|
Name |
Accession |
Description |
Interval |
E-value |
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
15-527 |
0e+00 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila. :
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 552.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 15 YNDDRNLLRIREKERRNQEAHQEKEAFPEKIPLFGEPYKTAKGDELSSRIQNMLGNYEEVKEFLSTKSHTHRLDASENR- 93
Cdd:pfam05110 1 YNEDRNLLRIREWERRNQEVQQEKDLFPENFPLFGEPYKTNKGDELSSRIQNMLGNYEEMKELITNKSNQHLVGIPKNSv 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 94 ----LGKPKYPLIPDKGSSIPSSsFHTSVHHQSIHTPASGPLSVGnISHNPKMAQPRTEPMPSLHAKSYGPPDSQHLTQD 169
Cdd:pfam05110 81 pqtpQEKPDQPFFPDKTSGLPPS-FHTSSHSQPMGPPSSSSPSVS-SSQSQKKSQARTEPAHGGHSSSGSQSSQRSQGQS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 170 RL--GQEGYGSSHHKKGDRRADGDHCASvtDSAPERELSPLISSLPSPVPPLSPIHSNQQTLPRMQGSSKVHGsnnnsKG 247
Cdd:pfam05110 159 RSkgGQESHSSSHHKRQERREDLFSCAS--LSHSLEELSPLLSSLSSPVKPLSPSHSRQHTGSKAQNSSDHHG-----KE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 248 CCPAKSPKDLAVKVHDKETPQDSLVAPP-QPPSQTFPPPsLPSKSVAMQQKPTAYVRPMDGQDQAPSESPELKPLPEDYR 326
Cdd:pfam05110 232 YSHSKSPRDSEAGSHGPESPSTSLLASSsQLSSQTFPPS-LPSKTSAMQQKPTAYVRPMDGQDQAPSESPELKPSPEDYH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 327 QQTFEK-TDLKVPAKAKLTKLKMPSQSVE-TYSNEVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHISS 404
Cdd:pfam05110 311 GQSYGKlSDLKANAKAKLSKLKIPSQPLEqSLSNDVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKESQHVTS 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 405 VTQNQKQYDTSSKTHPNSQQGTsSMLEDDLQLSDSEDSDGEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDS 484
Cdd:pfam05110 391 GYQNQKQYDAPSKTLPTSQQGT-SMLEDDLKLSSSEDSDDDQAPEKPPPSSAPPSAPQSQPNSVASAHSSSGESGSSSDS 469
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 966943992 485 DSSSD--SESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLT 527
Cdd:pfam05110 470 ESSSEsdSESESSSSDSEANEPPRSATPEPEPPSSNKWQLDNWLN 514
|
|
| AF-4_C |
pfam18876 |
AF-4 proto-oncoprotein C-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
959-1220 |
1.72e-136 |
|
AF-4 proto-oncoprotein C-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila. :
Pssm-ID: 465894 Cd Length: 262 Bit Score: 415.61 E-value: 1.72e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 959 SKPGKPQVKFDKQQ--ADLHMREAKKLKQKAELMTDKVGKAFKYLEAVLSLIECGIATESESPASKSAYSVYSETVDLIK 1036
Cdd:pfam18876 1 SKPRRPQLKFEDRQhsADYYMQEAKKLKHKADALSDKFGKAFKYLDAALSFIECGIAMESDPQEAKSPYTMYSETVELIK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 1037 FIMSLKSFSDATAPTQEKIFAVLCMRCQSILNMAMFRCKKDIAIKYSRTLNKHFESSSKVAQAPSPCIARSTGTPSPLSP 1116
Cdd:pfam18876 81 YVMKLKNFTDPSATTAEKIFAVLCLRCQSLLYMAMFRLKKDTAIKYSRTLNEHFKNSSKVAQAPSPCVAKSTGTPSPLSP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 1117 MPSPASSVgsQSSAGSVGSSGVAATISTPVTIQNMTSSYVTITSHVLTAFDLWEQAEALTRKNKEFFARLSTNVCTLALN 1196
Cdd:pfam18876 161 MPSPASSV--SSQSGSSGSSGSSSSVSIPQRIHQMASSYVNITSNFLYAYEIWEQAEALARENKEFFAELDTVMGPLALN 238
|
250 260
....*....|....*....|....
gi 966943992 1197 SSLVDLVHYTRQGFQQLLELTKTP 1220
Cdd:pfam18876 239 SSMTELVRYTRQGLHWLRLDAKLP 262
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
530-718 |
4.68e-06 |
|
DNA polymerase III subunit gamma/tau; The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 530 SQPAAPPE---GPGSTEPPPQRPESKGSSDGATSQERSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQT 606
Cdd:PRK07003 468 AQPPADSGsasAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAG 547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 607 vgtkqpkkpvkasaraDSRASLQVEREAGLLPYG--SRDQTSKDKPKVKTKGRPRTAASKE----PKPAVPPSSEKKKHK 680
Cdd:PRK07003 548 ----------------GAAAALDVLRNAGMRVSSdrGARAAAAAKPAAAPAAAPKPAAPRVavqvPTPRARAATGDAPPN 611
|
170 180 190
....*....|....*....|....*....|....*....
gi 966943992 681 SSLPAPSKAPS-GPEPTKDnvgDRSPEHFalVPLTQSQG 718
Cdd:PRK07003 612 GAARAEQAAESrGAPPPWE---DIPPDDY--VPLSADEG 645
|
|
| AF4_int |
pfam18875 |
AF4 interaction motif; This short motif found in the AF4 protein interacts with AF9. |
768-782 |
1.38e-03 |
|
AF4 interaction motif; This short motif found in the AF4 protein interacts with AF9. :
Pssm-ID: 436798 Cd Length: 15 Bit Score: 37.02 E-value: 1.38e-03
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
15-527 |
0e+00 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 552.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 15 YNDDRNLLRIREKERRNQEAHQEKEAFPEKIPLFGEPYKTAKGDELSSRIQNMLGNYEEVKEFLSTKSHTHRLDASENR- 93
Cdd:pfam05110 1 YNEDRNLLRIREWERRNQEVQQEKDLFPENFPLFGEPYKTNKGDELSSRIQNMLGNYEEMKELITNKSNQHLVGIPKNSv 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 94 ----LGKPKYPLIPDKGSSIPSSsFHTSVHHQSIHTPASGPLSVGnISHNPKMAQPRTEPMPSLHAKSYGPPDSQHLTQD 169
Cdd:pfam05110 81 pqtpQEKPDQPFFPDKTSGLPPS-FHTSSHSQPMGPPSSSSPSVS-SSQSQKKSQARTEPAHGGHSSSGSQSSQRSQGQS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 170 RL--GQEGYGSSHHKKGDRRADGDHCASvtDSAPERELSPLISSLPSPVPPLSPIHSNQQTLPRMQGSSKVHGsnnnsKG 247
Cdd:pfam05110 159 RSkgGQESHSSSHHKRQERREDLFSCAS--LSHSLEELSPLLSSLSSPVKPLSPSHSRQHTGSKAQNSSDHHG-----KE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 248 CCPAKSPKDLAVKVHDKETPQDSLVAPP-QPPSQTFPPPsLPSKSVAMQQKPTAYVRPMDGQDQAPSESPELKPLPEDYR 326
Cdd:pfam05110 232 YSHSKSPRDSEAGSHGPESPSTSLLASSsQLSSQTFPPS-LPSKTSAMQQKPTAYVRPMDGQDQAPSESPELKPSPEDYH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 327 QQTFEK-TDLKVPAKAKLTKLKMPSQSVE-TYSNEVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHISS 404
Cdd:pfam05110 311 GQSYGKlSDLKANAKAKLSKLKIPSQPLEqSLSNDVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKESQHVTS 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 405 VTQNQKQYDTSSKTHPNSQQGTsSMLEDDLQLSDSEDSDGEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDS 484
Cdd:pfam05110 391 GYQNQKQYDAPSKTLPTSQQGT-SMLEDDLKLSSSEDSDDDQAPEKPPPSSAPPSAPQSQPNSVASAHSSSGESGSSSDS 469
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 966943992 485 DSSSD--SESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLT 527
Cdd:pfam05110 470 ESSSEsdSESESSSSDSEANEPPRSATPEPEPPSSNKWQLDNWLN 514
|
|
| AF-4_C |
pfam18876 |
AF-4 proto-oncoprotein C-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
959-1220 |
1.72e-136 |
|
AF-4 proto-oncoprotein C-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 465894 Cd Length: 262 Bit Score: 415.61 E-value: 1.72e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 959 SKPGKPQVKFDKQQ--ADLHMREAKKLKQKAELMTDKVGKAFKYLEAVLSLIECGIATESESPASKSAYSVYSETVDLIK 1036
Cdd:pfam18876 1 SKPRRPQLKFEDRQhsADYYMQEAKKLKHKADALSDKFGKAFKYLDAALSFIECGIAMESDPQEAKSPYTMYSETVELIK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 1037 FIMSLKSFSDATAPTQEKIFAVLCMRCQSILNMAMFRCKKDIAIKYSRTLNKHFESSSKVAQAPSPCIARSTGTPSPLSP 1116
Cdd:pfam18876 81 YVMKLKNFTDPSATTAEKIFAVLCLRCQSLLYMAMFRLKKDTAIKYSRTLNEHFKNSSKVAQAPSPCVAKSTGTPSPLSP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 1117 MPSPASSVgsQSSAGSVGSSGVAATISTPVTIQNMTSSYVTITSHVLTAFDLWEQAEALTRKNKEFFARLSTNVCTLALN 1196
Cdd:pfam18876 161 MPSPASSV--SSQSGSSGSSGSSSSVSIPQRIHQMASSYVNITSNFLYAYEIWEQAEALARENKEFFAELDTVMGPLALN 238
|
250 260
....*....|....*....|....
gi 966943992 1197 SSLVDLVHYTRQGFQQLLELTKTP 1220
Cdd:pfam18876 239 SSMTELVRYTRQGLHWLRLDAKLP 262
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
530-718 |
4.68e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 530 SQPAAPPE---GPGSTEPPPQRPESKGSSDGATSQERSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQT 606
Cdd:PRK07003 468 AQPPADSGsasAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAG 547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 607 vgtkqpkkpvkasaraDSRASLQVEREAGLLPYG--SRDQTSKDKPKVKTKGRPRTAASKE----PKPAVPPSSEKKKHK 680
Cdd:PRK07003 548 ----------------GAAAALDVLRNAGMRVSSdrGARAAAAAKPAAAPAAAPKPAAPRVavqvPTPRARAATGDAPPN 611
|
170 180 190
....*....|....*....|....*....|....*....
gi 966943992 681 SSLPAPSKAPS-GPEPTKDnvgDRSPEHFalVPLTQSQG 718
Cdd:PRK07003 612 GAARAEQAAESrGAPPPWE---DIPPDDY--VPLSADEG 645
|
|
| AF4_int |
pfam18875 |
AF4 interaction motif; This short motif found in the AF4 protein interacts with AF9. |
768-782 |
1.38e-03 |
|
AF4 interaction motif; This short motif found in the AF4 protein interacts with AF9.
Pssm-ID: 436798 Cd Length: 15 Bit Score: 37.02 E-value: 1.38e-03
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
532-908 |
7.53e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 532 PAAPPEGPGSTEPPPqRPESKGSSDGATSQERSES--------------KDPPPKSSSKAPrAPPEAPHPGKRSCQKSPA 597
Cdd:PHA03247 2557 PAAPPAAPDRSVPPP-RPAPRPSEPAVTSRARRPDappqsarprapvddRGDPRGPAPPSP-LPPDTHAPDPPPPSPSPA 2634
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 598 QQEPPQRQTVGTKQPKKPVKASARADSRASLQVEREaGLLPYGSRDQTSKDKPKVKTKGRPRTAASKEPKPAVPPSSEKK 677
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRL-GRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPH 2713
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 678 KHKSSLPAPSKAPSGPEPTKDNVGDRSPEHFALVPLTQsqgplhsgGGSRTSGCRQAVVVQEDSRKDRLPLPlrdtklls 757
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP--------GGPARPARPPTTAGPPAPAPPAAPAA-------- 2777
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 758 plrdTPPPqslmvkitldllsRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSSKLAKKRKGeaerdcdnkkirLE 837
Cdd:PHA03247 2778 ----GPPR-------------RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAG------------PL 2828
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966943992 838 KEIKSQSSSSSSSSSHKESSKAKPCrpSSESSKKEMLPPPPVSSSSQKPAKPAHKRSKREADTCGQDPPKS 908
Cdd:PHA03247 2829 PPPTSAQPTAPPPPPGPPPPSLPLG--GSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTES 2897
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
15-527 |
0e+00 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 552.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 15 YNDDRNLLRIREKERRNQEAHQEKEAFPEKIPLFGEPYKTAKGDELSSRIQNMLGNYEEVKEFLSTKSHTHRLDASENR- 93
Cdd:pfam05110 1 YNEDRNLLRIREWERRNQEVQQEKDLFPENFPLFGEPYKTNKGDELSSRIQNMLGNYEEMKELITNKSNQHLVGIPKNSv 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 94 ----LGKPKYPLIPDKGSSIPSSsFHTSVHHQSIHTPASGPLSVGnISHNPKMAQPRTEPMPSLHAKSYGPPDSQHLTQD 169
Cdd:pfam05110 81 pqtpQEKPDQPFFPDKTSGLPPS-FHTSSHSQPMGPPSSSSPSVS-SSQSQKKSQARTEPAHGGHSSSGSQSSQRSQGQS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 170 RL--GQEGYGSSHHKKGDRRADGDHCASvtDSAPERELSPLISSLPSPVPPLSPIHSNQQTLPRMQGSSKVHGsnnnsKG 247
Cdd:pfam05110 159 RSkgGQESHSSSHHKRQERREDLFSCAS--LSHSLEELSPLLSSLSSPVKPLSPSHSRQHTGSKAQNSSDHHG-----KE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 248 CCPAKSPKDLAVKVHDKETPQDSLVAPP-QPPSQTFPPPsLPSKSVAMQQKPTAYVRPMDGQDQAPSESPELKPLPEDYR 326
Cdd:pfam05110 232 YSHSKSPRDSEAGSHGPESPSTSLLASSsQLSSQTFPPS-LPSKTSAMQQKPTAYVRPMDGQDQAPSESPELKPSPEDYH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 327 QQTFEK-TDLKVPAKAKLTKLKMPSQSVE-TYSNEVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHISS 404
Cdd:pfam05110 311 GQSYGKlSDLKANAKAKLSKLKIPSQPLEqSLSNDVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKESQHVTS 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 405 VTQNQKQYDTSSKTHPNSQQGTsSMLEDDLQLSDSEDSDGEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDS 484
Cdd:pfam05110 391 GYQNQKQYDAPSKTLPTSQQGT-SMLEDDLKLSSSEDSDDDQAPEKPPPSSAPPSAPQSQPNSVASAHSSSGESGSSSDS 469
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 966943992 485 DSSSD--SESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLT 527
Cdd:pfam05110 470 ESSSEsdSESESSSSDSEANEPPRSATPEPEPPSSNKWQLDNWLN 514
|
|
| AF-4_C |
pfam18876 |
AF-4 proto-oncoprotein C-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
959-1220 |
1.72e-136 |
|
AF-4 proto-oncoprotein C-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 465894 Cd Length: 262 Bit Score: 415.61 E-value: 1.72e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 959 SKPGKPQVKFDKQQ--ADLHMREAKKLKQKAELMTDKVGKAFKYLEAVLSLIECGIATESESPASKSAYSVYSETVDLIK 1036
Cdd:pfam18876 1 SKPRRPQLKFEDRQhsADYYMQEAKKLKHKADALSDKFGKAFKYLDAALSFIECGIAMESDPQEAKSPYTMYSETVELIK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 1037 FIMSLKSFSDATAPTQEKIFAVLCMRCQSILNMAMFRCKKDIAIKYSRTLNKHFESSSKVAQAPSPCIARSTGTPSPLSP 1116
Cdd:pfam18876 81 YVMKLKNFTDPSATTAEKIFAVLCLRCQSLLYMAMFRLKKDTAIKYSRTLNEHFKNSSKVAQAPSPCVAKSTGTPSPLSP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 1117 MPSPASSVgsQSSAGSVGSSGVAATISTPVTIQNMTSSYVTITSHVLTAFDLWEQAEALTRKNKEFFARLSTNVCTLALN 1196
Cdd:pfam18876 161 MPSPASSV--SSQSGSSGSSGSSSSVSIPQRIHQMASSYVNITSNFLYAYEIWEQAEALARENKEFFAELDTVMGPLALN 238
|
250 260
....*....|....*....|....
gi 966943992 1197 SSLVDLVHYTRQGFQQLLELTKTP 1220
Cdd:pfam18876 239 SSMTELVRYTRQGLHWLRLDAKLP 262
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
530-718 |
4.68e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.00 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 530 SQPAAPPE---GPGSTEPPPQRPESKGSSDGATSQERSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQT 606
Cdd:PRK07003 468 AQPPADSGsasAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAG 547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 607 vgtkqpkkpvkasaraDSRASLQVEREAGLLPYG--SRDQTSKDKPKVKTKGRPRTAASKE----PKPAVPPSSEKKKHK 680
Cdd:PRK07003 548 ----------------GAAAALDVLRNAGMRVSSdrGARAAAAAKPAAAPAAAPKPAAPRVavqvPTPRARAATGDAPPN 611
|
170 180 190
....*....|....*....|....*....|....*....
gi 966943992 681 SSLPAPSKAPS-GPEPTKDnvgDRSPEHFalVPLTQSQG 718
Cdd:PRK07003 612 GAARAEQAAESrGAPPPWE---DIPPDDY--VPLSADEG 645
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
530-712 |
6.60e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 6.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 530 SQPAAPPEGPGSTEPPPQRPESKgssdgatsqerseskDPPPKSSSKAPRAPPEAPHPGKRSCQKS-----PAQQEPPQR 604
Cdd:PHA03247 2805 ADPPAAVLAPAAALPPAASPAGP---------------LPPPTSAQPTAPPPPPGPPPPSLPLGGSvapggDVRRRPPSR 2869
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 605 QTVGTkqPKKPVKASARADSRASLQVEREAGLLPygsrdqtsKDKPKvktkgRPRTAASKEPKPAVPPSSEKKKHKSSLP 684
Cdd:PHA03247 2870 SPAAK--PAAPARPPVRRLARPAVSRSTESFALP--------PDQPE-----RPPQPQAPPPPQPQPQPPPPPQPQPPPP 2934
|
170 180
....*....|....*....|....*...
gi 966943992 685 APSKAPSGPEPTKDNVGDRSPEHFALVP 712
Cdd:PHA03247 2935 PPPRPQPPLAPTTDPAGAGEPSGAVPQP 2962
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
532-635 |
3.07e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 3.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 532 PAAPPEGPGSTEPPPQRPESKGSSDGATSQERSeskdPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQTVGTK- 610
Cdd:PRK14951 389 PAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAA----PPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPv 464
|
90 100
....*....|....*....|....*..
gi 966943992 611 --QPKKPVKASARADSRASLQVEREAG 635
Cdd:PRK14951 465 rvAPEPAVASAAPAPAAAPAAARLTPT 491
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
534-695 |
2.83e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 534 APPEGPGSTEPPPQRPESKGSSDGATSQERSESKDPPPKSSSKAPRAPPEAPHPGKRScQKSPAQQEPPQRQTVGTKQPK 613
Cdd:PRK07003 366 GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRA-EAPPAAPAPPATADRGDDAAD 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 614 KPVKASARADSRASLqverEAGLLPYGSRDQTSKdKPKVKTKGRPRTAASKEPKP-AVPPSSEKKKHKSSLPAPSKAPSG 692
Cdd:PRK07003 445 GDAPVPAKANARASA----DSRCDERDAQPPADS-GSASAPASDAPPDAAFEPAPrAAAPSAATPAAVPDARAPAAASRE 519
|
...
gi 966943992 693 PEP 695
Cdd:PRK07003 520 DAP 522
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
520-765 |
7.33e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 7.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 520 WQLDNWLTKVSQPAAPPEGPGST-------------EPPPQRPESKGSSDGATSQERSESKDPPPKSSSKA--------- 577
Cdd:PHA03307 170 RQAALPLSSPEETARAPSSPPAEpppstppaaasprPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSssessgcgw 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 578 ----------------PRAPPEAPHPGKRSCQKSPAQQEPPQRQTVGTKQPKKPVKASARADSRASLQVEREAGLLPYGS 641
Cdd:PHA03307 250 gpenecplprpapitlPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSST 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 642 RDQTSKDKPKVKTKGRP--RTAASKEPKPAVPPSSEKKKHKSSLPAPSKAPSGPEPTKDNVGdrspehfalvPLTQSQGP 719
Cdd:PHA03307 330 SSSSESSRGAAVSPGPSpsRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR----------AAVAGRAR 399
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 966943992 720 LHSGGGSRTSGCRQAVVVQEDSRKDRLPLPLRD-TKLLSPLRDTPPP 765
Cdd:PHA03307 400 RRDATGRFPAGRPRPSPLDAGAASGAFYARYPLlTPSGEPWPGSPPP 446
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
530-698 |
9.29e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 9.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 530 SQPAAPPEGPGSTEPPPQRPESKGSSDGATSQERSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQTVGT 609
Cdd:PRK07764 634 AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ 713
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 610 KQPKKPVKASARADSRASLQVEREAGLLPYGSRDQTSKDKPKVktKGRPRTAASKEPKPAVPPSSEKKKHKSSLPAPSKA 689
Cdd:PRK07764 714 ADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPA--QPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791
|
....*....
gi 966943992 690 PSGPEPTKD 698
Cdd:PRK07764 792 SMDDEDRRD 800
|
|
| AF4_int |
pfam18875 |
AF4 interaction motif; This short motif found in the AF4 protein interacts with AF9. |
768-782 |
1.38e-03 |
|
AF4 interaction motif; This short motif found in the AF4 protein interacts with AF9.
Pssm-ID: 436798 Cd Length: 15 Bit Score: 37.02 E-value: 1.38e-03
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
569-716 |
1.53e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 569 PPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQTVGTKQPKKPVKASARADSRASLQVEREAGLLPYGSRDQTSKD 648
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966943992 649 KPKVKTKGRPRTAASKEPKPAVPPSSEKKKHKSSLPAPskAPSGPEPTKDnvgdrSPEHFALVPLTQS 716
Cdd:PRK12323 454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAP--ADDDPPPWEE-----LPPEFASPAPAQP 514
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
532-705 |
2.74e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 532 PAAPPEGPGSTEPP-PQRPESKGSSD----GATSQERSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQT 606
Cdd:PHA03247 269 PETARGATGPPPPPeAAAPNGAAAPPdgvwGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPRQHYP 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 607 VGTKQPKKPV--KASARADSRASLQVEREAGLLPYGSRDQTSKDKPKVKTKGRPRTAASKEPKPAVPPSSEKKKHKSSLP 684
Cdd:PHA03247 349 LGFPKRRRPTwtPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAP 428
|
170 180
....*....|....*....|.
gi 966943992 685 APskaPSGPEPTKDNVGDRSP 705
Cdd:PHA03247 429 PP---PATPLPSAEPGSDDGP 446
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
529-714 |
3.82e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 529 VSQPAAPPEGPGSTEPPPQrPESKGSSDGATSQERSESKDPPPK-SSSKAPRAPPEAPHPGKRscqksPAQQEPPQRqtv 607
Cdd:PRK12323 411 AAAAAARAVAAAPARRSPA-PEALAAARQASARGPGGAPAPAPApAAAPAAAARPAAAGPRPV-----AAAAAAAPA--- 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 608 gtkqPKKPVKASARADSrASLQVEREAGLLPYGSRDQTSKDKPKVKTKGRPRTAASKEPKP----AVPPSSEKKKHKSSL 683
Cdd:PRK12323 482 ----RAAPAAAPAPADD-DPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAfetlAPAPAAAPAPRAAAA 556
|
170 180 190
....*....|....*....|....*....|....*
gi 966943992 684 PAPSKAPSGPEPTKDNVGDRS----PEHFALVPLT 714
Cdd:PRK12323 557 TEPVVAPRPPRASASGLPDMFdgdwPALAARLPVR 591
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
529-623 |
4.00e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 4.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 529 VSQPAAPPEGPGSTEPPPQRPESKGSSDGATSQERSESKDPPPKSSSKAPRA---PPEAPHPGKRSCQKSPAQQEPPQRQ 605
Cdd:PRK14971 383 FTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAvpvNPPSTAPQAVRPAQFKEEKKIPVSK 462
|
90 100
....*....|....*....|..
gi 966943992 606 T----VGTKQPKKPVKASARAD 623
Cdd:PRK14971 463 VsslgPSTLRPIQEKAEQATGN 484
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
529-672 |
5.61e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.99 E-value: 5.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 529 VSQPAAPPEGPGSTEPPPQRPESKGSSDGATsqeRSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPqrqtVG 608
Cdd:PRK07003 410 LAPKAAAAAAATRAEAPPAAPAPPATADRGD---DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAP----AS 482
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966943992 609 TKQPKKPVKASARAD--SRASLQVEREAGLLPYGSRDqtskDKPkvktkgrprtAASKEPKPAVPP 672
Cdd:PRK07003 483 DAPPDAAFEPAPRAAapSAATPAAVPDARAPAAASRE----DAP----------AAAAPPAPEARP 534
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
532-908 |
7.53e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 532 PAAPPEGPGSTEPPPqRPESKGSSDGATSQERSES--------------KDPPPKSSSKAPrAPPEAPHPGKRSCQKSPA 597
Cdd:PHA03247 2557 PAAPPAAPDRSVPPP-RPAPRPSEPAVTSRARRPDappqsarprapvddRGDPRGPAPPSP-LPPDTHAPDPPPPSPSPA 2634
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 598 QQEPPQRQTVGTKQPKKPVKASARADSRASLQVEREaGLLPYGSRDQTSKDKPKVKTKGRPRTAASKEPKPAVPPSSEKK 677
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRL-GRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPH 2713
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 678 KHKSSLPAPSKAPSGPEPTKDNVGDRSPEHFALVPLTQsqgplhsgGGSRTSGCRQAVVVQEDSRKDRLPLPlrdtklls 757
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP--------GGPARPARPPTTAGPPAPAPPAAPAA-------- 2777
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966943992 758 plrdTPPPqslmvkitldllsRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSSKLAKKRKGeaerdcdnkkirLE 837
Cdd:PHA03247 2778 ----GPPR-------------RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAG------------PL 2828
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966943992 838 KEIKSQSSSSSSSSSHKESSKAKPCrpSSESSKKEMLPPPPVSSSSQKPAKPAHKRSKREADTCGQDPPKS 908
Cdd:PHA03247 2829 PPPTSAQPTAPPPPPGPPPPSLPLG--GSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTES 2897
|
|
|