|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
190-839 |
9.68e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 9.68e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 190 KTKKNAAivEEELKTTKRKM---NLKIQELRRQLAQ--------EKY--LRESL-EKSASAMLLKIQEMGSAVEVERKQv 255
Cdd:COG1196 171 KERKEEA--ERKLEATEENLerlEDILGELERQLEPlerqaekaERYreLKEELkELEAELLLLKLRELEAELEELEAE- 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 256 hilqqncialhdsIQSTQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSL 335
Cdd:COG1196 248 -------------LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 336 HEASEKAQVLNDQLTKKCSELScmlqtvtmEKARIIADHQAILQVEQKMMTQTFQEQNLLLDAAHASITNELQTVQNEKT 415
Cdd:COG1196 315 EERLEELEEELAELEEELEELE--------EELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 416 QLQAHLDHLILEHNQcIQKAQDAEKRTAVQKELLESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNL 495
Cdd:COG1196 387 ELLEALRAAAELAAQ-LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 496 EKELAKNKLAQQKVEKILGKITESKNKLAYEKgklqikvkQLEEQVQSFTDtslqnDHLRKMNKSLQTKYAQVKSILERS 575
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLL--------EAEADYEGFLE-----GVKAALLLAGLRGLAGAVAVLIGV 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 576 KEELSRTVKCRNAALKESQKLKEDLEAvedrenKKVGNFQRQLAEAKednckVTIMLENVLASHSKMQGALEKVQIELGR 655
Cdd:COG1196 533 EAAYEAALEAALAAALQNIVVEDDEVA------AAAIEYLKAAKAGR-----ATFLPLDKIRARAALAAALARGAIGAAV 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 656 RdsEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLD 735
Cdd:COG1196 602 D--LVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEA 679
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 736 HIQEQLESKELERQNLETFKDQMTEESKVEAELHAERIEALRKQFQTERETAKKVAQREVAELKKALDEAnfrsvEVSRT 815
Cdd:COG1196 680 ELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLE-----EEALE 754
|
650 660
....*....|....*....|....
gi 966929318 816 NRELRQKLAELEKILESNKEKIKN 839
Cdd:COG1196 755 ELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
137-978 |
8.75e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.78 E-value: 8.75e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 137 DRLNTVQEEHSKDLKLLHLEVmNLRQQLRAVKEEEDKAQ-----DEVQRLTATLEIASKTKKNAAIVEEELKTTKRKMNL 211
Cdd:TIGR02168 189 DRLEDILNELERQLKSLERQA-EKAERYKELKAELRELElallvLRLEELREELEELQEELKEAEEELEELTAELQELEE 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 212 KIQELRRQlaqekylRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKEELETATS 291
Cdd:TIGR02168 268 KLEELRLE-------VSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 292 QLKSDLTSrddliskLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQvlndqltkkcselscmlqtvtmekarii 371
Cdd:TIGR02168 341 ELEEKLEE-------LKEELESLEAELEELEAELEELESRLEELEEQLETLR---------------------------- 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 372 adhQAILQVEQKMmtqtfqeqnllldaahASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAE-KRTAVQKELLE 450
Cdd:TIGR02168 386 ---SKVAQLELQI----------------ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElKELQAELEELE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 451 STIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQ--ERCNLEKELAKNKLAQQKVEKILgkiTESKNKLAYEKG 528
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQlqARLDSLERLQENLEGFSEGVKAL---LKNQSGLSGILG 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 529 KL--QIKV-KQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILER-SKEELSRTVKCRNAALKESQKLKEDLEAVE 604
Cdd:TIGR02168 524 VLseLISVdEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRvTFLPLDSIKGTEIQGNDREILKNIEGFLGV 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 605 DRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKV--QIELGRRDSEIAGLKKERDLNqqrVQKLEAEVD 682
Cdd:TIGR02168 604 AKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVtlDGDLVRPGGVITGGSAKTNSS---ILERRREIE 680
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 683 QWQARMLVMEDQhnseIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEES 762
Cdd:TIGR02168 681 ELEEKIEELEEK----IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 763 KVEAELHAERIEALRKQFQTERETAKKVAQRE--VAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQ 840
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEIEELEaqIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 841 KTQIKLHLSAKANNAQNIERM-KQIEKELKQMELIKDQYQKKNYEQSLSIQRfvceMTNLQKEMQMLAKSQYDASVRNKQ 919
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLaAEIEELEELIEELESELEALLNERASLEEA----LALLRSELEELSEELRELESKRSE 912
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 920 QELCLEAERKIRQELENRCQELEETIRHLK-KCKEATENKLKEASVESEQITANLEEAHR 978
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDNLQeRLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
564-878 |
6.99e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.97 E-value: 6.99e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 564 KYAQVKSILERSKEELSRtvkcrnAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDnckvtimLENVLASHSKMQ 643
Cdd:COG1196 214 RYRELKEELKELEAELLL------LKLRELEAELEELEAELEELEAELEELEAELAELEAE-------LEELRLELEELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 644 GALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNS---EIESLQKALDVAREDNRKLAVSL 720
Cdd:COG1196 281 LELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEEleeELEELEEELEEAEEELEEAEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 721 EQALQTNNHLQTKLDHIQEQLESKELERQNLETfkdqmTEESKVEAELHAERIEALRKQFQTERETAKKVAQREVAELKK 800
Cdd:COG1196 361 AEAEEALLEAEAELAEAEEELEELAEELLEALR-----AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 801 ALDEAnfrsvevSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQMELIKDQY 878
Cdd:COG1196 436 EEEEE-------EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
98-804 |
2.02e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 2.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 98 EFLVNRMCRLESLIQSLKMNIFRLQTEKDLNPQKTAFLKDRLNTVQeehsKDLKLLHLEVMNLRQQLRAVKEEEDKAQDE 177
Cdd:TIGR02168 270 EELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLE----RQLEELEAQLEELESKLDELAEELAELEEK 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 178 VQRLTATLEIASKTKKNAAIVEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKsasamllKIQEMGSAVEVERKQVHI 257
Cdd:TIGR02168 346 LEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNN-------EIERLEARLERLEDRRER 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 258 LQQNCIALHDSIQSTQ--ELLAQEQQKKEELETATSQLkSDLTSRDDLISKLVEENKNLQISFNKEHEEnayLRSKITSL 335
Cdd:TIGR02168 419 LQQEIEELLKKLEEAElkELQAELEELEEELEELQEEL-ERLEEALEELREELEEAEQALDAAERELAQ---LQARLDSL 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 336 HEASEKAQVLND---QLTKKCSELSCMLQTVT--------MEKARIIADHQAILQVEQKMMTQTFQEQNLLLDAAHASIT 404
Cdd:TIGR02168 495 ERLQENLEGFSEgvkALLKNQSGLSGILGVLSelisvdegYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVT 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 405 NELQTVQNEkTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQKELLESTIARLR-GELEASVQEKKSLLEEKERF------ 477
Cdd:TIGR02168 575 FLPLDSIKG-TEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvVDDLDNALELAKKLRPGYRIvtldgd 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 478 ----QREVNKTEKEIAQERCNLEKELAKNklaQQKVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQNDH 553
Cdd:TIGR02168 654 lvrpGGVITGGSAKTNSSILERRREIEEL---EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISA 730
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 554 LRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDR---ENKKVGNFQRQLAEAKEDNCKVTI 630
Cdd:TIGR02168 731 LRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEieeLEAQIEQLKEELKALREALDELRA 810
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 631 MLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNS---EIESLQKALD 707
Cdd:TIGR02168 811 ELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAllnERASLEEALA 890
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 708 VAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELE----RQNLETFKDQMTEESKVEAELHAERIEalrkqfqtE 783
Cdd:TIGR02168 891 LLRSELEELSEELRELESKRSELRRELEELREKLAQLELRleglEVRIDNLQERLSEEYSLTLEEAEALEN--------K 962
|
730 740
....*....|....*....|.
gi 966929318 784 RETAKKVAQREVAELKKALDE 804
Cdd:TIGR02168 963 IEDDEEEARRRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
435-978 |
3.93e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 3.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 435 AQDAEKRTAVQKELLE-------STIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQ 507
Cdd:COG1196 209 AEKAERYRELKEELKEleaelllLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 508 KVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRtvkcRN 587
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE----AE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 588 AALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDnckvtimLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKER 667
Cdd:COG1196 365 EALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ-------LEELEEAEEALLERLERLEEELEELEEALAELEEEE 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 668 DLNQQRVQKLEAEVDQWQARMLVMEDQHNS---EIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESK 744
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAElleEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 745 ELERQnLETFKDQMTEESKVEAELHAERIEALRKQFQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLA 824
Cdd:COG1196 518 GLRGL-AGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGA 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 825 ELEKILESNKEKIknqktqiklHLSAKANNAQNIERMKQIEKELKQMELikdqYQKKNYEQSLSIQRFVCEMTNLQKEMQ 904
Cdd:COG1196 597 IGAAVDLVASDLR---------EADARYYVLGDTLLGRTLVAARLEAAL----RRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966929318 905 MLAKSQYDASVRNKQQELCLEAERKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITANLEEAHR 978
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
283-975 |
2.41e-10 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 64.99 E-value: 2.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 283 KEELETATSQLKSDLT-----SRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLTKkCSELS 357
Cdd:TIGR00618 195 KAELLTLRSQLLTLCTpcmpdTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRAR-IEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 358 CMLQTVTM---------EKARIIADHQAILQVEQKMMT--QTFQEQNLLLdaahASITNELQTVQNEKTQLQAHLDHLIL 426
Cdd:TIGR00618 274 AQEAVLEEtqerinrarKAAPLAAHIKAVTQIEQQAQRihTELQSKMRSR----AKLLMKRAAHVKQQSSIEEQRRLLQT 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 427 EHNQCIQKAQDAEKRTAVQKEL-----LESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERcnlekelak 501
Cdd:TIGR00618 350 LHSQEIHIRDAHEVATSIREIScqqhtLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFR--------- 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 502 nklaqqkveKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTdtsLQNDHLRKMNKSLQTKYAQVKSiLERSKEELSR 581
Cdd:TIGR00618 421 ---------DLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEK---LEKIHLQESAQSLKEREQQLQT-KEQIHLQETR 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 582 TVKCRNAALKESQKLKEDLEAVEDRENKKvgnfqRQLAEAKEDNCKVTIMLENvlaSHSKMQGALEKVQIELGRRDSEIA 661
Cdd:TIGR00618 488 KKAVVLARLLELQEEPCPLCGSCIHPNPA-----RQDIDNPGPLTRRMQRGEQ---TYAQLETSEEDVYHQLTSERKQRA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 662 GLKKERDLNQQRVQKLeaeVDQWQARMLVMEDQHNsEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQL 741
Cdd:TIGR00618 560 SLKEQMQEIQQSFSIL---TQCDNRSKEDIPNLQN-ITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQ 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 742 ESKELERQNLETFKDQMTEESKVEAELHAERIEALRKQFQTERETAKKVAQREVAELKKALDEanfrsvevsrtnreLRQ 821
Cdd:TIGR00618 636 QCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEM--------------LAQ 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 822 KLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELkqMELIKDQYQKKNYEQSLSIQRFVCEMTNLQK 901
Cdd:TIGR00618 702 CQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKEL--MHQARTVLKARTEAHFNNNEEVTAALQTGAE 779
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966929318 902 EMQMLAKSQYDASVRNKQQELCLEAERKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITANLEE 975
Cdd:TIGR00618 780 LSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLK 853
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
460-845 |
4.31e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.84 E-value: 4.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 460 LEASVQEKKSLLEEK---ERFQREVNKTEKEIAQERCNLEkelaknklaqqKVEKILGKITESKNKLaYEKGKLQIKVKQ 536
Cdd:TIGR02168 150 IEAKPEERRAIFEEAagiSKYKERRKETERKLERTRENLD-----------RLEDILNELERQLKSL-ERQAEKAERYKE 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 537 LEEQVQSfTDTSLQNDHLrkmnKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQR 616
Cdd:TIGR02168 218 LKAELRE-LELALLVLRL----EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 617 QLAEAKEdnckvtimLENVLASHSKmqgALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHN 696
Cdd:TIGR02168 293 LANEISR--------LEQQKQILRE---RLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 697 S------EIESLQKALDVARED-NRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAELH 769
Cdd:TIGR02168 362 EleaeleELESRLEELEEQLETlRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE 441
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966929318 770 AERIEALRKQFQTERETakkvAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIK 845
Cdd:TIGR02168 442 LEELEEELEELQEELER----LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK 513
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
428-949 |
8.35e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.15 E-value: 8.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 428 HNQCIQKAQDAEKRTAVQKELLESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQ 507
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 508 KVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSK--EELSRT--- 582
Cdd:PTZ00121 1330 KADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKkaEEDKKKade 1409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 583 VKCRNAALKESQKLKEDLEAV-------EDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGR 655
Cdd:PTZ00121 1410 LKKAAAAKKKADEAKKKAEEKkkadeakKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK 1489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 656 RDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNSE---------IESLQKALDVAREDNRKLAVSLEQALQT 726
Cdd:PTZ00121 1490 KKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEakkadeakkAEEKKKADELKKAEELKKAEEKKKAEEA 1569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 727 NNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAELHAERIEALRK--QFQTERETAKKVAQ---------REV 795
Cdd:PTZ00121 1570 KKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeELKKAEEEKKKVEQlkkkeaeekKKA 1649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 796 AELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNK---EKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQME 872
Cdd:PTZ00121 1650 EELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKkaaEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENK 1729
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966929318 873 LIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDASVRNKQQELCLEAErkIRQELENRCQELEETIRHLK 949
Cdd:PTZ00121 1730 IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE--LDEEDEKRRMEVDKKIKDIF 1804
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
103-835 |
2.75e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 103 RMCRLESLIQSLKMNIFRLQTEKDLNPQKTAFLKDRLNTVQEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLT 182
Cdd:TIGR02169 185 NIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 183 ATLEIASKTkknaaiVEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQEMgsavevERKqvhilQQNC 262
Cdd:TIGR02169 265 KRLEEIEQL------LEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA------EER-----LAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 263 IALHDSIQSTQELLAQE-QQKKEELETATSQLKSDLTSRDDLISKLVEENKNLQISFnkehEENAYLRSKITSLHEASEK 341
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREiEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETR----DELKDYREKLEKLKREINE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 342 AQVLNDQLTKKCSELSCMLQTVTMEKARIIADHQA-----------ILQVEQKMMtqTFQEQNLLLDAAHASITNELQTV 410
Cdd:TIGR02169 404 LKRELDRLQEELQRLSEELADLNAAIAGIEAKINEleeekedkaleIKKQEWKLE--QLAADLSKYEQELYDLKEEYDRV 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 411 QNEKTQLQAHLDHLILEhnqcIQKAQDAEKRTAVQKELLESTIARLRGELE--ASVQEKKSLLEEKE---RFQREVNKTE 485
Cdd:TIGR02169 482 EKELSKLQRELAEAEAQ----ARASEERVRGGRAVEEVLKASIQGVHGTVAqlGSVGERYATAIEVAagnRLNNVVVEDD 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 486 kEIAQERCNLEKE--------LAKNKLAQQKVEKIL----GKITESKNKLAYEKgKLQIKVKQL-------------EEQ 540
Cdd:TIGR02169 558 -AVAKEAIELLKRrkagratfLPLNKMRDERRDLSIlsedGVIGFAVDLVEFDP-KYEPAFKYVfgdtlvvedieaaRRL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 541 VQSFTDTSLQNDHLRK---------MNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDR---EN 608
Cdd:TIGR02169 636 MGKYRMVTLEGELFEKsgamtggsrAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQElsdAS 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 609 KKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARM 688
Cdd:TIGR02169 716 RKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPE 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 689 LVME-DQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKvEAE 767
Cdd:TIGR02169 796 IQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE-ELE 874
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966929318 768 LHAERIEALRKQFQTERETAKK---VAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKE 835
Cdd:TIGR02169 875 AALRDLESRLGDLKKERDELEAqlrELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEE 945
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
496-843 |
3.37e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.77 E-value: 3.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 496 EKELAKNKLAQ--QKVEKILGKITESKN---KLAYEKGKLqIKVKQLEEQVQSFTDTSLQNDhLRKMNKSLQTKYAQVKS 570
Cdd:TIGR02169 171 KKEKALEELEEveENIERLDLIIDEKRQqleRLRREREKA-ERYQALLKEKREYEGYELLKE-KEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 571 iLERSKEELSRTVKCRNaalKESQKLKEDLEAVEDRENKKVGNFQRQLaeaKEDNCKVTIMLENVLASHS-------KMQ 643
Cdd:TIGR02169 249 -LEEELEKLTEEISELE---KRLEEIEQLLEELNKKIKDLGEEEQLRV---KEKIGELEAEIASLERSIAekereleDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 644 GALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEdqhnSEIESLQKALDVAREDNRKLAVSLEQA 723
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLR----AELEEVDKEFAETRDELKDYREKLEKL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 724 LQTNNHLQTKLDHIQEQLESKELERQNLEtfkdqmteeskveaelhaERIEALRKQfQTERETAKKVAQREVAELKKALD 803
Cdd:TIGR02169 398 KREINELKRELDRLQEELQRLSEELADLN------------------AAIAGIEAK-INELEEEKEDKALEIKKQEWKLE 458
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 966929318 804 EANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQ 843
Cdd:TIGR02169 459 QLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQ 498
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
396-942 |
4.33e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.36 E-value: 4.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 396 LDAAHASITNELQTVQNEKTQLQAHLDHL---ILEHnqciqkaqdAEKRTAVqkELLESTIARLRGELEASVQEKKSLLE 472
Cdd:PRK02224 211 LESELAELDEEIERYEEQREQARETRDEAdevLEEH---------EERREEL--ETLEAEIEDLRETIAETEREREELAE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 473 EKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQND 552
Cdd:PRK02224 280 EVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 553 HLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKkvgnFQRQLAEAKEDNCKVTIML 632
Cdd:PRK02224 360 ELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEE----LREERDELREREAELEATL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 633 ENVLASHSKMQGALEKVQI-ELGR--RDSEIAGLKKERDlnqQRVQKLEAEVDQWQArmlvmedqhnsEIESLQKALDVA 709
Cdd:PRK02224 436 RTARERVEEAEALLEAGKCpECGQpvEGSPHVETIEEDR---ERVEELEAELEDLEE-----------EVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 710 REdnrklAVSLEQALQTnnhLQTKLDHIQEQLESKeleRQNLETFKDQMTEESKVEAELHAErIEALRKQFQTERETAKK 789
Cdd:PRK02224 502 ED-----LVEAEDRIER---LEERREDLEELIAER---RETIEEKRERAEELRERAAELEAE-AEEKREAAAEAEEEAEE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 790 VAQrEVAELKKALDEANFRsVEVSRTNRELRQKLAELEKILESNKEKIKN---QKTQIKLHLSAKAnnaqniERMKQIEK 866
Cdd:PRK02224 570 ARE-EVAELNSKLAELKER-IESLERIRTLLAAIADAEDEIERLREKREAlaeLNDERRERLAEKR------ERKRELEA 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 867 ELKQMELIKDQYQKKNYEQSLS-----IQRFVCEMTNLQKEMQMlaksqydasVRNKQQELclEAERKIRQELENRCQEL 941
Cdd:PRK02224 642 EFDEARIEEAREDKERAEEYLEqveekLDELREERDDLQAEIGA---------VENELEEL--EELRERREALENRVEAL 710
|
.
gi 966929318 942 E 942
Cdd:PRK02224 711 E 711
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
328-975 |
5.06e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.39 E-value: 5.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 328 LRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTMEKARIIADHQaiLQVEQKMmtQTFQEQNLLLDAAHASITNEL 407
Cdd:TIGR02169 242 IERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ--LRVKEKI--GELEAEIASLERSIAEKEREL 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 408 QTVQNEKTQLQAHLDHLILEHNQCIQKAQD-AEKRTAVQKEL--LESTIARLRGELE-------ASVQEKKSLLEEKERF 477
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEELEREIEEeRKRRDKLTEEYaeLKEELEDLRAELEevdkefaETRDELKDYREKLEKL 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 478 QREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITEsknkLAYEKGKLQIKVKQLEEQVQSftdTSLQNDHLRKM 557
Cdd:TIGR02169 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE----LEEEKEDKALEIKKQEWKLEQ---LAADLSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 558 NKSLQTKYAQVKSILERSKEELSRtVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEdnckvtimlENVLA 637
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAE-AEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGE---------RYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 638 SHSKMQGALEKVQIEL-GRRDSEIAGLKKER-------DLNQQRVQKLEAEVdqwqarmlvmedqhNSEIESLQKALDVA 709
Cdd:TIGR02169 541 IEVAAGNRLNNVVVEDdAVAKEAIELLKRRKagratflPLNKMRDERRDLSI--------------LSEDGVIGFAVDLV 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 710 REDnRKLAVSLEQALQTN---NHLQTKLDHIQE----QLESKELERQNLET-------FKDQMTEESKVEAELHAERIEA 775
Cdd:TIGR02169 607 EFD-PKYEPAFKYVFGDTlvvEDIEAARRLMGKyrmvTLEGELFEKSGAMTggsraprGGILFSRSEPAELQRLRERLEG 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 776 LRKQFQTeretakkvAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANna 855
Cdd:TIGR02169 686 LKRELSS--------LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEN-- 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 856 qNIERMKQIEKELKQMELIKDQYQKK--NYEQSLS---IQRFVCEMTNLQKEMQMLAKSQYDASVRNKQQELCLEAERKI 930
Cdd:TIGR02169 756 -VKSELKELEARIEELEEDLHKLEEAlnDLEARLShsrIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 966929318 931 RQELENRCQELEE-------TIRHLKKCKEATENKLKEASVESEQITANLEE 975
Cdd:TIGR02169 835 IQELQEQRIDLKEqiksiekEIENLNGKKEELEEELEELEAALRDLESRLGD 886
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
432-975 |
1.10e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.23 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 432 IQKAQDAEKRTAVQKELLESTIARLRGELEASvQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEK 511
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRT-ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 512 ILGKITESKNKLAY---EKGKLQIKVKQLEEQVQSftdtslqndhLRKMNKSLQTKYAQVKSIlERSKEELSRTVKCRNA 588
Cdd:PRK03918 236 LKEEIEELEKELESlegSKRKLEEKIRELEERIEE----------LKKEIEELEEKVKELKEL-KEKAEEYIKLSEFYEE 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 589 ALKESQKLKEDLEAVEDREN------KKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQiELGRRDSEIAG 662
Cdd:PRK03918 305 YLDELREIEKRLSRLEEEINgieeriKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKE-ELERLKKRLTG 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 663 LKKERDLNQ-QRVQKLEAEVDQWQARMLVMEDQHNSEIESLQKALDVAREDNRKLAVSleQALQTNNHLQTKLDHIQEQL 741
Cdd:PRK03918 384 LTPEKLEKElEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVC--GRELTEEHRKELLEEYTAEL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 742 ESKELERQNLETFKDQM-TEESKVEAELHAE-RIEALRKQFQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNREL 819
Cdd:PRK03918 462 KRIEKELKEIEEKERKLrKELRELEKVLKKEsELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEI 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 820 RQKLAELEKI--LESNKEKIKNQKTQIKLHLSAKANNAQNI--ERMKQIEKELKQMELIKDQYQK-KNYEQSLSI--QRF 892
Cdd:PRK03918 542 KSLKKELEKLeeLKKKLAELEKKLDELEEELAELLKELEELgfESVEELEERLKELEPFYNEYLElKDAEKELEReeKEL 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 893 VCEMTNLQKEMQMLAKSQYDA-SVRNKQQELCLEAERKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITA 971
Cdd:PRK03918 622 KKLEEELDKAFEELAETEKRLeELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE 701
|
....
gi 966929318 972 NLEE 975
Cdd:PRK03918 702 ELEE 705
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
568-910 |
1.28e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.84 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 568 VKSILERSKEELSRTVKCRNAALKeSQKLKEDLEAVEDREnkkvgnfqrqLAEAKEDNCKvtiMLENVLASHSKMQGALE 647
Cdd:TIGR02169 189 LDLIIDEKRQQLERLRREREKAER-YQALLKEKREYEGYE----------LLKEKEALER---QKEAIERQLASLEEELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 648 KVQIELGRRDSEIAGLKKERDLNQQRVQKL-EAEVDQWQARMLVMEdqhnSEIESLQKALDVAREDNRKLAVSLEQALQT 726
Cdd:TIGR02169 255 KLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELE----AEIASLERSIAEKERELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 727 NNHLQTKLDHIQEQLESKELERQNLETfkdqMTEESKVEAELHAERIEALRKQFQTERETAKKVaQREVAELKKALDEAN 806
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTE----EYAELKEELEDLRAELEEVDKEFAETRDELKDY-REKLEKLKREINELK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 807 FRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKlhlsakannaQNIERMKQIEKELKQMELIKDQYQKKNYEQS 886
Cdd:TIGR02169 406 RELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKE----------DKALEIKKQEWKLEQLAADLSKYEQELYDLK 475
|
330 340
....*....|....*....|....
gi 966929318 887 LSIQRFVCEMTNLQKEMQMLAKSQ 910
Cdd:TIGR02169 476 EEYDRVEKELSKLQRELAEAEAQA 499
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
406-980 |
1.62e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 406 ELQTVQNEKTQLQAHLDHLILEHNQ-CIQKAQDAEKRTAVQKELLESTIARLR-----GELEASVQEKKSLLEEKERFQR 479
Cdd:pfam01576 13 ELQKVKERQQKAESELKELEKKHQQlCEEKNALQEQLQAETELCAEAEEMRARlaarkQELEEILHELESRLEEEEERSQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 480 EVNKTEKEIAQERCNLEKELAKNKLAQQK-------VEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQND 552
Cdd:pfam01576 93 QLQNEKKKMQQHIQDLEEQLDEEEAARQKlqlekvtTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 553 HLRKMNKSLQTKYAQVKSILE--RSKEELSRtvkcrnaalKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTI 630
Cdd:pfam01576 173 EKAKSLSKLKNKHEAMISDLEerLKKEEKGR---------QELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 631 MLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKerDLNQQRVQKLEAEV------DQWQARMLVMED----------- 693
Cdd:pfam01576 244 ELQAALARLEEETAQKNNALKKIRELEAQISELQE--DLESERAARNKAEKqrrdlgEELEALKTELEDtldttaaqqel 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 694 --QHNSEIESLQKALDvarEDNRKLAVSLEQALQTNNhlqTKLDHIQEQLESKELERQNLETFKDQMTEESkveAELHAE 771
Cdd:pfam01576 322 rsKREQEVTELKKALE---EETRSHEAQLQEMRQKHT---QALEELTEQLEQAKRNKANLEKAKQALESEN---AELQAE 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 772 RieALRKQFQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEK-IKNQK--TQIKLHL 848
Cdd:pfam01576 393 L--RTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKnIKLSKdvSSLESQL 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 849 SAKANNAQNIERMK-QIEKELKQMELIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDASVRNKQQElclEAE 927
Cdd:pfam01576 471 QDTQELLQEETRQKlNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALE---EGK 547
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 966929318 928 RKIRQELENRCQELEE---TIRHLKKCKEATENKLKEASVE---SEQITANLEEAHRWF 980
Cdd:pfam01576 548 KRLQRELEALTQQLEEkaaAYDKLEKTKNRLQQELDDLLVDldhQRQLVSNLEKKQKKF 606
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
106-679 |
2.34e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.94 E-value: 2.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 106 RLESLIQSLKMNIFRLQTEKDLNPQKTAFLKDRLNTVQEEhskdLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATL 185
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELE----LEEAQAEEYELLAELARLEQDIARLEERRRELEERL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 186 EIASKTKKNAAIVEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIAL 265
Cdd:COG1196 319 EELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAEL 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 266 HDSIQSTQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVL 345
Cdd:COG1196 399 AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 346 NDQLtkkcselscmLQTVTMEKARIIADHQAILQVEQKMMTQTFQEQNLLLDAAHASITNELQTVQNEKTQLQAHLdhLI 425
Cdd:COG1196 479 LAEL----------LEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL--AA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 426 LEHNQCIQKAQDAEKRTAVQKELLESTIARLRgeleasvqekksLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLA 505
Cdd:COG1196 547 ALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP------------LDKIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 506 QQKVEKILGKITesknklaYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKC 585
Cdd:COG1196 615 YYVLGDTLLGRT-------LVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAER 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 586 RNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKK 665
Cdd:COG1196 688 LAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELER 767
|
570
....*....|....
gi 966929318 666 ERDLNQQRVQKLEA 679
Cdd:COG1196 768 ELERLEREIEALGP 781
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
720-993 |
3.19e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.69 E-value: 3.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 720 LEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAELHAERIEALRKQF-QTERETAKKvaQREVAEL 798
Cdd:TIGR02169 179 LEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKeAIERQLASL--EEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 799 KKALDEANFRSVEVSRTNRELRQKLAEL-EKILESNKEKIKNQKTQIKlhlSAKANNAQNIERMKQIEKELKQMELIKDQ 877
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIA---SLERSIAEKERELEDAEERLAKLEAEIDK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 878 YQKKNYEQSLSIQRFVCEMTNLQKEMQMLaKSQYDASVRNKQQElcLEAERKIRQELENRCQELEETIRHLKKCKEATEN 957
Cdd:TIGR02169 334 LLAEIEELEREIEEERKRRDKLTEEYAEL-KEELEDLRAELEEV--DKEFAETRDELKDYREKLEKLKREINELKRELDR 410
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 966929318 958 KLKEASVESEQIT------ANLEEAHRWFKHRFDGLQLELTK 993
Cdd:TIGR02169 411 LQEELQRLSEELAdlnaaiAGIEAKINELEEEKEDKALEIKK 452
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
135-967 |
3.39e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.74 E-value: 3.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 135 LKDRLNTVQEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKRKM----N 210
Cdd:pfam15921 90 LQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMledsN 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 211 LKIQELRR-QLAQEKYLREsleksASAMLLKIQEMGSaveverKQVHilqqnciaLHDSIQST--QELLAQEQQKKEELE 287
Cdd:pfam15921 170 TQIEQLRKmMLSHEGVLQE-----IRSILVDFEEASG------KKIY--------EHDSMSTMhfRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 288 TATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAylrSKITSLHEASEKAqvlndqLTKKCSElscmlqtvtmek 367
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRI---EQLISEHEVEITG------LTEKASS------------ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 368 ARIIADhqailqveqkmmtqtfqeqnllldaahaSITNELQTVQnektqlqahldhlilehnqciQKAQDAEKRTAVQKE 447
Cdd:pfam15921 290 ARSQAN----------------------------SIQSQLEIIQ---------------------EQARNQNSMYMRQLS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 448 LLESTIARLRGELeasvQEKKSLLEEK-ERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNKLAYE 526
Cdd:pfam15921 321 DLESTVSQLRSEL----REAKRMYEDKiEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLE 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 527 KgklqikvKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALkesQKLKEDLEavedr 606
Cdd:pfam15921 397 K-------EQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAI---QGKNESLE----- 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 607 enkKVGNFQRQLAEAKEDNCKVT-------IMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEA 679
Cdd:pfam15921 462 ---KVSSLTAQLESTKEMLRKVVeeltakkMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKN 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 680 EVDQWQaRMLVMEDQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMT 759
Cdd:pfam15921 539 EGDHLR-NVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKD 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 760 EE-SKVEAELHAERIEALR-KQFQTERETAKKVAQRE----VAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESN 833
Cdd:pfam15921 618 AKiRELEARVSDLELEKVKlVNAGSERLRAVKDIKQErdqlLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKL 697
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 834 KEKIKNQKTQiklhlsakannaqnierMKQIEKELKQMELIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDA 913
Cdd:pfam15921 698 KMQLKSAQSE-----------------LEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNA 760
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....
gi 966929318 914 svrNKQQELCLEAERKIRQELENRCQELEETIRHLKKCKeATENKLKEASVESE 967
Cdd:pfam15921 761 ---NKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLR-SQERRLKEKVANME 810
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
420-961 |
3.45e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.68 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 420 HLDHLILEHNQCIQKAQDAEKRTAVQKELLESTIARLRgELEASVQEKKSLLEEKERFQREVNKTEKEIAQercnLEKEL 499
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREIN-EISSELPELREELEKLEKEVKELEELKEEIEE----LEKEL 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 500 AKNKLAQQKVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQ------TKYAQVKSILE 573
Cdd:PRK03918 248 ESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELReiekrlSRLEEEINGIE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 574 RSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENK------KVGNFQRQLAEAKEDNC-KVTIMLENVLASHSKMQGAL 646
Cdd:PRK03918 328 ERIKELEEKEERLEELKKKLKELEKRLEELEERHELyeeakaKKEELERLKKRLTGLTPeKLEKELEELEKAKEEIEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 647 EKVQIELGRRDSEIAGLKKErdLNQQRVQKLEAEV------DQWQARMLVMEDQHNSEIESLQKALDVAREDNRKLAVSL 720
Cdd:PRK03918 408 SKITARIGELKKEIKELKKA--IEELKKAKGKCPVcgreltEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 721 EQALQTNNHLqTKLDHIQEQLES--KELERQNLETFKDQMTEESKVEAEL------------HAERIEALRKQfQTERET 786
Cdd:PRK03918 486 EKVLKKESEL-IKLKELAEQLKEleEKLKKYNLEELEKKAEEYEKLKEKLiklkgeikslkkELEKLEELKKK-LAELEK 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 787 AKKVAQREVAELKKALDEANFRSV-EVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIE 865
Cdd:PRK03918 564 KLDELEEELAELLKELEELGFESVeELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLE 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 866 KELKQMELIKDQYQKKNYEqslsiqrfvcemtNLQKEMQMLAKSqydasvrnkqqelcLEAERKIRQELENRCQELEETI 945
Cdd:PRK03918 644 ELRKELEELEKKYSEEEYE-------------ELREEYLELSRE--------------LAGLRAELEELEKRREEIKKTL 696
|
570
....*....|....*.
gi 966929318 946 RHLKKCKEATENKLKE 961
Cdd:PRK03918 697 EKLKEELEEREKAKKE 712
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
646-872 |
5.80e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 5.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 646 LEKVQIELGRRDSEIAGLKKERDLNQQR----------------VQKLEAEVDQWQARmLVMEDQHNSEIESLQKALDVA 709
Cdd:COG4913 619 LAELEEELAEAEERLEALEAELDALQERrealqrlaeyswdeidVASAEREIAELEAE-LERLDASSDDLAALEEQLEEL 697
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 710 REDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTE---ESKVEAELHAERIEALRKQFQTERET 786
Cdd:COG4913 698 EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRallEERFAAALGDAVERELRENLEERIDA 777
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 787 AKKVAQREVAELKKALDEAN----FRSVEVSRTNRELRQKLAELEKILESN--------KEKIKNQKTQIKLHLSAK-AN 853
Cdd:COG4913 778 LRARLNRAEEELERAMRAFNrewpAETADLDADLESLPEYLALLDRLEEDGlpeyeerfKELLNENSIEFVADLLSKlRR 857
|
250 260
....*....|....*....|
gi 966929318 854 NAQNI-ERMKQIEKELKQME 872
Cdd:COG4913 858 AIREIkERIDPLNDSLKRIP 877
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
645-834 |
1.13e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 645 ALEKVQIELGRRDSEIAGLKKERDlnQQRVQKLEAEVDQWQARMlvmeDQHNSEIESLQKALDVAREDNRKLAVSLEQA- 723
Cdd:COG4913 263 RYAAARERLAELEYLRAALRLWFA--QRRLELLEAELEELRAEL----ARLEAELERLEARLDALREELDELEAQIRGNg 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 724 LQTNNHLQTKLDHIQEQLESKELERQNLEtfkdQMTEESKVEAELHAERIEALRKQFQTERETAKkvaqREVAELKKALD 803
Cdd:COG4913 337 GDRLEQLEREIERLERELEERERRRARLE----ALLAALGLPLPASAEEFAALRAEAAALLEALE----EELEALEEALA 408
|
170 180 190
....*....|....*....|....*....|.
gi 966929318 804 EAnfrSVEVSRTNRELRQKLAELEkILESNK 834
Cdd:COG4913 409 EA---EAALRDLRRELRELEAEIA-SLERRK 435
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
135-687 |
1.25e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 135 LKDRLNTVQ-EEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKRKMNLKI 213
Cdd:COG1196 218 LKEELKELEaELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 214 QELRRQLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKEELETATSQL 293
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 294 KSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTMEKARIIAD 373
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 374 HQAILQVEQKMMTQTFQEQNLLLDAAHASitNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQKELLESTI 453
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEEL--AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAA 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 454 AR--LRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQqkvEKILGKITESKNKLAYEKGKLQ 531
Cdd:COG1196 536 YEaaLEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAA---ALARGAIGAAVDLVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 532 IKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKV 611
Cdd:COG1196 613 ARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEE 692
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966929318 612 GNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQAR 687
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
149-1013 |
1.42e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 52.67 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 149 DLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLtatleiasktkknAAIVEEELKTTKRKMNLKIQELRRQLAQEKYLRE 228
Cdd:pfam02463 184 NLAELIIDLEELKLQELKLKEQAKKALEYYQLK-------------EKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 229 SLEKSASAMLLKIQEMgsAVEVERKQVHILQQncialhdsIQSTQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLV 308
Cdd:pfam02463 251 EEIESSKQEIEKEEEK--LAQVLKENKEEEKE--------KKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 309 EENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTMEKARIIADHQAILQVEQKMMTQT 388
Cdd:pfam02463 321 KEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 389 FQEQNLLLDAAHASITNELqtvQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQKELLESTIARLRGELEAS-VQEK 467
Cdd:pfam02463 401 SEEEKEAQLLLELARQLED---LLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDlLKET 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 468 KSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNK---LAYEKGKLQIKVKQLEEQVQSF 544
Cdd:pfam02463 478 QLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGdlgVAVENYKVAISTAVIVEVSATA 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 545 TDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEd 624
Cdd:pfam02463 558 DEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTK- 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 625 nckvTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQK 704
Cdd:pfam02463 637 ----LKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEEL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 705 ALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAELHAERIEALRKQFQTER 784
Cdd:pfam02463 713 KKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEK 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 785 ETAKKVAQREVAELKKALDEANFRSVEVsrtNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNA--QNIERMK 862
Cdd:pfam02463 793 EEKLKAQEEELRALEEELKEEAELLEEE---QLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEeeITKEELL 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 863 QIEKELKQMELIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDASVRNKQQELCLEAERKIRQELENRCQELE 942
Cdd:pfam02463 870 QELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKE 949
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966929318 943 ETIRHLKKCKE----ATENKLKEASVESEQITANLEEAHRWFKHRFDGLQLELTKNRLQRPSGEDRWQEKDQDVK 1013
Cdd:pfam02463 950 KEENNKEEEEErnkrLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEFLE 1024
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
199-971 |
1.32e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.35 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 199 EEELKTTKRKMNLKIQELRRQLAQEKYLRES----LEKSASAMLLKIQEMgsavEVERKQVHILQQNcialhdSIQSTQE 274
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKqkfyLRQSVIDLQTKLQEM----QMERDAMADIRRR------ESQSQED 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 275 LLAQEQQKKEELETATSqLKSDLTSRDdliSKLVEENKNLQISFNKEHEEnayLRSKITSLHEASEKAQVLNDQLT---- 350
Cdd:pfam15921 143 LRNQLQNTVHELEAAKC-LKEDMLEDS---NTQIEQLRKMMLSHEGVLQE---IRSILVDFEEASGKKIYEHDSMStmhf 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 351 -KKCSELSCMLQTVTME----KARI--IADHQAILQVEQK----MMTQTFQEQNLLLDAAH----ASITNELQTVQNEKT 415
Cdd:pfam15921 216 rSLGSAISKILRELDTEisylKGRIfpVEDQLEALKSESQnkieLLLQQHQDRIEQLISEHeveiTGLTEKASSARSQAN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 416 QLQAHLDhlILEhnqciQKAQDAEKRTAVQKELLESTIARLRGELeasvQEKKSLLEEK-ERFQREVNKTEKEIAQERCN 494
Cdd:pfam15921 296 SIQSQLE--IIQ-----EQARNQNSMYMRQLSDLESTVSQLRSEL----REAKRMYEDKiEELEKQLVLANSELTEARTE 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 495 LEKELAKNKLAQQKVEKILGKITESKNKLAYEKgklqikvKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILER 574
Cdd:pfam15921 365 RDQFSQESGNLDDQLQKLLADLHKREKELSLEK-------EQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKA 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 575 SKEELSRTVKCRNAALkesQKLKEDLEavedrenkKVGNFQRQLAEAKEdnckvtiMLENVLASHSKMQGALEKVQIELG 654
Cdd:pfam15921 438 MKSECQGQMERQMAAI---QGKNESLE--------KVSSLTAQLESTKE-------MLRKVVEELTAKKMTLESSERTVS 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 655 RRDSEIaglkkerdlnQQRVQKLEAEvdqwqarmlvmedqhNSEIESLQKALDVArednrklavsleqaLQTNNHLQTKL 734
Cdd:pfam15921 500 DLTASL----------QEKERAIEAT---------------NAEITKLRSRVDLK--------------LQELQHLKNEG 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 735 DHIQEQleskeleRQNLETFKDQMTEESKVeAELHAERIEALRKQFQTERETAKKVaQREVAELKKALDEAnfrsvevsr 814
Cdd:pfam15921 541 DHLRNV-------QTECEALKLQMAEKDKV-IEILRQQIENMTQLVGQHGRTAGAM-QVEKAQLEKEINDR--------- 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 815 tnrelRQKLAELEKILESNKEKIKnqktqiklHLSAKANNAQnIERMKQIEKELKQMELIKDQYQKKnyEQSLS-IQRFV 893
Cdd:pfam15921 603 -----RLELQEFKILKDKKDAKIR--------ELEARVSDLE-LEKVKLVNAGSERLRAVKDIKQER--DQLLNeVKTSR 666
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 894 CEMTNLQKEMQMLAKSqydasVRNKQQELCLEAErKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITA 971
Cdd:pfam15921 667 NELNSLSEDYEVLKRN-----FRNKSEEMETTTN-KLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITA 738
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
143-342 |
2.09e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 143 QEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKRKMNLKIQELRRQLA- 221
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEa 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 222 QEKYLRESL-----------------EKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKE 284
Cdd:COG4942 102 QKEELAELLralyrlgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 285 ELETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKA 342
Cdd:COG4942 182 ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
161-896 |
2.14e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 161 RQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKttkrkmnlKIQELRRQLAQEKY--LRESLEKSASAML 238
Cdd:PTZ00121 1170 RKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEER--------KAEEARKAEDAKKAeaVKKAEEAKKDAEE 1241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 239 LKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLVEENKNLQISF 318
Cdd:PTZ00121 1242 AKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAK 1321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 319 NKEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELscmlqtvtmEKARIIADHQAILQVEQKMMTQtfqeqnlllda 398
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA---------EAAEEKAEAAEKKKEEAKKKAD----------- 1381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 399 ahasitnELQTVQNEKtqlqahldhlilehnqciQKAQDAEKRTAVQKELLEstiarlrgELEASVQEKKSLLEEKERFQ 478
Cdd:PTZ00121 1382 -------AAKKKAEEK------------------KKADEAKKKAEEDKKKAD--------ELKKAAAAKKKADEAKKKAE 1428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 479 REVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNklAYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMN 558
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKK--ADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA 1506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 559 KSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENvlas 638
Cdd:PTZ00121 1507 EAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRK---- 1582
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 639 hskmqgALEKVQIELGRRDSEIAGLKKERDLNQQRVQKleAEVDQWQARMLVMEDQHNSEIESLQKaldvAREDNRKLAV 718
Cdd:PTZ00121 1583 ------AEEAKKAEEARIEEVMKLYEEEKKMKAEEAKK--AEEAKIKAEELKKAEEEKKKVEQLKK----KEAEEKKKAE 1650
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 719 SLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAElHAERIEALRKQFQTERETAKKVAQRE---- 794
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE-EAKKAEELKKKEAEEKKKAEELKKAEeenk 1729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 795 --VAELKKALDEANfRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQME 872
Cdd:PTZ00121 1730 ikAEEAKKEAEEDK-KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFA 1808
|
730 740
....*....|....*....|....
gi 966929318 873 LIKDQYQKKNYEQSLSIQRFVCEM 896
Cdd:PTZ00121 1809 NIIEGGKEGNLVINDSKEMEDSAI 1832
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
671-968 |
7.10e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.04 E-value: 7.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 671 QQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQKALDVAREdnRKLAVSLEQALQTNNHlQTKLDHIQEQLESKELERQN 750
Cdd:pfam17380 290 QEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMD--RQAAIYAEQERMAMER-ERELERIRQEERKRELERIR 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 751 LETFKDQMT-----EESKVEAELHAERI----EALRKQFQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRElrq 821
Cdd:pfam17380 367 QEEIAMEISrmrelERLQMERQQKNERVrqelEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEE--- 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 822 KLAELEKILESNKEKiknqktqiklhlsakannAQNIERMKQIEKELKQMELIKDQYQKKNYEQSlSIQRFVCEMTNLQK 901
Cdd:pfam17380 444 RAREMERVRLEEQER------------------QQQVERLRQQEEERKRKKLELEKEKRDRKRAE-EQRRKILEKELEER 504
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966929318 902 EMQMLAKSQ----YDASVRNKQQELCLEAERKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQ 968
Cdd:pfam17380 505 KQAMIEEERkrklLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMERER 575
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
265-606 |
7.73e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 265 LHDSIQSTQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQV 344
Cdd:TIGR02169 679 LRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 345 LNDQLTKKCSELSCMLQTVTMEKARIIAD--HQAILQVEQKMmtQTFQEQNLLLDAAHASITNELQTVQNEKTQLQahld 422
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARlsHSRIPEIQAEL--SKLEEEVSRIEARLREIEQKLNRLTLEKEYLE---- 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 423 hlilehnQCIQKAQDAEKRTAVQKELLESTIARLRGELEasvqEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKn 502
Cdd:TIGR02169 833 -------KEIQELQEQRIDLKEQIKSIEKEIENLNGKKE----ELEEELEELEAALRDLESRLGDLKKERDELEAQLRE- 900
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 503 klAQQKVEKILGKITESKNKLAYEKGKLQikvkQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILER-------- 574
Cdd:TIGR02169 901 --LERKIEELEAQIEKKRKRLSELKAKLE----ALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEiralepvn 974
|
330 340 350
....*....|....*....|....*....|....
gi 966929318 575 --SKEELSRTVKCRNAALKESQKLKEDLEAVEDR 606
Cdd:TIGR02169 975 mlAIQEYEEVLKRLDELKEKRAKLEEERKAILER 1008
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
421-763 |
7.86e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 7.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 421 LDHLILEHNQCIQKAQDAEKRTAVQKELLESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELA 500
Cdd:TIGR02169 644 LEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEK 723
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 501 KNKLAQQKVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVK-SILERSKEEL 579
Cdd:TIGR02169 724 EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAELSKL 803
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 580 SRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSE 659
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR 883
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 660 IAGLKKERD-------LNQQRVQKLEAEVDQWQARMLVME------DQHNSEIES-----------------LQKALDVA 709
Cdd:TIGR02169 884 LGDLKKERDeleaqlrELERKIEELEAQIEKKRKRLSELKaklealEEELSEIEDpkgedeeipeeelsledVQAELQRV 963
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 966929318 710 REDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESK 763
Cdd:TIGR02169 964 EEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
127-945 |
7.95e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 7.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 127 LNPQKTAFLKDRLNTVQEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEvqrltatLEIASKTKKNAAIVEEELKTTK 206
Cdd:pfam02463 234 LNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQ-------EEELKLLAKEEEELKSELLKLE 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 207 RKMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKEEL 286
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 287 ETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTME 366
Cdd:pfam02463 387 SSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELE 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 367 KARIIADHQAILQVEQKMMtqtfQEQNLLLDAAHASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQK 446
Cdd:pfam02463 467 LKKSEDLLKETQLVKLQEQ----LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYK 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 447 ELLESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLekelakNKLAQQKVEKILGKITESKNKLAYE 526
Cdd:pfam02463 543 VAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPL------KSIAVLEIDPILNLAQLDKATLEAD 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 527 KGKLQIKVKQLEEQVQSFTDTslqndHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDR 606
Cdd:pfam02463 617 EDDKRAKVVEGILKDTELTKL-----KESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAK 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 607 ENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQA 686
Cdd:pfam02463 692 EEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSL 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 687 RMLVMEDQHNSEIESLQKALdvaREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEA 766
Cdd:pfam02463 772 KEKELAEEREKTEKLKVEEE---KEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKL 848
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 767 ELHAERIEALRKQFQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKL 846
Cdd:pfam02463 849 EKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAE 928
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 847 HLSAKanNAQNIERMKQIEKELKQMELIKDQYQKKNYEQSLSIQRFvcEMTNLQKEMQMLAKSQYDASVRNKQQELCLEA 926
Cdd:pfam02463 929 ILLKY--EEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEEL--GKVNLMAIEEFEEKEERYNKDELEKERLEEEK 1004
|
810
....*....|....*....
gi 966929318 927 ERKIRQELENRCQELEETI 945
Cdd:pfam02463 1005 KKLIRAIIEETCQRLKEFL 1023
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
394-623 |
8.34e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 8.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 394 LLLDAAHASITNELQTVQNEKTQLQAHLDhlilEHNQCIQKAQDAEKRTAVQKELLESTIARLRGELEASVQEKKSLLEE 473
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQLQQEIA----ELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 474 KERFQREVNKTEKEIAQERCNLEKELAKN-KLAQQKVEKIL---GKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSL 549
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAELLRALyRLGRQPPLALLlspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966929318 550 QNDHLRKMNKSLQTKYAQV---KSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKE 623
Cdd:COG4942 165 LRAELEAERAELEALLAELeeeRAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
593-830 |
1.23e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 46.37 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 593 SQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGA-LEKVQIELGRRD---SEIAGLKKERD 668
Cdd:pfam12128 285 SAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDAdIETAAADQEQLPswqSELENLEERLK 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 669 LNQQRVQKLEAEvdqWQARMLVMEDQHNSEIESLQKALDVAREDNRKLAVSLEQALQT------NNHLQTKLDHIQEQLE 742
Cdd:pfam12128 365 ALTGKHQDVTAK---YNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQAleselrEQLEAGKLEFNEEEYR 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 743 SKE-LERQNLETFKDQMTEESKVEAELHAERIEALRKQfQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQ 821
Cdd:pfam12128 442 LKSrLGELKLRLNQATATPELLLQLENFDERIERAREE-QEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQS 520
|
....*....
gi 966929318 822 KLAELEKIL 830
Cdd:pfam12128 521 ALDELELQL 529
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
120-794 |
1.50e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 120 RLQTEKDLNPQKTAFLKDRLNtVQEEHSKDLKllhlEVMNLRQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVE 199
Cdd:TIGR00618 202 RSQLLTLCTPCMPDTYHERKQ-VLEKELKHLR----EALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 200 EELKTTKRKMNLKIQELRrqLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQE 279
Cdd:TIGR00618 277 AVLEETQERINRARKAAP--LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 280 QQKKEELETATS-------------------QLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASE 340
Cdd:TIGR00618 355 IHIRDAHEVATSireiscqqhtltqhihtlqQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 341 KAQvlnDQLTKKCSELSCMLQTVTMEKARIIADHQAILQVEQKMMT-QTFQEQNLLLDAAHASITNELQTVQNEKTQLQA 419
Cdd:TIGR00618 435 LQQ---RYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTkEQIHLQETRKKAVVLARLLELQEEPCPLCGSCI 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 420 HL-----DHLILEHNQCIQKAQDAEKRTavqkelLESTIARLRGELEASVQEKKSLLEEKERFQrevnKTEKEIAQERCN 494
Cdd:TIGR00618 512 HPnparqDIDNPGPLTRRMQRGEQTYAQ------LETSEEDVYHQLTSERKQRASLKEQMQEIQ----QSFSILTQCDNR 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 495 LEKELAKNKLAQQKVEKILGKITESKNKLAyekGKLQIKVKQLEEQvqsftdtsLQNDHLRKMNKSLQTKYAQVKSILER 574
Cdd:TIGR00618 582 SKEDIPNLQNITVRLQDLTEKLSEAEDMLA---CEQHALLRKLQPE--------QDLQDVRLHLQQCSQELALKLTALHA 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 575 SKEELSRTvKCRNAALKESQKLKEDLEAVEdRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELG 654
Cdd:TIGR00618 651 LQLTLTQE-RVREHALSIRVLPKELLASRQ-LALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASS 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 655 RRDSEIAGlkkERDLNQQRVQKLEAEVDqWQARMLVMEDQHNSE-----IESLQKALDVARED---NRKLAVSLEQALQT 726
Cdd:TIGR00618 729 SLGSDLAA---REDALNQSLKELMHQAR-TVLKARTEAHFNNNEevtaaLQTGAELSHLAAEIqffNRLREEDTHLLKTL 804
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966929318 727 NNHLQTKLDH-IQEQLESKELERQNLETFKDQMTEESKVEAELHAE--RIEALRKQFQTERETAKKVAQRE 794
Cdd:TIGR00618 805 EAEIGQEIPSdEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQllKYEECSKQLAQLTQEQAKIIQLS 875
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
130-975 |
2.37e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 130 QKTAFLK--DRLNTVQEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKr 207
Cdd:TIGR00606 180 SATRYIKalETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIE- 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 208 KMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNcialhdSIQSTQELLAQEQQKKEELE 287
Cdd:TIGR00606 259 HNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQR------TVREKERELVDCQRELEKLN 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 288 TATSQLKSDLTsrddlisKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTME- 366
Cdd:TIGR00606 333 KERRLLNQEKT-------ELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEd 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 367 KARIIADHQAILQVEQKmmtqTFQEQnllLDAAHASITNELQTVQNEKTQLQAhldhlilEHNQCIQKAQDAEKRTAVQK 446
Cdd:TIGR00606 406 EAKTAAQLCADLQSKER----LKQEQ---ADEIRDEKKGLGRTIELKKEILEK-------KQEELKFVIKELQQLEGSSD 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 447 ELLESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNKLAYE 526
Cdd:TIGR00606 472 RILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQI 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 527 KGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQtkyaQVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDR 606
Cdd:TIGR00606 552 RKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEIN----QTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDK 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 607 ---------ENKKVGNFQRQLAEAKED----NCKVTIMLENVLASHSKMQGALE------KVQIELGRRDSEIAGLKKER 667
Cdd:TIGR00606 628 lfdvcgsqdEESDLERLKEEIEKSSKQramlAGATAVYSQFITQLTDENQSCCPvcqrvfQTEAELQEFISDLQSKLRLA 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 668 DLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELE 747
Cdd:TIGR00606 708 PDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVC 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 748 RQNLeTFKDQMTEESKveaelhaeriealrkqfQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELE 827
Cdd:TIGR00606 788 LTDV-TIMERFQMELK-----------------DVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNR 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 828 KILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKqmelikdqyqkknyEQSLSIQRFVCEMTNLQKEMQMLA 907
Cdd:TIGR00606 850 KLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLV--------------ELSTEVQSLIREIKDAKEQDSPLE 915
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966929318 908 KSQYDASVRNKQQELCLEAERKIRQ-ELENRCQELEETIRHLK----KCKEATENKLKEASVESEQITANLEE 975
Cdd:TIGR00606 916 TFLEKDQQEKEELISSKETSNKKAQdKVNDIKEKVKNIHGYMKdienKIQDGKDDYLKQKETELNTVNAQLEE 988
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
698-844 |
3.07e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.19 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 698 EIESLQKALDvarEDNRKLA-----VSLEQalQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEEskvEAELhAER 772
Cdd:PRK09039 47 EISGKDSALD---RLNSQIAeladlLSLER--QGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGA---GAAA-EGR 117
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966929318 773 IEALRKQFQTERETAKKvAQREVAELKKALDeanfrsvevsrtnrELRQKLAELEKILESNKEKIKNQKTQI 844
Cdd:PRK09039 118 AGELAQELDSEKQVSAR-ALAQVELLNQQIA--------------ALRRQLAALEAALDASEKRDRESQAKI 174
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
642-920 |
3.29e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.83 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 642 MQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNS---------EIESLQKALD--VAR 710
Cdd:NF012221 1458 TAGEVIALSFDFARRAGLSTNNGIEVLWNGEVVFASSGDASAWQQKTLKLTAKAGSnrlefkgtgHNDGLGYILDnvVAT 1537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 711 EDNRKLAVSL-EQALQ---TNNHLQTKldhiqeqlESKELERQNLETFKD-QMTEESKVEAELHAERIEALRKQFQTERE 785
Cdd:NF012221 1538 SESSQQADAVsKHAKQddaAQNALADK--------ERAEADRQRLEQEKQqQLAAISGSQSQLESTDQNALETNGQAQRD 1609
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 786 TAKKVAQ---REVAELKKALDEANFRSVEVSRTNRELRQKLAelEKILESNKEKIKNQktqiKLHLSAKANNA--QNIER 860
Cdd:NF012221 1610 AILEESRavtKELTTLAQGLDALDSQATYAGESGDQWRNPFA--GGLLDRVQEQLDDA----KKISGKQLADAkqRHVDN 1683
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966929318 861 MKQIEKELKQME--LIKDQYQKKNYEQSLSIQRFVCEMTNL-----QKEMQMlAKSQYDASVRNKQQ 920
Cdd:NF012221 1684 QQKVKDAVAKSEagVAQGEQNQANAEQDIDDAKADAEKRKDdalakQNEAQQ-AESDANAAANDAQS 1749
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
665-846 |
3.59e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 3.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 665 KERDLNQQRVQKLEAEVDQWQArMLVMEDQHNSEIESLQKALDVAREDNRKL--AVSLEQALQTNNHLQTKLDHIQEQLE 742
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAE-LQEELEELEEELEELEAELEELREELEKLekLLQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 743 SKELERQNLETFKDQMTEESKVEAELHAErIEALRKQFQTERETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQK 822
Cdd:COG4717 150 ELEERLEELRELEEELEELEAELAELQEE-LEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180
....*....|....*....|....
gi 966929318 823 LAELEKILESNKEKIKNQKTQIKL 846
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLL 252
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
124-624 |
3.60e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.83 E-value: 3.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 124 EKDLNPQKTAflKDRLNTVQEEHSKDLKllhlevMNLRQQLRAVKEEedkAQDEVQRLTATLEIAsKTKKNAAIVEEELK 203
Cdd:pfam12128 396 KDKLAKIREA--RDRQLAVAEDDLQALE------SELREQLEAGKLE---FNEEEYRLKSRLGEL-KLRLNQATATPELL 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 204 TTKRKMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSI----QSTQELLAQE 279
Cdd:pfam12128 464 LQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLfpqaGTLLHFLRKE 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 280 QQKKEEleTATSQLKSDLTSRDDLISKLVEENK----NL--------QISFNKEHEENAYLRSKITSLHEASEKAQVLND 347
Cdd:pfam12128 544 APDWEQ--SIGKVISPELLHRTDLDPEVWDGSVggelNLygvkldlkRIDVPEWAASEEELRERLDKAEEALQSAREKQA 621
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 348 QLTKKCSELSCMLQtvtmEKARIIADHQAILQVEQKMMTQTFQEQNLLLDAAHASITNELQTVQNEKTQLQAHLDHLILE 427
Cdd:pfam12128 622 AAEEQLVQANGELE----KASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKK 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 428 HNQCI--QKAQDAEKRTAVQKELLEstiarLRGELEASV-QEKKSLLEEKERFQREVNKTEKEIAqercnleKELAKNKL 504
Cdd:pfam12128 698 HQAWLeeQKEQKREARTEKQAYWQV-----VEGALDAQLaLLKAAIAARRSGAKAELKALETWYK-------RDLASLGV 765
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 505 AQQKVEKILGKITESKNKLAyekgklqiKVKQLEEQVQSFTDtsLQNDHLRKMNKSLQTKYAQVKSILERSKEELSR--- 581
Cdd:pfam12128 766 DPDVIAKLKREIRTLERKIE--------RIAVRRQEVLRYFD--WYQETWLQRRPRLATQLSNIERAISELQQQLARlia 835
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 966929318 582 TVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKED 624
Cdd:pfam12128 836 DTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKED 878
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
198-798 |
3.95e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.67 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 198 VEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKsASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLA 277
Cdd:PRK03918 191 IEELIKEKEKELEEVLREINEISSELPELREELEK-LEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 278 QEQQKKEELETATSQLKSdLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLtkkcSELS 357
Cdd:PRK03918 270 ELKKEIEELEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERL----EELK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 358 CMLQTVTMEKARIIADHQAILQVEQKMmtqtfqeqnllldaahasitNELQTVQNEKTqlqahldhlILEHNQCIQKAQD 437
Cdd:PRK03918 345 KKLKELEKRLEELEERHELYEEAKAKK--------------------EELERLKKRLT---------GLTPEKLEKELEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 438 AEKR-TAVQKELLEstIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERcnlEKEL-AKNKLAQQKVEKILGK 515
Cdd:PRK03918 396 LEKAkEEIEEEISK--ITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEH---RKELlEEYTAELKRIEKELKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 516 ITESKNKLAYEKGKLQIKVKQlEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQK 595
Cdd:PRK03918 471 IEEKERKLRKELRELEKVLKK-ESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 596 LKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQ 675
Cdd:PRK03918 550 KLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELD 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 676 KLEAEVDQWQARMLVMEdqhnSEIESLQKALDVAR-EDNRKLAVSLEQALQTnnhLQTKLDHIQEQLESKElerQNLETF 754
Cdd:PRK03918 630 KAFEELAETEKRLEELR----KELEELEKKYSEEEyEELREEYLELSRELAG---LRAELEELEKRREEIK---KTLEKL 699
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 966929318 755 KDQMTEESKVEAELHA-----ERIEALRKQFQTERETAKKVAQREVAEL 798
Cdd:PRK03918 700 KEELEEREKAKKELEKlekalERVEELREKVKKYKALLKERALSKVGEI 748
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
658-872 |
7.19e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 7.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 658 SEIAGLKKERDLNQQRVQKLEAEVDQWQARmlvmEDQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHI 737
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKE----EKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 738 QEQLESKELERQNLETFKDQMTEESKVEAELHAE------RIEALRKQFQTERETAKKVAQREVAELKKALDEANFRSVE 811
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEdfldavRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966929318 812 VSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQME 872
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
401-984 |
8.19e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 8.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 401 ASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQKEL--LESTIARL----RGELEASVQEKKSLLEEK 474
Cdd:pfam12128 203 VAILEDDGVVPPKSRLNRQQVEHWIRDIQAIAGIMKIRPEFTKLQQEFntLESAELRLshlhFGYKSDETLIASRQEERQ 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 475 ERFQR---EVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITEskNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQN 551
Cdd:pfam12128 283 ETSAElnqLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALED--QHGAFLDADIETAAADQEQLPSWQSELENLE 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 552 DHL----------------RKMNKSLQ--TKYAQVKSILERSKEELSR-TVKCRNAALKESQKLKEDLEAVEDRENKKVG 612
Cdd:pfam12128 361 ERLkaltgkhqdvtakynrRRSKIKEQnnRDIAGIKDKLAKIREARDRqLAVAEDDLQALESELREQLEAGKLEFNEEEY 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 613 NFQRQLAEAKEDNCKVTI---MLENVLASHS---KMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQA 686
Cdd:pfam12128 441 RLKSRLGELKLRLNQATAtpeLLLQLENFDErieRAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQS 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 687 R----MLVMEDQHNSEIESLQKALDVAREDNRKLAvSLEQALQTNNHLQTKLDHIQEQLEskeLERQNLETFKDQMTEES 762
Cdd:pfam12128 521 AldelELQLFPQAGTLLHFLRKEAPDWEQSIGKVI-SPELLHRTDLDPEVWDGSVGGELN---LYGVKLDLKRIDVPEWA 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 763 KVEAELHaERIEALRKQFQTERETAKKvAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKT 842
Cdd:pfam12128 597 ASEEELR-ERLDKAEEALQSAREKQAA-AEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALA 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 843 QIKlhlsakannAQNIERMKQIEKELKQMELIKDQYQKKNYEQSlsiqrfvcemtnLQKEMQMLAKSQYDASVRNKQQEL 922
Cdd:pfam12128 675 ERK---------DSANERLNSLEAQLKQLDKKHQAWLEEQKEQK------------REARTEKQAYWQVVEGALDAQLAL 733
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966929318 923 CLEAERKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITANLEEA----------HRWFKHRF 984
Cdd:pfam12128 734 LKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIavrrqevlryFDWYQETW 805
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
695-1046 |
8.99e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 43.08 E-value: 8.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 695 HNSEIESLQKALDVAREDNrklaVSLEQALQTNNHLQTKLDHIQEQLES----------KELERQNLETFKDQMTEESKV 764
Cdd:NF033838 36 HAEEVRGGNNPTVTSSGNE----SQKEHAKEVESHLEKILSEIQKSLDKrkhtqnvalnKKLSDIKTEYLYELNVLKEKS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 765 EAELHAERIEALRKQF-QTERETAKkvAQREVAELKKALDEA------------------NFRSVEVSRTNRELRQKLAE 825
Cdd:NF033838 112 EAELTSKTKKELDAAFeQFKKDTLE--PGKKVAEATKKVEEAekkakdqkeedrrnyptnTYKTLELEIAESDVEVKKAE 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 826 LEKILESNKEKIKNQK-TQIKLHLSAKANNAQNIERMK----QIEKELKQMELIK-DQYQKKNYEQSLS------IQRFV 893
Cdd:NF033838 190 LELVKEEAKEPRDEEKiKQAKAKVESKKAEATRLEKIKtdreKAEEEAKRRADAKlKEAVEKNVATSEQdkpkrrAKRGV 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 894 CEMTNLQKEMQMLAKSQyDASVRN--------KQQELCLEAERKIrQELENRCQELEETIRhlkkcKEATENKLKEASVE 965
Cdd:NF033838 270 LGEPATPDKKENDAKSS-DSSVGEetlpspslKPEKKVAEAEKKV-EEAKKKAKDQKEEDR-----RNYPTNTYKTLELE 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 966 SEQITANLEEAhrwfkhrfdglQLELTKNRLQRPSGEdrwqEKDQDVKHDVMSNQSVLHRWEKKQNLRpmpKKYHSEVQR 1045
Cdd:NF033838 343 IAESDVKVKEA-----------ELELVKEEAKEPRNE----EKIKQAKAKVESKKAEATRLEKIKTDR---KKAEEEAKR 404
|
.
gi 966929318 1046 K 1046
Cdd:NF033838 405 K 405
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
656-831 |
9.44e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 656 RDSEIAGLKKERDLNQQ--RVQ-KLEAEVDQWQARMLVMEDQhnseieSLQKALDVAREDnrKLAVSLEQALQTNNHLQT 732
Cdd:COG2433 335 RDALAAALKAYDAYKNKfeRVEkKVPPDVDRDEVKARVIRGL------SIEEALEELIEK--ELPEEEPEAEREKEHEER 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 733 KLDHIQEQLESKELERQNLETFKDQMTEE--------SKVEAELHAERIEAlRKQFQTERETAKKvaQREVAELKKALDE 804
Cdd:COG2433 407 ELTEEEEEIRRLEEQVERLEAEVEELEAEleekderiERLERELSEARSEE-RREIRKDREISRL--DREIERLERELEE 483
|
170 180
....*....|....*....|....*..
gi 966929318 805 ANfrsvevsRTNRELRQKLAELEKILE 831
Cdd:COG2433 484 ER-------ERIEELKRKLERLKELWK 503
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
716-922 |
1.08e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 716 LAVSLEQALQTNNHLQTKLDHIQEQLESKElerQNLETFK-DQMTEESKVEAELHAERIEALRKQfQTERETAKKVAQRE 794
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAE---AALEEFRqKNGLVDLSEEAKLLLQQLSELESQ-LAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 795 VAELKKALDEANFRSVEVSRTNR---------ELRQKLAELEKILESN-------KEKIKNQKTQIK-----LHLSAKAN 853
Cdd:COG3206 242 LAALRAQLGSGPDALPELLQSPViqqlraqlaELEAELAELSARYTPNhpdvialRAQIAALRAQLQqeaqrILASLEAE 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 966929318 854 NAQNIERMKQIEKELKQmelikdqyQKKNYEQSLSIQRfvcEMTNLQKEMQmLAKSQYDaSVRNKQQEL 922
Cdd:COG3206 322 LEALQAREASLQAQLAQ--------LEARLAELPELEA---ELRRLEREVE-VARELYE-SLLQRLEEA 377
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
643-800 |
1.24e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 643 QGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLvmeDQHNSEIESLQKALDVAREDNRKLAVSLEQ 722
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIR---GNGGDRLEQLEREIERLERELEERERRRAR 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 723 ALQTNNHLQTKLDHIQEQLESKeleRQNLETFKDQMTEEskvEAELHAERIEALRKQFQTERETAKKvaQREVAELKK 800
Cdd:COG4913 364 LEALLAALGLPLPASAEEFAAL---RAEAAALLEALEEE---LEALEEALAEAEAALRDLRRELREL--EAEIASLER 433
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
502-728 |
1.25e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 502 NKLAQQKVEKILG-KITESKNKLAY---EKGKLQIKVKQLEEQVQSF------TDTSLQNDHLRKMNKSLQTKYAQVKSI 571
Cdd:COG3206 155 NALAEAYLEQNLElRREEARKALEFleeQLPELRKELEEAEAALEEFrqknglVDLSEEAKLLLQQLSELESQLAEARAE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 572 LERSKEELSRTvkcrnaalkESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEdncKVTIMLENVLASHSKMQGALEKVQI 651
Cdd:COG3206 235 LAEAEARLAAL---------RAQLGSGPDALPELLQSPVIQQLRAQLAELEA---ELAELSARYTPNHPDVIALRAQIAA 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 652 ELGRRDSEI----AGLKKERDLNQQRVQKLEAEVDQWQARMLVMeDQHNSEIESLQKALDVARE-----DNRKLAVSLEQ 722
Cdd:COG3206 303 LRAQLQQEAqrilASLEAELEALQAREASLQAQLAQLEARLAEL-PELEAELRRLEREVEVARElyeslLQRLEEARLAE 381
|
....*.
gi 966929318 723 ALQTNN 728
Cdd:COG3206 382 ALTVGN 387
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
414-882 |
1.30e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 414 KTQLQAHLDHLILEhnQCIQKAQDAEKRTAVQKELLESTIARLRGELEASVQEKKSLLEEKERfQREVNKTEKEIAQERC 493
Cdd:COG4717 36 KSTLLAFIRAMLLE--RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEE-LEELEEELEELEAELE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 494 NLEKELAKNKLAQQKVEkILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILE 573
Cdd:COG4717 113 ELREELEKLEKLLQLLP-LYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 574 RSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNC----KVTIMLENVLASHSKMQGALEKV 649
Cdd:COG4717 192 EELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERlkeaRLLLLIAAALLALLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 650 QIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNH 729
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQE 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 730 LQTKLDHIQEQLESKELERQNLETFkdqmteeskveAELHAERIEALRKQFQTERETAKKVAQREVAELKKALDEANFRS 809
Cdd:COG4717 352 LLREAEELEEELQLEELEQEIAALL-----------AEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEE 420
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966929318 810 VEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIklhlsakannAQNIERMKQIEKELKQMELIKDQYQKKN 882
Cdd:COG4717 421 LLEALDEEELEEELEELEEELEELEEELEELREEL----------AELEAELEQLEEDGELAELLQELEELKA 483
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
657-886 |
1.34e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 657 DSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQ-------KALDVAREDNRKLAVSLEQALQTNNH 729
Cdd:pfam17380 338 EQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQmerqqknERVRQELEAARKVKILEEERQRKIQQ 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 730 LQTKLDHIQ-EQLESKELERQNLETFKDQMTEESKVEAELHAERIEALRKQfqtERETAKKVAQREVAELKKALDEANFR 808
Cdd:pfam17380 418 QKVEMEQIRaEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQ---EEERKRKKLELEKEKRDRKRAEEQRR 494
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 809 SVeVSRTNRELRQKLAElekilESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQMELIKDQYQKKNYEQS 886
Cdd:pfam17380 495 KI-LEKELEERKQAMIE-----EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERS 566
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
663-860 |
1.45e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 663 LKKERDLNQQRVQKLEAEVDQWQARMLVM-----EDQHNSEIESLQKALDVAREDNRKLAVSLEQAlqtNNHLQTKLDHI 737
Cdd:COG3206 180 LEEQLPELRKELEEAEAALEEFRQKNGLVdlseeAKLLLQQLSELESQLAEARAELAEAEARLAAL---RAQLGSGPDAL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 738 QEQLESKELE--RQNLETFKDQMTEESKVEAELH------AERIEALRKQFQTER-------ETAKKVAQREVAELKKAL 802
Cdd:COG3206 257 PELLQSPVIQqlRAQLAELEAELAELSARYTPNHpdvialRAQIAALRAQLQQEAqrilaslEAELEALQAREASLQAQL 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 803 DEANFRSVEVSRTNRELRQKLAELEkILESNKEKIKNQKTQIKLHLSAKANNAQNIER 860
Cdd:COG3206 337 AQLEARLAELPELEAELRRLEREVE-VARELYESLLQRLEEARLAEALTVGNVRVIDP 393
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
445-624 |
1.69e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 445 QKELLESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIA---QERCNLEKELAKNKLAQQKVEKILGKITESkn 521
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEalqAEIDKLQAEIAEAEAEIEERREELGERARA-- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 522 klAYEKGKLQIKVKQL--EEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKESQKLKED 599
Cdd:COG3883 95 --LYRSGGSVSYLDVLlgSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180
....*....|....*....|....*
gi 966929318 600 LEAVEDRENKKVGNFQRQLAEAKED 624
Cdd:COG3883 173 LEAQQAEQEALLAQLSAEEAAAEAQ 197
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
712-870 |
1.70e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 712 DNRKLAVSLEQALQTnnhLQTKLDHIQEQLESKELERQNLETFKD-----QMTEESKVEAELHAERIEALRKQFQTERET 786
Cdd:COG4913 607 DNRAKLAALEAELAE---LEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREIAELEAELERLDAS 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 787 AKKVA--QREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKI----KNQKTQIKLHLSAKANNAQNIER 860
Cdd:COG4913 684 SDDLAalEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLeaaeDLARLELRALLEERFAAALGDAV 763
|
170
....*....|
gi 966929318 861 MKQIEKELKQ 870
Cdd:COG4913 764 ERELRENLEE 773
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
454-976 |
1.73e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.73 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 454 ARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAK---------------NKLAQQKVEKIlgKITE 518
Cdd:TIGR01612 536 AKLYKEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDlfdkyleiddeiiyiNKLKLELKEKI--KNIS 613
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 519 SKNklayEKGKLQIKVKQLEEQVQSFTD--TSLQNDHLRKMNKSLQTKYAQVKSILERSKE--------ELSRTVKCRNA 588
Cdd:TIGR01612 614 DKN----EYIKKAIDLKKIIENNNAYIDelAKISPYQVPEHLKNKDKIYSTIKSELSKIYEddidalynELSSIVKENAI 689
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 589 ALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNC--KVTIMLENVLASHSKMQGALEKvqiELGRRDSEIAGLKKE 666
Cdd:TIGR01612 690 DNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIenKKNELLDIIVEIKKHIHGEINK---DLNKILEDFKNKEKE 766
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 667 RDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEI-------ESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQE 739
Cdd:TIGR01612 767 LSNKINDYAKEKDELNKYKSKISEIKNHYNDQInidnikdEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLN 846
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 740 QLES----KELERQNLETFKDQMTE-ESKVEAELHAERIEALRKQFQteretakkvaqrevaELKKALDEANfRSVEVSR 814
Cdd:TIGR01612 847 KVDKfinfENNCKEKIDSEHEQFAElTNKIKAEISDDKLNDYEKKFN---------------DSKSLINEIN-KSIEEEY 910
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 815 TNRELRQKLAELEKILESNKEKIKNqktqiklhlsakANNAQNI--ERMKQIEKELKQMELIKDQYQKKnYEQSLsiqrf 892
Cdd:TIGR01612 911 QNINTLKKVDEYIKICENTKESIEK------------FHNKQNIlkEILNKNIDTIKESNLIEKSYKDK-FDNTL----- 972
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 893 VCEMTNLQKEMQMLAKSQYDAsvrnKQQELCleaeRKIRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITAN 972
Cdd:TIGR01612 973 IDKINELDKAFKDASLNDYEA----KNNELI----KYFNDLKANLGKNKENMLYHQFDEKEKATNDIEQKIEDANKNIPN 1044
|
....
gi 966929318 973 LEEA 976
Cdd:TIGR01612 1045 IEIA 1048
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
269-808 |
2.05e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.04 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 269 IQSTQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQ 348
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKK 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 349 LTKKCSELSCMLQTVTMEKARIIADHQAILQVEQKMMTQTFQEQNL--LLDAAHASITNELQTVQNEKTQLQAHLDH--L 424
Cdd:pfam05557 92 LNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELqeRLDLLKAKASEAEQLRQNLEKQQSSLAEAeqR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 425 ILEHNQCIQK-AQDAEKRTAVQKEL-----LESTIARLRGELE--ASVQEKKSLL-EEKERFQREVNKTEK---EIAQER 492
Cdd:pfam05557 172 IKELEFEIQSqEQDSEIVKNSKSELaripeLEKELERLREHNKhlNENIENKLLLkEEVEDLKRKLEREEKyreEAATLE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 493 CNLEKELAKNKlAQQKVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLqndHLRKMNKSLQTKYAQVKSIL 572
Cdd:pfam05557 252 LEKEKLEQELQ-SWVKLAQDTGLNLRSPEDLSRRIEQLQQREIVLKEENSSLTSSAR---QLEKARRELEQELAQYLKKI 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 573 ERSKEELSRTvkcrNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNcKVTIMLENVLASHSKMQGALEKVQIE 652
Cdd:pfam05557 328 EDLNKKLKRH----KALVRRLQRRVLLLTKERDGYRAILESYDKELTMSNYSP-QLLERIEEAEDMTQKMQAHNEEMEAQ 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 653 LGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVME-DQHNSEIESLQKALDVAREDNRKLAVSLEQA--LQTNNH 729
Cdd:pfam05557 403 LSVAEEELGGYKQQAQTLERELQALRQQESLADPSYSKEEvDSLRRKLETLELERQRLREQKNELEMELERRclQGDYDP 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 730 LQTKLDHIQEQLESKELERqnletfKDQMTEESKVEAELHAERIEAL---RKQFQTERETAKKVAQREVAELKKALDEAN 806
Cdd:pfam05557 483 KKTKVLHLSMNPAAEAYQQ------RKNQLEKLQAEIERLKRLLKKLeddLEQVLRLPETTSTMNFKEVLDLRKELESAE 556
|
..
gi 966929318 807 FR 808
Cdd:pfam05557 557 LK 558
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
161-304 |
2.22e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 161 RQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKT------TKRKMNLK--IQELRRQLAQEKYLRESLEK 232
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAqirgngGDRLEQLEreIERLERELEERERRRARLEA 366
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966929318 233 SASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQ-ELLAQEQQKKEELETATSQLKSdLTSRDDLI 304
Cdd:COG4913 367 LLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALaEAEAALRDLRRELRELEAEIAS-LERRKSNI 438
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
651-832 |
2.34e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 651 IELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARmlvmedqhnseIESLQKALDVAREDNRKLAVSLEQALQTNNHL 730
Cdd:COG1579 10 LDLQELDSELDRLEHRLKELPAELAELEDELAALEAR-----------LEAAKTELEDLEKEIKRLELEIEEVEARIKKY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 731 QTKLDHIQEQLESKELERQnLETFKDQMTEESKVEAELHaERIEALRKQFQTERETAKKvAQREVAELKKALDEanfrsv 810
Cdd:COG1579 79 EEQLGNVRNNKEYEALQKE-IESLKRRISDLEDEILELM-ERIEELEEELAELEAELAE-LEAELEEKKAELDE------ 149
|
170 180
....*....|....*....|..
gi 966929318 811 EVSRTNRELRQKLAELEKILES 832
Cdd:COG1579 150 ELAELEAELEELEAEREELAAK 171
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
137-564 |
2.50e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 137 DRLNTVQEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKRKMNLKIQEL 216
Cdd:PTZ00121 1369 AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 217 RRQLAQEKYLRESLEKSA------------SAMLLKIQEMGSAVEVERKQVHILQQnciALHDSIQSTQELLAQEQQKKE 284
Cdd:PTZ00121 1449 AKKKAEEAKKAEEAKKKAeeakkadeakkkAEEAKKADEAKKKAEEAKKKADEAKK---AAEAKKKADEAKKAEEAKKAD 1525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 285 ELETATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVT 364
Cdd:PTZ00121 1526 EAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 365 MEKA-RIIADHQAILQVEQKMMTQTFQEQNLLLDAAHASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTA 443
Cdd:PTZ00121 1606 KMKAeEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEE 1685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 444 VQKELLESTiaRLRGELEASVQEKKSLLEEKERFQREVNKTEKE--IAQERCNLEKELAKNKLAQQKVEKilgkitESKN 521
Cdd:PTZ00121 1686 DEKKAAEAL--KKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEnkIKAEEAKKEAEEDKKKAEEAKKDE------EEKK 1757
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 966929318 522 KLAYEKGKLQIKVKQLEEQVQSFTDTSL-QNDHLRKMNKSLQTK 564
Cdd:PTZ00121 1758 KIAHLKKEEEKKAEEIRKEKEAVIEEELdEEDEKRRMEVDKKIK 1801
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
95-374 |
3.20e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.64 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 95 KNCEFLVNRMCRLESLIQSLKMNIFRLQTEKDLNPQKTAFLKDRLNTVQEEHSKDLKLLHLEVMNL----RQQLRAV--- 167
Cdd:pfam15921 572 ENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLvnagSERLRAVkdi 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 168 KEEEDKAQDEVQRLTATLEIASKT----KKNAAIVEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQE 243
Cdd:pfam15921 652 KQERDQLLNEVKTSRNELNSLSEDyevlKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMG 731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 244 MGSAVEVERKQVHilqqnciALHDSIQSTQELLAQEQQKKEELETATSQLKSDLTSrddlisklveenknLQISFNKEHE 323
Cdd:pfam15921 732 MQKQITAKRGQID-------ALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELST--------------VATEKNKMAG 790
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 966929318 324 ENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTMEKARIIADH 374
Cdd:pfam15921 791 ELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLKLQH 841
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
137-683 |
3.22e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.63 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 137 DRLNTVQEEHSKDLKLLHLEVMNLRQQlraVKEEEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKRKMNLKIQEL 216
Cdd:pfam05483 222 EKIQHLEEEYKKEINDKEKQVSLLLIQ---ITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKEL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 217 -------RRQLAQEKYLRESLEKSASAMLLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKEELETA 289
Cdd:pfam05483 299 edikmslQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQ 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 290 TSQLKSDLTSRDDLISKLVEENKNLQIsfnkEHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELSCMLQTVTMEKAR 369
Cdd:pfam05483 379 LKIITMELQKKSSELEEMTKFKNNKEV----ELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHD 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 370 IIADHQAILQVEQKMMTQTfqeqnllldaahASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQD------------ 437
Cdd:pfam05483 455 LEIQLTAIKTSEEHYLKEV------------EDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDmtlelkkhqedi 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 438 -----AEKRTAVQKELLESTIARLRGELEASvqeKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKi 512
Cdd:pfam05483 523 inckkQEERMLKQIENLEEKEMNLRDELESV---REEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNN- 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 513 LGKITESKNKLAYE--------KGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVK 584
Cdd:pfam05483 599 LKKQIENKNKNIEElhqenkalKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 585 CRNAALKESQKLKEDleaVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLA----SHSKMQGALEKVQIELGRRDSEI 660
Cdd:pfam05483 679 KAKAIADEAVKLQKE---IDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGlyknKEQEQSSAKAALEIELSNIKAEL 755
|
570 580
....*....|....*....|...
gi 966929318 661 AGLKKERDLNQQRVQKLEAEVDQ 683
Cdd:pfam05483 756 LSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
449-811 |
3.23e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 449 LESTIARLRGELEasvqeKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITES-KNKLAYEK 527
Cdd:PLN02939 75 LENTSLRTVMELP-----QKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAeKNILLLNQ 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 528 GKLQikvkQLEEQVQSFTDtslqNDHLRKMNKSLQTKYAQVKSILERSKEELSRTvkcrnaALKESQ--KLKEDLEAVED 605
Cdd:PLN02939 150 ARLQ----ALEDLEKILTE----KEALQGKINILEMRLSETDARIKLAAQEKIHV------EILEEQleKLRNELLIRGA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 606 RENKKVGNFQRQLAEAKEDNckvtIMLENVLAshskmqgALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQ 685
Cdd:PLN02939 216 TEGLCVHSLSKELDVLKEEN----MLLKDDIQ-------FLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQ 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 686 ARMLVME----DQHNSEIESLQKALDVAREDNRKLAVSLEQalqtNNHLQTKLDHIQEQLESKelerqnletfkdQMTEE 761
Cdd:PLN02939 285 EDVSKLSplqyDCWWEKVENLQDLLDRATNQVEKAALVLDQ----NQDLRDKVDKLEASLKEA------------NVSKF 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 966929318 762 SKVEAELHAERIEALRKQFQT---ERETAKKVAQREVAE----LKKALDEANFRSVE 811
Cdd:PLN02939 349 SSYKVELLQQKLKLLEERLQAsdhEIHSYIQLYQESIKEfqdtLSKLKEESKKRSLE 405
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
454-688 |
3.43e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 454 ARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNKLAYEKGKLQIK 533
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 534 VKQLEEQVQSFTDTSLQNDHLRKMNKSLQTKYAqvkSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGN 613
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDF---LDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966929318 614 FQRQLAEAKEDnckvtimLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARM 688
Cdd:COG4942 176 LEALLAELEEE-------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
732-830 |
3.87e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 732 TKLDHIQEQLESKELERQNLETFKDQMTEE--SKVEAELHA--ERIEALRKQFQTEREtakkvAQREVAELKKALDEANF 807
Cdd:COG0542 411 EELDELERRLEQLEIEKEALKKEQDEASFErlAELRDELAEleEELEALKARWEAEKE-----LIEEIQELKEELEQRYG 485
|
90 100
....*....|....*....|...
gi 966929318 808 RSVEVSRTNRELRQKLAELEKIL 830
Cdd:COG0542 486 KIPELEKELAELEEELAELAPLL 508
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
494-950 |
4.24e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.19 E-value: 4.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 494 NLEKELAKNKLAQQK----VEKILGKITESKNKLayekgKLQiKVKQLEEQVQSFTDtslqndHLRKMNKSLQTKYAQVK 569
Cdd:TIGR01612 1322 DIKKELQKNLLDAQKhnsdINLYLNEIANIYNIL-----KLN-KIKKIIDEVKEYTK------EIEENNKNIKDELDKSE 1389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 570 SILERSKEELS-RTVKCRNAALKESQKLKEDLEAVEDREN---KKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGA 645
Cdd:TIGR01612 1390 KLIKKIKDDINlEECKSKIESTLDDKDIDECIKKIKELKNhilSEESNIDTYFKNADENNENVLLLFKNIEMADNKSQHI 1469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 646 LeKVQIELGRRDSEI------------AGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNS---------------- 697
Cdd:TIGR01612 1470 L-KIKKDNATNDHDFninelkehidksKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSAlaiknkfaktkkdsei 1548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 698 ---EIESLQKALDVAREDN-------RKLAVSLEQALQTNNHLQTKLDHIQ---EQLESKELERQNLET-FKDQMTEESK 763
Cdd:TIGR01612 1549 iikEIKDAHKKFILEAEKSeqkikeiKKEKFRIEDDAAKNDKSNKAAIDIQlslENFENKFLKISDIKKkINDCLKETES 1628
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 764 VEAELHAERIEALRKQFQTERETAK---------KVAQREVAELKKALDEAN--FRSVEVSRTNRELRQKLAELEKILE- 831
Cdd:TIGR01612 1629 IEKKISSFSIDSQDTELKENGDNLNslqefleslKDQKKNIEDKKKELDELDseIEKIEIDVDQHKKNYEIGIIEKIKEi 1708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 832 --SNKEKIKNQKTQIK-----LHLSAKANNAQNIERMKQIEKELKQMELIKDQYQKknyeqSLSIqrfvceMTNLQKEM- 903
Cdd:TIGR01612 1709 aiANKEEIESIKELIEptienLISSFNTNDLEGIDPNEKLEEYNTEIGDIYEEFIE-----LYNI------IAGCLETVs 1777
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 966929318 904 -QMLAKSQYDASVRNKQQELC--LEAERKIRQELEN-RCQELEETIRHLKK 950
Cdd:TIGR01612 1778 kEPITYDEIKNTRINAQNEFLkiIEIEKKSKSYLDDiEAKEFDRIINHFKK 1828
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
459-584 |
4.51e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 4.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 459 ELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNKLAYEKGKLQIKVKQLE 538
Cdd:PRK12704 48 KKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELE 127
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 966929318 539 EQVQSFTDtsLQNDHLRKMNKSLQTKYAQVKSIL-----ERSKEELSRTVK 584
Cdd:PRK12704 128 KKEEELEE--LIEEQLQELERISGLTAEEAKEILlekveEEARHEAAVLIK 176
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
156-343 |
4.78e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 156 EVMNLRQQLRAVKEEEDKAQDEVQRLTATLEiasKTKKNAAIVEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKSAS 235
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELE---ELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 236 AM----------------------LLKIQEMGSAVEVERKQVHILQQNCIALHDSIQSTQELLAQEQQKKEELETATSQL 293
Cdd:COG3883 94 ALyrsggsvsyldvllgsesfsdfLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 966929318 294 KSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSKITSLHEASEKAQ 343
Cdd:COG3883 174 EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
550-885 |
4.78e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 40.77 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 550 QNDHLRKMNKSLQTKYAQVKSIL-ERSKEELSRTVKCRNAALKEsqKLKEDLEAVEdrenKKVGNFQRQLAEA--KEDNC 626
Cdd:NF033838 85 QNVALNKKLSDIKTEYLYELNVLkEKSEAELTSKTKKELDAAFE--QFKKDTLEPG----KKVAEATKKVEEAekKAKDQ 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 627 KVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEdqhnsEIESLQKal 706
Cdd:NF033838 159 KEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRDEEKIKQAKAKVESKKAEATRLE-----KIKTDRE-- 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 707 DVAREDNRKLAVSLEQALQTN--NHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAELHAERIEALRKQFQTER 784
Cdd:NF033838 232 KAEEEAKRRADAKLKEAVEKNvaTSEQDKPKRRAKRGVLGEPATPDKKENDAKSSDSSVGEETLPSPSLKPEKKVAEAEK 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 785 --ETAKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILES-----NKEKIKNQKTQIKLHLsAKANNAQN 857
Cdd:NF033838 312 kvEEAKKKAKDQKEEDRRNYPTNTYKTLELEIAESDVKVKEAELELVKEEakeprNEEKIKQAKAKVESKK-AEATRLEK 390
|
330 340
....*....|....*....|....*....
gi 966929318 858 IER-MKQIEKELKQMELIKDQYQKKNYEQ 885
Cdd:NF033838 391 IKTdRKKAEEEAKRKAAEEDKVKEKPAEQ 419
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
787-1001 |
5.57e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 5.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 787 AKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEK 866
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 867 ELKQM--ELIKDQYQKKNY---------EQSLSIQRFVCEMTNLQKEMQMLAKSQYDASVRNKQQELCLEAERKIRQELE 935
Cdd:COG4942 101 AQKEElaELLRALYRLGRQpplalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966929318 936 NRCQELEETIRHLKKCKEATENKLKEASVESEQITANLEEAHRWFKHRFDGLQLELTKNRLQRPSG 1001
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
693-918 |
6.57e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 693 DQHNSEIESLQKALDVAREDNRKLAVSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDQMTEESKVEAELHAER 772
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 773 IEALRKQFQTERETAKkVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKA 852
Cdd:COG4942 110 LRALYRLGRQPPLALL-LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERA 188
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966929318 853 NNAQNIERMKQIEKELKQMELIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDASVRNK 918
Cdd:COG4942 189 ALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
170-551 |
7.46e-03 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 40.13 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 170 EEDKAQDEVQRLTATLEIASKTKKNAAIVEEELKTTKRKMNLKIQElrrqlAQEKYLRESLEKSASAMLLKIQEMGSAVE 249
Cdd:pfam09731 83 KEEKKQVKIPRQSGVSSEVAEEEKEATKDAAEAKAQLPKSEQEKEK-----ALEEVLKEAISKAESATAVAKEAKDDAIQ 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 250 VERKQVHILQQNCIALHDSIQS--TQELLAQEQQKKEELETATSQLKSDLTSRDDLISKLVEENKNL--QISFNKEHEEN 325
Cdd:pfam09731 158 AVKAHTDSLKEASDTAEISREKatDSALQKAEALAEKLKEVINLAKQSEEEAAPPLLDAAPETPPKLpeHLDNVEEKVEK 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 326 AY-LRSKITSLHEASEKA-QVLNDQLTKKCSELSCMLQTVTMEKAriiadhqailqveqkmmtqtfQEQNLLLDAAHASI 403
Cdd:pfam09731 238 AQsLAKLVDQYKELVASErIVFQQELVSIFPDIIPVLKEDNLLSN---------------------DDLNSLIAHAHREI 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 404 TNELQTVQNEKTQLQAHLDHLILEhnQCIQKAQDAEKRTAVQKELLESTIARLRGELEASVQEKKSLLEEKERFQREvnk 483
Cdd:pfam09731 297 DQLSKKLAELKKREEKHIERALEK--QKEELDKLAEELSARLEEVRAADEAQLRLEFEREREEIRESYEEKLRTELE--- 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966929318 484 TEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESKNKLAYEKGKLQIKVKQLEEQVQSFTDTSLQN 551
Cdd:pfam09731 372 RQAEAHEEHLKDVLVEQEIELQREFLQDIKEKVEEERAGRLLKLNELLANLKGLEKATSSHSEVEDEN 439
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
296-976 |
7.93e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 40.45 E-value: 7.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 296 DLTSRDDLISKLVEENKNLQISFNK-----EHEENAYLRSKITSLHEASEKAQVLNDQLTKKCSELscMLQTVT-MEKAR 369
Cdd:COG5022 804 SLLGSRKEYRSYLACIIKLQKTIKRekklrETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETI--YLQSAQrVELAE 881
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 370 iiaDHQAILQVEQKMMTQTFQeQNLLLDAAHASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQKELL 449
Cdd:COG5022 882 ---RQLQELKIDVKSISSLKL-VNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELN 957
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 450 -----ESTIARLRGELEASVQEKKSLLEEKERFQREVNKTEKEIAQERCNLEKELAKNKLAQQKVEKILGKITESK---- 520
Cdd:COG5022 958 klhevESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKiiss 1037
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 521 --------NKLAYEKGKLQIKVKQLEEQVQsftdtSLQNDHLRKMNKSLQTKYAQVKSILERSKEELSRTVKCRNAALKE 592
Cdd:COG5022 1038 estelsilKPLQKLKGLLLLENNQLQARYK-----ALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPA 1112
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 593 -------SQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIElgRRDSEIAGLKK 665
Cdd:COG5022 1113 nvlqfivAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALSE--KRLYQSALYDE 1190
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 666 ERDLNQQRVQKLEAEVDQwqarmlvMEDQHNSEIESLQKALDVAREDNrkLAVSLEQALQTNNHLQTKLDHIQEqlESKE 745
Cdd:COG5022 1191 KSKLSSSEVNDLKNELIA-------LFSKIFSGWPRGDKLKKLISEGW--VPTEYSTSLKGFNNLNKKFDTPAS--MSNE 1259
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 746 LERQNLETFkDQMTEESKVEAELHAERIEALRK-----QFQTERETAKKVAQREVAELKK--ALDEANFRSVEVSRTNRE 818
Cdd:COG5022 1260 KLLSLLNSI-DNLLSSYKLEEEVLPATINSLLQyinvgLFNALRTKASSLRWKSATEVNYnsEELDDWCREFEISDVDEE 1338
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 819 LrQKLAELEKILESNKekiknqktqiklhlsakaNNAQNIERMKQIEKELKQMEL--IKDQYQKKNYEqslsiqrfvcem 896
Cdd:COG5022 1339 L-EELIQAVKVLQLLK------------------DDLNKLDELLDACYSLNPAEIqnLKSRYDPADKE------------ 1387
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966929318 897 TNLQKEMQmlakSQYDASVRNKQQELCLEAERKIRQELENRCQElEETIRHLKKCKEATENKLKEASVESEQITANLEEA 976
Cdd:COG5022 1388 NNLPKEIL----KKIEALLIKQELQLSLEGKDETEVHLSEIFSE-EKSLISLDRNSIYKEEVLSSLSALLTKEKIALLDR 1462
|
|
| |
