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Conserved domains on  [gi|1622897077|ref|XP_014979332|]
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cation channel sperm-associated protein subunit gamma isoform X1 [Macaca mulatta]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CATSPERG super family cl20936
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ...
189-1160 0e+00

Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.


The actual alignment was detected with superfamily member pfam15064:

Pssm-ID: 464479  Cd Length: 971  Bit Score: 1740.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  189 MFPAGPRWPRVRVLQVLWALLAVLLASRRLWAIKDFEECTWQVVLNEFKRVGENGASDRFFEQELVDTVGNLFHMLVDSP 268
Cdd:pfam15064    1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  269 IDPREKYLGFPYYLKINYSCEEKHSEDLVRMGHLTGLKPVVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSKEPCIAEEVC 348
Cdd:pfam15064   81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  349 SMSWYTPMPIKNGSVVMRVDVSSNGLGTFIPDKRFQVNINGFLKRNQDNDIQFTVGDELFNLMPQYFVGISSRPLWHTVD 428
Cdd:pfam15064  161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  429 QSPVLILGGIPNEKYVLMTDTSFKDFSLVELSIDSCWVGSFYCPQSGFTATIYDTVATESTLFIRQNQLVYYFTGTYTTL 508
Cdd:pfam15064  241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  509 YERNRGSGSWVRVLASECIKKLCPVYFHSNGSEYIMALTTGKHEGFVHFGTIRDGQVSFEMLPREWSVCEQIGVTTCSII 588
Cdd:pfam15064  321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITDGLVSFEMLPRGWSVCEKIPVKNCSIT 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  589 WSDYIAGEYTLLLLVESEYENASKRFQVVSYNTANDDLELLYHIPEFIPEARGLEFLMILGTESYTNTVMTPKGISCNPY 668
Cdd:pfam15064  401 WATYIADDYNLLLLVEIDHNTSGQYFLVVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  669 NHLIFIWGNFLLQSSNKENFIYLADFPKELSIKYMTRSFRGAVAIVTETEEIWYLLEGTYRVYRLFPSKGWKVHISLQLM 748
Cdd:pfam15064  481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  749 QQSSLYASNETMLTLFYEGSKLYQLVYLMNNQKGQLVKRLMPVEQLLMYQQHtSHYDLDRKGGYLMLSFTNFCPFSVMRL 828
Cdd:pfam15064  561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLP-KPYTVENQGSHLTLSFTNTCPFTAMHL 639
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  829 RNLPGPQRYTRQERYRARPPHVLERSGFHNENSLAIYQGLIYYLLWLHSVYDKPYADPVHDPTWRWWEKNKQDQDYYFFL 908
Cdd:pfam15064  640 QDLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYL 719
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  909 ASNWRSAGGVFIEMDSYEKIYNLKSAYELPERIFLDKGTEYSFAIFLSAQSRSFRTMADLGTVFELHSHVDVGVVLADPG 988
Cdd:pfam15064  720 ASNWLSAGGVHIDMNSYEKIYNLSGEYGLPERIFLDKGTWYTFSVFLTARGDTFTSSDSQGATIQVDSKVDLAVVLADPE 799
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  989 CIEASVKQEVLINRNAVLFSITLKDKKVCYDQGISGHHLMKSSMTVNVVGSSGLCFQETHAGARMQGNLMVPVFIGCPPG 1068
Cdd:pfam15064  800 CLEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPG 879
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077 1069 KRLAFDITYTLEYSRLKNKHYFDCVQVDPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDTLKDYNK 1148
Cdd:pfam15064  880 KRLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTE 959
                          970
                   ....*....|..
gi 1622897077 1149 DEIYRFNSPLDK 1160
Cdd:pfam15064  960 EEIYRFNSPLDT 971
PRK12678 super family cl36163
transcription termination factor Rho; Provisional
40-156 1.28e-04

transcription termination factor Rho; Provisional


The actual alignment was detected with superfamily member PRK12678:

Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 46.44  E-value: 1.28e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   40 EETTKGKERSRGEETVFIEKGQGEEEgRDQRAGRGEGPVLEEpiAENPGKGRVHKDQVEKQGRGRERKQSEEQALGKKQE 119
Cdd:PRK12678   128 RERRERGEAARRGAARKAGEGGEQPA-TEARADAAERTEEEE--RDERRRRGDREDRQAEAERGERGRREERGRDGDDRD 204
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1622897077  120 PGRKQEQGPGREQG----RGQEQGRGREQEQGRGPERGKTR 156
Cdd:PRK12678   205 RRDRREQGDRREERgrrdGGDRRGRRRRRDRRDARGDDNRE 245
 
Name Accession Description Interval E-value
CATSPERG pfam15064
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ...
189-1160 0e+00

Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.


Pssm-ID: 464479  Cd Length: 971  Bit Score: 1740.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  189 MFPAGPRWPRVRVLQVLWALLAVLLASRRLWAIKDFEECTWQVVLNEFKRVGENGASDRFFEQELVDTVGNLFHMLVDSP 268
Cdd:pfam15064    1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  269 IDPREKYLGFPYYLKINYSCEEKHSEDLVRMGHLTGLKPVVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSKEPCIAEEVC 348
Cdd:pfam15064   81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  349 SMSWYTPMPIKNGSVVMRVDVSSNGLGTFIPDKRFQVNINGFLKRNQDNDIQFTVGDELFNLMPQYFVGISSRPLWHTVD 428
Cdd:pfam15064  161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  429 QSPVLILGGIPNEKYVLMTDTSFKDFSLVELSIDSCWVGSFYCPQSGFTATIYDTVATESTLFIRQNQLVYYFTGTYTTL 508
Cdd:pfam15064  241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  509 YERNRGSGSWVRVLASECIKKLCPVYFHSNGSEYIMALTTGKHEGFVHFGTIRDGQVSFEMLPREWSVCEQIGVTTCSII 588
Cdd:pfam15064  321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITDGLVSFEMLPRGWSVCEKIPVKNCSIT 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  589 WSDYIAGEYTLLLLVESEYENASKRFQVVSYNTANDDLELLYHIPEFIPEARGLEFLMILGTESYTNTVMTPKGISCNPY 668
Cdd:pfam15064  401 WATYIADDYNLLLLVEIDHNTSGQYFLVVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  669 NHLIFIWGNFLLQSSNKENFIYLADFPKELSIKYMTRSFRGAVAIVTETEEIWYLLEGTYRVYRLFPSKGWKVHISLQLM 748
Cdd:pfam15064  481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  749 QQSSLYASNETMLTLFYEGSKLYQLVYLMNNQKGQLVKRLMPVEQLLMYQQHtSHYDLDRKGGYLMLSFTNFCPFSVMRL 828
Cdd:pfam15064  561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLP-KPYTVENQGSHLTLSFTNTCPFTAMHL 639
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  829 RNLPGPQRYTRQERYRARPPHVLERSGFHNENSLAIYQGLIYYLLWLHSVYDKPYADPVHDPTWRWWEKNKQDQDYYFFL 908
Cdd:pfam15064  640 QDLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYL 719
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  909 ASNWRSAGGVFIEMDSYEKIYNLKSAYELPERIFLDKGTEYSFAIFLSAQSRSFRTMADLGTVFELHSHVDVGVVLADPG 988
Cdd:pfam15064  720 ASNWLSAGGVHIDMNSYEKIYNLSGEYGLPERIFLDKGTWYTFSVFLTARGDTFTSSDSQGATIQVDSKVDLAVVLADPE 799
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  989 CIEASVKQEVLINRNAVLFSITLKDKKVCYDQGISGHHLMKSSMTVNVVGSSGLCFQETHAGARMQGNLMVPVFIGCPPG 1068
Cdd:pfam15064  800 CLEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPG 879
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077 1069 KRLAFDITYTLEYSRLKNKHYFDCVQVDPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDTLKDYNK 1148
Cdd:pfam15064  880 KRLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTE 959
                          970
                   ....*....|..
gi 1622897077 1149 DEIYRFNSPLDK 1160
Cdd:pfam15064  960 EEIYRFNSPLDT 971
PRK12678 PRK12678
transcription termination factor Rho; Provisional
40-156 1.28e-04

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 46.44  E-value: 1.28e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   40 EETTKGKERSRGEETVFIEKGQGEEEgRDQRAGRGEGPVLEEpiAENPGKGRVHKDQVEKQGRGRERKQSEEQALGKKQE 119
Cdd:PRK12678   128 RERRERGEAARRGAARKAGEGGEQPA-TEARADAAERTEEEE--RDERRRRGDREDRQAEAERGERGRREERGRDGDDRD 204
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1622897077  120 PGRKQEQGPGREQG----RGQEQGRGREQEQGRGPERGKTR 156
Cdd:PRK12678   205 RRDRREQGDRREERgrrdGGDRRGRRRRRDRRDARGDDNRE 245
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
39-145 3.44e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 41.90  E-value: 3.44e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   39 GEETTKGKERSRGEeTVFIEKGQGEEEGRDQ-RAGRGEGPVLEEPIAENPG---KGRVHKDQVEKQGRGRERKQSEEQAL 114
Cdd:TIGR00927  671 GETETKGENESEGE-IPAERKGEQEGEGEIEaKEADHKGETEAEEVEHEGEteaEGTEDEGEIETGEEGEEVEDEGEGEA 749
                           90       100       110
                   ....*....|....*....|....*....|.
gi 1622897077  115 GKKQEPGRKQEQGPGREQGRGQEQGRGREQE 145
Cdd:TIGR00927  750 EGKHEVETEGDRKETEHEGETEAEGKEDEDE 780
 
Name Accession Description Interval E-value
CATSPERG pfam15064
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ...
189-1160 0e+00

Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.


Pssm-ID: 464479  Cd Length: 971  Bit Score: 1740.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  189 MFPAGPRWPRVRVLQVLWALLAVLLASRRLWAIKDFEECTWQVVLNEFKRVGENGASDRFFEQELVDTVGNLFHMLVDSP 268
Cdd:pfam15064    1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  269 IDPREKYLGFPYYLKINYSCEEKHSEDLVRMGHLTGLKPVVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSKEPCIAEEVC 348
Cdd:pfam15064   81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  349 SMSWYTPMPIKNGSVVMRVDVSSNGLGTFIPDKRFQVNINGFLKRNQDNDIQFTVGDELFNLMPQYFVGISSRPLWHTVD 428
Cdd:pfam15064  161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  429 QSPVLILGGIPNEKYVLMTDTSFKDFSLVELSIDSCWVGSFYCPQSGFTATIYDTVATESTLFIRQNQLVYYFTGTYTTL 508
Cdd:pfam15064  241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  509 YERNRGSGSWVRVLASECIKKLCPVYFHSNGSEYIMALTTGKHEGFVHFGTIRDGQVSFEMLPREWSVCEQIGVTTCSII 588
Cdd:pfam15064  321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITDGLVSFEMLPRGWSVCEKIPVKNCSIT 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  589 WSDYIAGEYTLLLLVESEYENASKRFQVVSYNTANDDLELLYHIPEFIPEARGLEFLMILGTESYTNTVMTPKGISCNPY 668
Cdd:pfam15064  401 WATYIADDYNLLLLVEIDHNTSGQYFLVVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  669 NHLIFIWGNFLLQSSNKENFIYLADFPKELSIKYMTRSFRGAVAIVTETEEIWYLLEGTYRVYRLFPSKGWKVHISLQLM 748
Cdd:pfam15064  481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  749 QQSSLYASNETMLTLFYEGSKLYQLVYLMNNQKGQLVKRLMPVEQLLMYQQHtSHYDLDRKGGYLMLSFTNFCPFSVMRL 828
Cdd:pfam15064  561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLP-KPYTVENQGSHLTLSFTNTCPFTAMHL 639
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  829 RNLPGPQRYTRQERYRARPPHVLERSGFHNENSLAIYQGLIYYLLWLHSVYDKPYADPVHDPTWRWWEKNKQDQDYYFFL 908
Cdd:pfam15064  640 QDLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYL 719
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  909 ASNWRSAGGVFIEMDSYEKIYNLKSAYELPERIFLDKGTEYSFAIFLSAQSRSFRTMADLGTVFELHSHVDVGVVLADPG 988
Cdd:pfam15064  720 ASNWLSAGGVHIDMNSYEKIYNLSGEYGLPERIFLDKGTWYTFSVFLTARGDTFTSSDSQGATIQVDSKVDLAVVLADPE 799
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077  989 CIEASVKQEVLINRNAVLFSITLKDKKVCYDQGISGHHLMKSSMTVNVVGSSGLCFQETHAGARMQGNLMVPVFIGCPPG 1068
Cdd:pfam15064  800 CLEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPG 879
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077 1069 KRLAFDITYTLEYSRLKNKHYFDCVQVDPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDTLKDYNK 1148
Cdd:pfam15064  880 KRLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTE 959
                          970
                   ....*....|..
gi 1622897077 1149 DEIYRFNSPLDK 1160
Cdd:pfam15064  960 EEIYRFNSPLDT 971
PRK12678 PRK12678
transcription termination factor Rho; Provisional
40-156 1.28e-04

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 46.44  E-value: 1.28e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   40 EETTKGKERSRGEETVFIEKGQGEEEgRDQRAGRGEGPVLEEpiAENPGKGRVHKDQVEKQGRGRERKQSEEQALGKKQE 119
Cdd:PRK12678   128 RERRERGEAARRGAARKAGEGGEQPA-TEARADAAERTEEEE--RDERRRRGDREDRQAEAERGERGRREERGRDGDDRD 204
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1622897077  120 PGRKQEQGPGREQG----RGQEQGRGREQEQGRGPERGKTR 156
Cdd:PRK12678   205 RRDRREQGDRREERgrrdGGDRRGRRRRRDRRDARGDDNRE 245
PRK12678 PRK12678
transcription termination factor Rho; Provisional
39-153 1.89e-03

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 42.58  E-value: 1.89e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   39 GEETTKGKERSRGEETVFIEKGQGEEEGRDQRAGRGEGPVLEEPIAENPGKGRVHKDQVEKQGRGRERKQSEEQALGKKQ 118
Cdd:PRK12678   164 TEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARGDDN 243
                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1622897077  119 EPGRKQEQGPGREQGRGQEQGRGREQEQGRGPERG 153
Cdd:PRK12678   244 REDRGDRDGDDGEGRGGRRGRRFRDRDRRGRRGGD 278
PTZ00121 PTZ00121
MAEBL; Provisional
34-151 2.88e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.44  E-value: 2.88e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   34 KEKVWGEETTKGKERSRGEETVFIEKGQGEEEGRDQRAGRGEgpvlEEPIAENPGKGRVHKDQVEKQGRGRERKQSEEQA 113
Cdd:PTZ00121  1543 EEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAE----EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA 1618
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1622897077  114 LGKKQEPGRKQEQGPGREQGRGQEQGRGREQEQGRGPE 151
Cdd:PTZ00121  1619 KIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE 1656
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
39-145 3.44e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 41.90  E-value: 3.44e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   39 GEETTKGKERSRGEeTVFIEKGQGEEEGRDQ-RAGRGEGPVLEEPIAENPG---KGRVHKDQVEKQGRGRERKQSEEQAL 114
Cdd:TIGR00927  671 GETETKGENESEGE-IPAERKGEQEGEGEIEaKEADHKGETEAEEVEHEGEteaEGTEDEGEIETGEEGEEVEDEGEGEA 749
                           90       100       110
                   ....*....|....*....|....*....|.
gi 1622897077  115 GKKQEPGRKQEQGPGREQGRGQEQGRGREQE 145
Cdd:TIGR00927  750 EGKHEVETEGDRKETEHEGETEAEGKEDEDE 780
PRK12678 PRK12678
transcription termination factor Rho; Provisional
24-154 5.48e-03

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 41.04  E-value: 5.48e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622897077   24 VPAKKLGPAWKEKVWGEETTKGKERSRGEETVFIEKGQGEEEgRDQRAGRGEGPVLEEPIAENPGKGRVHKDqvEKQGRG 103
Cdd:PRK12678    64 AAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAA-PAARAAAAAAAEAASAPEAAQARERRERG--EAARRG 140
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622897077  104 RERKQSEEQALGKKQEPGRKQEQGPGREQG-------RGQEQGRGREQEQGRGPERGK 154
Cdd:PRK12678   141 AARKAGEGGEQPATEARADAAERTEEEERDerrrrgdREDRQAEAERGERGRREERGR 198
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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