|
Name |
Accession |
Description |
Interval |
E-value |
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
50-231 |
3.04e-58 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
:
Pssm-ID: 214560 Cd Length: 184 Bit Score: 199.12 E-value: 3.04e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 50 GFNLIRRLSLMKMS-AIKKIRNPKGP-LILRLG-AASVTQPTRRVFPRGLPEEFALVLTLLLKKhthQKTWYLFQVTDAD 126
Cdd:smart00210 1 GQDLLQVFDLPSLSfAIRQVVGPEPGsPAYRLGdPALVPQPTRDLFPSGLPEDFSLLTTFRQTP---KSRGVLFAIYDAQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 127 GYPQISLEVNNQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRR--PLRPVG 204
Cdd:smart00210 78 NVRQFGLEVDGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGqpPIDTDG 157
|
170 180
....*....|....*....|....*..
gi 1622833664 205 HVFLGLDAEQGKPVSFDLQQVHIYCDP 231
Cdd:smart00210 158 IEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
685-886 |
3.31e-25 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 110.77 E-value: 3.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 685 GKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGPKGEKGDGCTACPSLQGTVTDVAGRPGQPGPKGEPGP 764
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 765 EG-VGRPGKPGQPGLPGVQGPPGLKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRgppGPTGEKGAQGSPGVKGA 843
Cdd:NF038329 197 RGeTGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPA---GKDGPRGDRGEAGPDGP 273
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1622833664 844 TGPVGPpgtsvSGPPGRDGQQGQTGPRGTPGEKGPRGEKGEPG 886
Cdd:NF038329 274 DGKDGE-----RGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDG 311
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
337-617 |
4.38e-15 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 79.56 E-value: 4.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 337 GGKGERGLPGPPGSKGEKGARGNDcvrispdaplqcaeGPKGEKGQSGALGPSGLPGSTGEKGQKGEKGDGGLKGVPGKP 416
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDR--------------GETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGppglpgppgiglpgtpgdpggppgpkgdkgssgiPGKEGPGGKPGK 496
Cdd:NF038329 183 GAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDG----------------------------------EAGPAGEDGPAG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 497 PGVKGEKGDPCEVCPTLPEGFQSFVGLPGKPGPKGEPGDPVSArdhpKTVGQKGDRGDPGIQGIKGEKGEsclscssvvg 576
Cdd:NF038329 229 PAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPD----GPDGKDGERGPVGPAGKDGQNGK---------- 294
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1622833664 577 aQHLASSTGASGDVGSPgfGLPGLPGKAGLPGLKGEKGNFG 617
Cdd:NF038329 295 -DGLPGKDGKDGQNGKD--GLPGKDGKDGQPGKDGLPGKDG 332
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1170-1413 |
7.48e-14 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 75.71 E-value: 7.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1170 GAPGPPGPQAEKGSEGIRGPSGMPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGL 1249
Cdd:NF038329 120 GEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1250 PGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGppghvgppgppgqpgpagisaVGLKGDRGATGERGLAGLPGQPGP 1329
Cdd:NF038329 200 TGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQ---------------------QGPDGDPGPTGEDGPQGPDGPAGK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1330 PGHPGPPGEPGTDGAAGKEGPAGKQGLYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPG 1409
Cdd:NF038329 259 DGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
....
gi 1622833664 1410 APGP 1413
Cdd:NF038329 339 KPAP 342
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1062-1275 |
5.38e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 73.02 E-value: 5.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1062 GLQGERGLTGLTGDKGEPGPPGQPGYPGAMGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGN 1141
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1142 SGEKGDQGFQGQPGFPGPPGPPGFPGKVGAPGPP-----GPQAEKGSEGIRGPSGMPGSPGPPGPPGIQGPAGLDGLDGK 1216
Cdd:NF038329 197 RGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAgdgqqGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGK 276
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622833664 1217 DGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1275
Cdd:NF038329 277 DGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDG 335
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
787-1120 |
4.21e-08 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 57.61 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 787 LKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGTSvsGPPGRDGQQGQ 866
Cdd:NF038329 107 DEGLQQLKGDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQ--GPAGKDGEAGA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 867 TGPRGTPGEKGPRGEKGEPGEcscpsrgdlvfsgmpgppgipgppgppgvPGLQGVPGNNGLPGQPGLTAELGSlpieqh 946
Cdd:NF038329 185 KGPAGEKGPQGPRGETGPAGE-----------------------------QGPAGPAGPDGEAGPAGEDGPAGP------ 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 947 llksiCGDCVQGQRAHPAYLVEKGEKGDQGIPGVLGldncaqcflslerpraeeARGDNNEGDPgcigspglpgpPGLPG 1026
Cdd:NF038329 230 -----AGDGQQGPDGDPGPTGEDGPQGPDGPAGKDG------------------PRGDRGEAGP-----------DGPDG 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1027 QRGEEgppgmrgspgppgpigppgfpgavGSPGLPGLQGERGLTGLTGDKGEPgppgqpgypgamGPPGLPGIKGERGYT 1106
Cdd:NF038329 276 KDGER------------------------GPVGPAGKDGQNGKDGLPGKDGKD------------GQNGKDGLPGKDGKD 319
|
330
....*....|....
gi 1622833664 1107 GSAGEKGEPGPPGS 1120
Cdd:NF038329 320 GQPGKDGLPGKDGK 333
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1371-1549 |
1.23e-05 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 49.52 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1371 QKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfder 1450
Cdd:NF038329 112 QLKGDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGE---------------------- 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1451 mayytsrmqfpmemaaaPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG-VGIAGENGL 1529
Cdd:NF038329 170 -----------------AGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGeDGPAGPAGD 232
|
170 180
....*....|....*....|
gi 1622833664 1530 PGPPGPQGPPGYGKMGATGP 1549
Cdd:NF038329 233 GQQGPDGDPGPTGEDGPQGP 252
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
50-231 |
3.04e-58 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
Pssm-ID: 214560 Cd Length: 184 Bit Score: 199.12 E-value: 3.04e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 50 GFNLIRRLSLMKMS-AIKKIRNPKGP-LILRLG-AASVTQPTRRVFPRGLPEEFALVLTLLLKKhthQKTWYLFQVTDAD 126
Cdd:smart00210 1 GQDLLQVFDLPSLSfAIRQVVGPEPGsPAYRLGdPALVPQPTRDLFPSGLPEDFSLLTTFRQTP---KSRGVLFAIYDAQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 127 GYPQISLEVNNQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRR--PLRPVG 204
Cdd:smart00210 78 NVRQFGLEVDGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGqpPIDTDG 157
|
170 180
....*....|....*....|....*..
gi 1622833664 205 HVFLGLDAEQGKPVSFDLQQVHIYCDP 231
Cdd:smart00210 158 IEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
685-886 |
3.31e-25 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 110.77 E-value: 3.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 685 GKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGPKGEKGDGCTACPSLQGTVTDVAGRPGQPGPKGEPGP 764
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 765 EG-VGRPGKPGQPGLPGVQGPPGLKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRgppGPTGEKGAQGSPGVKGA 843
Cdd:NF038329 197 RGeTGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPA---GKDGPRGDRGEAGPDGP 273
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1622833664 844 TGPVGPpgtsvSGPPGRDGQQGQTGPRGTPGEKGPRGEKGEPG 886
Cdd:NF038329 274 DGKDGE-----RGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDG 311
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
550-814 |
1.18e-17 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 87.65 E-value: 1.18e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 550 GDRGDPGIQGIKGEKGESclscssvvgaqhlasstGASGDVGSPGfgLPGLPGKAGLPGLKGEKGNFGEAGPAGSPGPPG 629
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQ-----------------GPRGDRGETG--PAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAG 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 630 PVGPVGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPG 709
Cdd:NF038329 178 KDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAG 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 710 TTGRPGLSGEPGVRGPAGPKGEKGDgctacpslqgtvTDVAGRPGQPGPKGEPGPEgvGRPGKPGQPGLPGVQGPPGLKG 789
Cdd:NF038329 258 KDGPRGDRGEAGPDGPDGKDGERGP------------VGPAGKDGQNGKDGLPGKD--GKDGQNGKDGLPGKDGKDGQPG 323
|
250 260
....*....|....*....|....*
gi 1622833664 790 MQGEPGPPGRGVQGPQGEPGAPGLP 814
Cdd:NF038329 324 KDGLPGKDGKDGQPGKPAPKTPEVP 348
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
337-617 |
4.38e-15 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 79.56 E-value: 4.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 337 GGKGERGLPGPPGSKGEKGARGNDcvrispdaplqcaeGPKGEKGQSGALGPSGLPGSTGEKGQKGEKGDGGLKGVPGKP 416
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDR--------------GETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGppglpgppgiglpgtpgdpggppgpkgdkgssgiPGKEGPGGKPGK 496
Cdd:NF038329 183 GAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDG----------------------------------EAGPAGEDGPAG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 497 PGVKGEKGDPCEVCPTLPEGFQSFVGLPGKPGPKGEPGDPVSArdhpKTVGQKGDRGDPGIQGIKGEKGEsclscssvvg 576
Cdd:NF038329 229 PAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPD----GPDGKDGERGPVGPAGKDGQNGK---------- 294
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1622833664 577 aQHLASSTGASGDVGSPgfGLPGLPGKAGLPGLKGEKGNFG 617
Cdd:NF038329 295 -DGLPGKDGKDGQNGKD--GLPGKDGKDGQPGKDGLPGKDG 332
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1170-1413 |
7.48e-14 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 75.71 E-value: 7.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1170 GAPGPPGPQAEKGSEGIRGPSGMPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGL 1249
Cdd:NF038329 120 GEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1250 PGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGppghvgppgppgqpgpagisaVGLKGDRGATGERGLAGLPGQPGP 1329
Cdd:NF038329 200 TGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQ---------------------QGPDGDPGPTGEDGPQGPDGPAGK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1330 PGHPGPPGEPGTDGAAGKEGPAGKQGLYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPG 1409
Cdd:NF038329 259 DGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
....
gi 1622833664 1410 APGP 1413
Cdd:NF038329 339 KPAP 342
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1062-1275 |
5.38e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 73.02 E-value: 5.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1062 GLQGERGLTGLTGDKGEPGPPGQPGYPGAMGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGN 1141
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1142 SGEKGDQGFQGQPGFPGPPGPPGFPGKVGAPGPP-----GPQAEKGSEGIRGPSGMPGSPGPPGPPGIQGPAGLDGLDGK 1216
Cdd:NF038329 197 RGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAgdgqqGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGK 276
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622833664 1217 DGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1275
Cdd:NF038329 277 DGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDG 335
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1245-1520 |
8.62e-12 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 69.16 E-value: 8.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1245 GHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPghvgppgppgqpgpagisavGLKGDRGATGERGLAGLP 1324
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGER--------------------GEKGPAGPQGEAGPQGPA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1325 GQPGPPGHPGPPGEPGTDGAAGKEGPAGKQGLYGPPGPKGDPGAAGQKGQAGEKGRagmpGGPGKSGSMGPVGPPGPAGE 1404
Cdd:NF038329 177 GKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGD----GQQGPDGDPGPTGEDGPQGP 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1405 RGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfdermayytsrmqfpmemAAAPGRPGPPGKDGAPGRPG 1484
Cdd:NF038329 253 DGPAGKDGPRGDRGEAGPDGPDGK------------------------------------DGERGPVGPAGKDGQNGKDG 296
|
250 260 270
....*....|....*....|....*....|....*.
gi 1622833664 1485 APGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG 1520
Cdd:NF038329 297 LPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDG 332
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1046-1275 |
1.43e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 68.78 E-value: 1.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1046 IGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGAMGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPG 1125
Cdd:NF038329 125 AGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAG 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1126 PPGPAGPRGERGPQGNSGEKGdqgfQGQPGFPGPPGPPGFPGKVGAPGPPGPQAEKGSEGIRGPSGMPGSPGPPGPPGIQ 1205
Cdd:NF038329 205 EQGPAGPAGPDGEAGPAGEDG----PAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGER 280
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1206 GPAGLDGLDGKDGKPGLRGDPGPagppglmgppgfKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1275
Cdd:NF038329 281 GPVGPAGKDGQNGKDGLPGKDGK------------DGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1212-1427 |
1.81e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 68.39 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1212 GLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGP 1291
Cdd:NF038329 126 GPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGE 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1292 PGPPGQpgpagisaVGLKGDRGATGERGLAgLPGQPGPPGHPGPPGEPGTDGAAGKEGPAGKQGlygPPGPKGDPGAAGQ 1371
Cdd:NF038329 206 QGPAGP--------AGPDGEAGPAGEDGPA-GPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDG---PRGDRGEAGPDGP 273
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622833664 1372 KGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMG 1427
Cdd:NF038329 274 DGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPG 329
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
502-728 |
2.57e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 67.62 E-value: 2.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 502 EKGDPCEVCPTLPEGFQSFVGLPGKPGPKGEPGdPVSARDHPKTVGQKGDRGDPGIQGIKGEKGESclSCSSVVGAQHLA 581
Cdd:NF038329 139 DRGETGPAGPAGPPGPQGERGEKGPAGPQGEAG-PQGPAGKDGEAGAKGPAGEKGPQGPRGETGPA--GEQGPAGPAGPD 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 582 SSTGASGDVGSPGFGLPGLPGKAGLPGLKGEKGNFGEAGPAGSPgppgpvgpvgikGAKGEPCEPCPALSNLQDGDVRVV 661
Cdd:NF038329 216 GEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKD------------GPRGDRGEAGPDGPDGKDGERGPV 283
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622833664 662 ALPGPSGEKGEPGPPGfglpgKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGP 728
Cdd:NF038329 284 GPAGKDGQNGKDGLPG-----KDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPGKPAPKTP 345
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
787-1120 |
4.21e-08 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 57.61 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 787 LKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGTSvsGPPGRDGQQGQ 866
Cdd:NF038329 107 DEGLQQLKGDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQ--GPAGKDGEAGA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 867 TGPRGTPGEKGPRGEKGEPGEcscpsrgdlvfsgmpgppgipgppgppgvPGLQGVPGNNGLPGQPGLTAELGSlpieqh 946
Cdd:NF038329 185 KGPAGEKGPQGPRGETGPAGE-----------------------------QGPAGPAGPDGEAGPAGEDGPAGP------ 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 947 llksiCGDCVQGQRAHPAYLVEKGEKGDQGIPGVLGldncaqcflslerpraeeARGDNNEGDPgcigspglpgpPGLPG 1026
Cdd:NF038329 230 -----AGDGQQGPDGDPGPTGEDGPQGPDGPAGKDG------------------PRGDRGEAGP-----------DGPDG 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1027 QRGEEgppgmrgspgppgpigppgfpgavGSPGLPGLQGERGLTGLTGDKGEPgppgqpgypgamGPPGLPGIKGERGYT 1106
Cdd:NF038329 276 KDGER------------------------GPVGPAGKDGQNGKDGLPGKDGKD------------GQNGKDGLPGKDGKD 319
|
330
....*....|....
gi 1622833664 1107 GSAGEKGEPGPPGS 1120
Cdd:NF038329 320 GQPGKDGLPGKDGK 333
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
684-886 |
6.25e-06 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 50.80 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 684 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGPKGEKGDGCTACPSLQGTVTDVAGRPGQPGP--KGE 761
Cdd:COG5164 54 TTPAGNTGGTRPAGNQGATGPAQNQGGTTPAQNQGGTRPAGNTGGTTPAGDGGATGPPDDGGATGPPDDGGSTTPpsGGS 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 762 PGPEGVG--RPGKPGQPGLPGVQGPPGLKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPG 839
Cdd:COG5164 134 TTPPGDGgsTPPGPGSTGPGGSTTPPGDGGSTTPPGPGGSTTPPDDGGSTTPPNKGETGTDIPTGGTPRQGPDGPVKKDD 213
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1622833664 840 VKGATGPvgppgtsvsgPPGRDGQQGQTGPRGTPGEKGPRGEKGEPG 886
Cdd:COG5164 214 KNGKGNP----------PDDRGGKTGPKDQRPKTNPIERRGPERPEA 250
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1371-1549 |
1.23e-05 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 49.52 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1371 QKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfder 1450
Cdd:NF038329 112 QLKGDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGE---------------------- 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1451 mayytsrmqfpmemaaaPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG-VGIAGENGL 1529
Cdd:NF038329 170 -----------------AGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGeDGPAGPAGD 232
|
170 180
....*....|....*....|
gi 1622833664 1530 PGPPGPQGPPGYGKMGATGP 1549
Cdd:NF038329 233 GQQGPDGDPGPTGEDGPQGP 252
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
757-815 |
9.81e-05 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 41.71 E-value: 9.81e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 757 GPKGEPGPegvgrPGKPGQPGLPGVQGPPGLKGMQGEPGPPG-RGVQGPQGEPGAPGLPG 815
Cdd:pfam01391 1 GPPGPPGP-----PGPPGPPGPPGPPGPPGPPGPPGEPGPPGpPGPPGPPGPPGAPGAPG 55
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
317-423 |
2.27e-04 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 45.67 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 317 PPCVHGAQDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGndcvrisPDAP-----LQCAEGPKGEKGQSGALGPSGL 391
Cdd:NF038329 240 DPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERG-------PVGPagkdgQNGKDGLPGKDGKDGQNGKDGL 312
|
90 100 110
....*....|....*....|....*....|..
gi 1622833664 392 PGSTGEKGQKGEkgdgglKGVPGKPGRDGRPG 423
Cdd:NF038329 313 PGKDGKDGQPGK------DGLPGKDGKDGQPG 338
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
1468-1520 |
3.10e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 40.17 E-value: 3.10e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1622833664 1468 PGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG 1520
Cdd:pfam01391 3 PGPPGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPG 55
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
699-887 |
4.65e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 4.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 699 AGNPGDPGTPGTTGRPGLSGEP-GVRGPAGPKGEKGDGCTACPSLQGTvtdvAGRPGQPGPKGEPGPEGVGRPGKPGQPG 777
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPaAPAAPAAPAAPAPAGAAAAPAEASA----APAPGVAAPEHHPKHVAVPDASDGGDGW 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 778 LPGVQGPPGLK---GMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGP--PGPTGEKGAQGSPGVKGATGPVGPPGT 852
Cdd:PRK07764 670 PAKAGGAAPAApppAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQppQAAQGASAPSPAADDPVPLPPEPDDPP 749
|
170 180 190
....*....|....*....|....*....|....*
gi 1622833664 853 SVSGPPGRDGQQGQTGPRGTPGEKGPRGEKGEPGE 887
Cdd:PRK07764 750 DPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEE 784
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
50-231 |
3.04e-58 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
Pssm-ID: 214560 Cd Length: 184 Bit Score: 199.12 E-value: 3.04e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 50 GFNLIRRLSLMKMS-AIKKIRNPKGP-LILRLG-AASVTQPTRRVFPRGLPEEFALVLTLLLKKhthQKTWYLFQVTDAD 126
Cdd:smart00210 1 GQDLLQVFDLPSLSfAIRQVVGPEPGsPAYRLGdPALVPQPTRDLFPSGLPEDFSLLTTFRQTP---KSRGVLFAIYDAQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 127 GYPQISLEVNNQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRR--PLRPVG 204
Cdd:smart00210 78 NVRQFGLEVDGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGqpPIDTDG 157
|
170 180
....*....|....*....|....*..
gi 1622833664 205 HVFLGLDAEQGKPVSFDLQQVHIYCDP 231
Cdd:smart00210 158 IEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
685-886 |
3.31e-25 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 110.77 E-value: 3.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 685 GKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGPKGEKGDGCTACPSLQGTVTDVAGRPGQPGPKGEPGP 764
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 765 EG-VGRPGKPGQPGLPGVQGPPGLKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRgppGPTGEKGAQGSPGVKGA 843
Cdd:NF038329 197 RGeTGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPA---GKDGPRGDRGEAGPDGP 273
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1622833664 844 TGPVGPpgtsvSGPPGRDGQQGQTGPRGTPGEKGPRGEKGEPG 886
Cdd:NF038329 274 DGKDGE-----RGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDG 311
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
550-814 |
1.18e-17 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 87.65 E-value: 1.18e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 550 GDRGDPGIQGIKGEKGESclscssvvgaqhlasstGASGDVGSPGfgLPGLPGKAGLPGLKGEKGNFGEAGPAGSPGPPG 629
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQ-----------------GPRGDRGETG--PAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAG 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 630 PVGPVGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPG 709
Cdd:NF038329 178 KDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAG 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 710 TTGRPGLSGEPGVRGPAGPKGEKGDgctacpslqgtvTDVAGRPGQPGPKGEPGPEgvGRPGKPGQPGLPGVQGPPGLKG 789
Cdd:NF038329 258 KDGPRGDRGEAGPDGPDGKDGERGP------------VGPAGKDGQNGKDGLPGKD--GKDGQNGKDGLPGKDGKDGQPG 323
|
250 260
....*....|....*....|....*
gi 1622833664 790 MQGEPGPPGRGVQGPQGEPGAPGLP 814
Cdd:NF038329 324 KDGLPGKDGKDGQPGKPAPKTPEVP 348
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
337-617 |
4.38e-15 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 79.56 E-value: 4.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 337 GGKGERGLPGPPGSKGEKGARGNDcvrispdaplqcaeGPKGEKGQSGALGPSGLPGSTGEKGQKGEKGDGGLKGVPGKP 416
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDR--------------GETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGppglpgppgiglpgtpgdpggppgpkgdkgssgiPGKEGPGGKPGK 496
Cdd:NF038329 183 GAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDG----------------------------------EAGPAGEDGPAG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 497 PGVKGEKGDPCEVCPTLPEGFQSFVGLPGKPGPKGEPGDPVSArdhpKTVGQKGDRGDPGIQGIKGEKGEsclscssvvg 576
Cdd:NF038329 229 PAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPD----GPDGKDGERGPVGPAGKDGQNGK---------- 294
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1622833664 577 aQHLASSTGASGDVGSPgfGLPGLPGKAGLPGLKGEKGNFG 617
Cdd:NF038329 295 -DGLPGKDGKDGQNGKD--GLPGKDGKDGQPGKDGLPGKDG 332
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1170-1413 |
7.48e-14 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 75.71 E-value: 7.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1170 GAPGPPGPQAEKGSEGIRGPSGMPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGL 1249
Cdd:NF038329 120 GEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1250 PGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGppghvgppgppgqpgpagisaVGLKGDRGATGERGLAGLPGQPGP 1329
Cdd:NF038329 200 TGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQ---------------------QGPDGDPGPTGEDGPQGPDGPAGK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1330 PGHPGPPGEPGTDGAAGKEGPAGKQGLYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPG 1409
Cdd:NF038329 259 DGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
....
gi 1622833664 1410 APGP 1413
Cdd:NF038329 339 KPAP 342
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1062-1275 |
5.38e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 73.02 E-value: 5.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1062 GLQGERGLTGLTGDKGEPGPPGQPGYPGAMGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGN 1141
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1142 SGEKGDQGFQGQPGFPGPPGPPGFPGKVGAPGPP-----GPQAEKGSEGIRGPSGMPGSPGPPGPPGIQGPAGLDGLDGK 1216
Cdd:NF038329 197 RGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAgdgqqGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGK 276
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622833664 1217 DGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1275
Cdd:NF038329 277 DGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDG 335
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1245-1520 |
8.62e-12 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 69.16 E-value: 8.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1245 GHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPghvgppgppgqpgpagisavGLKGDRGATGERGLAGLP 1324
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGER--------------------GEKGPAGPQGEAGPQGPA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1325 GQPGPPGHPGPPGEPGTDGAAGKEGPAGKQGLYGPPGPKGDPGAAGQKGQAGEKGRagmpGGPGKSGSMGPVGPPGPAGE 1404
Cdd:NF038329 177 GKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGD----GQQGPDGDPGPTGEDGPQGP 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1405 RGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfdermayytsrmqfpmemAAAPGRPGPPGKDGAPGRPG 1484
Cdd:NF038329 253 DGPAGKDGPRGDRGEAGPDGPDGK------------------------------------DGERGPVGPAGKDGQNGKDG 296
|
250 260 270
....*....|....*....|....*....|....*.
gi 1622833664 1485 APGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG 1520
Cdd:NF038329 297 LPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDG 332
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1046-1275 |
1.43e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 68.78 E-value: 1.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1046 IGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGAMGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPG 1125
Cdd:NF038329 125 AGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAG 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1126 PPGPAGPRGERGPQGNSGEKGdqgfQGQPGFPGPPGPPGFPGKVGAPGPPGPQAEKGSEGIRGPSGMPGSPGPPGPPGIQ 1205
Cdd:NF038329 205 EQGPAGPAGPDGEAGPAGEDG----PAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGER 280
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1206 GPAGLDGLDGKDGKPGLRGDPGPagppglmgppgfKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1275
Cdd:NF038329 281 GPVGPAGKDGQNGKDGLPGKDGK------------DGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1212-1427 |
1.81e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 68.39 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1212 GLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGP 1291
Cdd:NF038329 126 GPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGE 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1292 PGPPGQpgpagisaVGLKGDRGATGERGLAgLPGQPGPPGHPGPPGEPGTDGAAGKEGPAGKQGlygPPGPKGDPGAAGQ 1371
Cdd:NF038329 206 QGPAGP--------AGPDGEAGPAGEDGPA-GPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDG---PRGDRGEAGPDGP 273
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622833664 1372 KGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMG 1427
Cdd:NF038329 274 DGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPG 329
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
502-728 |
2.57e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 67.62 E-value: 2.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 502 EKGDPCEVCPTLPEGFQSFVGLPGKPGPKGEPGdPVSARDHPKTVGQKGDRGDPGIQGIKGEKGESclSCSSVVGAQHLA 581
Cdd:NF038329 139 DRGETGPAGPAGPPGPQGERGEKGPAGPQGEAG-PQGPAGKDGEAGAKGPAGEKGPQGPRGETGPA--GEQGPAGPAGPD 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 582 SSTGASGDVGSPGFGLPGLPGKAGLPGLKGEKGNFGEAGPAGSPgppgpvgpvgikGAKGEPCEPCPALSNLQDGDVRVV 661
Cdd:NF038329 216 GEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKD------------GPRGDRGEAGPDGPDGKDGERGPV 283
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622833664 662 ALPGPSGEKGEPGPPGfglpgKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGP 728
Cdd:NF038329 284 GPAGKDGQNGKDGLPG-----KDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPGKPAPKTP 345
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
787-1120 |
4.21e-08 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 57.61 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 787 LKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGTSvsGPPGRDGQQGQ 866
Cdd:NF038329 107 DEGLQQLKGDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQ--GPAGKDGEAGA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 867 TGPRGTPGEKGPRGEKGEPGEcscpsrgdlvfsgmpgppgipgppgppgvPGLQGVPGNNGLPGQPGLTAELGSlpieqh 946
Cdd:NF038329 185 KGPAGEKGPQGPRGETGPAGE-----------------------------QGPAGPAGPDGEAGPAGEDGPAGP------ 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 947 llksiCGDCVQGQRAHPAYLVEKGEKGDQGIPGVLGldncaqcflslerpraeeARGDNNEGDPgcigspglpgpPGLPG 1026
Cdd:NF038329 230 -----AGDGQQGPDGDPGPTGEDGPQGPDGPAGKDG------------------PRGDRGEAGP-----------DGPDG 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1027 QRGEEgppgmrgspgppgpigppgfpgavGSPGLPGLQGERGLTGLTGDKGEPgppgqpgypgamGPPGLPGIKGERGYT 1106
Cdd:NF038329 276 KDGER------------------------GPVGPAGKDGQNGKDGLPGKDGKD------------GQNGKDGLPGKDGKD 319
|
330
....*....|....
gi 1622833664 1107 GSAGEKGEPGPPGS 1120
Cdd:NF038329 320 GQPGKDGLPGKDGK 333
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
684-886 |
6.25e-06 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 50.80 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 684 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVRGPAGPKGEKGDGCTACPSLQGTVTDVAGRPGQPGP--KGE 761
Cdd:COG5164 54 TTPAGNTGGTRPAGNQGATGPAQNQGGTTPAQNQGGTRPAGNTGGTTPAGDGGATGPPDDGGATGPPDDGGSTTPpsGGS 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 762 PGPEGVG--RPGKPGQPGLPGVQGPPGLKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPG 839
Cdd:COG5164 134 TTPPGDGgsTPPGPGSTGPGGSTTPPGDGGSTTPPGPGGSTTPPDDGGSTTPPNKGETGTDIPTGGTPRQGPDGPVKKDD 213
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1622833664 840 VKGATGPvgppgtsvsgPPGRDGQQGQTGPRGTPGEKGPRGEKGEPG 886
Cdd:COG5164 214 KNGKGNP----------PDDRGGKTGPKDQRPKTNPIERRGPERPEA 250
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1371-1549 |
1.23e-05 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 49.52 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1371 QKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfder 1450
Cdd:NF038329 112 QLKGDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGE---------------------- 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 1451 mayytsrmqfpmemaaaPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG-VGIAGENGL 1529
Cdd:NF038329 170 -----------------AGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGeDGPAGPAGD 232
|
170 180
....*....|....*....|
gi 1622833664 1530 PGPPGPQGPPGYGKMGATGP 1549
Cdd:NF038329 233 GQQGPDGDPGPTGEDGPQGP 252
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
757-815 |
9.81e-05 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 41.71 E-value: 9.81e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 757 GPKGEPGPegvgrPGKPGQPGLPGVQGPPGLKGMQGEPGPPG-RGVQGPQGEPGAPGLPG 815
Cdd:pfam01391 1 GPPGPPGP-----PGPPGPPGPPGPPGPPGPPGPPGEPGPPGpPGPPGPPGPPGAPGAPG 55
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
317-423 |
2.27e-04 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 45.67 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 317 PPCVHGAQDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGndcvrisPDAP-----LQCAEGPKGEKGQSGALGPSGL 391
Cdd:NF038329 240 DPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERG-------PVGPagkdgQNGKDGLPGKDGKDGQNGKDGL 312
|
90 100 110
....*....|....*....|....*....|..
gi 1622833664 392 PGSTGEKGQKGEkgdgglKGVPGKPGRDGRPG 423
Cdd:NF038329 313 PGKDGKDGQPGK------DGLPGKDGKDGQPG 338
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
1468-1520 |
3.10e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 40.17 E-value: 3.10e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1622833664 1468 PGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG 1520
Cdd:pfam01391 3 PGPPGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPG 55
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
699-876 |
3.36e-04 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 45.38 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 699 AGNPGDPGTPGTTGRPGLSGEPGVRGPAGPK------GEKGDGCTACPSLQGTVTDVAGRPGQPGPKGEPGPEGVgrPGK 772
Cdd:pfam09606 111 GQQMGGPGTASNLLASLGRPQMPMGGAGFPSqmsrvgRMQPGGQAGGMMQPSSGQPGSGTPNQMGPNGGPGQGQA--GGM 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 773 PGQPGLPGVQGPPGLKGMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGpvGPPGT 852
Cdd:pfam09606 189 NGGQQGPMGGQMPPQMGVPGMPGPADAGAQMGQQAQANGGMNPQQMGGAPNQVAMQQQQPQQQGQQSQLGMGI--NQMQQ 266
|
170 180
....*....|....*....|....
gi 1622833664 853 SVSGPPGRDGQQGQTGPRGTPGEK 876
Cdd:pfam09606 267 MPQGVGGGAGQGGPGQPMGPPGQQ 290
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
699-887 |
4.65e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 4.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 699 AGNPGDPGTPGTTGRPGLSGEP-GVRGPAGPKGEKGDGCTACPSLQGTvtdvAGRPGQPGPKGEPGPEGVGRPGKPGQPG 777
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPaAPAAPAAPAAPAPAGAAAAPAEASA----APAPGVAAPEHHPKHVAVPDASDGGDGW 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 778 LPGVQGPPGLK---GMQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGP--PGPTGEKGAQGSPGVKGATGPVGPPGT 852
Cdd:PRK07764 670 PAKAGGAAPAApppAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQppQAAQGASAPSPAADDPVPLPPEPDDPP 749
|
170 180 190
....*....|....*....|....*....|....*
gi 1622833664 853 SVSGPPGRDGQQGQTGPRGTPGEKGPRGEKGEPGE 887
Cdd:PRK07764 750 DPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEE 784
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
1467-1517 |
6.23e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 39.40 E-value: 6.23e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1622833664 1467 APGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKG 1517
Cdd:pfam01391 5 PPGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPG 55
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
716-887 |
4.71e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 41.43 E-value: 4.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 716 LSGEPGVRGPAGPKgeKGDGCTACPSLQ-GTVTDVAGRPGQPGPKGEPGPEGVGRPGKPGQPGLPGVQGPPglKGMQGEP 794
Cdd:PRK12678 34 LAKQLGIKGTSGMR--KGELIAAIKEARgGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKA--EAAPAAR 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622833664 795 GPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPgVKGATGPVGPPGTSVSGPPGRDGQQGQTGPRGTPG 874
Cdd:PRK12678 110 AAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPA-TEARADAAERTEEEERDERRRRGDREDRQAEAERG 188
|
170
....*....|...
gi 1622833664 875 EKGPRGEKGEPGE 887
Cdd:PRK12678 189 ERGRREERGRDGD 201
|
|
| |
