 531 RMLKQIENLEEKEMNLRDELESVREEF---IQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKN 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 601 KIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKsrdeet 680
Cdd:pfam05483 608 KNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAK------ 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 681 ATVITQLKLERDVHQR---ELKDLTSSLQSVKTKHEQNIQE------LMKHFKKEKSEA----ENHIRTLKAESLEEKNM 747
Cdd:pfam05483 682 AIADEAVKLQKEIDKRcqhKIAEMVALMEKHKHQYDKIIEErdselgLYKNKEQEQSSAkaalEIELSNIKAELLSLKKQ 761
|
570 580
....*....|....*....|....*.
gi 1622956496 748 AKVHRGQLDKLKSQCDRLTEELTQNE 773
Cdd:pfam05483 762 LEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
184-678 |
1.70e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 184 NRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSlQLQEALKKQEAK 263
Cdd:PRK03918 244 EKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELR-EIEKRLSRLEEE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 264 ADEHEGAIKnKLIQTETEKNQLEQELELSRKLLNQSEGSRETLlhqvEELRAQLTIAEGDRKGLQ-HQVSQISKQQSNYQ 342
Cdd:PRK03918 323 INGIEERIK-ELEEKEERLEELKKKLKELEKRLEELEERHELY----EEAKAKKEELERLKKRLTgLTPEKLEKELEELE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 343 DEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNfnamasELEEVKRCME--RKDKEKAHLASQVEILTRELENGEKQQLQM 420
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIE------ELKKAKGKCPvcGRELTEEHRKELLEEYTAELKRIEKELKEI 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 421 LDRLKEIQNHFDTCEAERKHAdlqiSELTRHAE--DATKQAEQYLSELQqsealKEEAEKRREDLKLKAQESIrqwklKH 498
Cdd:PRK03918 472 EEKERKLRKELRELEKVLKKE----SELIKLKElaEQLKELEEKLKKYN-----LEELEKKAEEYEKLKEKLI-----KL 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 499 KKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKShqadl 578
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEK----- 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 579 elEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKllEMQESIKDLSAIRADLANKLAEEERA 658
Cdd:PRK03918 613 --ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYE--ELREEYLELSRELAGLRAELEELEKR 688
|
490 500
....*....|....*....|
gi 1622956496 659 KKAVLKDLSDLTAQAKSRDE 678
Cdd:PRK03918 689 REEIKKTLEKLKEELEEREK 708
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
452-682 |
3.18e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 3.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 452 AEDATKQAEQYLSELQQSealKEEAEKRREDLKLKAQESIRQwklkHKKLERALEKQSETVDELTGKNNQILKEKDELKT 531
Cdd:COG4942 18 QADAAAEAEAELEQLQQE---IAELEKELAALKKEEKALLKQ----LAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 532 QMYAALQQIENLRKELNDVLtkRALQEEELHSKEE----------------KLRDIKSHQADLELEVKNSLDTIHRLESE 595
Cdd:COG4942 91 EIAELRAELEAQKEELAELL--RALYRLGRQPPLAlllspedfldavrrlqYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 596 LKKQSKIQSQMKVEkahLEEEIAELKKSQAqdkakllEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKS 675
Cdd:COG4942 169 LEAERAELEALLAE---LEEERAALEALKA-------ERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
....*..
gi 1622956496 676 RDEETAT 682
Cdd:COG4942 239 AAERTPA 245
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
499-812 |
3.65e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.59 E-value: 3.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 499 KKLERALEKQSETVDELTGKNNQILKE-KDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQAD 577
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKLkEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 578 LELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDK--AKLLEMQESIKDLSAIRADLANKLAEE 655
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLErrKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 656 ERAKKAVLKDLSDL-TAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQElmkhFKKEKSEAENHI 734
Cdd:pfam02463 336 EIEELEKELKELEIkREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELEL----KSEEEKEAQLLL 411
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622956496 735 RTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARL 812
Cdd:pfam02463 412 ELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELL 489
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
390-812 |
6.66e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 6.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 390 ERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADL--QISELTRHAEDATKQAEQYLSELQ 467
Cdd:COG4717 77 EEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 468 QSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKEL 547
Cdd:COG4717 157 ELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 548 NDVLTKRALQEEELHSKEE----KLRDIKSHQADLELEVKNSLDTI---------------HRLESELKKQSKIQSQMKV 608
Cdd:COG4717 237 EAAALEERLKEARLLLLIAaallALLGLGGSLLSLILTIAGVLFLVlgllallflllarekASLGKEAEELQALPALEEL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 609 EKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANklAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLK 688
Cdd:COG4717 317 EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQEIAALLAEAGVEDEEELRAALEQA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 689 LERDVHQRELKDLTSSLQSvktkHEQNIQELMKHFKKEkseaenhirTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEE 768
Cdd:COG4717 395 EEYQELKEELEELEEQLEE----LLGELEELLEALDEE---------ELEEELEELEEELEELEEELEELREELAELEAE 461
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 769 LTQNENENK--KLKLKYQCLKDQLEEREKHIS-------IEEEHLRRTEEARL 812
Cdd:COG4717 462 LEQLEEDGElaELLQELEELKAELRELAEEWAalklaleLLEEAREEYREERL 514
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
195-636 |
9.53e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 9.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 195 AETKRTLEELTEKLNEAQKQ-EVVSDRVERRLQELEREmRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKN 273
Cdd:PRK02224 268 AETEREREELAEEVRDLRERlEELEEERDDLLAEAGLD-DADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAES 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 274 ----------KLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHqvsqiskqqsnyqd 343
Cdd:PRK02224 347 lredaddleeRAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED-------------- 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 344 eqgedwrFRRGVEREKQDLEKQMSDLRVQL----NFNAMASELEEVKRCME--RKDKEKAHLAS------QVEILTRELE 411
Cdd:PRK02224 413 -------FLEELREERDELREREAELEATLrtarERVEEAEALLEAGKCPEcgQPVEGSPHVETieedreRVEELEAELE 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 412 NGEKQQLQMLDRLKEIQnhfDTCEAERkhadlQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQEsi 491
Cdd:PRK02224 486 DLEEEVEEVEERLERAE---DLVEAED-----RIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEE-- 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 492 rqWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTqMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDI 571
Cdd:PRK02224 556 --KREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER-IRTLLAAIADAEDEIERLREKREALAELNDERRERLAEK 632
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622956496 572 KSHQADLELEVKNslDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQE 636
Cdd:PRK02224 633 RERKRELEAEFDE--ARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
455-675 |
1.39e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.75 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 455 ATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMy 534
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERA- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 535 AALQQIENLRKELNDVLTKRALQEeeLHSKEEKLRDIKSHQADLelevknsldtIHRLESELKKQSKIQSQMKVEKAHLE 614
Cdd:COG3883 93 RALYRSGGSVSYLDVLLGSESFSD--FLDRLSALSKIADADADL----------LEELKADKAELEAKKAELEAKLAELE 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622956496 615 EEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKS 675
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
156-412 |
2.26e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.98 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 156 TDDMTQLHAFHQSLRDLSSEQIRLGDDFNRELSRRSRSDAETKRTLEELTEKLN----EAQKQEVVSDRVERRLQELERE 231
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTllneEAANLRERLESLERRIAATERR 839
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 232 MRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAiKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVE 311
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL-LNERASLEEALALLRSELEELSEELRELESKRSELRRELE 918
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 312 ELRAQLTIAEGDRKGLQHQVSQISKQQSN-YQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQL------NFNAMAsELEE 384
Cdd:TIGR02168 919 ELREKLAQLELRLEGLEVRIDNLQERLSEeYSLTLEEAEALENKIEDDEEEARRRLKRLENKIkelgpvNLAAIE-EYEE 997
|
250 260
....*....|....*....|....*...
gi 1622956496 385 VKrcmERKDkekaHLASQVEILTRELEN 412
Cdd:TIGR02168 998 LK---ERYD----FLTAQKEDLTEAKET 1018
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
157-370 |
2.30e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.84 E-value: 2.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 157 DDMTQLHAFHQSLRDLSsEQIRLgddfnreLSRRSRSDAETKRTLEELTEklNEAQKQEVVSDRVERRLQELEREMRTER 236
Cdd:COG4913 232 EHFDDLERAHEALEDAR-EQIEL-------LEPIRELAERYAAARERLAE--LEYLRAALRLWFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 237 ELVERRQDQLGlmslQLQEALKKQEAKADEHEGAIKNkliQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQ 316
Cdd:COG4913 302 AELARLEAELE----RLEARLDALREELDELEAQIRG---NGGDRLEQLEREIERLERELEERERRRARLEALLAALGLP 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622956496 317 LTIAEGD----RKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLR 370
Cdd:COG4913 375 LPASAEEfaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
481-681 |
2.59e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.98 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 481 EDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDvltkralQEEE 560
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEE-------RREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 561 LhskEEKLRDIKSHQADLE-----LEVKNSLDTIHRLE----------SELKKQSKIQSQMKVEKAHLEEEIAELKKSQA 625
Cdd:COG3883 88 L---GERARALYRSGGSVSyldvlLGSESFSDFLDRLSalskiadadaDLLEELKADKAELEAKKAELEAKLAELEALKA 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622956496 626 QDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETA 681
Cdd:COG3883 165 ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAA 220
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
190-835 |
4.20e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 4.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 190 RSRSDAETKRTLEELTEKLNEAQKQEvvsdrverrlQELEREMRTERELVERRQdqlglmslQLQEALKKQEAKADEHEG 269
Cdd:TIGR00618 213 MPDTYHERKQVLEKELKHLREALQQT----------QQSHAYLTQKREAQEEQL--------KKQQLLKQLRARIEELRA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 270 AIKN-KLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGED 348
Cdd:TIGR00618 275 QEAVlEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 349 WRFRRGVERE---KQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRElENGEKQQL------- 418
Cdd:TIGR00618 355 IHIRDAHEVAtsiREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSA-FRDLQGQLahakkqq 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 419 QMLDRLKEIQNHFDTCEA-ERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLK-----LKAQES-- 490
Cdd:TIGR00618 434 ELQQRYAELCAAAITCTAqCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQeepcpLCGSCIhp 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 491 ----------------IRQWKLKHKKLERALEKQSETVDELTgKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTK- 553
Cdd:TIGR00618 514 nparqdidnpgpltrrMQRGEQTYAQLETSEEDVYHQLTSER-KQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNi 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 554 --RALQEEELHSKEEKLRDIKSHQADLELEVKnsldtIHRLESELKKQSKIQSQMKvEKAHLEEEIAELKKSQAQDKAKL 631
Cdd:TIGR00618 593 tvRLQDLTEKLSEAEDMLACEQHALLRKLQPE-----QDLQDVRLHLQQCSQELAL-KLTALHALQLTLTQERVREHALS 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 632 LEMQEsiKDLSAIRadlANKLAEEERAKKAVLKDLSDLtAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTK 711
Cdd:TIGR00618 667 IRVLP--KELLASR---QLALQKMQSEKEQLTYWKEML-AQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDA 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 712 HEQNIQELMKHFK-KEKSEAENHIRTLKAESLEEKNMAKvhrgqldklksqcdrLTEELTQNENENKKLKLKYQCLKDQL 790
Cdd:TIGR00618 741 LNQSLKELMHQARtVLKARTEAHFNNNEEVTAALQTGAE---------------LSHLAAEIQFFNRLREEDTHLLKTLE 805
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 1622956496 791 EEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESILGVIGKE 835
Cdd:TIGR00618 806 AEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQ 850
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
171-678 |
4.56e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 51.06 E-value: 4.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 171 DLSSEQIRLgDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGlMS 250
Cdd:PRK01156 191 KLKSSNLEL-ENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLS-ME 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 251 LQLQEALKKQEAKADEHEG----AIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETL--LHQVEELRAQLTIAEGDR 324
Cdd:PRK01156 269 LEKNNYYKELEERHMKIINdpvyKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIkkLSVLQKDYNDYIKKKSRY 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 325 KGLQHQVSQISKQQSNYQD-----EQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHL 399
Cdd:PRK01156 349 DDLNNQILELEGYEMDYNSylksiESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSL 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 400 ASQVEILtRELENGEKQQLQML---------------DRLKEIQNHFDT----CEAERKHADLQISELTRHAEDaTKQAE 460
Cdd:PRK01156 429 NQRIRAL-RENLDELSRNMEMLngqsvcpvcgttlgeEKSNHIINHYNEkksrLEEKIREIEIEVKDIDEKIVD-LKKRK 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 461 QYLS--ELQQSEALKEEAEKRREDLKlKAQESIRQWKLKHKKLERALEK-QSETVDELTGKNNqilkekDELKTQMYAAL 537
Cdd:PRK01156 507 EYLEseEINKSINEYNKIESARADLE-DIKIKINELKDKHDKYEEIKNRyKSLKLEDLDSKRT------SWLNALAVISL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 538 QQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEI 617
Cdd:PRK01156 580 IDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQI 659
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622956496 618 AELK---KSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDE 678
Cdd:PRK01156 660 AEIDsiiPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINE 723
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
210-752 |
5.57e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.81 E-value: 5.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 210 EAQKQEVVSDRVERRLQELEREMRTERELVERRQDQlglmSLQLQEALKKQEAKADEHEgaiknkliQTETEKNQLEQEL 289
Cdd:PRK02224 193 KAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQ----REQARETRDEADEVLEEHE--------ERREELETLEAEI 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 290 ELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEdwrfrrgVEREKQDLEKQMSDL 369
Cdd:PRK02224 261 EDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREE-------LEDRDEELRDRLEEC 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 370 RVQLN-FNAMA-SELEEVKRCMERKDK---EKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQ 444
Cdd:PRK02224 334 RVAAQaHNEEAeSLREDADDLEERAEElreEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDF 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 445 ISELT-----------------RHAEDATKQAEQYLSE------------------LQQSEALKEEAEKRREDLKLKAQE 489
Cdd:PRK02224 414 LEELReerdelrereaeleatlRTARERVEEAEALLEAgkcpecgqpvegsphvetIEEDRERVEELEAELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 490 sirqwklKHKKLERA--LEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEK 567
Cdd:PRK02224 494 -------VEERLERAedLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEE 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 568 LRDIKSHQADLE---LEVKNSLDTIHRLESELkkqskiqsqmkVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAI 644
Cdd:PRK02224 567 AEEAREEVAELNsklAELKERIESLERIRTLL-----------AAIADAEDEIERLREKREALAELNDERRERLAEKRER 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 645 RADLANKLaEEERAKKAVLKdlsdlTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKT-----KHEQNIQEL 719
Cdd:PRK02224 636 KRELEAEF-DEARIEEARED-----KERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEElrerrEALENRVEA 709
|
570 580 590
....*....|....*....|....*....|...
gi 1622956496 720 MKHFKKEKSEAENHIRTLKAEsLEEKNMAKVHR 752
Cdd:PRK02224 710 LEALYDEAEELESMYGDLRAE-LRQRNVETLER 741
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
186-477 |
6.23e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.51 E-value: 6.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 186 ELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELvERRQdqlglmslqlQEALKKQEAKAD 265
Cdd:pfam17380 328 EMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMREL-ERLQ----------MERQQKNERVRQ 396
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 266 EHEGAIKNKLIQTETEKNQLEQELELSrKLLNQSEGSRETLLHQVEELRAqltiaegdRKGLQHQVSQISKQQSNYQDEQ 345
Cdd:pfam17380 397 ELEAARKVKILEEERQRKIQQQKVEME-QIRAEQEEARQREVRRLEEERA--------REMERVRLEEQERQQQVERLRQ 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 346 GEDWRFRRGVEREKQDLEKQMSDlrvQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLK 425
Cdd:pfam17380 468 QEEERKRKKLELEKEKRDRKRAE---EQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRK 544
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1622956496 426 EIQNHfdtcEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAE 477
Cdd:pfam17380 545 QQEME----ERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAEYE 592
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
177-579 |
7.08e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.45 E-value: 7.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 177 IRLGDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMslqlQEA 256
Cdd:PRK03918 299 SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKK----EEL 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 257 LKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRA--------QLTIAEGDRKGLq 328
Cdd:PRK03918 375 ERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKakgkcpvcGRELTEEHRKEL- 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 329 hqVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTR 408
Cdd:PRK03918 454 --LEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLK 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 409 ELENGEKQQLQMLD-----------RLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLS-------ELQQSE 470
Cdd:PRK03918 532 EKLIKLKGEIKSLKkelekleelkkKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEpfyneylELKDAE 611
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 471 ALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSE-----TVDELTGKNNQILKEKDELKtQMYAALQQIENLRK 545
Cdd:PRK03918 612 KELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEElekkySEEEYEELREEYLELSRELA-GLRAELEELEKRRE 690
|
410 420 430
....*....|....*....|....*....|....
gi 1622956496 546 ELNDVLTKRALQEEELHSKEEKLRDIKSHQADLE 579
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKKELEKLEKALERVE 724
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
253-471 |
7.23e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.02 E-value: 7.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 253 LQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELE--LSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQ 330
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEefRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 331 VSQISKQQSNYQDEQGEDWRFR--RGVEREKQDLEKQMSDLRVQLNFN-----AMASELEEVKRCM-ERKDKEKAHLASQ 402
Cdd:COG3206 242 LAALRAQLGSGPDALPELLQSPviQQLRAQLAELEAELAELSARYTPNhpdviALRAQIAALRAQLqQEAQRILASLEAE 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622956496 403 VEILTRELENGEKQQLQMLDRLKEIQNhfdtceaerkhADLQISELTRHAEDATKQAEQYLSELQQSEA 471
Cdd:COG3206 322 LEALQAREASLQAQLAQLEARLAELPE-----------LEAELRRLEREVEVARELYESLLQRLEEARL 379
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
405-780 |
1.07e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 50.08 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 405 ILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERK-----------HADLQISELTRHAEDATKQ-AEQYLSELQQSEAL 472
Cdd:COG5022 797 IKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKlreteevefslKAEVLIQKFGRSLKAKKRFsLLKKETIYLQSAQR 876
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 473 KEEAEKRREDLKLKAqESIRQWKLKHKKLE-RALEK----QSETVDELTGKNNQILKEKDELKTQMYAALQQIEnlrKEL 547
Cdd:COG5022 877 VELAERQLQELKIDV-KSISSLKLVNLELEsEIIELkkslSSDLIENLEFKTELIARLKKLLNNIDLEEGPSIE---YVK 952
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 548 NDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAEL------- 620
Cdd:COG5022 953 LPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVaelqsas 1032
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 621 --KKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKL-ERDVHQRE 697
Cdd:COG5022 1033 kiISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVtNRNLVKPA 1112
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 698 LKDLTSSLQSVKTKHEQNIQEL-------MKHFKKEKSEAENHIRTLKAESLEEKNMAKVHR-GQLDKLKSQCDRLTEEL 769
Cdd:COG5022 1113 NVLQFIVAQMIKLNLLQEISKFlsqlvntLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFaALSEKRLYQSALYDEKS 1192
|
410
....*....|.
gi 1622956496 770 TQNENENKKLK 780
Cdd:COG5022 1193 KLSSSEVNDLK 1203
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
173-797 |
1.10e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.97 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 173 SSEQIRLGDDFNRELSRRSRSDAETKRTLEELT---EKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLM 249
Cdd:TIGR00618 241 SHAYLTQKREAQEEQLKKQQLLKQLRARIEELRaqeAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKM 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 250 SLQLQEALKKQEAKADEHEGAIKNKLIQT-ETEKNQLEQELELSRKLLNQSEGSRETLLH------QVEELRAQLTIAEG 322
Cdd:TIGR00618 321 RSRAKLLMKRAAHVKQQSSIEEQRRLLQTlHSQEIHIRDAHEVATSIREISCQQHTLTQHihtlqqQKTTLTQKLQSLCK 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 323 DRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNAMAselEEVKRCMERKDKEKAHLASQ 402
Cdd:TIGR00618 401 ELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLE---KIHLQESAQSLKEREQQLQT 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 403 VEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISEL--------------TRHAEDATKQAEQYLSELQQ 468
Cdd:TIGR00618 478 KEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPgpltrrmqrgeqtyAQLETSEEDVYHQLTSERKQ 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 469 SEALKEEAEKRREDLKLKAQ------ESIRQWKLKHKKLERALEKQSETVDELTGKNnQILKEKDELKTQMYAALQQIEN 542
Cdd:TIGR00618 558 RASLKEQMQEIQQSFSILTQcdnrskEDIPNLQNITVRLQDLTEKLSEAEDMLACEQ-HALLRKLQPEQDLQDVRLHLQQ 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 543 LRKELNDVLTKRALQEEEL--HSKEEKLRDIKSHQADLELEVKNSLDtihRLESELKKQSKIQSQMKVEKAHLEEEIAEL 620
Cdd:TIGR00618 637 CSQELALKLTALHALQLTLtqERVREHALSIRVLPKELLASRQLALQ---KMQSEKEQLTYWKEMLAQCQTLLRELETHI 713
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 621 KKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSR---DEETATVITQLKLERDVHQRE 697
Cdd:TIGR00618 714 EEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEvtaALQTGAELSHLAAEIQFFNRL 793
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 698 LKDLTSSLQSVKTKHEQNIQElmkhfkkekseaENHIRTLKAEsleeknmakvhrgQLDKLKSQCDRLTEELTQNENENK 777
Cdd:TIGR00618 794 REEDTHLLKTLEAEIGQEIPS------------DEDILNLQCE-------------TLVQEEEQFLSRLEEKSATLGEIT 848
|
650 660
....*....|....*....|
gi 1622956496 778 KLKLKYQCLKDQLEEREKHI 797
Cdd:TIGR00618 849 HQLLKYEECSKQLAQLTQEQ 868
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
754-953 |
1.10e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 754 QLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESILGVIG 833
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 834 KEIDAACKTfSKDSMEKLKVFSSGPDIHYDPHRWLAESKTKLQWLCEELKERENREKNLRHQLMLCRQQVRNVTEHKESE 913
Cdd:COG4942 108 ELLRALYRL-GRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1622956496 914 LQCLFQQIERQEQLLDEIHREKRDLLEETQRKDEEMGSLQ 953
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
243-797 |
1.59e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.33 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 243 QDQLGLMSLQLQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEG 322
Cdd:pfam05483 62 QEGLKDSDFENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 323 DRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDL-----RVQLNFNAMASELEEVKRCMERKDKEKA 397
Cdd:pfam05483 142 ENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLnnnieKMILAFEELRVQAENARLEMHFKLKEDH 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 398 HLASQVEILTRELENGEKQQLQMLdrlkeiqnHFDTCEAERKHADLQIseLTRHAEDATKQAEQYLSelQQSEALKEEAE 477
Cdd:pfam05483 222 EKIQHLEEEYKKEINDKEKQVSLL--------LIQITEKENKMKDLTF--LLEESRDKANQLEEKTK--LQDENLKELIE 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 478 KRR------EDLKLKAQESIRQwklkHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVL 551
Cdd:pfam05483 290 KKDhltkelEDIKMSLQRSMST----QKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 552 tKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKL 631
Cdd:pfam05483 366 -RTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFL 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 632 LEMQEsiKDLSAIRADLANKLAEEERAKKAVlKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVK-- 709
Cdd:pfam05483 445 LQARE--KEIHDLEIQLTAIKTSEEHYLKEV-EDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQed 521
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 710 ----TKHEQNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVhrgQLDKLKSQCDRLTEELTQNENENKKLKLKYQC 785
Cdd:pfam05483 522 iincKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKC---KLDKSEENARSIEYEVLKKEKQMKILENKCNN 598
|
570
....*....|..
gi 1622956496 786 LKDQLEEREKHI 797
Cdd:pfam05483 599 LKKQIENKNKNI 610
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
453-630 |
2.21e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 48.24 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 453 EDATKQAEQYlSELQQSEAlKEEAEKRREDLklkaQESIRQWKLKHKKLERALEKQSETVDE----LTGKNNQILKEKDE 528
Cdd:PRK12704 45 EEAKKEAEAI-KKEALLEA-KEEIHKLRNEF----EKELRERRNELQKLEKRLLQKEENLDRklelLEKREEELEKKEKE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 529 LKTQMyaalQQIENLRKELndvltkralqeEELHSKE-EKLRDIKSHQADlelEVKNSLdtIHRLESELKKqskiqsqmk 607
Cdd:PRK12704 119 LEQKQ----QELEKKEEEL-----------EELIEEQlQELERISGLTAE---EAKEIL--LEKVEEEARH--------- 169
|
170 180
....*....|....*....|...
gi 1622956496 608 vEKAHLEEEIAELKKSQAQDKAK 630
Cdd:PRK12704 170 -EAAVLIKEIEEEAKEEADKKAK 191
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
393-613 |
2.49e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.47 E-value: 2.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 393 DKEKAHLASQVEILTRELENGEKQQLQMLDRLkeiQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYlselqqSEAL 472
Cdd:PHA02562 187 DMKIDHIQQQIKTYNKNIEEQRKKNGENIARK---QNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDP------SAAL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 473 KEEAEKRredLKLKAQesIRQWKLKHKKLE---------RALEKQSETVDELTGKNNQILKEKDELKTQmYAALQQIEN- 542
Cdd:PHA02562 258 NKLNTAA---AKIKSK--IEQFQKVIKMYEkggvcptctQQISEGPDRITKIKDKLKELQHSLEKLDTA-IDELEEIMDe 331
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622956496 543 ---LRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHL 613
Cdd:PHA02562 332 fneQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHR 405
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
452-826 |
3.16e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.23 E-value: 3.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 452 AEDATKQAEQYLSELQQSEALKEEAEKRREDLklkaQESIRQWKLKHKKLERALEKQSetVDELTGKNNQILKEKDELKT 531
Cdd:COG4717 76 LEEELKEAEEKEEEYAELQEELEELEEELEEL----EAELEELREELEKLEKLLQLLP--LYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 532 QMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQ-ADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEK 610
Cdd:COG4717 150 ELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAELEEELEEAQEELEELEEEL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 611 AHLEEEIAELKKSQAQDKAKLL----------------------EMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSD 668
Cdd:COG4717 230 EQLENELEAAALEERLKEARLLlliaaallallglggsllslilTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 669 LTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQnIQELMKHFKKEKSEAENH--IRTLKAESLEEKN 746
Cdd:COG4717 310 LPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE-AEELEEELQLEELEQEIAalLAEAGVEDEEELR 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 747 MAKVHRGQLDKLKSQCDRLTEELTQNENENKKL--KLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETE 824
Cdd:COG4717 389 AALEQAEEYQELKEELEELEEQLEELLGELEELleALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED 468
|
..
gi 1622956496 825 QE 826
Cdd:COG4717 469 GE 470
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
435-839 |
3.21e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 48.03 E-value: 3.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 435 EAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKlkaqESIRQWKLKHKKLERALEKQSETVDE 514
Cdd:COG5185 193 SELKKAEPSGTVNSIKESETGNLGSESTLLEKAKEIINIEEALKGFQDPE----SELEDLAQTSDKLEKLVEQNTDLRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 515 LTGKNNQILKEKDELKTQmyaALQQIENLRKELNDVlTKRALQEEELHSKEEKLR--DIKSHQADLELEVKNSLDtihRL 592
Cdd:COG5185 269 KLGENAESSKRLNENANN---LIKQFENTKEKIAEY-TKSIDIKKATESLEEQLAaaEAEQELEESKRETETGIQ---NL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 593 ESELKK-QSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQesikdLSAIRADLANKLAEEERAKKAVLKDLSDLTA 671
Cdd:COG5185 342 TAEIEQgQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKDT-----IESTKESLDEIPQNQRGYAQEILATLEDTLK 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 672 QAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKheqNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKvh 751
Cdd:COG5185 417 AADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMRE---ADEESQSRLEEAYDEINRSVRSKKEDLNEELTQIE-- 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 752 rgqldklksqcDRLTEELTQNENENKKLKLKYQCLKDQLEEREKhiSIEEEHLRRTEEARLQLKDQLLCLETEQESILGV 831
Cdd:COG5185 492 -----------SRVSTLKATLEKLRAKLERQLEGVRSKLDQVAE--SLKDFMRARGYAHILALENLIPASELIQASNAKT 558
|
....*...
gi 1622956496 832 IGKEIDAA 839
Cdd:COG5185 559 DGQAANLR 566
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
270-490 |
3.43e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 270 AIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEdw 349
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE-- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 350 rFRRGVEREKQDLEKQMSDL-------RVQLNFNA--------MASELEEVKRCMERKDKEKAHLASQVEILTRELENGE 414
Cdd:COG4942 95 -LRAELEAQKEELAELLRALyrlgrqpPLALLLSPedfldavrRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622956496 415 KQQLQMLDRLKEIQNHFDTCEAERKhadlqiSELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQES 490
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQ------KLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
211-838 |
3.83e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 3.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 211 AQKQEVvsDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKadEHEGAIKNKLIQTETEKNQLEQELE 290
Cdd:pfam12128 218 LNRQQV--EHWIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELRLSHLHFGYK--SDETLIASRQEERQETSAELNQLLR 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 291 LSRKLLNQSegsretllhqVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEqgedwrfrrGVEREKQDLEkQMSDLR 370
Cdd:pfam12128 294 TLDDQWKEK----------RDELNGELSAADAAVAKDRSELEALEDQHGAFLDA---------DIETAAADQE-QLPSWQ 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 371 VQL-NFNAMASELEEVKRCMERK-DKEKAHLASQVEILTRELENGEKQQLQMLDRLK-EIQNHFDTCEAERKHadlQISE 447
Cdd:pfam12128 354 SELeNLEERLKALTGKHQDVTAKyNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLaVAEDDLQALESELRE---QLEA 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 448 LTRHAEDATKQAEQYLSELQ--------------QSEALKEEAEKRREDLKlKAQESIRQWKLKHKKLERALEKQSETVD 513
Cdd:pfam12128 431 GKLEFNEEEYRLKSRLGELKlrlnqatatpelllQLENFDERIERAREEQE-AANAEVERLQSELRQARKRRDQASEALR 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 514 ELTGKNNQILKEKDELKTQMYAALQQ-IENLRKELND-------VLTKRALQEEELH--------SKEEKLRDIKSH--- 574
Cdd:pfam12128 510 QASRRLEERQSALDELELQLFPQAGTlLHFLRKEAPDweqsigkVISPELLHRTDLDpevwdgsvGGELNLYGVKLDlkr 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 575 -----QADLELEVKNSLDtihRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLA 649
Cdd:pfam12128 590 idvpeWAASEEELRERLD---KAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEK 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 650 NKLAEE-ERAKKAVLKDLSDLTAQAKSRDEEtatvITQLKLERDVHQRELK-DLTSSLQSVKTKHEQNIQELMKHFKKEK 727
Cdd:pfam12128 667 DKKNKAlAERKDSANERLNSLEAQLKQLDKK----HQAWLEEQKEQKREARtEKQAYWQVVEGALDAQLALLKAAIAARR 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 728 SEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEeehLRRT 807
Cdd:pfam12128 743 SGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQ---LSNI 819
|
650 660 670
....*....|....*....|....*....|.
gi 1622956496 808 EEARLQLKDQLLCLETEQESILGVIGKEIDA 838
Cdd:pfam12128 820 ERAISELQQQLARLIADTKLRRAKLEMERKA 850
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
709-1025 |
3.87e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 3.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 709 KTKHEQNIQELMKHFKKEKSEAENHIRTLKAESLEEknmakvhrgQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKD 788
Cdd:TIGR02169 202 RLRREREKAERYQALLKEKREYEGYELLKEKEALER---------QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQ 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 789 QLEEREKHISieeehlRRTEEARLQLKDQLLCLETEQESILGVIgkeidAACKTFSKDSMEKLKVFSSGPDIHYDPHRWL 868
Cdd:TIGR02169 273 LLEELNKKIK------DLGEEEQLRVKEKIGELEAEIASLERSI-----AEKERELEDAEERLAKLEAEIDKLLAEIEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 869 AESKTKLQWLCEELKErenREKNLRHQLMLCRQQVRNV-TEHKES--ELQCLFQQIERQEQLLDEIHREKRDLLEETQRK 945
Cdd:TIGR02169 342 EREIEEERKRRDKLTE---EYAELKEELEDLRAELEEVdKEFAETrdELKDYREKLEKLKREINELKRELDRLQEELQRL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 946 DEEMGSLQPKLlfklppwedASQTAVRNQSEAQLEEKADRVIALETSTRVALDHLESVPEKLS-LLEDFKDFRDSCSSSE 1024
Cdd:TIGR02169 419 SEELADLNAAI---------AGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYdLKEEYDRVEKELSKLQ 489
|
.
gi 1622956496 1025 R 1025
Cdd:TIGR02169 490 R 490
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
166-450 |
4.99e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 166 HQSLRDLSSEQIRLGDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRT-ERELVERRQD 244
Cdd:TIGR02169 715 SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlEARLSHSRIP 794
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 245 QLGLMSLQLQEALKKQEAKADEHEGAIKNKliqtETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDR 324
Cdd:TIGR02169 795 EIQAELSKLEEEVSRIEARLREIEQKLNRL----TLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEEL 870
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 325 KGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNAMA--------SELEEVKRCMERKDKEK 396
Cdd:TIGR02169 871 EELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKlealeeelSEIEDPKGEDEEIPEEE 950
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622956496 397 AHL---ASQVEILTRELENGE-------KQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTR 450
Cdd:TIGR02169 951 LSLedvQAELQRVEEEIRALEpvnmlaiQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
201-532 |
4.99e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 47.74 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 201 LEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERElvERRQDQLGLMSLQLQEALKKQEAKADEhegaiKNKLIQTET 280
Cdd:PRK10929 57 LEERKGSLERAKQYQQVIDNFPKLSAELRQQLNNERD--EPRSVPPNMSTDALEQEILQVSSQLLE-----KSRQAQQEQ 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 281 EK--------NQLEQELELSRKLLN------QSEGSRETLLHQveelrAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQg 346
Cdd:PRK10929 130 DRareisdslSQLPQQQTEARRQLNeierrlQTLGTPNTPLAQ-----AQLTALQAESAALKALVDELELAQLSANNRQ- 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 347 EDWRFRRGV-EREKQDLEKQMSDLRVQLNF---NAMASELEEVKRCMERKDKEKAHLASQVEIlTRELENGEKQQLQMLD 422
Cdd:PRK10929 204 ELARLRSELaKKRSQQLDAYLQALRNQLNSqrqREAERALESTELLAEQSGDLPKSIVAQFKI-NRELSQALNQQAQRMD 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 423 rlkeiqnhfdtceaerkhadlQISELTRHAEDATKQAEQYLSEL-QQS----------EALKEEAEKRREDLKLKAQES- 490
Cdd:PRK10929 283 ---------------------LIASQQRQAASQTLQVRQALNTLrEQSqwlgvsnalgEALRAQVARLPEMPKPQQLDTe 341
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1622956496 491 IRQWKLKHKKLERALEKQSETVD-------ELTGKNNQILkeKDELKTQ 532
Cdd:PRK10929 342 MAQLRVQRLRYEDLLNKQPQLRQirqadgqPLTAEQNRIL--DAQLRTQ 388
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
372-530 |
5.05e-05 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 47.51 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 372 QLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEiqnhfdtcEAERKHADLqiseltrh 451
Cdd:PRK00409 515 KEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLE--------EAEKEAQQA-------- 578
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622956496 452 AEDATKQAEQYLSELQQSEALKEEAEKRREdlklkAQESIRQWKLKHKKLERALEKQSETVDEltgknnqiLKEKDELK 530
Cdd:PRK00409 579 IKEAKKEADEIIKELRQLQKGGYASVKAHE-----LIEARKRLNKANEKKEKKKKKQKEKQEE--------LKVGDEVK 644
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
390-666 |
6.01e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 6.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 390 ERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQiSELTRhAEDATKQAEQYLSELQQS 469
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAE-REIAE-LEAELERLDASSDDLAAL 690
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 470 EALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELND 549
Cdd:COG4913 691 EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELREN 770
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 550 VLTKRALQEEELHSKEEKLRDI-KSHQADLELEVKNSLDTIHRLESELKKQSKIQSQmkvEKAHLEEEIAELKKSQAQDK 628
Cdd:COG4913 771 LEERIDALRARLNRAEEELERAmRAFNREWPAETADLDADLESLPEYLALLDRLEED---GLPEYEERFKELLNENSIEF 847
|
250 260 270
....*....|....*....|....*....|....*...
gi 1622956496 629 akllemqesikdlsaiRADLANKLAEEERAKKAVLKDL 666
Cdd:COG4913 848 ----------------VADLLSKLRRAIREIKERIDPL 869
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
211-459 |
6.04e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 6.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 211 AQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGlmslQLQEALKKQEAKadehegaiknkLIQTETEKNQLEQELE 290
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEK----ALLKQLAALERR-----------IAALARRIRALEQELA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 291 LSRKLLNQSEGSRETLLHQVEELRAQL--TIAEGDRKGLQHQVSQISKQQSNYQDEqgedwRFRRGVEREKQDLEKQMSD 368
Cdd:COG4942 80 ALEAELAELEKEIAELRAELEAQKEELaeLLRALYRLGRQPPLALLLSPEDFLDAV-----RRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 369 LRVQLNfnamasELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRL----KEIQNHFDTCEAERKHADLQ 444
Cdd:COG4942 155 LRADLA------ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLekelAELAAELAELQQEAEELEAL 228
|
250
....*....|....*
gi 1622956496 445 ISELTRHAEDATKQA 459
Cdd:COG4942 229 IARLEAEAAAAAERT 243
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
528-683 |
6.53e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.69 E-value: 6.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 528 ELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELK--KQSKIQSQ 605
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvRNNKEYEA 93
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622956496 606 MKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDL-SDLTAQAKSRDEETATV 683
Cdd:COG1579 94 LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELeAELEELEAEREELAAKI 172
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
279-949 |
6.71e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.27 E-value: 6.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 279 ETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVErE 358
Cdd:TIGR00618 193 HGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIE-E 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 359 KQDLEKQMSDLRVQLNFN----AMASELEEVKRCMERKDKEKAHLASQVEILTREL---ENGEKQQLQMLDRLKEIQNHF 431
Cdd:TIGR00618 272 LRAQEAVLEETQERINRArkaaPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLmkrAAHVKQQSSIEEQRRLLQTLH 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 432 DTCEAERKHADLQISELtrhaedatKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSET 511
Cdd:TIGR00618 352 SQEIHIRDAHEVATSIR--------EISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQ 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 512 VDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEElhSKEEKLRDIKSHQADLELEVKNSLDTIHR 591
Cdd:TIGR00618 424 GQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKERE--QQLQTKEQIHLQETRKKAVVLARLLELQE 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 592 LESELKKQSKIQSQmkveKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTA 671
Cdd:TIGR00618 502 EPCPLCGSCIHPNP----ARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQ 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 672 QAKSRDEETATVITQLKLERDVHQRELKD-----LTSSLQSVKTKHEQNIQELMKH---FKKEKSEAENHIRTLKAESLE 743
Cdd:TIGR00618 578 CDNRSKEDIPNLQNITVRLQDLTEKLSEAedmlaCEQHALLRKLQPEQDLQDVRLHlqqCSQELALKLTALHALQLTLTQ 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 744 EKNMAKVHRGQLDKLKSqcdrlteeLTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLET 823
Cdd:TIGR00618 658 ERVREHALSIRVLPKEL--------LASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSS 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 824 EQESILGvigkEIDAACKTFSKDSMEKLKVFSSGPDIHYDPHRWLA---ESKTKLQWLCEELKERENREKNLRHQLMLCR 900
Cdd:TIGR00618 730 LGSDLAA----REDALNQSLKELMHQARTVLKARTEAHFNNNEEVTaalQTGAELSHLAAEIQFFNRLREEDTHLLKTLE 805
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 901 QQVRNVTEHKE-----------SELQCLFQQIERQEQLLDEIHREKRDLLEETQRKDEEM 949
Cdd:TIGR00618 806 AEIGQEIPSDEdilnlqcetlvQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLT 865
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
228-666 |
7.29e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 7.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 228 LEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKnkliQTETEKNQLEQELELSRKLLNQSEGSRETL- 306
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREELEKLe 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 307 -LHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQM--SDLRVQLNFNAMASELE 383
Cdd:COG4717 123 kLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLeqLSLATEEELQDLAEELE 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 384 EVKRCMERKDKEKAHLASQVEILTRELENGEKQQL--QMLDRLKEIQNHFDT----CEAERKHADLQISELTRHAEDATK 457
Cdd:COG4717 203 ELQQRLAELEEELEEAQEELEELEEELEQLENELEaaALEERLKEARLLLLIaaalLALLGLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 458 QAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALeKQSETVDELTGKNNQILKEKDELKTQMYAAL 537
Cdd:COG4717 283 LGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGL-PPDLSPEELLELLDRIEELQELLREAEELEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 538 Q-QIENLRKELNDVLTKRALQEEE----LHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELkkqskiqsqmkvEKAH 612
Cdd:COG4717 362 ElQLEELEQEIAALLAEAGVEDEEelraALEQAEEYQELKEELEELEEQLEELLGELEELLEAL------------DEEE 429
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622956496 613 LEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLAN-----KLAEEERAKKAVLKDL 666
Cdd:COG4717 430 LEEELEELEEELEELEEELEELREELAELEAELEQLEEdgelaELLQELEELKAELREL 488
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
252-561 |
1.09e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 252 QLQEALKKQEAKADEHEGAIKNKLIQTETEKNQLE--QELELSRKLLnqsegSRETLLHQVEELRAQLTIAEGDRKGLQH 329
Cdd:PRK04863 841 QLNRRRVELERALADHESQEQQQRSQLEQAKEGLSalNRLLPRLNLL-----ADETLADRVEEIREQLDEAEEAKRFVQQ 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 330 Q---VSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQmsdlrvqlnfNAMASELEEVkrcmerkDKEKAHLASQ---- 402
Cdd:PRK04863 916 HgnaLAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDA----------KQQAFALTEV-------VQRRAHFSYEdaae 978
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 403 --------VEILTRELENGEKQQLQMLDRLKEIQNHFDtcEAERKHADLQiSELTRhAEDATKQAEQYLSEL--QQSEAL 472
Cdd:PRK04863 979 mlaknsdlNEKLRQRLEQAEQERTRAREQLRQAQAQLA--QYNQVLASLK-SSYDA-KRQMLQELKQELQDLgvPADSGA 1054
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 473 KEEAEKRREDLklkaQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLT 552
Cdd:PRK04863 1055 EERARARRDEL----HARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAGWCAVLRLVKDNGV 1130
|
....*....
gi 1622956496 553 KRALQEEEL 561
Cdd:PRK04863 1131 ERRLHRREL 1139
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
181-805 |
1.16e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 181 DDFNRELSRRSRSDAET-KRTLEELTEKLNEAQKQevvSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKK 259
Cdd:TIGR00606 393 KNFHTLVIERQEDEAKTaAQLCADLQSKERLKQEQ---ADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGS 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 260 QEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQltiaegdrkgLQHQVSQISKQQS 339
Cdd:TIGR00606 470 SDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQ----------LNHHTTTRTQMEM 539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 340 NYQDEQGEDWRFRRGVEREKQDLEKQMSDL----RVQLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEK 415
Cdd:TIGR00606 540 LTKDKMDKDEQIRKIKSRHSDELTSLLGYFpnkkQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEE 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 416 QQLQMLDRLkeiqnhFDTCEAERKHADLQisELTRHAEDATKQA----------EQYLSELQQSEA-------LKEEAEK 478
Cdd:TIGR00606 620 QLSSYEDKL------FDVCGSQDEESDLE--RLKEEIEKSSKQRamlagatavySQFITQLTDENQsccpvcqRVFQTEA 691
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 479 RREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQE 558
Cdd:TIGR00606 692 ELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQE 771
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 559 EELHSKEEKLRDIKSHQADLELevknsldtIHRLESELKKQSKiqsqmKVEKAHLEEEIAELKKSQAQDKAKLLEMQESI 638
Cdd:TIGR00606 772 TLLGTIMPEEESAKVCLTDVTI--------MERFQMELKDVER-----KIAQQAAKLQGSDLDRTVQQVNQEKQEKQHEL 838
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 639 KDLSAiRADLANKLAEEERAKKAVLKD-----------LSDLTAQAKSRDEETATVITQLK-LERDVHQRelKDLTSSLQ 706
Cdd:TIGR00606 839 DTVVS-KIELNRKLIQDQQEQIQHLKSktnelkseklqIGTNLQRRQQFEEQLVELSTEVQsLIREIKDA--KEQDSPLE 915
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 707 SVKTKHEQNIQELMKHFKKEKSEAENHIRTLKAESleeKNMAKVHRGQLDKLKSQCDRlteELTQNENENKKLKLkyqcl 786
Cdd:TIGR00606 916 TFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKV---KNIHGYMKDIENKIQDGKDD---YLKQKETELNTVNA----- 984
|
650
....*....|....*....
gi 1622956496 787 kdQLEEREKHISIEEEHLR 805
Cdd:TIGR00606 985 --QLEECEKHQEKINEDMR 1001
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
498-701 |
1.32e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 498 HKKLERALEKQSETVDELTGknnqiLKEKDELKTQMYAALQQIENLRKELNDVL--TKRALQEEELHSKEEKLRDIKSHQ 575
Cdd:COG4913 237 LERAHEALEDAREQIELLEP-----IRELAERYAAARERLAELEYLRAALRLWFaqRRLELLEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 576 ADLELEvknsLDTIHRLESELKKQskIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEE 655
Cdd:COG4913 312 ERLEAR----LDALREELDELEAQ--IRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1622956496 656 ERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDL 701
Cdd:COG4913 386 RAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
464-826 |
1.40e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.19 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 464 SELQQSEALKEEAEKRREDLKLKAQEsirqwklkHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENL 543
Cdd:PRK02224 220 EEIERYEEQREQARETRDEADEVLEE--------HEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEEL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 544 RKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKS 623
Cdd:PRK02224 292 EEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 624 QAQDKAKLLEMQESIKDLsairadlanklaEEErakkavLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTS 703
Cdd:PRK02224 372 LEEAREAVEDRREEIEEL------------EEE------IEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEA 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 704 SLQSVKTKHEQNiQELMKHFK----KEKSEAENHirtlkAESLEEKNMAKV-HRGQLDKLKSQCDRLTEELTQNEnENKK 778
Cdd:PRK02224 434 TLRTARERVEEA-EALLEAGKcpecGQPVEGSPH-----VETIEEDRERVEeLEAELEDLEEEVEEVEERLERAE-DLVE 506
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1622956496 779 LKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQE 826
Cdd:PRK02224 507 AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAE 554
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
189-953 |
1.43e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 189 RRSRSDAETKRTLEELTEKLNEaQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEhE 268
Cdd:TIGR00606 312 RTVREKERELVDCQRELEKLNK-ERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFS-E 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 269 GAIKNKLiqtETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTiaeGDRKGLQHQVSQISKQQSNYQDEQGED 348
Cdd:TIGR00606 390 RQIKNFH---TLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKK---GLGRTIELKKEILEKKQEELKFVIKEL 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 349 WRFRRGVER---EKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERK---DKEKAHLASQVEILTRELENgeKQQLQMLD 422
Cdd:TIGR00606 464 QQLEGSSDRileLDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKadlDRKLRKLDQEMEQLNHHTTT--RTQMEMLT 541
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 423 RLKeiqnhFDTCEAERKHADLQISELTRHAED--ATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKK 500
Cdd:TIGR00606 542 KDK-----MDKDEQIRKIKSRHSDELTSLLGYfpNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELES 616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 501 LERALEKQSETVDELTGKNN-----QILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLR-DIKSH 574
Cdd:TIGR00606 617 KEEQLSSYEDKLFDVCGSQDeesdlERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEaELQEF 696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 575 QADLELEVKNSLDTIHRLESELKKQSKIQSQM----KVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLAN 650
Cdd:TIGR00606 697 ISDLQSKLRLAPDKLKSTESELKKKEKRRDEMlglaPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGT 776
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 651 KLAEEERAKKAvlkdLSDLTaqaksrdeetatVITQLKLERDVHQRELKDLTSSLQSVktkheqNIQELMKHFKKEKSEA 730
Cdd:TIGR00606 777 IMPEEESAKVC----LTDVT------------IMERFQMELKDVERKIAQQAAKLQGS------DLDRTVQQVNQEKQEK 834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 731 ENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRL-TEELTQNENENKKlklkyQCLKDQLEEREKHIsieEEHLRRTEE 809
Cdd:TIGR00606 835 QHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELkSEKLQIGTNLQRR-----QQFEEQLVELSTEV---QSLIREIKD 906
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 810 ARLQLKDQLLCLETEQESILGVIGKEIDAACKTFSKDSMEKLKVfssgpdihYDPHRWLAESKTKLQWLCEE-LKERENR 888
Cdd:TIGR00606 907 AKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKV--------KNIHGYMKDIENKIQDGKDDyLKQKETE 978
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 889 EKNLRHQLMLCRQQVRNVTEHKESELQCLFQQIERQEQLLDEIHREKR-----DLLEETQRKDEEMGSLQ 953
Cdd:TIGR00606 979 LNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRenelkEVEEELKQHLKEMGQMQ 1048
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
222-828 |
1.47e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.87 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 222 ERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGA------IKNKLIQTETEKNQLEQELELSRKL 295
Cdd:pfam05483 105 ENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATrhlcnlLKETCARSAEKTKKYEYEREETRQV 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 296 LNQSEGSRETLLHQVEELRAQLTIA--------EGDRKGLQHQVSQISKQ-------------QSNYQDEQGEDWRFRRG 354
Cdd:pfam05483 185 YMDLNNNIEKMILAFEELRVQAENArlemhfklKEDHEKIQHLEEEYKKEindkekqvsllliQITEKENKMKDLTFLLE 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 355 VEREKQDLEKQMSDLRVQ------LNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQ 428
Cdd:pfam05483 265 ESRDKANQLEEKTKLQDEnlkeliEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAK 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 429 NHFDTCEAERKHADLQISELTRHAEDATKQAEQYL-----------SELQQSEALKEEAEKRREDLKLKAQESiRQWKLK 497
Cdd:pfam05483 345 AAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLkiitmelqkksSELEEMTKFKNNKEVELEELKKILAED-EKLLDE 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 498 HKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDV---LTKRALQEEELHSKEEKL----RD 570
Cdd:pfam05483 424 KKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLkteLEKEKLKNIELTAHCDKLllenKE 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 571 IKSHQADLELEVKNSLDTI----HRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRA 646
Cdd:pfam05483 504 LTQEASDMTLELKKHQEDIinckKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVL 583
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 647 DLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLER---DVHQRELKDLTSSLQSVKTKHEQNIQELMKHF 723
Cdd:pfam05483 584 KKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENkqlNAYEIKVNKLELELASAKQKFEEIIDNYQKEI 663
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 724 KKEKSEAENhirtlkaeSLEEKNMAKVHRGQLDKLKSQCD-RLTEELTQNENENKKLKLKYQCLkdqLEEREKHISIEEE 802
Cdd:pfam05483 664 EDKKISEEK--------LLEEVEKAKAIADEAVKLQKEIDkRCQHKIAEMVALMEKHKHQYDKI---IEERDSELGLYKN 732
|
650 660
....*....|....*....|....*.
gi 1622956496 803 HLRRTEEARLQLKDQLLCLETEQESI 828
Cdd:pfam05483 733 KEQEQSSAKAALEIELSNIKAELLSL 758
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
154-645 |
1.66e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 154 QETDDMTQLHAFHQSLRDLSSEQIRLGDDFNRELSRRSR---------SDAETKRTLEELTEKLNEAQKQEVVSDRVERR 224
Cdd:TIGR00618 342 EQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHihtlqqqktTLTQKLQSLCKELDILQREQATIDTRTSAFRD 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 225 LQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQE-----LELSRKLLNQS 299
Cdd:TIGR00618 422 LQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQEtrkkaVVLARLLELQE 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 300 E---------------------GSRETLLHQVEELRAQLTIAEGDRKG-LQHQVSQISKQQSNYQDEQGEDWRFRRGVER 357
Cdd:TIGR00618 502 EpcplcgscihpnparqdidnpGPLTRRMQRGEQTYAQLETSEEDVYHqLTSERKQRASLKEQMQEIQQSFSILTQCDNR 581
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 358 EKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKahLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAE 437
Cdd:TIGR00618 582 SKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRK--LQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQER 659
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 438 RKHADLQISELTRHAEDATKQAEQYL-SELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELT 516
Cdd:TIGR00618 660 VREHALSIRVLPKELLASRQLALQKMqSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAARED 739
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 517 GKNNQILKEKDELKTQMYA--------------ALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEV 582
Cdd:TIGR00618 740 ALNQSLKELMHQARTVLKArteahfnnneevtaALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDIL 819
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 583 KNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIR 645
Cdd:TIGR00618 820 NLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLNGIN 882
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
288-795 |
1.86e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.66 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 288 ELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNyqdeqgedwrfrrgVEREKQDLEKQMS 367
Cdd:PRK01156 198 ELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDM--------------KNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 368 DLRVQLNFNAMASELEEVkrcMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDtcEAERKHADLQ--- 444
Cdd:PRK01156 264 DLSMELEKNNYYKELEER---HMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYH--AIIKKLSVLQkdy 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 445 --ISELTRHAEDATKQaeqyLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQI 522
Cdd:PRK01156 339 ndYIKKKSRYDDLNNQ----ILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEI 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 523 LKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEE-------LHSKEEKLRDIKSHQAD----LELEVKNSLDTIHR 591
Cdd:PRK01156 415 NVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgTTLGEEKSNHIINHYNEkksrLEEKIREIEIEVKD 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 592 LESELKKQSKIQSQMKVEKAH-----------LEEEIAELKKSQAQDKAKLLEMQE--------SIKDLSAIRADLANKL 652
Cdd:PRK01156 495 IDEKIVDLKKRKEYLESEEINksineynkiesARADLEDIKIKINELKDKHDKYEEiknrykslKLEDLDSKRTSWLNAL 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 653 A-----------EEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQnIQELMK 721
Cdd:PRK01156 575 AvislidietnrSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEK-LRGKID 653
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622956496 722 HFKKE---KSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREK 795
Cdd:PRK01156 654 NYKKQiaeIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
488-948 |
1.91e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.78 E-value: 1.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 488 QESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEK 567
Cdd:TIGR04523 46 KNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 568 LRDIKSHQADLELEVKNSLDTIHRLESELKKQSKI--------------QSQMKVEKAHLEEEIAELKKSQAQDKAKLLE 633
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKyndlkkqkeeleneLNLLEKEKLNIQKNIDKIKNKLLKLELLLSN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 634 MQESIKD---LSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLK----------LERDVHQRELKD 700
Cdd:TIGR04523 206 LKKKIQKnksLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNkikkqlsekqKELEQNNKKIKE 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 701 LTSSLQSVKTKHE----QNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLT-------EEL 769
Cdd:TIGR04523 286 LEKQLNQLKSEISdlnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSEsensekqREL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 770 TQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESILgvigKEID--AACKTFSKDS 847
Cdd:TIGR04523 366 EEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLE----KEIErlKETIIKNNSE 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 848 MEKLKVFSSGPDIHYDPHRWLAES---------------KTKLQWLCEELKERENREKNLRHQLMLCRQQVRNVTEHKES 912
Cdd:TIGR04523 442 IKDLTNQDSVKELIIKNLDNTRESletqlkvlsrsinkiKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISS 521
|
490 500 510
....*....|....*....|....*....|....*.
gi 1622956496 913 elqcLFQQIERQEQLLDEIHREKRDLLEETQRKDEE 948
Cdd:TIGR04523 522 ----LKEKIEKLESEKKEKESKISDLEDELNKDDFE 553
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
444-630 |
1.92e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 45.18 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 444 QISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQwKLKHKKLERALEKQSEtvdeltgknNQIL 523
Cdd:PRK09510 70 QQKSAKRAEEQRKKKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKKQ-AEEAAKQAALKQKQAE---------EAAA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 524 KEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEE---KLRDIKSHQADLELEVKNSLDTIHRLESELKKQS 600
Cdd:PRK09510 140 KAAAAAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEakkKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKA 219
|
170 180 190
....*....|....*....|....*....|
gi 1622956496 601 KIQSQMKVEKAHLEEEIAELKKSQAQDKAK 630
Cdd:PRK09510 220 AAEAKAAAAKAAAEAKAAAEKAAAAKAAEK 249
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
384-956 |
2.00e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.73 E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 384 EVKRCMERKDKEKAHL---------ASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISE-LTRHAE 453
Cdd:TIGR00618 153 EFAQFLKAKSKEKKELlmnlfpldqYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEkELKHLR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 454 DATKQAEQYLSELQQSEALKEEAEKRREDLKL------KAQESIRQWKLKHKKLERALEK-----QSETVDELTGKNNQI 522
Cdd:TIGR00618 233 EALQQTQQSHAYLTQKREAQEEQLKKQQLLKQlrarieELRAQEAVLEETQERINRARKAaplaaHIKAVTQIEQQAQRI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 523 LKEKDELKTQMYAALQQIENLRKELNDVLTKRALqEEELHSKEEKLRDikshQADLELEVKNSLDTIHRLESELKKQSKI 602
Cdd:TIGR00618 313 HTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRL-LQTLHSQEIHIRD----AHEVATSIREISCQQHTLTQHIHTLQQQ 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 603 QSQMKvekahleeeiaELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAksrdEETAT 682
Cdd:TIGR00618 388 KTTLT-----------QKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAI----TCTAQ 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 683 VITQLKLERDVHQRELKDLTSSLQSVKTKHEQ--NIQELMKHFKKEKSEAENHIRtlkaESLEEKNMAKVHRGQLDKLKS 760
Cdd:TIGR00618 453 CEKLEKIHLQESAQSLKEREQQLQTKEQIHLQetRKKAVVLARLLELQEEPCPLC----GSCIHPNPARQDIDNPGPLTR 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 761 QCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESILGVIGKEIDAAC 840
Cdd:TIGR00618 529 RMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAED 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 841 KTFSKDSMEKLKVFSSGPDIHYDPH-----RWLAESKTKLQWLCEELKERENREKNL-----------RHQLMLCRQQ-- 902
Cdd:TIGR00618 609 MLACEQHALLRKLQPEQDLQDVRLHlqqcsQELALKLTALHALQLTLTQERVREHALsirvlpkellaSRQLALQKMQse 688
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 903 ------VRNVTEHKESELQCLFQQIERQEQLLDEIHREKRDLLEETQRKDEEMGSLQPKL 956
Cdd:TIGR00618 689 keqltyWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKEL 748
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
249-795 |
2.26e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 249 MSLQLQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSReTLLHQVEELRAQLTIAEGDRKGLQ 328
Cdd:TIGR00606 207 MELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNL-SKIMKLDNEIKALKSRKKQMEKDN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 329 HQVSQISKQQSNYQDEQGEDWRFRRGveREKQDLEKQMSDLRVQLNFNAMASELEEVKRCMERKDKEKAHLASQV---EI 405
Cdd:TIGR00606 286 SELELKMEKVFQGTDEQLNDLYHNHQ--RTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRhqeHI 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 406 LTRELENGEKQQLQMLDRLKeiqnHFDTCEAERKHAdlqISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKL 485
Cdd:TIGR00606 364 RARDSLIQSLATRLELDGFE----RGPFSERQIKNF---HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 486 KAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELK------------TQMYAALQQIENLRKELNDVLTK 553
Cdd:TIGR00606 437 GLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRkaerelskaeknSLTETLKKEVKSLQNEKADLDRK 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 554 RALQEEELH--------------------SKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHL 613
Cdd:TIGR00606 517 LRKLDQEMEqlnhhtttrtqmemltkdkmDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKL 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 614 EEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEE---ERAKKAVLKDLSDLtAQAKSRDEETATVITQLKLE 690
Cdd:TIGR00606 597 NKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEEsdlERLKEEIEKSSKQR-AMLAGATAVYSQFITQLTDE 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 691 RD----VHQRELKDltsslqsvktkhEQNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLT 766
Cdd:TIGR00606 676 NQsccpVCQRVFQT------------EAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKE 743
|
570 580
....*....|....*....|....*....
gi 1622956496 767 EELTQNENENKKLKLKYQCLKDQLEEREK 795
Cdd:TIGR00606 744 KEIPELRNKLQKVNRDIQRLKNDIEEQET 772
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
192-521 |
2.55e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.11 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 192 RSDAETKRTLEELTEKLNEAQKQEVVSDRVER-RLQELERE-MRTERELVERRQDQlglmSLQLQEALKKQEAKADeheg 269
Cdd:pfam17380 259 RYNGQTMTENEFLNQLLHIVQHQKAVSERQQQeKFEKMEQErLRQEKEEKAREVER----RRKLEEAEKARQAEMD---- 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 270 aiKNKLIQTETEKNQLEQELELSRklLNQSEGSRETLLHQVEELRAQLT-IAEGDRKGLQHQ-----VSQISKQQSNYQD 343
Cdd:pfam17380 331 --RQAAIYAEQERMAMERERELER--IRQEERKRELERIRQEEIAMEISrMRELERLQMERQqknerVRQELEAARKVKI 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 344 EQGEDWRFRRGVEREKQDLEKQMSDLRVQlnfnAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMlDR 423
Cdd:pfam17380 407 LEEERQRKIQQQKVEMEQIRAEQEEARQR----EVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLEL-EK 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 424 LKEIQNHFD-----TCEAERKHADLQISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKL----KAQESIRQW 494
Cdd:pfam17380 482 EKRDRKRAEeqrrkILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMeerrRIQEQMRKA 561
|
330 340
....*....|....*....|....*..
gi 1622956496 495 KLKHKKLErALEKQSETVDELTGKNNQ 521
Cdd:pfam17380 562 TEERSRLE-AMEREREMMRQIVESEKA 587
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
414-669 |
2.61e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 45.07 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 414 EKQQLQMLDR-------LKEIQNHFdtceAERKHADLQISELTRHAEDATKQAEQY---LSELQQSeALKE------EAE 477
Cdd:COG0497 140 PDAQRELLDAfagleelLEEYREAY----RAWRALKKELEELRADEAERARELDLLrfqLEELEAA-ALQPgeeeelEEE 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 478 KRR----EDLKLKAQESIRQwkLKH---------KKLERALEKQSETVDELtgknnqilkekDELKTQMYAALQQIENLR 544
Cdd:COG0497 215 RRRlsnaEKLREALQEALEA--LSGgeggaldllGQALRALERLAEYDPSL-----------AELAERLESALIELEEAA 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 545 KELNDVLTKRALQEEELHSKEEKLRDIKS----HQADLElEVknsLDTIHRLESELKKQSkiqsqmkvekaHLEEEIAEL 620
Cdd:COG0497 282 SELRRYLDSLEFDPERLEEVEERLALLRRlarkYGVTVE-EL---LAYAEELRAELAELE-----------NSDERLEEL 346
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1622956496 621 KKSQAQDKAKLLEMQEsikDLSAIRADLANKLAeeerakKAVLKDLSDL 669
Cdd:COG0497 347 EAELAEAEAELLEAAE---KLSAARKKAAKKLE------KAVTAELADL 386
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
392-554 |
2.78e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.57 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 392 KDKEKAHLASQVEILTR--ELENGEKQQLQmlDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQS 469
Cdd:PRK09039 51 KDSALDRLNSQIAELADllSLERQGNQDLQ--DSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 470 EALKEEAEKRREDLklkaQESIRQWKLKHKKLERALEkQSETVDEltGKNNQIlkekDELKTQMYAAL----QQIENLRK 545
Cdd:PRK09039 129 KQVSARALAQVELL----NQQIAALRRQLAALEAALD-ASEKRDR--ESQAKI----ADLGRRLNVALaqrvQELNRYRS 197
|
170
....*....|...
gi 1622956496 546 E----LNDVLTKR 554
Cdd:PRK09039 198 EffgrLREILGDR 210
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
163-676 |
2.79e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 163 HAFHQSLRDLSSEQIrlgDDFNRELSRRSRSDAETKRTLEELTEKLNEAQKQevVSDRVERRLQELEREMRTERELVERR 242
Cdd:COG4913 283 LWFAQRRLELLEAEL---EELRAELARLEAELERLEARLDALREELDELEAQ--IRGNGGDRLEQLEREIERLERELEER 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 243 QDQLGlmslQLQEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLtiaeg 322
Cdd:COG4913 358 ERRRA----RLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEI----- 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 323 drKGLQHQVSQISKQQSNYQD-----------------------EQGEDWR-----------------------FRRGVE 356
Cdd:COG4913 429 --ASLERRKSNIPARLLALRDalaealgldeaelpfvgelievrPEEERWRgaiervlggfaltllvppehyaaALRWVN 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 357 REKqdlekqmsdLRVQLNFnamaselEEVKRCMERKDKEKAHLASqveiLTRELENGEKQQLQMLDRlkEIQNHFD--TC 434
Cdd:COG4913 507 RLH---------LRGRLVY-------ERVRTGLPDPERPRLDPDS----LAGKLDFKPHPFRAWLEA--ELGRRFDyvCV 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 435 EAE---RKH-----ADLQISELTRHAE--DATKQAEQYLselqqseaLKEEAEKRREDLKLKAQEsirqwklkhkkLERA 504
Cdd:COG4913 565 DSPeelRRHpraitRAGQVKGNGTRHEkdDRRRIRSRYV--------LGFDNRAKLAALEAELAE-----------LEEE 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 505 LEKQSETVDELTGKNNQILKEKDelktqmyaALQQIENLRKELNDVLTkralQEEELHSKEEKLRDIKSHQADL-ELEvk 583
Cdd:COG4913 626 LAEAEERLEALEAELDALQERRE--------ALQRLAEYSWDEIDVAS----AEREIAELEAELERLDASSDDLaALE-- 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 584 nslDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVL 663
Cdd:COG4913 692 ---EQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELR 768
|
570
....*....|...
gi 1622956496 664 KDLSDLTAQAKSR 676
Cdd:COG4913 769 ENLEERIDALRAR 781
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
448-651 |
4.43e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 4.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 448 LTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESirqwklkhkKLERALEKQSETVDELTGKNNQILKEKD 527
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLV---------DLSEEAKLLLQQLSELESQLAEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 528 ELKTQMYAALQQIENLRKELNDVLTKRALQE--EELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQS-KIQS 604
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQSPVIQQlrAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAqRILA 316
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1622956496 605 QMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANK 651
Cdd:COG3206 317 SLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVA 363
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
557-828 |
5.11e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.40 E-value: 5.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 557 QEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESElkkQSKIQSQMKVE-----------------KAHLEEEIAE 619
Cdd:pfam01576 3 QEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEE---KNALQEQLQAEtelcaeaeemrarlaarKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 620 LKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQ---LKLERDVHQR 696
Cdd:pfam01576 80 LESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQnskLSKERKLLEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 697 ELKDLTS----------SLQSVKTKHEQNIQELMKHFKKE---KSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCD 763
Cdd:pfam01576 160 RISEFTSnlaeeeekakSLSKLKNKHEAMISDLEERLKKEekgRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLA 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622956496 764 RLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESI 828
Cdd:pfam01576 240 KKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEAL 304
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
184-397 |
5.39e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 5.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 184 NRELSRRSRSDAETKRTLEELTEKLNEAQKQEvvsDRVERRLQELEREMRTerelVERRQDQLGLMSLQLQEALKKQEAK 263
Cdd:COG4942 40 EKELAALKKEEKALLKQLAALERRIAALARRI---RALEQELAALEAELAE----LEKEIAELRAELEAQKEELAELLRA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 264 ADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQD 343
Cdd:COG4942 113 LYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEA 192
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1622956496 344 EQGEDWRFRRGVEREKQDLEKQMSDLRVQlnfnamASELEEVKRCMERKDKEKA 397
Cdd:COG4942 193 LKAERQKLLARLEKELAELAAELAELQQE------AEELEALIARLEAEAAAAA 240
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
219-484 |
5.65e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.06 E-value: 5.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 219 DRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKK---------------------QEAKADEHEGAIKNKLIQ 277
Cdd:pfam12128 600 EELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREetfartalknarldlrrlfdeKQSEKDKKNKALAERKDS 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 278 TETEKNQLEQELE-LSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRK---------------GLQHQVSQISKQQSNY 341
Cdd:pfam12128 680 ANERLNSLEAQLKqLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDaqlallkaaiaarrsGAKAELKALETWYKRD 759
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 342 QDEQGEDWRFRRGVEREKQDLEKQMSDLRVQ----------------LNFNAMASELEEVKRCMERKDKEKAHLASQVEI 405
Cdd:pfam12128 760 LASLGVDPDVIAKLKREIRTLERKIERIAVRrqevlryfdwyqetwlQRRPRLATQLSNIERAISELQQQLARLIADTKL 839
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 406 LTRELENGEKQQLQMLDRLKEiqNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQ-QSEALKEEAEKRREDLK 484
Cdd:pfam12128 840 RRAKLEMERKASEKQQVRLSE--NLRGLRCEMSKLATLKEDANSEQAQGSIGERLAQLEDLKlKRDYLSESVKKYVEHFK 917
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
351-982 |
6.90e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.81 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 351 FRRGVEREKQDLEKQMSDLRVQ----LNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKE 426
Cdd:pfam02463 168 KRKKKEALKKLIEETENLAELIidleELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLR 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 427 IQNHFDTCEAERKHADLQISElTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLK-HKKLERAL 505
Cdd:pfam02463 248 DEQEEIESSKQEIEKEEEKLA-QVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKeSEKEKKKA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 506 EKQSETVDEltgKNNQILKEKDELKTQMYAALQQIENLRKelndvltkraLQEEELHSKEEKLRDIKSHQADLELEVKns 585
Cdd:pfam02463 327 EKELKKEKE---EIEELEKELKELEIKREAEEEEEEELEK----------LQEKLEQLEEELLAKKKLESERLSSAAK-- 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 586 ldtihRLESELKKQSKIQSQMKvEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKD 665
Cdd:pfam02463 392 -----LKEEELELKSEEEKEAQ-LLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDEL 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 666 LSDLTAQAKSRDEETATVITQLKLERDVHQRELkdltSSLQSVKTKHEQNIQELMKHFKKEKSEAENHIRTLKAESLE-E 744
Cdd:pfam02463 466 ELKKSEDLLKETQLVKLQEQLELLLSRQKLEER----SQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVEnY 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 745 KNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETE 824
Cdd:pfam02463 542 KVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKR 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 825 QESILGVIGKEIDAACKTFSKDSMEKLKVFSSGPDIHYDPHRWLAESKTKLQWLCEELKERENREKNLRHQLMLCRQQVR 904
Cdd:pfam02463 622 AKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEI 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 905 NVTE-HKESELQCLFQQIERQEQLLDEI--HREKRDLLEETQRKDEEMGSLQPKLLFKLPPWEDASQTAVRNQSEAQLEE 981
Cdd:pfam02463 702 KKKEqREKEELKKLKLEAEELLADRVQEaqDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEERE 781
|
.
gi 1622956496 982 K 982
Cdd:pfam02463 782 K 782
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
195-555 |
7.36e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 195 AETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKNK 274
Cdd:COG4717 135 EALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEE 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 275 LIQTETEKNQLEQELE-LSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQI------------------S 335
Cdd:COG4717 215 LEEAQEELEELEEELEqLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIagvlflvlgllallflllA 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 336 KQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNAmaSELEEVKRCMERKDKEKAHLASQVEILTRELENGEK 415
Cdd:COG4717 295 REKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSP--EELLELLDRIEELQELLREAEELEEELQLEELEQEI 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 416 QQL---------QMLDRLKEIQNHFDTCEAERKHADLQISEL--TRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLK 484
Cdd:COG4717 373 AALlaeagvedeEELRAALEQAEEYQELKEELEELEEQLEELlgELEELLEALDEEELEEELEELEEELEELEEELEELR 452
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622956496 485 LKAQEsiRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRA 555
Cdd:COG4717 453 EELAE--LEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLPPVLERA 521
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
174-588 |
7.74e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.98 E-value: 7.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 174 SEQIRLGDDFNRElSRRSRSDAETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQL 253
Cdd:PTZ00121 1479 AEEAKKADEAKKK-AEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEEL 1557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 254 QEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQE-LELSRKLLNQSEGSRETLLHQVEELRA---QLTIAEGDRKGLQH 329
Cdd:PTZ00121 1558 KKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEArIEEVMKLYEEEKKMKAEEAKKAEEAKIkaeELKKAEEEKKKVEQ 1637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 330 QVSQISKQQSNYQD--EQGEDWRFRRGVEREKQDLEKQMSDlrvqlnfnaMASELEEVKRCMERKDKEKAHLASQVEILT 407
Cdd:PTZ00121 1638 LKKKEAEEKKKAEElkKAEEENKIKAAEEAKKAEEDKKKAE---------EAKKAEEDEKKAAEALKKEAEEAKKAEELK 1708
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 408 RELENGEKQQLQMldRLKEIQNHFDTCEAERKHadlqiSELTRHAEDATKQAEqylsELQQSEALKEEAEKRREDLKlKA 487
Cdd:PTZ00121 1709 KKEAEEKKKAEEL--KKAEEENKIKAEEAKKEA-----EEDKKKAEEAKKDEE----EKKKIAHLKKEEEKKAEEIR-KE 1776
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 488 QESIRQWKLKHKKLERALEKQ---------SETVDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQE 558
Cdd:PTZ00121 1777 KEAVIEEELDEEDEKRRMEVDkkikdifdnFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNK 1856
|
410 420 430
....*....|....*....|....*....|.
gi 1622956496 559 EELHSKE-EKLRDIKSHQADLELEVKNSLDT 588
Cdd:PTZ00121 1857 NNENGEDgNKEADFNKEKDLKEDDEEEIEEA 1887
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
219-571 |
8.37e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 8.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 219 DRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEhegaikNKLIQTETEKNQLEQELElsrkLLNQ 298
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDE------IDVASAEREIAELEAELE----RLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 299 SEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEdwrfrrgvEREKQDLEKQMSDLRVQLNFNAM 378
Cdd:COG4913 683 SSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDE--------LQDRLEAAEDLARLELRALLEER 754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 379 ASELeevkrcmerkdKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFdtceaeRKHADLQISELTRHAEDatkq 458
Cdd:COG4913 755 FAAA-----------LGDAVERELRENLEERIDALRARLNRAEEELERAMRAF------NREWPAETADLDADLES---- 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 459 AEQYLSELQQseaLKEE--AEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELtgknNQILKEKD--------- 527
Cdd:COG4913 814 LPEYLALLDR---LEEDglPEYEERFKELLNENSIEFVADLLSKLRRAIREIKERIDPL----NDSLKRIPfgpgrylrl 886
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1622956496 528 ELKTQMYAALQQienLRKELNDVLTKRALQEEELH-SKEEKLRDI 571
Cdd:COG4913 887 EARPRPDPEVRE---FRQELRAVTSGASLFDEELSeARFAALKRL 928
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
466-617 |
9.57e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 43.16 E-value: 9.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 466 LQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELtgknnqilkEKDELKTQMYAALQQIENLRK 545
Cdd:PRK12705 25 LKKRQRLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARR---------EREELQREEERLVQKEEQLDA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 546 ELNDVltkrALQEEELHSKEEKL------RDIKSHQADLELEVKNSLDT-------IHRLESELKKQSKIQSQMKVEKAH 612
Cdd:PRK12705 96 RAEKL----DNLENQLEEREKALsareleLEELEKQLDNELYRVAGLTPeqarkllLKLLDAELEEEKAQRVKKIEEEAD 171
|
....*
gi 1622956496 613 LEEEI 617
Cdd:PRK12705 172 LEAER 176
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
409-1023 |
1.12e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.29 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 409 ELENGEKQQLQMLDrlKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSE-LQQSEALKEEAEKRREDLKLkA 487
Cdd:pfam12128 283 ETSAELNQLLRTLD--DQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDAdIETAAADQEQLPSWQSELEN-L 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 488 QESIRQWKLKHKKLERALEKQ-----SETVDELTGKNNQ---ILKEKDELKTQMYAALQQIEN-LRKELNDVLTKRALQE 558
Cdd:pfam12128 360 EERLKALTGKHQDVTAKYNRRrskikEQNNRDIAGIKDKlakIREARDRQLAVAEDDLQALESeLREQLEAGKLEFNEEE 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 559 EELHSK--EEKLR-DIKSHQADLELEVKNSLDTIHRLESELKKQSKiqsqmKVEKAHLEEEIAELKKSQAQDK-----AK 630
Cdd:pfam12128 440 YRLKSRlgELKLRlNQATATPELLLQLENFDERIERAREEQEAANA-----EVERLQSELRQARKRRDQASEAlrqasRR 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 631 LLEMQESIKDLSAIRADLANKLAEEERAKKAVLK---------------DLSDLTAQAKSRDEETATVITqLKLER---- 691
Cdd:pfam12128 515 LEERQSALDELELQLFPQAGTLLHFLRKEAPDWEqsigkvispellhrtDLDPEVWDGSVGGELNLYGVK-LDLKRidvp 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 692 ------DVHQRELKDLTSSLQSVKTKHEQNIQELM---KHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDK----L 758
Cdd:pfam12128 594 ewaaseEELRERLDKAEEALQSAREKQAAAEEQLVqanGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKknkaL 673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 759 KSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEArlQLKDQLLCLETEQESILGVIGKEIDA 838
Cdd:pfam12128 674 AERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEG--ALDAQLALLKAAIAARRSGAKAELKA 751
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 839 aCKTFSKDSMEKLKVfssgpdihyDPhrwlaesktklqwlcEELKERENREKNLRHQLMLCRQQVRNVTEHKESELQCLF 918
Cdd:pfam12128 752 -LETWYKRDLASLGV---------DP---------------DVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWL 806
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 919 QQIERQEQLLDEIHREKRDLLEETQRKDEEMGSLQPKLLFKLPPWEDASQTAVRNQSEAQLE-EKADRVIALETSTRVAL 997
Cdd:pfam12128 807 QRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEmSKLATLKEDANSEQAQG 886
|
650 660
....*....|....*....|....*.
gi 1622956496 998 dhleSVPEKLSLLEDFKDFRDSCSSS 1023
Cdd:pfam12128 887 ----SIGERLAQLEDLKLKRDYLSES 908
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
157-819 |
1.27e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.89 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 157 DDMTQLHAFHQSLRDLSSEQIRLGDDFNRELSRrSRSDAETKRTLEELTEK-----LNEAQKQEVVSDRVERRLQELERE 231
Cdd:pfam10174 67 EENQHLQLTIQALQDELRAQRDLNQLLQQDFTT-SPVDGEDKFSTPELTEEnfrrlQSEHERQAKELFLLRKTLEEMELR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 232 MRTERELVERRQDQLGLMSLQLQEalKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSretlLHQVE 311
Cdd:pfam10174 146 IETQKQTLGARDESIKKLLEMLQS--KGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREE----LHRRN 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 312 ELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFNA-MASELEEVKRCME 390
Cdd:pfam10174 220 QLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKfMKNKIDQLKQELS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 391 RKDKEKAHLASQVEILTreleNGEKQQLQMLDRLKE-----------IQNHFDTCEAERKHADLQISELTRHAEDATKQA 459
Cdd:pfam10174 300 KKESELLALQTKLETLT----NQNSDCKQHIEVLKEsltakeqraaiLQTEVDALRLRLEEKESFLNKKTKQLQDLTEEK 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 460 EQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLE------RALEKQSETVDELTGKNNQILKEKDE----L 529
Cdd:pfam10174 376 STLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAglkervKSLQTDSSNTDTALTTLEEALSEKERiierL 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 530 KTQM----YAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQ----SK 601
Cdd:pfam10174 456 KEQReredRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKkeecSK 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 602 IQSQMKveKAHlEEEIAELKKSQAQDKAKLLEmqesiKDLSAIRADLANKLAEEERakkaVLKDLSDLTAQAKSRDEETA 681
Cdd:pfam10174 536 LENQLK--KAH-NAEEAVRTNPEINDRIRLLE-----QEVARYKEESGKAQAEVER----LLGILREVENEKNDKDKKIA 603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 682 TVitqlkleRDVHQRELKDltsslQSVKTKHEQNIQELMKhfKKEKSEAENHIRtlkaeslEEKNMAKVHRgqldklKSQ 761
Cdd:pfam10174 604 EL-------ESLTLRQMKE-----QNKKVANIKHGQQEMK--KKGAQLLEEARR-------REDNLADNSQ------QLQ 656
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622956496 762 CDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLL 819
Cdd:pfam10174 657 LEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQEAL 714
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
609-793 |
1.34e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 609 EKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQL- 687
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALy 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 688 -------KLERDVHQRELKDLTSSLQSVKTKHEQNiQELMKHFKKEKSEAENH---IRTLKAESLEEKNMAKVHRGQLDK 757
Cdd:COG3883 97 rsggsvsYLDVLLGSESFSDFLDRLSALSKIADAD-ADLLEELKADKAELEAKkaeLEAKLAELEALKAELEAAKAELEA 175
|
170 180 190
....*....|....*....|....*....|....*.
gi 1622956496 758 LKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEER 793
Cdd:COG3883 176 QQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAA 211
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
550-754 |
1.37e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 550 VLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKA 629
Cdd:COG3883 7 AAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERRE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 630 KLLE----MQESIKDLSAI--------------RADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLER 691
Cdd:COG3883 87 ELGEraraLYRSGGSVSYLdvllgsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAEL 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 692 DVHQRELKDLTSSLQSVKTKHEQNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQ 754
Cdd:COG3883 167 EAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAA 229
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
591-1012 |
1.60e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 591 RLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANklAEEERAKKAVLKDLSDLT 670
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEE--LREELEKLEKLLQLLPLY 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 671 AQAKSRDEETATVITQLKLERDvHQRELKDLTSSLQSVKTKHEQNIQELMKHFKKEKSEAENHIRTLKAEsleeknmakv 750
Cdd:COG4717 132 QELEALEAELAELPERLEELEE-RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE---------- 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 751 hrgqLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEH-LRRTEEARLQLKDQLLCLETEQESIL 829
Cdd:COG4717 201 ----LEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARlLLLIAAALLALLGLGGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 830 GVIGKEIDAACKTFSKDSMEKLKVFSSGPDIHYDPHRWLAESKTKLQWLCEELKERENREKNLRHQLMLCRQQVRNVTEH 909
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 910 KESELQCLFQQIE-RQEQLLDEIH-------REKRDLLEETQRKDEEMGSLQPKLLFKLPPWEDASQTAVRNQSEAQLEE 981
Cdd:COG4717 357 EELEEELQLEELEqEIAALLAEAGvedeeelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEE 436
|
410 420 430
....*....|....*....|....*....|.
gi 1622956496 982 KADRVIALETSTRVALDHLESVPEKLSLLED 1012
Cdd:COG4717 437 LEEELEELEEELEELREELAELEAELEQLEE 467
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
201-391 |
1.62e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 201 LEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQdQLGLMSLQLQEALKKQEAKADEHEgaiknKLIQTET 280
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLA-EYSWDEIDVASAEREIAELEAELE-----RLDASSD 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 281 EKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQ 360
Cdd:COG4913 686 DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER 765
|
170 180 190
....*....|....*....|....*....|.
gi 1622956496 361 DLEKQMSDLRVQLNfNAMASELEEVKRCMER 391
Cdd:COG4913 766 ELRENLEERIDALR-ARLNRAEEELERAMRA 795
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
485-719 |
1.89e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 485 LKAQESIRQWKLKHKKLERALEKQSETVDELTGknnqilkEKDELKTQMYAALQQIENLRKELND------VLTKRALQe 558
Cdd:PRK04863 344 LRQQEKIERYQADLEELEERLEEQNEVVEEADE-------QQEENEARAEAAEEEVDELKSQLADyqqaldVQQTRAIQ- 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 559 eeLHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQS----KIQSQMKVEKAHLE--EEIAEL--------KKSQ 624
Cdd:PRK04863 416 --YQQAVQALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATeellSLEQKLSVAQAAHSqfEQAYQLvrkiagevSRSE 493
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 625 AQDKAK-LLEMQESIKDLSAIRADLANKLAEEER--AKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDL 701
Cdd:PRK04863 494 AWDVAReLLRRLREQRHLAEQLQQLRMRLSELEQrlRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSES 573
|
250
....*....|....*...
gi 1622956496 702 TSSLQSVKTKHEQNIQEL 719
Cdd:PRK04863 574 VSEARERRMALRQQLEQL 591
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
510-639 |
1.95e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.38 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 510 ETVDELTGKNNQILKEKDEL-KTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLElevkNSLDT 588
Cdd:COG0542 411 EELDELERRLEQLEIEKEALkKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEEIQELKEELE----QRYGK 486
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622956496 589 IHRLESELKK-QSKIQSQMKVEKAHL-EEEIAE---------LKKSQAQDKAKLLEMQESIK 639
Cdd:COG0542 487 IPELEKELAElEEELAELAPLLREEVtEEDIAEvvsrwtgipVGKLLEGEREKLLNLEEELH 548
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
560-721 |
2.30e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 560 ELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQeSIK 639
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVR-NNK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 640 DLSAIradlankLAEEERAKKAvLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQEL 719
Cdd:COG1579 90 EYEAL-------QKEIESLKRR-ISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEEL 161
|
..
gi 1622956496 720 MK 721
Cdd:COG1579 162 EA 163
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
501-670 |
2.31e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 501 LERALEKQSETVDELTGKNNQILKEKDElktqmyaalqqienlrkelndvlTKRALQEEELHSKEEKLRDIKSHQADLEL 580
Cdd:COG2433 378 IEEALEELIEKELPEEEPEAEREKEHEE-----------------------RELTEEEEEIRRLEEQVERLEAEVEELEA 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 581 EVKNSLDTIHRLESELKK-QSKIQSQMKVEKA--HLEEEIAELKKsqaqdkaKLLEMQESIKDLSAIRADLANKLAEEER 657
Cdd:COG2433 435 ELEEKDERIERLERELSEaRSEERREIRKDREisRLDREIERLER-------ELEEERERIEELKRKLERLKELWKLEHS 507
|
170
....*....|...
gi 1622956496 658 AKKAVLKDLSDLT 670
Cdd:COG2433 508 GELVPVKVVEKFT 520
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
272-489 |
2.52e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 272 KNKLIQTETEKNQL-------EQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDE 344
Cdd:pfam15921 684 RNKSEEMETTTNKLkmqlksaQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKE 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 345 qgedwrfRRGVEREKQDLEKQMSDlrVQLNFNAMASELEeVKRCMERKDKEKA------------HLASQVEILTRELEN 412
Cdd:pfam15921 764 -------KHFLKEEKNKLSQELST--VATEKNKMAGELE-VLRSQERRLKEKVanmevaldkaslQFAECQDIIQRQEQE 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 413 GEKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAED--ATKQAEQYLS-ELQQSEALKEEAEKrreDLKLKAQE 489
Cdd:pfam15921 834 SVRLKLQHTLDVKELQGPGYTSNSSMKPRLLQPASFTRTHSNvpSSQSTASFLShHSRKTNALKEDPTR---DLKQLLQE 910
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
422-622 |
2.59e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 422 DRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQAEQYLSELQQS-EALKEEAEKrredlkLKAQESIRQWKLKhkK 500
Cdd:PHA02562 174 DKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKyDELVEEAKT------IKAEIEELTDELL--N 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 501 LERALEKQSETVDELTGKNNQILKEKDELK--TQMY-------AALQQIE--------------NLRKELNDVLTKRalq 557
Cdd:PHA02562 246 LVMDIEDPSAALNKLNTAAAKIKSKIEQFQkvIKMYekggvcpTCTQQISegpdritkikdklkELQHSLEKLDTAI--- 322
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622956496 558 eEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKK 622
Cdd:PHA02562 323 -DELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQD 386
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
169-344 |
3.09e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 169 LRDLSSEQIRLGDDFNRELSRRSRSDAETK--RTLEELTEKLNEAQKQEVVSDRVERRLQELERemrtERELVERRQDQL 246
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDalQERREALQRLAEYSWDEIDVASAEREIAELEA----ELERLDASSDDL 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 247 GLMSLQLqEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQ-VEELRAQLTIAE---G 322
Cdd:COG4913 688 AALEEQL-EELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAlLEERFAAALGDAverE 766
|
170 180
....*....|....*....|..
gi 1622956496 323 DRKGLQHQVSQISKQQSNYQDE 344
Cdd:COG4913 767 LRENLEERIDALRARLNRAEEE 788
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
191-791 |
3.19e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 191 SRSDAetKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEA------LKKQEAKA 264
Cdd:PRK04863 490 SRSEA--WDVARELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEdeleqlQEELEARL 567
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 265 DEHEgAIKNKLIQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDE 344
Cdd:PRK04863 568 ESLS-ESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVE 646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 345 qgedwrfRRGVEREKQDLEKQMSDLRvqlnfNAMASELEEVKRCMERKDKEK-AHLASQVE-----------------IL 406
Cdd:PRK04863 647 -------RDELAARKQALDEEIERLS-----QPGGSEDPRLNALAERFGGVLlSEIYDDVSledapyfsalygparhaIV 714
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 407 TRELEnGEKQQLQMLDRLKE----IQ--------NHFDTCEAER------KHADLQISELTRHAEDATKQAEQYLSELQ- 467
Cdd:PRK04863 715 VPDLS-DAAEQLAGLEDCPEdlylIEgdpdsfddSVFSVEELEKavvvkiADRQWRYSRFPEVPLFGRAAREKRIEQLRa 793
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 468 QSEALKEEAEKRREDLKL--KAQESIRQWKLKH-------------KKLERALEKQSETVDELTGKNNQILKEKDELKTQ 532
Cdd:PRK04863 794 EREELAERYATLSFDVQKlqRLHQAFSRFIGSHlavafeadpeaelRQLNRRRVELERALADHESQEQQQRSQLEQAKEG 873
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 533 MyAALQQIENLRKELND-VLTKRALQ-EEELHSKEEKLRDIKSHQAdlelevknsldTIHRLESELkkqSKIQSQmkvek 610
Cdd:PRK04863 874 L-SALNRLLPRLNLLADeTLADRVEEiREQLDEAEEAKRFVQQHGN-----------ALAQLEPIV---SVLQSD----- 933
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 611 ahlEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANkLAEEERAKkaVLKDLSDLTAQAKSRDEETATVITQLKLE 690
Cdd:PRK04863 934 ---PEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAH-FSYEDAAE--MLAKNSDLNEKLRQRLEQAEQERTRAREQ 1007
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 691 RDVHQRELKDLT---SSLQSVKTKHEQNIQELMKHFKK----EKSEAENHIRTLKAESLEEKNMAKVHRGQLDKlksQCD 763
Cdd:PRK04863 1008 LRQAQAQLAQYNqvlASLKSSYDAKRQMLQELKQELQDlgvpADSGAEERARARRDELHARLSANRSRRNQLEK---QLT 1084
|
650 660
....*....|....*....|....*...
gi 1622956496 764 RLTEELTQNENENKKLKLKYQCLKDQLE 791
Cdd:PRK04863 1085 FCEAEMDNLTKKLRKLERDYHEMREQVV 1112
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
210-639 |
3.19e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 41.96 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 210 EAQKQEVVSDRVERRLQELEREMRTEREL--VERRQDQLGLMSLQLQEALKKQEAKADEhegaIKNKLIQTETEKNQLEQ 287
Cdd:TIGR00606 690 EAELQEFISDLQSKLRLAPDKLKSTESELkkKEKRRDEMLGLAPGRQSIIDLKEKEIPE----LRNKLQKVNRDIQRLKN 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 288 ELELSRKLLnqseGSRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEdwRFRRGVEREKQDLEKQms 367
Cdd:TIGR00606 766 DIEEQETLL----GTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLD--RTVQQVNQEKQEKQHE-- 837
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 368 dlrvqlnFNAMASELEEVKRCMERKDKEKAHLASQV-EILTRELENGE--KQQLQMLDRLKEIQNHFDTCEAERKHADLQ 444
Cdd:TIGR00606 838 -------LDTVVSKIELNRKLIQDQQEQIQHLKSKTnELKSEKLQIGTnlQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 445 ISELTRHAEDATKQAEQYLSElqqsealKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKqsetvdeltGKNNQILK 524
Cdd:TIGR00606 911 DSPLETFLEKDQQEKEELISS-------KETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQD---------GKDDYLKQ 974
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 525 EKDELKTqMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDikshqadlELEVKNSLDTIHRLESELKKQSKIQS 604
Cdd:TIGR00606 975 KETELNT-VNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQD--------NLTLRKRENELKEVEEELKQHLKEMG 1045
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1622956496 605 QMKV-----EKAHLEEEIAELKKSQAQDKAKLLEMQESIK 639
Cdd:TIGR00606 1046 QMQVlqmkqEHQKLEENIDLIKRNHVLALGRQKGYEKEIK 1085
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
353-545 |
3.25e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 353 RGVEREKQDLEKQMSDLRV----QLNFNAMASELEEVKRCMERKDKEKAHLAsqVEILTRELENGEKQQLQMLDRLKEIQ 428
Cdd:COG4913 238 ERAHEALEDAREQIELLEPirelAERYAAARERLAELEYLRAALRLWFAQRR--LELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 429 NHFDTCEAERKHADLQISEL-TRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEK 507
Cdd:COG4913 316 ARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
170 180 190
....*....|....*....|....*....|....*...
gi 1622956496 508 QSETVDELTGKNNQILKEKDELKTQMYAALQQIENLRK 545
Cdd:COG4913 396 LEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
201-600 |
3.43e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 201 LEELTEKLNE-AQKQEVVSDRVERRLQELEREmrteRELVERRQDQLGLMSLQLQEALKKQEAKADEHEGAIKNKLIQTE 279
Cdd:pfam07888 36 LEECLQERAElLQAQEAANRQREKEKERYKRD----REQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 280 TEKNQleqelelsrkllnqsegsRETLLHQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREK 359
Cdd:pfam07888 112 ELSEE------------------KDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAER 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 360 QDLEKQMSDLRVQLnfNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQMLDRLKEIQNHFDTCEAERK 439
Cdd:pfam07888 174 KQLQAKLQQTEEEL--RSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASER 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 440 HADLQISELtrhaEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELtgkN 519
Cdd:pfam07888 252 KVEGLGEEL----SSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKL---S 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 520 NQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQ 599
Cdd:pfam07888 325 AELQRLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLETV 404
|
.
gi 1622956496 600 S 600
Cdd:pfam07888 405 A 405
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
518-956 |
3.47e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 518 KNNQILKEKDELKTQMYAALQQIENLRKELNDvltkralQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELK 597
Cdd:TIGR04523 34 EEKQLEKKLKTIKNELKNKEKELKNLDKNLNK-------DEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 598 KQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKlaeeerakkavlkdlsdltaqaksrD 677
Cdd:TIGR04523 107 KINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNK-------------------------Y 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 678 EETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQELMKHFKKEKSeaenhIRTLKAESLEEKNMAKVHRGQLDK 757
Cdd:TIGR04523 162 NDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQK-----NKSLESQISELKKQNNQLKDNIEK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 758 LKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREKHISIEEEHLRRTEEARLQLKDQLLCLETEQESilgvigkeid 837
Cdd:TIGR04523 237 KQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQ---------- 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 838 aacktfskdsmeklkvfssgpDIHYDPHRWLAESKTKLQWLCEELKERENREKNLRHQLmlcrQQVRNVTEHKESELQCL 917
Cdd:TIGR04523 307 ---------------------DWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQI----SQLKKELTNSESENSEK 361
|
410 420 430
....*....|....*....|....*....|....*....
gi 1622956496 918 FQQIERQEQLLDEIHREKRDLLEETQRKDEEMGSLQPKL 956
Cdd:TIGR04523 362 QRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKI 400
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
464-759 |
3.56e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 3.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 464 SELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAALQQIENL 543
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 544 RKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELkks 623
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESL--- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 624 qaQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTS 703
Cdd:COG4372 163 --QEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLD 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622956496 704 SLQSVKTKHEQNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLK 759
Cdd:COG4372 241 ALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELK 296
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
201-448 |
3.74e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 201 LEELTEKLNEAQkqEVVSDRVERRLQELEREMRTERE------------------------------LVERRQDQLGLMS 250
Cdd:PRK04863 357 LEELEERLEEQN--EVVEEADEQQEENEARAEAAEEEvdelksqladyqqaldvqqtraiqyqqavqALERAKQLCGLPD 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 251 LQL------QEALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQSEGS------RETLLH---------Q 309
Cdd:PRK04863 435 LTAdnaedwLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSeawdvaRELLRRlreqrhlaeQ 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 310 VEELRAQLTIAEGD---RKGLQHQVSQISKQQSNYQDEQGEDWRFRRGVEREKQDLEKQMSDLRVQlnFNAMASELEEVK 386
Cdd:PRK04863 515 LQQLRMRLSELEQRlrqQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARER--RMALRQQLEQLQ 592
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 387 RCMER-KDKEKAHLASQvEILTR-------ELENGE---KQQLQMLDRLKEIQNHFDTCEAERKHADLQISEL 448
Cdd:PRK04863 593 ARIQRlAARAPAWLAAQ-DALARlreqsgeEFEDSQdvtEYMQQLLERERELTVERDELAARKQALDEEIERL 664
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
587-793 |
3.78e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 587 DTIHRLESELK----KQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKK-- 660
Cdd:PHA02562 174 DKIRELNQQIQtldmKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEdp 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 661 -AVLKDLSDLTAQAKSRDEETATVI-------------TQLKLERDVHQR---ELKDLTSSLQSVKTkHEQNIQELMKHF 723
Cdd:PHA02562 254 sAALNKLNTAAAKIKSKIEQFQKVIkmyekggvcptctQQISEGPDRITKikdKLKELQHSLEKLDT-AIDELEEIMDEF 332
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 724 ---KKEKSEAENHIRTLKAESLEEKNMAKVHRGQLDKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEER 793
Cdd:PHA02562 333 neqSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHR 405
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
278-633 |
5.13e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.19 E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 278 TETEKNQLEQELEL--SRKLLNQSEgsretllhQVEELRAQLTIAEgDRKGLQHQVSQISKQQSNYqdeqgedwrfrrgv 355
Cdd:PRK10929 21 TAPDEKQITQELEQakAAKTPAQAE--------IVEALQSALNWLE-ERKGSLERAKQYQQVIDNF-------------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 356 EREKQDLEKQMSDLR---VQLNFNAMASELEEvkrcmerkdkEKAHLASQVEILTRELengekQQLQmlDRLKEIQNHFD 432
Cdd:PRK10929 78 PKLSAELRQQLNNERdepRSVPPNMSTDALEQ----------EILQVSSQLLEKSRQA-----QQEQ--DRAREISDSLS 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 433 TCEAERKHADLQISELTR--------------------HAEDATKQA---EQYLSEL-----QQSEALKEE-AEKRREDL 483
Cdd:PRK10929 141 QLPQQQTEARRQLNEIERrlqtlgtpntplaqaqltalQAESAALKAlvdELELAQLsannrQELARLRSElAKKRSQQL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 484 KLKAQE------SIRQwklkhKKLERALE-----------------KQSETVDELTGKNNQILKEKDELKTQMYAALQQI 540
Cdd:PRK10929 221 DAYLQAlrnqlnSQRQ-----REAERALEstellaeqsgdlpksivAQFKINRELSQALNQQAQRMDLIASQQRQAASQT 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 541 ENLRKELNDV------LTKRALQEEELHSKEEKLRDI-KSHQAD---LELEVKnsldtihRL--ESELKKQSKIQSQMKV 608
Cdd:PRK10929 296 LQVRQALNTLreqsqwLGVSNALGEALRAQVARLPEMpKPQQLDtemAQLRVQ-------RLryEDLLNKQPQLRQIRQA 368
|
410 420
....*....|....*....|....*
gi 1622956496 609 EKAHLEEEIAELKKSQAQDKAKLLE 633
Cdd:PRK10929 369 DGQPLTAEQNRILDAQLRTQRELLN 393
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
470-744 |
5.65e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 40.80 E-value: 5.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 470 EALKEEAEKRREDL-KLKAQESIRQWKLKHKKLERALEKQSETvdeltgknnqilKEKDELKTQmyaalqqienlRKELN 548
Cdd:PTZ00108 1105 EKLNAELEKKEKELeKLKNTTPKDMWLEDLDKFEEALEEQEEV------------EEKEIAKEQ-----------RLKSK 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 549 DVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDK 628
Cdd:PTZ00108 1162 TKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVK 1241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 629 AKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSV 708
Cdd:PTZ00108 1242 RLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAAL 1321
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1622956496 709 KTKHEQNI---------QELMKHFKKEKSEAENHIRTLKAESLEE 744
Cdd:PTZ00108 1322 KKKKKSEKktarkkkskTRVKQASASQSSRLLRRPRKKKSDSSSE 1366
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
435-546 |
5.67e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 5.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 435 EAERKHADLQ----ISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSE 510
Cdd:PRK12704 52 EAIKKEALLEakeeIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEE 131
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 511 TVDELTGKNNQILKE-----------------KDELKTQMYAALQQIENLRKE 546
Cdd:PRK12704 132 ELEELIEEQLQELERisgltaeeakeillekvEEEARHEAAVLIKEIEEEAKE 184
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
184-570 |
5.73e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.79 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 184 NRELSRRSRSDAETKRtlEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALkkqeak 263
Cdd:PRK02224 347 LREDADDLEERAEELR--EEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELR------ 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 264 adEHEGAIKNKLIQTETEKNQLEQELELSRKLLNQS---------EGSreTLLHQVEELRAQLTIAEGDRKGLQHQVSQI 334
Cdd:PRK02224 419 --EERDELREREAELEATLRTARERVEEAEALLEAGkcpecgqpvEGS--PHVETIEEDRERVEELEAELEDLEEEVEEV 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 335 SKQQSNYQDEQGEDWRFRRGVEReKQDLEKQMSDLRvqlnfnamaSELEEVKRCMERKDKEKAHLASQVEILTRELENGE 414
Cdd:PRK02224 495 EERLERAEDLVEAEDRIERLEER-REDLEELIAERR---------ETIEEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 415 KQQLQMLDRLKEIQNHFDTCEAERKHADlQISELTRHAEDATKQAE------QYLSEL--QQSEALKEEAEKRREDLKLK 486
Cdd:PRK02224 565 EEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIErlrekrEALAELndERRERLAEKRERKRELEAEF 643
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 487 AQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKtqmyAALQQIENLRKELnDVLTKRALQEEELHSKEE 566
Cdd:PRK02224 644 DEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVE----NELEELEELRERR-EALENRVEALEALYDEAE 718
|
....
gi 1622956496 567 KLRD 570
Cdd:PRK02224 719 ELES 722
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
196-316 |
6.18e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 6.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 196 ETKRTLEElTEKLNEAQKQEVVS---DRVERRLQELEREMRTERELVERRQDQLGLMSLQL---QEALKKQEAKADEHEG 269
Cdd:PRK12704 39 EAKRILEE-AKKEAEAIKKEALLeakEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLdrkLELLEKREEELEKKEK 117
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1622956496 270 AIKNKL-----IQTETEKNQLEQELELSRKLLNQSEGSRETLLHQVE-ELRAQ 316
Cdd:PRK12704 118 ELEQKQqelekKEEELEELIEEQLQELERISGLTAEEAKEILLEKVEeEARHE 170
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
459-671 |
6.93e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 40.17 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 459 AEQYlSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELtgKNNQILKEKDELKTQMYAAlq 538
Cdd:PRK09510 61 VEQY-NRQQQQQKSAKRAEEQRKKKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQ--KKQAEEAAKQAALKQKQAE-- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 539 qiENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHLEEEIA 618
Cdd:PRK09510 136 --EAAAKAAAAAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAA 213
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1622956496 619 ELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAKKAVLKD--LSDLTA 671
Cdd:PRK09510 214 EAKKKAAAEAKAAAAKAAAEAKAAAEKAAAAKAAEKAAAAKAAAEVDdlFGGLDS 268
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
255-580 |
7.20e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 40.61 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 255 EALKKQEAKADEHEGAIKNKLIQTETEKNQLEQELELSRKLlnQSEGSRETLLHQVEELraqltiaegdrkglqhqvsqi 334
Cdd:PLN03229 439 EKLKEQILKAKESSSKPSELALNEMIEKLKKEIDLEYTEAV--IAMGLQERLENLREEF--------------------- 495
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 335 SKQQSNyqdEQGEDWRFRRGVEREKQDLEKQMSD------LRVQLNfnaMASELEEVKRCMERKDK-------------- 394
Cdd:PLN03229 496 SKANSQ---DQLMHPVLMEKIEKLKDEFNKRLSRapnylsLKYKLD---MLNEFSRAKALSEKKSKaeklkaeinkkfke 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 395 --EKAHLASQVEILTRELENGEKQQLQMLDR-LKEiqnhfdTCEAERKHADLQISELTRHAE---DATKQAEQYLSELQQ 468
Cdd:PLN03229 570 vmDRPEIKEKMEALKAEVASSGASSGDELDDdLKE------KVEKMKKEIELELAGVLKSMGlevIGVTKKNKDTAEQTP 643
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 469 SEALKEEAEKRREDLKLKAQESIRQWKLKHK----KLERAleKQSETVDELTgkNNQILKEKDELKTQMYAAL------Q 538
Cdd:PLN03229 644 PPNLQEKIESLNEEINKKIERVIRSSDLKSKiellKLEVA--KASKTPDVTE--KEKIEALEQQIKQKIAEALnsselkE 719
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1622956496 539 QIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLEL 580
Cdd:PLN03229 720 KFEELEAELAAARETAAESNGSLKNDDDKEEDSKEDGSRVEV 761
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
182-620 |
7.67e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.71 E-value: 7.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 182 DFNRELSRRSRSDAETKRTLEELTEKLNEaqkqevvsdrVERRLQELEREMRTERelverrqDQLGLMslqlQEALKKQE 261
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELAE----------LNEAESDLEQDYQAAS-------DHLNLV----QTALRQQE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 262 akadehegaiknKLIQTETEKNQLEQELElsrkllnQSEGSRETLLHQVEELRAQLTIAEgdrkglqHQVSQISKQQSNY 341
Cdd:PRK04863 349 ------------KIERYQADLEELEERLE-------EQNEVVEEADEQQEENEARAEAAE-------EEVDELKSQLADY 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 342 QdeQGEDWRFRRGverekqdlekqmsdlrvqLNFNAMASELEEVKRCMERKDKEKAHLASQVEILTRELENGEKQQLQML 421
Cdd:PRK04863 403 Q--QALDVQQTRA------------------IQYQQAVQALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLE 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 422 DRL---KEIQNHFDTC---------EAERKHADLQISELTRHAEDATKQAEQ------YLSELQQSEALKEEAEKRREDL 483
Cdd:PRK04863 463 QKLsvaQAAHSQFEQAyqlvrkiagEVSRSEAWDVARELLRRLREQRHLAEQlqqlrmRLSELEQRLRQQQRAERLLAEF 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 484 KLKAQESIrqwkLKHKKLERALEKQSETVDELtgknNQILKEKDELKTQMYAALQQIENLRKElndvLTKRALQEEELHS 563
Cdd:PRK04863 543 CKRLGKNL----DDEDELEQLQEELEARLESL----SESVSEARERRMALRQQLEQLQARIQR----LAARAPAWLAAQD 610
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622956496 564 KEEKLRDikshQADLELEVKNSLD-TIHRLESELKKQSKIQSQMKVEKAHLEEEIAEL 620
Cdd:PRK04863 611 ALARLRE----QSGEEFEDSQDVTeYMQQLLERERELTVERDELAARKQALDEEIERL 664
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
512-727 |
7.74e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.14 E-value: 7.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 512 VDELTGKNNQILKEKDELKTQMYAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKnsldtihR 591
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-------K 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 592 LESELKKQSKIQsqmkvEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSAIRADLANKLAEEERAkkavlkdLSDLTA 671
Cdd:COG4717 121 LEKLLQLLPLYQ-----ELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEEL-------LEQLSL 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622956496 672 QAKSRDEETATVITQLKLERDVHQRELKDLTSSLQSVKTKHEQNIQELMKHFKKEK 727
Cdd:COG4717 189 ATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEER 244
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
414-682 |
8.14e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.81 E-value: 8.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 414 EKQQLQMLDRLKEIQNHFDTCEAERKHADLQISELTRHAEDATKQ---AEQYLSELQQS-EALKEEAEKRREDLKLKAQE 489
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAEleaLQAEIDKLQAEiAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 490 SIRQWKLKhKKLERALEKQS--------ETVDELTGKNNQILKEKDELKtqmyaalQQIENLRKELndvltkralqeeel 561
Cdd:COG3883 95 LYRSGGSV-SYLDVLLGSESfsdfldrlSALSKIADADADLLEELKADK-------AELEAKKAEL-------------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 562 hskEEKLRDIKSHQADLELEVKNsldtihrLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDL 641
Cdd:COG3883 153 ---EAKLAELEALKAELEAAKAE-------LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1622956496 642 SAIRADLANKLAEEERAKKAVLKDLSDLTAQAKSRDEETAT 682
Cdd:COG3883 223 AAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAG 263
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
457-658 |
8.92e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.30 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 457 KQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQWKLKHKKLERALEKQSETVDELTGKNNQILKEKDELKTQMYAA 536
Cdd:PRK05771 40 LSNERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKEL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 537 LQQIENLR--------------------------KELNDVLTKRALQEEELHSKEEKLRDI------KSHQADLE----- 579
Cdd:PRK05771 120 EQEIERLEpwgnfdldlslllgfkyvsvfvgtvpEDKLEELKLESDVENVEYISTDKGYVYvvvvvlKELSDEVEeelkk 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 580 --------LEVKNSLDTIHRLESELKKQSKiqsqmkvEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDlsaiRADLANK 651
Cdd:PRK05771 200 lgferlelEEEGTPSELIREIKEELEEIEK-------ERESLLEELKELAKKYLEELLALYEYLEIELE----RAEALSK 268
|
....*..
gi 1622956496 652 LAEEERA 658
Cdd:PRK05771 269 FLKTDKT 275
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
195-428 |
9.83e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.00 E-value: 9.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 195 AETKRTLEELTEKLNEAQKQEVVSDRVERRLQELEREMRTERELVERRQDQLGLMSL--QLQEALKKQEAKADEhegAIK 272
Cdd:COG3206 185 PELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARlaALRAQLGSGPDALPE---LLQ 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 273 NKLIQT-ETEKNQLEQEL-ELSRKLLNQSEgsretllhQVEELRAQLTIAegdRKGLQHQVSQISKQQSNYqdeqgedwr 350
Cdd:COG3206 262 SPVIQQlRAQLAELEAELaELSARYTPNHP--------DVIALRAQIAAL---RAQLQQEAQRILASLEAE--------- 321
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622956496 351 fRRGVEREKQDLEKQMSDLRVQLN-FNAMASELEEvkrcmerkdkekahlasqveiLTRELENGEKQQLQMLDRLKEIQ 428
Cdd:COG3206 322 -LEALQAREASLQAQLAQLEARLAeLPELEAELRR---------------------LEREVEVARELYESLLQRLEEAR 378
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
219-568 |
9.90e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.32 E-value: 9.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 219 DRVERRLQELEREMRTERELVERRQDQLGLMSLQLQEALKKQEAKADEHEGA------IKNKLIQTET-EKNQLEQElEL 291
Cdd:COG3096 281 RELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAAsdhlnlVQTALRQQEKiERYQEDLE-EL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 292 SRKLLNQSEgsretllhQVEELRAQLTIAEGDRKGLQHQVSQISKQQSNYQdeQGEDWRFRRGVEREK--QDLEK----- 364
Cdd:COG3096 360 TERLEEQEE--------VVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQ--QALDVQQTRAIQYQQavQALEKaralc 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 365 QMSDLRV------QLNFNAMASELEEVKRCMERK----DKEKAHLASQVEILTR-----ELENGEKQQLQMLDRLKEIQN 429
Cdd:COG3096 430 GLPDLTPenaedyLAAFRAKEQQATEEVLELEQKlsvaDAARRQFEKAYELVCKiagevERSQAWQTARELLRRYRSQQA 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622956496 430 HFDTCEA-ERKHADL-----QISELTRHAEDATKQAEQYLSELQQSEALKEEAEKRREDLKLKAQESIRQwklkHKKLER 503
Cdd:COG3096 510 LAQRLQQlRAQLAELeqrlrQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQ----RSELRQ 585
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622956496 504 ALEKQSETVDELTGKNNQILKEKD---ELKTQMYAAL---QQIENLRKELNDVLTKRALQEEELHSKEEKL 568
Cdd:COG3096 586 QLEQLRARIKELAARAPAWLAAQDaleRLREQSGEALadsQEVTAAMQQLLEREREATVERDELAARKQAL 656
|
|
| |
