NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|966917419|ref|XP_014994390|]
View 

testis-expressed protein 38 isoform X5 [Macaca mulatta]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
THEG4 super family cl24413
Testis highly expressed protein 4; THEG4, testis highly expressed protein 4, is a family of ...
 1-129 9.89e-63

Testis highly expressed protein 4; THEG4, testis highly expressed protein 4, is a family of proteins found in eukaryotes. Proteins in this family are typically between 152 and 232 amino acids in length.


The actual alignment was detected with superfamily member pfam15834:

Pssm-ID: 464902  Cd Length: 201  Bit Score: 190.10  E-value: 9.89e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966917419    1 MNAAINTGPPPAVTKTETEVQNPDVLWELDIPEGRSYADQVSNPKAEDPAPLQPALQGAPQQ--------PQASSPFPLP 72
Cdd:pfam15834  65 MNAAINTGPPPAVTKTETEVQNPDPLWELDIPEGRSYAVQDSSPKVEAPVPLQPALQVAPQQplpspmpqPQASSPLPIP 144

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 966917419   73 IFQEVPFAPPLCNLPPLLNHSVSYPSATCPERNVLFHSLPNLAHEDHSFNAKPFASE 129
Cdd:pfam15834 145 IFQEVPFAPSLCNLPPMLNHSVSYPLATCPERNVHFHSLPTLAHGDHCFNAKPFASE 201
 
Name Accession Description Interval E-value
THEG4 pfam15834
Testis highly expressed protein 4; THEG4, testis highly expressed protein 4, is a family of ...
 1-129 9.89e-63

Testis highly expressed protein 4; THEG4, testis highly expressed protein 4, is a family of proteins found in eukaryotes. Proteins in this family are typically between 152 and 232 amino acids in length.


Pssm-ID: 464902  Cd Length: 201  Bit Score: 190.10  E-value: 9.89e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966917419    1 MNAAINTGPPPAVTKTETEVQNPDVLWELDIPEGRSYADQVSNPKAEDPAPLQPALQGAPQQ--------PQASSPFPLP 72
Cdd:pfam15834  65 MNAAINTGPPPAVTKTETEVQNPDPLWELDIPEGRSYAVQDSSPKVEAPVPLQPALQVAPQQplpspmpqPQASSPLPIP 144

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 966917419   73 IFQEVPFAPPLCNLPPLLNHSVSYPSATCPERNVLFHSLPNLAHEDHSFNAKPFASE 129
Cdd:pfam15834 145 IFQEVPFAPSLCNLPPMLNHSVSYPLATCPERNVHFHSLPTLAHGDHCFNAKPFASE 201
 
Name Accession Description Interval E-value
THEG4 pfam15834
Testis highly expressed protein 4; THEG4, testis highly expressed protein 4, is a family of ...
 1-129 9.89e-63

Testis highly expressed protein 4; THEG4, testis highly expressed protein 4, is a family of proteins found in eukaryotes. Proteins in this family are typically between 152 and 232 amino acids in length.


Pssm-ID: 464902  Cd Length: 201  Bit Score: 190.10  E-value: 9.89e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966917419    1 MNAAINTGPPPAVTKTETEVQNPDVLWELDIPEGRSYADQVSNPKAEDPAPLQPALQGAPQQ--------PQASSPFPLP 72
Cdd:pfam15834  65 MNAAINTGPPPAVTKTETEVQNPDPLWELDIPEGRSYAVQDSSPKVEAPVPLQPALQVAPQQplpspmpqPQASSPLPIP 144

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 966917419   73 IFQEVPFAPPLCNLPPLLNHSVSYPSATCPERNVLFHSLPNLAHEDHSFNAKPFASE 129
Cdd:pfam15834 145 IFQEVPFAPSLCNLPPMLNHSVSYPLATCPERNVHFHSLPTLAHGDHCFNAKPFASE 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH