|
Name |
Accession |
Description |
Interval |
E-value |
| HkD_NuMA |
cd22224 |
Hook domain found in nuclear mitotic apparatus protein (NuMA) and similar proteins; NuMA, also ... |
6-152 |
7.09e-58 |
|
Hook domain found in nuclear mitotic apparatus protein (NuMA) and similar proteins; NuMA, also called nuclear mitotic apparatus protein 1, or nuclear matrix protein-22 (NMP-22), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of the spindle poles, and the alignment and segregation of chromosomes during mitotic cell division. The model corresponds to the N-terminal conserved globular Hook domain of NuMA, which folds as a variant of the helical calponin homology (CH) domain. It directly binds dynein light intermediate chains LIC1 and LIC2 through a conserved hydrophobic patch shared among other Hook adaptors.
Pssm-ID: 411795 Cd Length: 148 Bit Score: 197.02 E-value: 7.09e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 6 TRGAALLSWVNSLHVADPVEAVLQLQDCSIFIKIIDRLHGTEEGQQILQQPVPERLDFVCSFLQKNQKHPSSPECLVSAQ 85
Cdd:cd22224 2 TKAEALLSWVNSLKLDDPIESISQLQDGTILLKIIYKLKGEEEEEQILDLSVEERLEFISSFLEGDCRFNSSQGTLVSWQ 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 86 KVLEG--SELELAKMTMLLLYHSTMSSKSPrdWEQFEYKIQAELAVILKFVLDHEDGLNLNEDLENFLR 152
Cdd:cd22224 82 KILQGenLELELAKVLLLLLYHSMMNNNLT--LEKLDYKTELELASILRFVLDNEDGLYLSEGLDKFLT 148
|
|
| NuMA_LGNBD |
cd22298 |
LGN binding domain (LGNBD) of nuclear mitotic apparatus protein (NuMA) and similar proteins; ... |
1856-1914 |
1.24e-26 |
|
LGN binding domain (LGNBD) of nuclear mitotic apparatus protein (NuMA) and similar proteins; NuMA, also called nuclear matrix protein-22 (NMP-22), nuclear mitotic apparatus protein 1 (NUMA1), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of spindle poles and the alignment and segregation of chromosomes during mitotic cell division. It is involved in the establishment of mitotic spindle orientation during metaphase, and elongation during anaphase in a dynein-dynactin-dependent manner. NuMA, in complex with LGN, forms NuMA:LGN hetero-hexamers that promote spindle orientation. The model corresponds to the LGN binding domain (LGNBD) of NuMA. LGN (named for leu-gly-asn repeats) is also known as G protein signaling modulator 2.
Pssm-ID: 412093 Cd Length: 56 Bit Score: 104.22 E-value: 1.24e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 1856 LLSLPGYRPTTRSSARRSQagvSSGAPPGRNSFYMGTCQDEPEQLDDWNRIAELQQRNR 1914
Cdd:cd22298 1 LLSLPGYRPSTRSSTRRSQ---SSSATGGRSTFYMGTCQDEPEHLDDWNRIAELQQRNR 56
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
560-1200 |
1.24e-25 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 116.19 E-value: 1.24e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 560 LKQKEQQLKEVAEKQEVTRRdhAQQLATAAEEREASLRerdaalqqlealekekAAKLEILQQQLQVANETRDSAQTSVT 639
Cdd:COG1196 195 LGELERQLEPLERQAEKAER--YRELKEELKELEAELL----------------LLKLRELEAELEELEAELEELEAELE 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 640 QAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQkatEKERVAQEKDQLQEQLQALKESLKVTKGSLE 719
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ---DIARLEERRRELEERLEELEEELAELEEELE 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 720 EEKRRAADALEEQQrcisELKAETRSLVEQHKQEQKELEEEKAGRkglearlqqlgEAHQAETEALRQELAEAIAAQRTA 799
Cdd:COG1196 334 ELEEELEELEEELE----EAEEELEEAEAELAEAEEALLEAEAEL-----------AEAEEELEELAEELLEALRAAAEL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 800 ESECEQLVKEVAAWRERYEESQQEEAQYgamfQEQLMTLKEECEKARQELQEAKEKVAGIEShSELQISRQQNELVELHA 879
Cdd:COG1196 399 AAQLEELEEAEEALLERLERLEEELEEL----EEALAELEEEEEEEEEALEEAAEEEAELEE-EEEALLELLAELLEEAA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 880 NLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDREPEwLEEQQGRQ 959
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL-AAALQNIV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 960 FCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNALN 1039
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1040 EQRVEFA-TLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASgsgaqseaagrtept 1118
Cdd:COG1196 633 EAALRRAvTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE--------------- 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1119 gpKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTK 1198
Cdd:COG1196 698 --ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLERE 775
|
..
gi 1622865026 1199 VQ 1200
Cdd:COG1196 776 IE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
549-1326 |
1.30e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 116.31 E-value: 1.30e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 549 LRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKA---AKLEILQQQLQ 625
Cdd:TIGR02168 198 LERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQeleEKLEELRLEVS 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 626 VANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEfqlQSEQQKATEKERVAQEKDQLQEQLQ 705
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE---SKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 706 ALKESLKvtkgSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLgeahQAETEAL 785
Cdd:TIGR02168 355 SLEAELE----ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERL----QQEIEEL 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 786 RQELAEAiaAQRTAESECEQLVKEVAAWRERYEEsqqeeaqygamFQEQLMTLKEECEKARQELQEAKEKVAGIESHSEL 865
Cdd:TIGR02168 427 LKKLEEA--ELKELQAELEELEEELEELQEELER-----------LEEALEELREELEEAEQALDAAERELAQLQARLDS 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 866 QISRQQNelvelHANLARALQQVQEKevrAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVK------ 939
Cdd:TIGR02168 494 LERLQEN-----LEGFSEGVKALLKN---QSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKkaiafl 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 940 EPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELE----RLRAAL------------MESQGQQQEERGQQE 1003
Cdd:TIGR02168 566 KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVkfdpKLRKALsyllggvlvvddLDNALELAKKLRPGY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1004 REV--------------------ARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKD 1063
Cdd:TIGR02168 646 RIVtldgdlvrpggvitggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1064 QELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQA 1143
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1144 DSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERK 1223
Cdd:TIGR02168 806 DELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASL 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1224 NSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEK 1303
Cdd:TIGR02168 886 EEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIED 965
|
810 820
....*....|....*....|...
gi 1622865026 1304 QrvaSENLRQELTSQAERAEELG 1326
Cdd:TIGR02168 966 D---EEEARRRLKRLENKIKELG 985
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
209-891 |
1.76e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 115.92 E-value: 1.76e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 209 LQTPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRL-ALLNEKQAASPLEPRELEELRDKNES 287
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALaNEISRLEQQKQILRERLANLERQLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 288 LTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEH---SRATQEWLEKQAQLEK 364
Cdd:TIGR02168 321 LEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLetlRSKVAQLELQIASLNN 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 365 ELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEkgevlgdvlQLETLKQEAATLAANNTQLQARVETLEteqg 444
Cdd:TIGR02168 401 EIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQA---------ELEELEEELEELQEELERLEEALEELR---- 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 445 QQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQ----AKEELEQASQAHGAR-LTAQVASLTSEL-----TTLNATI 514
Cdd:TIGR02168 468 EELEEAEQALDAAERELAQLQARLDSLERLQENLEGfsegVKALLKNQSGLSGILgVLSELISVDEGYeaaieAALGGRL 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 515 QQ---QDQELADLKQQAKEEQAQLAQT----LQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQE------------ 575
Cdd:TIGR02168 548 QAvvvENLNAAKKAIAFLKQNELGRVTflplDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllggvlv 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 576 VTRRDHAQQLAT------------------------AAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETR 631
Cdd:TIGR02168 628 VDDLDNALELAKklrpgyrivtldgdlvrpggvitgGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKEL 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 632 DSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKAT------------------EKERV 693
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEeleerleeaeeelaeaeaEIEEL 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 694 AQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEaRLQQ 773
Cdd:TIGR02168 788 EAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE-ELEE 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 774 LGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQygamFQEQLMTLKEECEKARQELQEAK 853
Cdd:TIGR02168 867 LIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEE----LREKLAQLELRLEGLEVRIDNLQ 942
|
730 740 750
....*....|....*....|....*....|....*...
gi 1622865026 854 EKVAGIESHSELQISRQQNELVELHANLARALQQVQEK 891
Cdd:TIGR02168 943 ERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENK 980
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
563-1331 |
2.43e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 115.15 E-value: 2.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 563 KEQQLKEVAEKQEVTRRDHAQQLATAAEEREASL----RERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSV 638
Cdd:TIGR02168 169 KYKERRKETERKLERTRENLDRLEDILNELERQLksleRQAEKAERYKELKAELRELELALLVLRLEELREELEELQEEL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 639 TQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQkatEKERVAQEKDQLQEQLQALKESLKVTKGSL 718
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALAN---EISRLEQQKQILRERLANLERQLEELEAQL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 719 EEEKRRaadaLEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLgeahQAETEALRQELAEAIAAQRT 798
Cdd:TIGR02168 326 EELESK----LDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEEL----EEQLETLRSKVAQLELQIAS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 799 AESECEQLVKEVAAWRERYEESQQEEAQYGAMFQE-QLMTLKEECEKARQELQEAKEKVAGIEShselQISRQQNELVEL 877
Cdd:TIGR02168 398 LNNEIERLEARLERLEDRRERLQQEIEELLKKLEEaELKELQAELEELEEELEELQEELERLEE----ALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 878 HANLARALQQVQEKEVRA---QKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASR-ELVKEPARAGDREPEWLE 953
Cdd:TIGR02168 474 EQALDAAERELAQLQARLdslERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyEAAIEAALGGRLQAVVVE 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 954 eqqgrqfcSTQAALQAMEREAEQmgnelERLRAALMEsqGQQQEERGQQEREVARLTQERGRAQADLALEKAAkAELEMR 1033
Cdd:TIGR02168 554 --------NLNAAKKAIAFLKQN-----ELGRVTFLP--LDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFD-PKLRKA 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1034 LQNALNEQRVeFATLQEALAHALTEKEG-----KDQELVKLRGLEA-----------AQIKELEELRQTMKQLKEQLAKK 1097
Cdd:TIGR02168 618 LSYLLGGVLV-VDDLDNALELAKKLRPGyrivtLDGDLVRPGGVITggsaktnssilERRREIEELEEKIEELEEKIAEL 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1098 EKEHASGSGAQSE-------AAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQ 1170
Cdd:TIGR02168 697 EKALAELRKELEEleeeleqLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEE 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1171 LEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKE 1250
Cdd:TIGR02168 777 LAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIES 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1251 LKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLReEAEKQRVASENLRQELTSQAERAEELGQELK 1330
Cdd:TIGR02168 857 LAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELR-ELESKRSELRRELEELREKLAQLELRLEGLE 935
|
.
gi 1622865026 1331 A 1331
Cdd:TIGR02168 936 V 936
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
219-937 |
2.20e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 108.99 E-value: 2.20e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 219 LKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALlnekqaaspleprELEELRDKNESLTMRLHETLKQ 298
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRL-------------EVSELEEEIEELQKELYALANE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 299 CQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEhsraTQEWLEKQAQLEKELSTALQDKKCLEE 378
Cdd:TIGR02168 297 ISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEK----LEELKEELESLEAELEELEAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 379 KNEILQGKLSQLEEHLALLRENPPQEKGevlgdvlQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERdhFE 458
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLELQIASLNN-------EIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE--LE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 459 EEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGArLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQT 538
Cdd:TIGR02168 444 ELEEELEELQEELERLEEALEELREELEEAEQALDA-AERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGIL 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 539 LQQQEQAS--QGLRHQVEQ-LSSSL-----KQKEQQLKEVA--EKQEVTRR-----DHAQQLATAAEEREASLRERDAAL 603
Cdd:TIGR02168 523 GVLSELISvdEGYEAAIEAaLGGRLqavvvENLNAAKKAIAflKQNELGRVtflplDSIKGTEIQGNDREILKNIEGFLG 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 604 QQLEALEKEKAAKLEI------------LQQQLQVANETRD------------SAQTSVTQAQREKA----ELSQKVEEL 655
Cdd:TIGR02168 603 VAKDLVKFDPKLRKALsyllggvlvvddLDNALELAKKLRPgyrivtldgdlvRPGGVITGGSAKTNssilERRREIEEL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 656 RARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLkvtkgslEEEKRRAADALEEQQRC 735
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARL-------EAEVEQLEERIAQLSKE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 736 ISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQelaeaiaaqrtAESECEQLVKEVAAWRE 815
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDE-----------LRAELTLLNEEAANLRE 824
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 816 RYEESQQEeaqygamfqeqlmtlKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRA 895
Cdd:TIGR02168 825 RLESLERR---------------IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 1622865026 896 QKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASREL 937
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRL 931
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
471-1095 |
2.38e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 108.49 E-value: 2.38e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 471 LQSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqtlqqqeqasqgLR 550
Cdd:COG1196 227 AELLLLKLRELEAELEELEAEL-EELEAELEELEAELAELEAELEELRLELEELELELEE------------------AQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 551 HQVEQLSSSLKQKEQQLKEVAEKQevtrrdhaQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANET 630
Cdd:COG1196 288 AEEYELLAELARLEQDIARLEERR--------RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 631 RDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEfqlQSEQQKATEKERVAQEKDQLQEQLQALKES 710
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELE---EAEEALLERLERLEEELEELEEALAELEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 711 LKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELA 790
Cdd:COG1196 437 EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 791 EAIAAQrtaesecEQLVKEVAAWRERYEESQQEEAqyGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQ 870
Cdd:COG1196 517 AGLRGL-------AGAVAVLIGVEAAYEAALEAAL--AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAA 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 871 QNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAgdrepe 950
Cdd:COG1196 588 LAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS------ 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 951 wleeqqgrqfcSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAEL 1030
Cdd:COG1196 662 -----------LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQL 730
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622865026 1031 EMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEA----------AQIKELEELRQTMKQLKEQLA 1095
Cdd:COG1196 731 EAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEReiealgpvnlLAIEEYEELEERYDFLSEQRE 805
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1075-1642 |
1.65e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 105.79 E-value: 1.65e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1075 AQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERsleaER 1154
Cdd:COG1196 229 LLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ----DI 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1155 ASRAERDSALETLQGQLEEKARELghsQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEV 1234
Cdd:COG1196 305 ARLEERRRELEERLEELEEELAEL---EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1235 SILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQrvasENLRQE 1314
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE----AELEEE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1315 LTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGG 1394
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYE 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1395 LRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASyAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQARE 1474
Cdd:COG1196 538 AALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT-FLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYY 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1475 KYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQ 1554
Cdd:COG1196 617 VLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELE 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1555 QQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAkkqqNQELQEQLQSLEHLQKENKEL 1634
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE----ALEELPEPPDLEELERELERL 772
|
....*...
gi 1622865026 1635 RAEAERLG 1642
Cdd:COG1196 773 EREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
458-1275 |
9.83e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 103.60 E-value: 9.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 458 EEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaq 537
Cdd:TIGR02168 221 ELRELELALLVLRLEELREELEELQEELKEAEEEL-EELTAELQELEEKLEELRLEVSELEEEIEELQKELYA------- 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 538 tlqqQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVT--RRDHAQQLATAAEEREASLRERdaaLQQLEALEKEKAA 615
Cdd:TIGR02168 293 ----LANEISRLEQQKQILRERLANLERQLEELEAQLEELesKLDELAEELAELEEKLEELKEE---LESLEAELEELEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 616 KLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKAT--EKERV 693
Cdd:TIGR02168 366 ELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELqaELEEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 694 AQEKDQLQEQLQALKESLKVTKGSLEEeKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQ 773
Cdd:TIGR02168 446 EEELEELQEELERLEEALEELREELEE-AEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGV 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 774 LGEAHQAEtEALRQELAEAIAAQRTAeseceQLVKEVAAWRERYEeSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAK 853
Cdd:TIGR02168 525 LSELISVD-EGYEAAIEAALGGRLQA-----VVVENLNAAKKAIA-FLKQNELGRVTFLPLDSIKGTEIQGNDREILKNI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 854 EKVAGIeshselqISRQQNELVELHANLARALQQVqekevraqKLADDLSTLQEKmaatSKEVARLETLVRKAGEQ---- 929
Cdd:TIGR02168 598 EGFLGV-------AKDLVKFDPKLRKALSYLLGGV--------LVVDDLDNALEL----AKKLRPGYRIVTLDGDLvrpg 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 930 ----QETASRELVKEPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALMEsqgqQQEERGQQERE 1005
Cdd:TIGR02168 659 gvitGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEE----LSRQISALRKD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1006 VARLTQERGRAQADLALEKAAKAELEmrlqnalneqrvefatlqealahalTEKEGKDQELVKLRGLEAAQIKELEELRQ 1085
Cdd:TIGR02168 735 LARLEAEVEQLEERIAQLSKELTELE-------------------------AEIEELEERLEEAEEELAEAEAEIEELEA 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1086 TMKQLKEQLAKKEKEHASGSGAQSEaagrtepTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALE 1165
Cdd:TIGR02168 790 QIEQLKEELKALREALDELRAELTL-------LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1166 TLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKE 1245
Cdd:TIGR02168 863 ELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQ 942
|
810 820 830
....*....|....*....|....*....|....*...
gi 1622865026 1246 GESKELKRLVMAESEK--------SQKLEDRLRLLQAE 1275
Cdd:TIGR02168 943 ERLSEEYSLTLEEAEAlenkieddEEEARRRLKRLENK 980
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
215-774 |
2.04e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 102.32 E-value: 2.04e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALlnekqaaspleprELEELRDKNESLTMRLHE 294
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELEL-------------ELEEAQAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 295 TLKQCQDLKTEKSQMDRKISQLLEEngdlsfkLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLEKELSTALQDkk 374
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEE-------LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEA-- 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 375 cLEEKNEILQGKLSQLEEHLALLRenppqekgEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAER 454
Cdd:COG1196 371 -EAELAEAEEELEELAEELLEALR--------AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 455 DHFEEEKQQLSSLIANLQSSISNLSQAKEELEQAsQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQ 534
Cdd:COG1196 442 EALEEAAEEEAELEEEEEALLELLAELLEEAALL-EAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 535 -------------LAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEvAEKQEVTRRDHAQQLATAAEEREASLRERDA 601
Cdd:COG1196 521 glagavavligveAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKA-AKAGRATFLPLDKIRARAALAAALARGAIGA 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 602 ALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQ 681
Cdd:COG1196 600 AVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEA 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 682 SEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEK 761
Cdd:COG1196 680 ELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP 759
|
570
....*....|...
gi 1622865026 762 AGRKGLEARLQQL 774
Cdd:COG1196 760 PDLEELERELERL 772
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1150-1685 |
7.22e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.40 E-value: 7.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1150 LEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISS 1229
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1230 LEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETAsnsaRAAERSSALREEVQSLREEAEKQRVASE 1309
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELA----EAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1310 NLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSK 1389
Cdd:COG1196 390 EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELL 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1390 QAAGGLRAELLRAQRELGELIPlRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRG-------LGERANLGR 1462
Cdd:COG1196 470 EEAALLEAALAELLEELAEAAA-RLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVeaayeaaLEAALAAAL 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1463 QFLEVELDQAREKYVQELAAVRADAETRL---AEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEE 1539
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLKAAKAGRATFLpldKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1540 LRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQE 1619
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 1620 QLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQ-------VRSLEAQVAHADQQLRDLGK 1685
Cdd:COG1196 709 LAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEelpeppdLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1078-1641 |
9.16e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.01 E-value: 9.16e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1078 KELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAagrteptgpKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASR 1157
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEELEA---------ELEELEAELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1158 AERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSIL 1237
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1238 NRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTS 1317
Cdd:COG1196 371 EAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1318 QAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRA 1397
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1398 ---ELLRAQRELGELIPLRQKVAEQERTAQQ----LRAEKASYAE--QLSMLKKAHGLLAEENRGLGERANLGRQFLEVE 1468
Cdd:COG1196 531 gveAAYEAALEAALAAALQNIVVEDDEVAAAaieyLKAAKAGRATflPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1469 LDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSD 1548
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1549 QASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQS----- 1623
Cdd:COG1196 691 EELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELerele 770
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1622865026 1624 --------------------------LEHLQKENKELRAEAERL 1641
Cdd:COG1196 771 rlereiealgpvnllaieeyeeleerYDFLSEQREDLEEARETL 814
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
525-1365 |
2.60e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 98.99 E-value: 2.60e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 525 KQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQ 604
Cdd:TIGR02169 172 KEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 605 QLEALEK---EKAAKLEILQQQL-QVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQL 680
Cdd:TIGR02169 252 ELEKLTEeisELEKRLEEIEQLLeELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEI 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 681 QSEQQKATEKER----VAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQ---QRCISELKAETRSLVEQHKQE 753
Cdd:TIGR02169 332 DKLLAEIEELEReieeERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELkdyREKLEKLKREINELKRELDRL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 754 QKELEEEKAGRKGLEARLQQLgEAHQAETEALRQELAEAIAAQrtaESECEQLVKEVAAWRERYEESQQEEAQYgamfQE 833
Cdd:TIGR02169 412 QEELQRLSEELADLNAAIAGI-EAKINELEEEKEDKALEIKKQ---EWKLEQLAADLSKYEQELYDLKEEYDRV----EK 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 834 QLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELvelhaNLARALQQVQEK-----EVRAQKLADDLSTLQEK 908
Cdd:TIGR02169 484 ELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVH-----GTVAQLGSVGERyataiEVAAGNRLNNVVVEDDA 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 909 MAATSKEVARletlVRKAGE------QQETASRELVKEPARAG---------DREPEWleEQQGRQFCSTQAALQAMERE 973
Cdd:TIGR02169 559 VAKEAIELLK----RRKAGRatflplNKMRDERRDLSILSEDGvigfavdlvEFDPKY--EPAFKYVFGDTLVVEDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 974 AEQMGN-ELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEmRLQNALNEQRVEFATLQEAL 1052
Cdd:TIGR02169 633 RRLMGKyRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELS-SLQSELRRIENRLDELSQEL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1053 AHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEhasgsgaQSEAAGRTEPTGPKLEALRAEVSKL 1132
Cdd:TIGR02169 712 SDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE-------LKELEARIEELEEDLHKLEEALNDL 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1133 EQQCQQQQEqaDSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQ 1212
Cdd:TIGR02169 785 EARLSHSRI--PEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGK 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1213 VARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALRE 1292
Cdd:TIGR02169 863 KEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGE 942
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 1293 EVQSLREEAEKQRVASEnlRQELTSQAERAEELG----QELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKH 1365
Cdd:TIGR02169 943 DEEIPEEELSLEDVQAE--LQRVEEEIRALEPVNmlaiQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
783-1585 |
3.08e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 98.59 E-value: 3.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 783 EALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQygamfqeqlmtLKEECEKARQELQEAKEKVAGIESh 862
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSE-----------LEEEIEELQKELYALANEISRLEQ- 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 863 selQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRelvkepa 942
Cdd:TIGR02168 303 ---QKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES------- 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 943 RAGDREPEWLEEqqgrqfcstQAALQAMEREAEQMGNELERLRAALmesqgqqqeerGQQEREVARLTQErgRAQADLAL 1022
Cdd:TIGR02168 373 RLEELEEQLETL---------RSKVAQLELQIASLNNEIERLEARL-----------ERLEDRRERLQQE--IEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1023 EKAAKAELEMRlqnaLNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHA 1102
Cdd:TIGR02168 431 EEAELKELQAE----LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSE 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1103 SGSGAQSEAAGRTEPTGPKLE--------------ALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETlq 1168
Cdd:TIGR02168 507 GVKALLKNQSGLSGILGVLSElisvdegyeaaieaALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGT-- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1169 gQLEEKARELGHSQSALASVQRELAALRTKVQdhsKAEDEWKAQV--------ARGRQEAERKNSLISSLEEEVsILNRQ 1240
Cdd:TIGR02168 585 -EIQGNDREILKNIEGFLGVAKDLVKFDPKLR---KALSYLLGGVlvvddldnALELAKKLRPGYRIVTLDGDL-VRPGG 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1241 VLEKEGESKELKRLvmaesEKSQKLEDrLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAE 1320
Cdd:TIGR02168 660 VITGGSAKTNSSIL-----ERRREIEE-LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1321 RAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELL 1400
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1401 RAQRELGELIP----LRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHG----LLAEENRGLGERANLgRQFLEVELDQA 1472
Cdd:TIGR02168 814 LLNEEAANLRErlesLERRIAATERRLEDLEEQIEELSEDIESLAAEIEeleeLIEELESELEALLNE-RASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1473 REKYvQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASK 1552
Cdd:TIGR02168 893 RSEL-EELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEAR 971
|
810 820 830
....*....|....*....|....*....|....*..
gi 1622865026 1553 VQQQKLKAVQAQGG----ESQQEAQRLQARLNELQAQ 1585
Cdd:TIGR02168 972 RRLKRLENKIKELGpvnlAAIEEYEELKERYDFLTAQ 1008
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
964-1542 |
6.18e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 97.31 E-value: 6.18e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 964 QAALQAMEREAEQMGNELERLRAALmesqgqqqeerGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRV 1043
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAEL-----------AELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1044 EfatlQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLE 1123
Cdd:COG1196 307 L----EERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1124 ALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHS 1203
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1204 KAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEK---SQKLEDRLRLLQAETASNS 1280
Cdd:COG1196 463 ELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglaGAVAVLIGVEAAYEAALEA 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1281 ARAAERSSALREEVQSLREEAE--KQRVASENLRQELTSQAERAEELGQELKAWQEKFF-------QKEQALSTLQLEHT 1351
Cdd:COG1196 543 ALAAALQNIVVEDDEVAAAAIEylKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVdlvasdlREADARYYVLGDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1352 STQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKA 1431
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1432 SYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMtak 1511
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL--- 779
|
570 580 590
....*....|....*....|....*....|..
gi 1622865026 1512 yeGA-KVKVLEERQRFQEEKQKLTAQVEELRK 1542
Cdd:COG1196 780 --GPvNLLAIEEYEELEERYDFLSEQREDLEE 809
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1007-1586 |
1.30e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 96.54 E-value: 1.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1007 ARLTQERGRAQADLALEKAAKAELEMR-LQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQ 1085
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAeLEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1086 TMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALE 1165
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1166 TLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQvlEKE 1245
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE--AAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1246 GESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRV--------ASENLRQELTS 1317
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAyeaaleaaLAAALQNIVVE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1318 QAERAEELGQELKAwqekffQKEQALSTLQLEHTSTQALVSELLpakhlcqqlqaeqaaaekRHREELEQSKQAAGGLRA 1397
Cdd:COG1196 555 DDEVAAAAIEYLKA------AKAGRATFLPLDKIRARAALAAAL------------------ARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1398 ELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLsmLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYV 1477
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT--LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERL 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1478 QELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQK 1557
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
570 580 590
....*....|....*....|....*....|....*.
gi 1622865026 1558 LKAVQAQGGE-------SQQEAQRLQARLNELQAQL 1586
Cdd:COG1196 769 LERLEREIEAlgpvnllAIEEYEELEERYDFLSEQR 804
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
631-1328 |
1.37e-19 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 96.75 E-value: 1.37e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 631 RDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEkDQLQEQLQALKES 710
Cdd:PTZ00121 1085 EDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAED-AKRVEIARKAEDA 1163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 711 LKVtkgsleEEKRRAADA--LEEQQRCISELKAETRSLVEQhkqeqkeLEEEKAGRKGLEARlqQLGEAHQAETEALRQE 788
Cdd:PTZ00121 1164 RKA------EEARKAEDAkkAEAARKAEEVRKAEELRKAED-------ARKAEAARKAEEER--KAEEARKAEDAKKAEA 1228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 789 LAEAIAAQRTAESeceqlVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKArQELQEAKEKvagiESHSELQIS 868
Cdd:PTZ00121 1229 VKKAEEAKKDAEE-----AKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA-DELKKAEEK----KKADEAKKA 1298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 869 RQQNELVELH--ANLARALQQVQEKEVRAQKLADDLSTLQE---KMAATSKEVARLETLVRKAGEQQETASRELVKEPAR 943
Cdd:PTZ00121 1299 EEKKKADEAKkkAEEAKKADEAKKKAEEAKKKADAAKKKAEeakKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 944 AGDREPEWLEEQQGRQFCSTQAalqameREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRaQADLALE 1023
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKA------EEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK-KADEAKK 1451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1024 KAAKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQI----KELEELRQTMKQLKEQLAKKEK 1099
Cdd:PTZ00121 1452 KAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAaeakKKADEAKKAEEAKKADEAKKAE 1531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1100 EHASGSGAQSEAAGRTEPTGPKLEALRA--EVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARE 1177
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEE 1611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1178 LGHSQSAlasvqrelaalRTKVQDHSKAEDEWKAQVARGRQEAE--RKNSLISSLEEEVSILNRQVLEKEGESKELKRLV 1255
Cdd:PTZ00121 1612 AKKAEEA-----------KIKAEELKKAEEEKKKVEQLKKKEAEekKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 1256 MAESEKSQKLEDRLRLlQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQE 1328
Cdd:PTZ00121 1681 KKAEEDEKKAAEALKK-EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD 1752
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
276-860 |
7.55e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.85 E-value: 7.55e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 276 RELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRAT--- 352
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEerr 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 353 QEWLEKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENppqekgevlgdvlqletLKQEAATLAANNTQL 432
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE-----------------LAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 433 QARVETLETEQgQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNA 512
Cdd:COG1196 375 AEAEEELEELA-EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 513 TIQQQDQELADLKQQAKEEQaqlaqtlqqqeqasqglrhQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEER 592
Cdd:COG1196 454 LEEEEEALLELLAELLEEAA-------------------LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 593 EASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQ 672
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 673 VAELEF--QLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEqqrcISELKAETRSLVEQH 750
Cdd:COG1196 595 GAIGAAvdLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEG----GSAGGSLTGGSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 751 KQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAM 830
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
570 580 590
....*....|....*....|....*....|
gi 1622865026 831 FQEQLMTLKEECEKARQELQEAKEKVAGIE 860
Cdd:COG1196 751 EALEELPEPPDLEELERELERLEREIEALG 780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
517-1313 |
9.07e-19 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 94.05 E-value: 9.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 517 QDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASL 596
Cdd:PTZ00121 1077 KDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 597 -RERDAALQQLEALEKEKAAKLEILQQQLQV--ANETRDSAQTSVTQAQReKAELSQKVEELRaRVETACREQHEAQAQv 673
Cdd:PTZ00121 1157 aRKAEDARKAEEARKAEDAKKAEAARKAEEVrkAEELRKAEDARKAEAAR-KAEEERKAEEAR-KAEDAKKAEAVKKAE- 1233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 674 aelEFQLQSEQQKATEKERVAQEKDQLQEQLQAlkeslkvtkgslEEEKRRAADALEEQQRCISELKAETRSLVEQHKQE 753
Cdd:PTZ00121 1234 ---EAKKDAEEAKKAEEERNNEEIRKFEEARMA------------HFARRQAAIKAEEARKADELKKAEEKKKADEAKKA 1298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 754 QKELEEEKAGRKGLEAR----LQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYE--ESQQEEAQY 827
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKkadeAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEaaEKKKEEAKK 1378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 828 GAmfqEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKladdlstlQE 907
Cdd:PTZ00121 1379 KA---DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK--------AD 1447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 908 KMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDREPEWLEEQQGRQFCSTQAALQAME----REAEQMGNELER 983
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKadeaKKAEEAKKADEA 1527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 984 LRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELE--MRLQNALNEQRVEFATLQEALAHALTEKEG 1061
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDknMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1062 KDQELVKLR--GLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQ 1139
Cdd:PTZ00121 1608 KAEEAKKAEeaKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1140 QEQADSLERslEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQE 1219
Cdd:PTZ00121 1688 KKAAEALKK--EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKE 1765
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1220 AERKNSLISSLEEEVSilnrqvleKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLRE 1299
Cdd:PTZ00121 1766 EEKKAEEIRKEKEAVI--------EEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVAD 1837
|
810
....*....|....
gi 1622865026 1300 EAEKQRVASENLRQ 1313
Cdd:PTZ00121 1838 SKNMQLEEADAFEK 1851
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
215-916 |
9.77e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 9.77e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRL--ALLNEKQAASPLEPR------ELEELRDKNE 286
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELqkELYALANEISRLEQQkqilreRLANLERQLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 287 SLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEH---SRATQEWLEKQAQLE 363
Cdd:TIGR02168 320 ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLetlRSKVAQLELQIASLN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 364 KELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVL-------------------QLETLKQEAAT 424
Cdd:TIGR02168 400 NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELeelqeelerleealeelreELEEAEQALDA 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 425 LAANNTQLQARVETLETEQGQQE------AKLLAERDHFEEEKQQLSSLI---------------ANLQSSI-SNLSQAK 482
Cdd:TIGR02168 480 AERELAQLQARLDSLERLQENLEgfsegvKALLKNQSGLSGILGVLSELIsvdegyeaaieaalgGRLQAVVvENLNAAK 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 483 EELEQASQAHGARLT-----------------------AQVASLTSELTTLNATIQ--------------QQDQELADLK 525
Cdd:TIGR02168 560 KAIAFLKQNELGRVTflpldsikgteiqgndreilkniEGFLGVAKDLVKFDPKLRkalsyllggvlvvdDLDNALELAK 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 526 QQAKEE-------------------QAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEvTRRDHAQQLA 586
Cdd:TIGR02168 640 KLRPGYrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELE-ELEEELEQLR 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 587 TAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVEtacreq 666
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIE------ 792
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 667 hEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSL 746
Cdd:TIGR02168 793 -QLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEEL 871
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 747 VEQHKQEQKELEEEKAGRKGLEARLQQlgeahqaeteaLRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQ 826
Cdd:TIGR02168 872 ESELEALLNERASLEEALALLRSELEE-----------LSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDN 940
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 827 ygamFQEQLMtlkeecEKARQELQEAKEKVAGIESHSEL---QISRQQNELVELHA-NLArALQQVQEKEVR-----AQK 897
Cdd:TIGR02168 941 ----LQERLS------EEYSLTLEEAEALENKIEDDEEEarrRLKRLENKIKELGPvNLA-AIEEYEELKERydfltAQK 1009
|
810 820
....*....|....*....|.
gi 1622865026 898 --LADDLSTLQEKMAATSKEV 916
Cdd:TIGR02168 1010 edLTEAKETLEEAIEEIDREA 1030
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1144-1685 |
9.82e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.46 E-value: 9.82e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1144 DSLERslEAERASRAErdsaleTLQGQLEEKARELghSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERK 1223
Cdd:COG1196 203 EPLER--QAEKAERYR------ELKEELKELEAEL--LLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1224 NSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEK 1303
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1304 QRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHRE 1383
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1384 ELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRG---------- 1453
Cdd:COG1196 433 LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADyegflegvka 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1454 ---------------------------LGERANLGRQFLEVELDQAREKYVQELAAVRADAETRL---AEVQREAQSTAR 1503
Cdd:COG1196 513 alllaglrglagavavligveaayeaaLEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLpldKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1504 ELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQ 1583
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1584 AQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLT 1663
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|..
gi 1622865026 1664 AQVRSLEAQVAHADQQLRDLGK 1685
Cdd:COG1196 753 LEELPEPPDLEELERELERLER 774
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
595-1351 |
1.17e-18 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 93.67 E-value: 1.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 595 SLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQR-----EKAELSQKVEELRaRVETACREQHEA 669
Cdd:PTZ00121 1068 QDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKaeeakKKAEDARKAEEAR-KAEDARKAEEAR 1146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 670 QAQVAE-LEFQLQSEQQKATEKERVAQEKDQLQEQLQALkESLKVTKGSLEEEKRRAADA--LEEQQRCISELKAETRSL 746
Cdd:PTZ00121 1147 KAEDAKrVEIARKAEDARKAEEARKAEDAKKAEAARKAE-EVRKAEELRKAEDARKAEAArkAEEERKAEEARKAEDAKK 1225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 747 VEQHKQEQKELEEEKAGRKGLEARLQQ---LGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQE 823
Cdd:PTZ00121 1226 AEAVKKAEEAKKDAEEAKKAEEERNNEeirKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD 1305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 824 EAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVELHANLARAlQQVQEKEVRAQKLADDLS 903
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKA-EAAEKKKEEAKKKADAAK 1384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 904 TLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELER 983
Cdd:PTZ00121 1385 KKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK 1464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 984 LRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFATLQEALAHAlteKEGKD 1063
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA---DEAKK 1541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1064 QELVKlrglEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEptgpklEALRAEVSKLEQQcqqqqeqa 1143
Cdd:PTZ00121 1542 AEEKK----KADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAE------EARIEEVMKLYEE-------- 1603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1144 dslERSLEAERASRAERdsalETLQGQLEEKARELghsQSALASVQRELAALRTKVQDHSKAEDEWK---AQVARGRQEA 1220
Cdd:PTZ00121 1604 ---EKKMKAEEAKKAEE----AKIKAEELKKAEEE---KKKVEQLKKKEAEEKKKAEELKKAEEENKikaAEEAKKAEED 1673
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1221 ERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDrlrlLQAETASNSARAaERSSALREEVQSLREE 1300
Cdd:PTZ00121 1674 KKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE----LKKAEEENKIKA-EEAKKEAEEDKKKAEE 1748
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1301 AEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHT 1351
Cdd:PTZ00121 1749 AKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
434-1239 |
2.70e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 92.05 E-value: 2.70e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 434 ARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNAT 513
Cdd:TIGR02169 187 ERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 514 IQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGlrhQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATaAEERE 593
Cdd:TIGR02169 267 LEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEA---EIASLERSIAEKERELEDAEERLAKLEAEIDKLLAE-IEELE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 594 ASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQV 673
Cdd:TIGR02169 343 REIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEEL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 674 AELEFQLQSEQQKATEKERVAQEKD-------QLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSL 746
Cdd:TIGR02169 423 ADLNAAIAGIEAKINELEEEKEDKAleikkqeWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARAS 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 747 VEQHKQEQKELEEEKAGRKGLEARLQQLG---EAHQAETE-ALRQELAEAIAAQRTAESECEQLVKEVAAWRERY----- 817
Cdd:TIGR02169 503 EERVRGGRAVEEVLKASIQGVHGTVAQLGsvgERYATAIEvAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFlplnk 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 818 EESQQEEAQYGAM-----FQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQ----QNELVE--------LHAN 880
Cdd:TIGR02169 583 MRDERRDLSILSEdgvigFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMGKYRmvtlEGELFEksgamtggSRAP 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 881 LARALQQVQEKEvRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDREPEwlEEQQGRQF 960
Cdd:TIGR02169 663 RGGILFSRSEPA-ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE--EEKLKERL 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 961 CSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGR-AQADLALEKAAKAELEMRLQNAln 1039
Cdd:TIGR02169 740 EELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPeIQAELSKLEEEVSRIEARLREI-- 817
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1040 EQRVEFATLQEALAHalTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTG 1119
Cdd:TIGR02169 818 EQKLNRLTLEKEYLE--KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELE 895
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1120 PKLEALRAEVSKLEQQCQQQQEQADSLERSLEAerasRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKV 1199
Cdd:TIGR02169 896 AQLRELERKIEELEAQIEKKRKRLSELKAKLEA----LEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALE 971
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1622865026 1200 QDHSKAEDEWKAQVARGRQEAERKNSLissLEEEVSILNR 1239
Cdd:TIGR02169 972 PVNMLAIQEYEEVLKRLDELKEKRAKL---EEERKAILER 1008
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
972-1657 |
4.81e-17 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 88.27 E-value: 4.81e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 972 REAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAElemRLQNALNEQRVEFATLQEA 1051
Cdd:PTZ00121 1134 RKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAE---ELRKAEDARKAEAARKAEE 1210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1052 LAHALTEKEGKDQELVK-LRGLEAAQIKElEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVS 1130
Cdd:PTZ00121 1211 ERKAEEARKAEDAKKAEaVKKAEEAKKDA-EEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK 1289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1131 KleqqcqqqqeQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRElaalRTKVQDHSKAEDEWK 1210
Cdd:PTZ00121 1290 K----------KADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEE----AKKAAEAAKAEAEAA 1355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1211 AQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRlvmaESEKSQKLEDRLRllQAETASNSARAAERSSAL 1290
Cdd:PTZ00121 1356 ADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKK----KAEEDKKKADELK--KAAAAKKKADEAKKKAEE 1429
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1291 REEVQSLREEAEKQRVASE-NLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQAL--VSELLPAKHLC 1367
Cdd:PTZ00121 1430 KKKADEAKKKAEEAKKADEaKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKkkADEAKKAAEAK 1509
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1368 QQLQAEQAAAEKRHREEL---EQSKQAAGGLRAELLRAQRELGELIPLRQkvAEQERTAQQLRAEKAsyaEQLSMLKKAH 1444
Cdd:PTZ00121 1510 KKADEAKKAEEAKKADEAkkaEEAKKADEAKKAEEKKKADELKKAEELKK--AEEKKKAEEAKKAEE---DKNMALRKAE 1584
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1445 GLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAA--VRADAETR--LAEVQREAQSTARELEVMTAKYEGAKVKVL 1520
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAeeLKKAEEEKkkVEQLKKKEAEEKKKAEELKKAEEENKIKAA 1664
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1521 EERQRFQEEKQKL--TAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKL 1598
Cdd:PTZ00121 1665 EEAKKAEEDKKKAeeAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKK 1744
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 1599 QMEKAKTHYDAKKQqnqelqeqlqsLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQ 1657
Cdd:PTZ00121 1745 KAEEAKKDEEEKKK-----------IAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKR 1792
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1033-1717 |
3.60e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.11 E-value: 3.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1033 RLQNALNEQRVEFATLQEALAHALTEKEGKDQelvkLRGLEAA-QIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEA 1111
Cdd:TIGR02168 190 RLEDILNELERQLKSLERQAEKAERYKELKAE----LRELELAlLVLRLEELREELEELQEELKEAEEELEELTAELQEL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1112 AGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRE 1191
Cdd:TIGR02168 266 EEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1192 LAALRTKVQDHSKAEDEWKAQvargRQEAERKNsliSSLEEEVSILNRQVLEKEGESKEL-KRLVMAESEKSQkLEDRLR 1270
Cdd:TIGR02168 346 LEELKEELESLEAELEELEAE----LEELESRL---EELEEQLETLRSKVAQLELQIASLnNEIERLEARLER-LEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1271 LLQAETASNSARAAE-RSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQ---ALSTL 1346
Cdd:TIGR02168 418 RLQQEIEELLKKLEEaELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQArldSLERL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1347 QLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRhREELEQSKQAAGGLRAELL--------------RAQRELG----- 1407
Cdd:TIGR02168 498 QENLEGFSEGVKALLKNQSGLSGILGVLSELISV-DEGYEAAIEAALGGRLQAVvvenlnaakkaiafLKQNELGrvtfl 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1408 --------ELIPLRQKVAEQERTAQQLRAEKASYAEQLSM--------------LKKAHGLLAEENRGL----------- 1454
Cdd:TIGR02168 577 pldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvddLDNALELAKKLRPGYrivtldgdlvr 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1455 --------GERANLGRQFLEVELDQAREKyVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEER--- 1523
Cdd:TIGR02168 657 pggvitggSAKTNSSILERRREIEELEEK-IEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRkdl 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1524 QRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAA----EHYKLQ 1599
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALdelrAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1600 MEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQ 1679
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
730 740 750
....*....|....*....|....*....|....*...
gi 1622865026 1680 LRDLGKFQVATDALKSREPQAKPQLDLSIDSLDLSCEE 1717
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1012-1657 |
8.33e-16 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 84.42 E-value: 8.33e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1012 ERGRAQADLALEKAAKAELEMRlqNALNEQRVEFATLQEALAHALTEKEGKDQELVKLrGLEAAQIKELEELRQTMKQLK 1091
Cdd:PTZ00121 1101 EEAKKTETGKAEEARKAEEAKK--KAEDARKAEEARKAEDARKAEEARKAEDAKRVEI-ARKAEDARKAEEARKAEDAKK 1177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1092 EQLAKKEKE-HASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQ 1170
Cdd:PTZ00121 1178 AEAARKAEEvRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKF 1257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1171 LEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEevsiLNRQVLEKEGESKE 1250
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADE----AKKKAEEAKKKADA 1333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1251 LKRLVMAESEKSQ--KLEDRLRLLQAETASNSARAAE-RSSALREEVQSLREEAEKQRVASENLR--QELTSQAERAEEL 1325
Cdd:PTZ00121 1334 AKKKAEEAKKAAEaaKAEAEAAADEAEAAEEKAEAAEkKKEEAKKKADAAKKKAEEKKKADEAKKkaEEDKKKADELKKA 1413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1326 GQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQ-R 1404
Cdd:PTZ00121 1414 AAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKaE 1493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1405 ELGELIPLRQKVAEQERTAQQLR-AEKASYAEQLSMLKKAHGllAEENRGLGERANLGRQFLEVELDQAREKYVQE---L 1480
Cdd:PTZ00121 1494 EAKKKADEAKKAAEAKKKADEAKkAEEAKKADEAKKAEEAKK--ADEAKKAEEKKKADELKKAEELKKAEEKKKAEeakK 1571
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1481 AAVRADAETRLAEVQREAQStARELEVMTAKYEGAKVKVlEERQRFQEEKQKltaqVEELRKkladsDQASKVQQQKLKA 1560
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEE-ARIEEVMKLYEEEKKMKA-EEAKKAEEAKIK----AEELKK-----AEEEKKKVEQLKK 1640
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1561 VQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAER 1640
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE 1720
|
650
....*....|....*..
gi 1622865026 1641 LGHELQQAGLKTKEAEQ 1657
Cdd:PTZ00121 1721 LKKAEEENKIKAEEAKK 1737
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1078-1701 |
2.12e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 82.88 E-value: 2.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1078 KELEELRQTMKQLKEQLAKKEKEHASGSGA-QSEAAGRTEPTGPKLEALRAEVSKlEQQCQQQQEQADSLERSLEAERAS 1156
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKKAEDArKAEEARKAEDARKAEEARKAEDAK-RVEIARKAEDARKAEEARKAEDAK 1176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1157 RAERDSALETLQgqleeKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSI 1236
Cdd:PTZ00121 1177 KAEAARKAEEVR-----KAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNN 1251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1237 LNRQVLEKEGESKELKRLVMAESEKSQKLEDrLRLLQAETASNSARAAERssalREEVQSLREEAEKQRVASENLR--QE 1314
Cdd:PTZ00121 1252 EEIRKFEEARMAHFARRQAAIKAEEARKADE-LKKAEEKKKADEAKKAEE----KKKADEAKKKAEEAKKADEAKKkaEE 1326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1315 LTSQAERAEELGQELKAWQEKFFQKEQALSTlQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGG 1394
Cdd:PTZ00121 1327 AKKKADAAKKKAEEAKKAAEAAKAEAEAAAD-EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKK 1405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1395 LRAELLRAQRELGELIPLRQKvAEQERTAQQLRaEKASYAEQLSMLKKahgllaeenrglgeranlgrqfleveldQARE 1474
Cdd:PTZ00121 1406 KADELKKAAAAKKKADEAKKK-AEEKKKADEAK-KKAEEAKKADEAKK----------------------------KAEE 1455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1475 KYVQELAAVRADAETRLAEVQREAQStARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKladSDQASKVQ 1554
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEE-AKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKK---ADEAKKAE 1531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1555 QQKlKAVQAQGGESQQEAQRL----QARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEqlqslehLQKE 1630
Cdd:PTZ00121 1532 EAK-KADEAKKAEEKKKADELkkaeELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMK-------LYEE 1603
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1631 NKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDALKSREPQAK 1701
Cdd:PTZ00121 1604 EKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK 1674
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
223-900 |
6.91e-15 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 81.04 E-value: 6.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 223 LADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDrlALLNEKQAASPLEPRELEELRDKNESLTMRLHETLKQCQdl 302
Cdd:pfam12128 246 LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQ--ETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDR-- 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 303 ktekSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLEKELSTALQDkkcleeknei 382
Cdd:pfam12128 322 ----SELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQ---------- 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 383 LQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNtqlqARVETLETEQGQQEAKLLAERDHFEEEkq 462
Cdd:pfam12128 388 NNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLE----FNEEEYRLKSRLGELKLRLNQATATPE-- 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 463 qlssLIANLQSSISNLSQAKEELEQAsqahgarlTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQ 542
Cdd:pfam12128 462 ----LLLQLENFDERIERAREEQEAA--------NAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 543 EQASQGLRHqveQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEAleKEKAAKLEILQQ 622
Cdd:pfam12128 530 FPQAGTLLH---FLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDV--PEWAASEEELRE 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 623 QLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKerVAQEKDQLQE 702
Cdd:pfam12128 605 RLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKA--LAERKDSANE 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 703 QLQALKESLKVTKGSLEeekrraaDALEEQQRCISELKaetrslVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAET 782
Cdd:pfam12128 683 RLNSLEAQLKQLDKKHQ-------AWLEEQKEQKREAR------TEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAEL 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 783 EALRQELAEAIAAQRTAE---SECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMT----LKEECEKARQELQEAKEK 855
Cdd:pfam12128 750 KALETWYKRDLASLGVDPdviAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQrrprLATQLSNIERAISELQQQ 829
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 1622865026 856 VAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKLAD 900
Cdd:pfam12128 830 LARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLAT 874
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
215-926 |
2.08e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 79.34 E-value: 2.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAmmqQRIDRLALLNEKqaASPLEPRELEELRDKNESLTMRLHE 294
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLE---EIEQLLEELNKK--IKDLGEEEQLRVKEKIGELEAEIAS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 295 TLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLE---KELSTALQ 371
Cdd:TIGR02169 306 LERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEevdKEFAETRD 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 372 DKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEvlgdvlqLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLL 451
Cdd:TIGR02169 386 ELKDYREKLEKLKREINELKRELDRLQEELQRLSEE-------LADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 452 AERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQ----------------VASLTSELTT------ 509
Cdd:TIGR02169 459 QLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVrggraveevlkasiqgVHGTVAQLGSvgerya 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 510 ----------LNATIQQQDQELADLKQQAKEEQAQLA------QTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKE---- 569
Cdd:TIGR02169 539 taievaagnrLNNVVVEDDAVAKEAIELLKRRKAGRAtflplnKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPafky 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 570 ------VAEKQEVTRR--DHAQQLATAAEEREAS-------LRERDAALQQLEALEK--EKAAKLEILQQQLQVANETRD 632
Cdd:TIGR02169 619 vfgdtlVVEDIEAARRlmGKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEPAElqRLRERLEGLKRELSSLQSELR 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 633 SAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKAT----EKERVAQEKDQLQEQLQALK 708
Cdd:TIGR02169 699 RIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEnvksELKELEARIEELEEDLHKLE 778
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 709 ESLKVTKGSLEEEK----RRAADALEEQQRCI----SELKAETRSLVEQHKQEQKELEEEKAGRKGLEAR---LQQLGEA 777
Cdd:TIGR02169 779 EALNDLEARLSHSRipeiQAELSKLEEEVSRIearlREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQiksIEKEIEN 858
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 778 HQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQE---QLMTLKEECEKARQELQEAKE 854
Cdd:TIGR02169 859 LNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKkrkRLSELKAKLEALEEELSEIED 938
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 855 KVAGIESHSE---------LQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRK 925
Cdd:TIGR02169 939 PKGEDEEIPEeelsledvqAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
.
gi 1622865026 926 A 926
Cdd:TIGR02169 1019 V 1019
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
566-1269 |
2.29e-14 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 79.50 E-value: 2.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 566 QLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAA-KLEILQQQLQVANETRDSAQTSVTQAQR- 643
Cdd:pfam12128 213 PPKSRLNRQQVEHWIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELRLSHlHFGYKSDETLIASRQEERQETSAELNQLl 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 644 --EKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEK-DQLQEQLQALKESLKVTKGSL-- 718
Cdd:pfam12128 293 rtLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQlPSWQSELENLEERLKALTGKHqd 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 719 --EEEKRRAADALEEQQRCISELKAETRslveqhkqeqkeleeekagrKGLEARLQQLGEAhQAETEALRQELAEAIAAQ 796
Cdd:pfam12128 373 vtAKYNRRRSKIKEQNNRDIAGIKDKLA--------------------KIREARDRQLAVA-EDDLQALESELREQLEAG 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 797 RTAESECEQLVKEVAAWreryEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVagieshselqiSRQQNELVE 876
Cdd:pfam12128 432 KLEFNEEEYRLKSRLGE----LKLRLNQATATPELLLQLENFDERIERAREEQEAANAEV-----------ERLQSELRQ 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 877 LHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVarLETLVRKAGEQQETASRELVKEPARAGDREPEWLEEQ- 955
Cdd:pfam12128 497 ARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTL--LHFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSv 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 956 -QGRQFCSTQAALQAMER-EAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMR 1033
Cdd:pfam12128 575 gGELNLYGVKLDLKRIDVpEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLD 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1034 LQNALNEQRVEFATLQEALAhalTEKEGKDQELVKLrgleAAQIKELE-ELRQTMKQLKEQLakkekehasgsgaqseaa 1112
Cdd:pfam12128 655 LRRLFDEKQSEKDKKNKALA---ERKDSANERLNSL----EAQLKQLDkKHQAWLEEQKEQK------------------ 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1113 grTEPTGPKLEALRAEVSKLEQQCqqqqeqaDSLERSLEAERASRAERDSALETlqgQLEEKARELGHSQSALASVQREL 1192
Cdd:pfam12128 710 --REARTEKQAYWQVVEGALDAQL-------ALLKAAIAARRSGAKAELKALET---WYKRDLASLGVDPDVIAKLKREI 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1193 AALRTKV----QDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDR 1268
Cdd:pfam12128 778 RTLERKIeriaVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVR 857
|
.
gi 1622865026 1269 L 1269
Cdd:pfam12128 858 L 858
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
236-990 |
2.53e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 79.34 E-value: 2.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 236 ELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQaasplepRELEELRDKNESLtmRLHETLKQCQDLKTEKSQMDRKISQ 315
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKA-------ERYQALLKEKREY--EGYELLKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 316 LLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEwleKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLA 395
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE---EQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 396 LLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSI 475
Cdd:TIGR02169 326 KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 476 SNLSQAKEELEQASQAHG------ARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGL 549
Cdd:TIGR02169 406 RELDRLQEELQRLSEELAdlnaaiAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKEL 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 550 RHQVEQLSSSLKQKEQQLKEVAEKQEVT--------------------RRDHAQQLATAAEEREAS-------------- 595
Cdd:TIGR02169 486 SKLQRELAEAEAQARASEERVRGGRAVEevlkasiqgvhgtvaqlgsvGERYATAIEVAAGNRLNNvvveddavakeaie 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 596 -LRERDAA------LQQLEALEKEKAAKLE----------------------------ILQQQLQVANETRDSAQ----- 635
Cdd:TIGR02169 566 lLKRRKAGratflpLNKMRDERRDLSILSEdgvigfavdlvefdpkyepafkyvfgdtLVVEDIEAARRLMGKYRmvtle 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 636 --------------TSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELE---FQLQSEQQKATEK-ERVAQEK 697
Cdd:TIGR02169 646 gelfeksgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEnrlDELSQELSDASRKiGEIEKEI 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 698 DQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVE-QHKQEQKELEEEKAGRKGLEARLQQLGE 776
Cdd:TIGR02169 726 EQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKlEEALNDLEARLSHSRIPEIQAELSKLEE 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 777 AHQ---AETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQygamFQEQLMTLKEECEKARQELQEAK 853
Cdd:TIGR02169 806 EVSrieARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN----LNGKKEELEEELEELEAALRDLE 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 854 EKVAGIEShselQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETlvrkagEQQETA 933
Cdd:TIGR02169 882 SRLGDLKK----ERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEE------IPEEEL 951
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 934 SRELVKEPARAGDREPEWLEEQQGRqfcstqaALQAMEREAEQMgNELERLRAALME 990
Cdd:TIGR02169 952 SLEDVQAELQRVEEEIRALEPVNML-------AIQEYEEVLKRL-DELKEKRAKLEE 1000
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
786-1642 |
4.65e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.19 E-value: 4.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 786 RQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGamfqEQLMTLKEECEKAR--QELQEAKEKVAGIESHS 863
Cdd:TIGR02169 155 RRKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIIDEKR----QQLERLRREREKAEryQALLKEKREYEGYELLK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 864 EL-----QISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEK-MAATSKEVARLETLVRKAGEQQETASREL 937
Cdd:TIGR02169 231 EKealerQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 938 vkepaRAGDREPEWLEEQQGRqfcsTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQ 1017
Cdd:TIGR02169 311 -----AEKERELEDAEERLAK----LEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFA 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1018 ADLALEKAAKAELEMrLQNALNEQRVEFATLQEalahaltEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKK 1097
Cdd:TIGR02169 382 ETRDELKDYREKLEK-LKREINELKRELDRLQE-------ELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1098 EKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARE 1177
Cdd:TIGR02169 454 EWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSV 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1178 LGHSQSALASVQ-RELAALRTKVQDHSKAEDEWKAQVARGR------QEAERKNSLISSLEEEVSI---LNRQVLEKEGE 1247
Cdd:TIGR02169 534 GERYATAIEVAAgNRLNNVVVEDDAVAKEAIELLKRRKAGRatflplNKMRDERRDLSILSEDGVIgfaVDLVEFDPKYE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1248 SKEL----KRLVMAESEKSQKLEDRLRLLQAET-----------ASNSARAAE-RSSALREEVQSLREEAEKQRVASENL 1311
Cdd:TIGR02169 614 PAFKyvfgDTLVVEDIEAARRLMGKYRMVTLEGelfeksgamtgGSRAPRGGIlFSRSEPAELQRLRERLEGLKRELSSL 693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1312 RQELTSQAERAEELGQELKAWQEKffqkeqaLSTLQLEhtstqalvsellpakhlcqqlqaeqaaaekrhREELEQSKQA 1391
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRK-------IGEIEKE--------------------------------IEQLEQEEEK 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1392 AGGLRAELLRAQRElgelipLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLaeenrglgeRANLGRQFLEVELDQ 1471
Cdd:TIGR02169 735 LKERLEELEEDLSS------LEQEIENVKSELKELEARIEELEEDLHKLEEALNDL---------EARLSHSRIPEIQAE 799
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1472 AR--EKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQE---EKQKLTAQVEELRKKLAD 1546
Cdd:TIGR02169 800 LSklEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENlngKKEELEEELEELEAALRD 879
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1547 SDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMekakTHYDAKKQQNQELQEQLQSLEH 1626
Cdd:TIGR02169 880 LESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEEL----SEIEDPKGEDEEIPEEELSLED 955
|
890
....*....|....*.
gi 1622865026 1627 LQKENKELRAEAERLG 1642
Cdd:TIGR02169 956 VQAELQRVEEEIRALE 971
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
215-856 |
8.95e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 77.49 E-value: 8.95e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEP-------RELEELRDKNES 287
Cdd:PTZ00121 1144 EARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAarkaeeeRKAEEARKAEDA 1223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 288 LTM----RLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDAlneltEEHSRATQEWLEKQAQLE 363
Cdd:PTZ00121 1224 KKAeavkKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA-----DELKKAEEKKKADEAKKA 1298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 364 KELSTALQDKKCLEEKNEILQGKLSQLEehlALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQ 443
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKKADEAKKKAEE---AKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEE 1375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 444 GQQEAKLLAERdhfEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTlNATIQQQDQELAD 523
Cdd:PTZ00121 1376 AKKKADAAKKK---AEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKK-KAEEAKKADEAKK 1451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 524 LKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAE--KQEVTRRDHAQQLATAAEEREA-SLRERD 600
Cdd:PTZ00121 1452 KAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADeaKKAAEAKKKADEAKKAEEAKKAdEAKKAE 1531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 601 AALQQLEALEKEKAAKLEILQ--QQLQVANETRDSAQTSVTQAQRE----KAELSQKVEELRArvetacreqhEAQAQVA 674
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKkaEELKKAEEKKKAEEAKKAEEDKNmalrKAEEAKKAEEARI----------EEVMKLY 1601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 675 ELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKgslEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQ 754
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKE---AEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAE 1678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 755 KELEEEKAGRKGLEARLQQLGEAHQAEtEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQ-EEAQYGAMFQE 833
Cdd:PTZ00121 1679 EAKKAEEDEKKAAEALKKEAEEAKKAE-ELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKaEEAKKDEEEKK 1757
|
650 660
....*....|....*....|...
gi 1622865026 834 QLMTLKEECEKARQELQEAKEKV 856
Cdd:PTZ00121 1758 KIAHLKKEEEKKAEEIRKEKEAV 1780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
415-746 |
1.12e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.02 E-value: 1.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 415 LETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHgA 494
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL-T 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 495 RLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLkEVAEKQ 574
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ----LKEELKALREALDELRAELTLLNEEAANLRERL-ESLERR 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 575 EVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEE 654
Cdd:TIGR02168 833 IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 655 LRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQE------------KDQLQEQLQALK-------------- 708
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEeaealenkieddEEEARRRLKRLEnkikelgpvnlaai 992
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1622865026 709 ---ESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSL 746
Cdd:TIGR02168 993 eeyEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARER 1033
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
553-1543 |
1.16e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.03 E-value: 1.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 553 VEQLSSSLKQKEQQLKEVAEKQEVTR---RDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANE 629
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDliiDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 630 TRDSAQTSVTQAQREKAELSQKVEELRARVEtacreqheaqaqvaelefQLQSEQQKATEKERVaqekdQLQEQLQALKE 709
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEKRLEEIEQLLE------------------ELNKKIKDLGEEEQL-----RVKEKIGELEA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 710 SLKVTKGSLEEEKRRAADALEEQQrcisELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLgeahQAETEALRQEL 789
Cdd:TIGR02169 302 EIASLERSIAEKERELEDAEERLA----KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAEL----KEELEDLRAEL 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 790 AEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQygamfqeqlmtLKEECEKARQELQEAKEKVAGIEShselqisr 869
Cdd:TIGR02169 374 EEVDKEFAETRDELKDYREKLEKLKREINELKRELDR-----------LQEELQRLSEELADLNAAIAGIEA-------- 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 870 qqnELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLEtlvrkagEQQETASRELVKEPARAGdrep 949
Cdd:TIGR02169 435 ---KINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE-------KELSKLQRELAEAEAQAR---- 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 950 EWLEEQQGRQFCST--QAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVAR-----LTQERGRAQADLAL 1022
Cdd:TIGR02169 501 ASEERVRGGRAVEEvlKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNNVVVEDDAVAKeaielLKRRKAGRATFLPL 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1023 EKAAKAELEMRLqnALNEQRVEFATlqealahALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQ-----LKEQLAKK 1097
Cdd:TIGR02169 581 NKMRDERRDLSI--LSEDGVIGFAV-------DLVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMGKyrmvtLEGELFEK 651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1098 EKEHASGSGAQSEAAGRTEPTGPKLEALRAEVskleqqcqqqqeqaDSLERSLEAERASRAERDSALETLQGQLEEKARE 1177
Cdd:TIGR02169 652 SGAMTGGSRAPRGGILFSRSEPAELQRLRERL--------------EGLKRELSSLQSELRRIENRLDELSQELSDASRK 717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1178 LGHSQSALASVQRELAALRtkvqdhskaedewkaqvargrQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMA 1257
Cdd:TIGR02169 718 IGEIEKEIEQLEQEEEKLK---------------------ERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1258 ESEKSQKLEDRLRllqaetasnsaraaerssalREEVQSLREEAEKqrvasenLRQELTSQAERAEELGQELKAWQEKFF 1337
Cdd:TIGR02169 777 LEEALNDLEARLS--------------------HSRIPEIQAELSK-------LEEEVSRIEARLREIEQKLNRLTLEKE 829
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1338 QKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGElipLRQKVA 1417
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRE---LERKIE 906
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1418 EQERTAQQLRaekasyaEQLSMLKKAHGLLAEENRGLGEraNLGRQFLEVELDQAREKYVQELAAVRADAEtRLAEVQRE 1497
Cdd:TIGR02169 907 ELEAQIEKKR-------KRLSELKAKLEALEEELSEIED--PKGEDEEIPEEELSLEDVQAELQRVEEEIR-ALEPVNML 976
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*.
gi 1622865026 1498 AQSTARELEVMTAKYEGAKVKVLEERqrfqEEKQKLTAQVEELRKK 1543
Cdd:TIGR02169 977 AIQEYEEVLKRLDELKEKRAKLEEER----KAILERIEEYEKKKRE 1018
|
|
| HkD_SF |
cd22211 |
Hook domain-containing proteins superfamily; The Hook domain superfamily includes Hook adaptor ... |
8-136 |
1.71e-13 |
|
Hook domain-containing proteins superfamily; The Hook domain superfamily includes Hook adaptor proteins, Hook-related proteins and nuclear mitotic apparatus protein (NuMA). They share an N-terminal conserved globular Hook domain, which folds as a variant of the helical calponin homology (CH) domain with an extended alpha-helix. The Hook domain is responsible for the binding of microtubule. The Hook family includes microtubule-binding proteins, Hook1-3. Hook1 is required for spermatid differentiation. Hook2 contributes to the establishment and maintenance of centrosome function. Hook3 is an adaptor protein for microtubule-dependent intracellular vesicle and protein trafficking, and is involved in Golgi and endosome transport. Hook proteins are components of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex. The Hook-related protein (HkRP) family includes Daple, Girdin and Gipie. Daple, also called Dvl-associating protein with a high frequency of leucine residues, or coiled-coil domain-containing protein 88C(CCDC88C), or Hook-related protein 2 (HkRP2), is a novel non-receptor nucleotide exchange factor (GEF) required for activation of guanine nucleotide-binding proteins (G-proteins) during non-canonical Wnt signaling. Girdin, also called Akt phosphorylation enhancer (APE), or coiled-coil domain-containing protein 88A (CCDC88A), or G alpha-interacting vesicle-associated protein (GIV), or Girders of actin filament, or Hook-related protein 1 (HkRP1), is a bifunctional modulator of guanine nucleotide-binding proteins (G proteins). Gipie, also called GRP78-interacting protein induced by ER stress, or coiled-coil domain-containing protein 88B(CCDC88B), or brain leucine zipper domain-containing protein, or Hook-related protein 3 (HkRP3), is a novel actin cytoskeleton-binding protein and Akt substrate that regulates cell migratory responses in various biological contexts. NuMA, also called nuclear mitotic apparatus protein 1, or nuclear matrix protein-22 (NMP-22), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of the spindle poles and the alignment and the segregation of chromosomes during mitotic cell division.
Pssm-ID: 411792 Cd Length: 145 Bit Score: 69.61 E-value: 1.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 8 GAALLSWVNSLHVADPVEAVLQLQDCSIFIKI---IDRLHGTEEGQQILQQPVP-----ERLDFVCSFLQK----NQKHP 75
Cdd:cd22211 1 EAALLAWINTFPLSSPVESLDDLSDGVVLAEIlsqIDPSYFDSEWLESRDSSDNwvlklNNLKKLYRSLSKyyreVLGQQ 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622865026 76 SSPECLVSAQKVLE-GSELELAKMTMLLLYHSTMSSKSPRD---WEQFEYKIQAELAVILKFVLD 136
Cdd:cd22211 81 LSDLPLPDLSAIARdGDEEEIVKLLELVLGAAVQCENKEEYiarIQQLDESTQAELMLIIQEVLE 145
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
430-932 |
4.66e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 74.69 E-value: 4.66e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 430 TQLQARVETLETEqgqqEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTT 509
Cdd:PRK02224 202 KDLHERLNGLESE----LAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEI-EDLRETIAETEREREE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 510 LNATIQQQDQ---ELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEvAEKQEVTRRDHAQQLA 586
Cdd:PRK02224 277 LAEEVRDLRErleELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQA-HNEEAESLREDADDLE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 587 TAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANE-------TRDSAQTSVTQAQREKAELSQKVEELRARV 659
Cdd:PRK02224 356 ERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRErfgdapvDLGNAEDFLEELREERDELREREAELEATL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 660 ETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCisEL 739
Cdd:PRK02224 436 RTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRI--ER 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 740 KAETRSLVEQHKQEQkeleeekagRKGLEARLQQLGEAHqAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEE 819
Cdd:PRK02224 514 LEERREDLEELIAER---------RETIEEKRERAEELR-ERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAE 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 820 SQQEEAQYGAMfqEQLMTLKEECEKARQELQEAKEKVAGI------------ESHSELQISRQQNELVELHANLARA--- 884
Cdd:PRK02224 584 LKERIESLERI--RTLLAAIADAEDEIERLREKREALAELnderrerlaekrERKRELEAEFDEARIEEAREDKERAeey 661
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 885 LQQVQEK--EVRAQKLA------------DDLSTLQEKMAATSKEVARLETLVRKAGEQQET 932
Cdd:PRK02224 662 LEQVEEKldELREERDDlqaeigavenelEELEELRERREALENRVEALEALYDEAEELESM 723
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
350-1102 |
1.05e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 73.85 E-value: 1.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 350 RATQEWLEKQAQLEKELSTALQDKKcLEEKNEILQGKLSQLEEHLALLRENPPQEKgevlgdvlqlETLKQEAATLAANN 429
Cdd:pfam02463 146 IIAMMKPERRLEIEEEAAGSRLKRK-KKEALKKLIEETENLAELIIDLEELKLQEL----------KLKEQAKKALEYYQ 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 430 TQLQARvetlETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTT 509
Cdd:pfam02463 215 LKEKLE----LEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 510 LNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRhQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAA 589
Cdd:pfam02463 291 LAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELK-KEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLE 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 590 EEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETAcREQHEA 669
Cdd:pfam02463 370 QLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELK-QGKLTE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 670 QAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:pfam02463 449 EKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 750 HKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGA 829
Cdd:pfam02463 529 GRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 830 MFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKM 909
Cdd:pfam02463 609 DKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESE 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 910 AATSKEVARLETLVRKAGEQQETASRELVKEPARAGDREPEWLEEQQGRQFCSTQAALQAMEREA----EQMGNELERLR 985
Cdd:pfam02463 689 LAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEksrlKKEEKEEEKSE 768
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 986 AALMESQGQQQEERGQQEREVARLTQERGRAQADLA------LEKAAKAELEMRLQNALNEQRVEFATLQEALAHALTEK 1059
Cdd:pfam02463 769 LSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRaleeelKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKL 848
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 1622865026 1060 EGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHA 1102
Cdd:pfam02463 849 EKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESK 891
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1187-1717 |
4.90e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 72.10 E-value: 4.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1187 SVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMA-ESEKSQKL 1265
Cdd:PTZ00121 1087 NRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIArKAEDARKA 1166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1266 EDRLRLLQAETASNSARAAERSSAlrEEVQSLRE--EAEKQRVASENLRQELTSQAERAEELGQELKAwqEKFFQKEQAL 1343
Cdd:PTZ00121 1167 EEARKAEDAKKAEAARKAEEVRKA--EELRKAEDarKAEAARKAEEERKAEEARKAEDAKKAEAVKKA--EEAKKDAEEA 1242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1344 STLQLEHTSTQALVSELLPAKHLcQQLQAEQAAAEKRHREELEQSKQAAgglRAELLRAQRELGELIPLRQKvAEQERTA 1423
Cdd:PTZ00121 1243 KKAEEERNNEEIRKFEEARMAHF-ARRQAAIKAEEARKADELKKAEEKK---KADEAKKAEEKKKADEAKKK-AEEAKKA 1317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1424 QQLRAEKASYAEQLSMLKKAhgllAEENRGLGERANLGRQFLEVELDQAREK-----YVQELAAVRADAETRLAEVQREA 1498
Cdd:PTZ00121 1318 DEAKKKAEEAKKKADAAKKK----AEEAKKAAEAAKAEAEAAADEAEAAEEKaeaaeKKKEEAKKKADAAKKKAEEKKKA 1393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1499 QSTARELEVMTAKYEGAKvKVLEERQRFQEEKQKL--TAQVEELRKKLAD----------SDQASKVQQQKLKAVQAQGG 1566
Cdd:PTZ00121 1394 DEAKKKAEEDKKKADELK-KAAAAKKKADEAKKKAeeKKKADEAKKKAEEakkadeakkkAEEAKKAEEAKKKAEEAKKA 1472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1567 ESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQ 1646
Cdd:PTZ00121 1473 DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELK 1552
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 1647 QA-----GLKTKEAEQTCRHLTAQVRSL-EAQVAHADQQLRDLGKFQVATDALKSREPQAKPQLDLSIDSLDLSCEE 1717
Cdd:PTZ00121 1553 KAeelkkAEEKKKAEEAKKAEEDKNMALrKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE 1629
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
586-1101 |
1.09e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.45 E-value: 1.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 586 ATAAEEREASLRERdaaLQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVT---QAQREKAELSQKVEELRARVETA 662
Cdd:PRK02224 194 AQIEEKEEKDLHER---LNGLESELAELDEEIERYEEQREQARETRDEADEVLEeheERREELETLEAEIEDLRETIAET 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 663 CREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKEslkvtkgSLEEEKRRAADALEEQQRCISELKAE 742
Cdd:PRK02224 271 EREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARRE-------ELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 743 TRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEA---HQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEE 819
Cdd:PRK02224 344 AESLREDADDLEERAEELREEAAELESELEEAREAvedRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 820 SQQEEAQYGAmfqeQLMTLKEECEKARQELQEAK-----EKVAGIESHSELQISRQQNElvELHANLARALQQVQEKEVR 894
Cdd:PRK02224 424 LREREAELEA----TLRTARERVEEAEALLEAGKcpecgQPVEGSPHVETIEEDRERVE--ELEAELEDLEEEVEEVEER 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 895 ------AQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETaSRELVKEPARAGDREPEWLEEQQGRQfCSTQAALQ 968
Cdd:PRK02224 498 leraedLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEE-LRERAAELEAEAEEKREAAAEAEEEA-EEAREEVA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 969 AMEREAEQMGNELERLRA-----ALMESQGQQQEERGQQEREVARLTQERgraQADLALEKAAKAELEMRLQNA----LN 1039
Cdd:PRK02224 576 ELNSKLAELKERIESLERirtllAAIADAEDEIERLREKREALAELNDER---RERLAEKRERKRELEAEFDEArieeAR 652
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 1040 EQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEH 1101
Cdd:PRK02224 653 EDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREALENRVEALEALY 714
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
402-1100 |
1.34e-11 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 70.38 E-value: 1.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 402 PQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQA 481
Cdd:TIGR00618 162 SKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 482 KEELEQASQAHGARLTAQVA--SLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSS 559
Cdd:TIGR00618 242 HAYLTQKREAQEEQLKKQQLlkQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMR 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 560 LKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVanetrdsaqTSVT 639
Cdd:TIGR00618 322 SRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQK---------TTLT 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 640 QAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEkdQLQEQLQALKESLKVTKGSLE 719
Cdd:TIGR00618 393 QKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITC--TAQCEKLEKIHLQESAQSLKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 720 EEKrraadaLEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGR-KGLEARLQQLG--EAHQAETEALRQELAEAIAAQ 796
Cdd:TIGR00618 471 REQ------QLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGScIHPNPARQDIDnpGPLTRRMQRGEQTYAQLETSE 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 797 RTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEqlmtLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVE 876
Cdd:TIGR00618 545 EDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNR----SKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRK 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 877 LHANLARaLQQVQEKEVRAQKLADDLSTLQEkmaatskevarletlvrkageQQETASRELVKEPARAgdrepewLEEQQ 956
Cdd:TIGR00618 621 LQPEQDL-QDVRLHLQQCSQELALKLTALHA---------------------LQLTLTQERVREHALS-------IRVLP 671
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 957 GRQFCSTQAALQAMEREAEQMGNELERLrAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQN 1036
Cdd:TIGR00618 672 KELLASRQLALQKMQSEKEQLTYWKEML-AQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMH 750
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622865026 1037 ALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKE 1100
Cdd:TIGR00618 751 QARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPS 814
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1014-1683 |
1.39e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.10 E-value: 1.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1014 GRAQADLALEKAaKAELEM------RLQNALNEQRVEFATLQEALAHA-----LTEKEGKDQELVKLRGLEAAQ------ 1076
Cdd:TIGR02169 164 GVAEFDRKKEKA-LEELEEveenieRLDLIIDEKRQQLERLRREREKAeryqaLLKEKREYEGYELLKEKEALErqkeai 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1077 IKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGP--------KLEALRAEVSKLEQQCQQQQEQADSLER 1148
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlrvkeKIGELEAEIASLERSIAEKERELEDAEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1149 SLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVargrqeaerknsliS 1228
Cdd:TIGR02169 323 RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDEL--------------K 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1229 SLEEEVSILNRqvlekegESKELKRLVMAESEKSQKLEDRLRLLQAETasnsARAAERSSALREEVQSLREEAEKQRvas 1308
Cdd:TIGR02169 389 DYREKLEKLKR-------EINELKRELDRLQEELQRLSEELADLNAAI----AGIEAKINELEEEKEDKALEIKKQE--- 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1309 enlrqeltsqaERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKhlcqQLQAEQAAAEKRHREELEQS 1388
Cdd:TIGR02169 455 -----------WKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQA----RASEERVRGGRAVEEVLKAS 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1389 KQAAGGLRAELLRAQRELGELIP------LRQKVAEQERTAQQ----LRAEKASYAEQLSMLKKAHGLLaeENRGLGERA 1458
Cdd:TIGR02169 520 IQGVHGTVAQLGSVGERYATAIEvaagnrLNNVVVEDDAVAKEaielLKRRKAGRATFLPLNKMRDERR--DLSILSEDG 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1459 NLGRQFLEVELDQAREKYVQEL-----------AAVRADAETRLAEVQRE----------AQSTARELEVMTAKYEGAKV 1517
Cdd:TIGR02169 598 VIGFAVDLVEFDPKYEPAFKYVfgdtlvvedieAARRLMGKYRMVTLEGElfeksgamtgGSRAPRGGILFSRSEPAELQ 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1518 KVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYK 1597
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1598 LQMEKAKTHYDAKKQQNQELQEQLQSLEH--LQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAH 1675
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEArlSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQE 837
|
....*...
gi 1622865026 1676 ADQQLRDL 1683
Cdd:TIGR02169 838 LQEQRIDL 845
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
406-711 |
1.90e-11 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 69.86 E-value: 1.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 406 GEVLGDVLQLETLKQEAATLAANNTQLQARVETLeteqgQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKeeL 485
Cdd:NF012221 1528 GYILDNVVATSESSQQADAVSKHAKQDDAAQNAL-----ADKERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNA--L 1600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 486 EQASQAHGARLTAQVASLTSELTTLNATIQQ---QDQELADLKQQAKEEQAQLAQTLQQQEQASQGL--RHQVEQLSSSL 560
Cdd:NF012221 1601 ETNGQAQRDAILEESRAVTKELTTLAQGLDAldsQATYAGESGDQWRNPFAGGLLDRVQEQLDDAKKisGKQLADAKQRH 1680
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 561 KQKEQQLKEVAEKQE--VTRRDHAQQLATAAEER---EASLRERDAALQQLEALEKEKAAKLEIlqQQLQVANETRDSAQ 635
Cdd:NF012221 1681 VDNQQKVKDAVAKSEagVAQGEQNQANAEQDIDDakaDAEKRKDDALAKQNEAQQAESDANAAA--NDAQSRGEQDASAA 1758
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 636 TSVT-QAQREKAELSQ----KVEELRARVETACREQHEAQAqVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKES 710
Cdd:NF012221 1759 ENKAnQAQADAKGAKQdesdKPNRQGAAGSGLSGKAYSVEG-VAEPGSHINPDSPAAADGRFSEGLTEQEQEALEGATNA 1837
|
.
gi 1622865026 711 L 711
Cdd:NF012221 1838 V 1838
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
205-836 |
5.07e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.17 E-value: 5.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 205 MGDILQTPQFQMRRLKKQLADErsnrDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnEKQAASPLEPRELEELRDK 284
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRT----ENIEELIKEKEKELEEVLREINEISSELPELR---EELEKLEKEVKELEELKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 285 NESLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFAShLQQLQDALNELTEEHSratqEWLEKQAQLEK 364
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE-LKEKAEEYIKLSEFYE----EYLDELREIEK 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 365 ELSTALQDKKCLEEKNEILQGKLSQLEEhLALLRENPPQEKGEVLGDVLQLETLKQeaatLAANNTQLQARVETLETEQG 444
Cdd:PRK03918 315 RLSRLEEEINGIEERIKELEEKEERLEE-LKKKLKELEKRLEELEERHELYEEAKA----KKEELERLKKRLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 445 QQEAKLLAER-DHFEEEKQQLSSLIANLQSSISNLSQAKEELEQA-----------SQAHGARLtaqVASLTSELTTLNA 512
Cdd:PRK03918 390 EKELEELEKAkEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkcpvcgrelTEEHRKEL---LEEYTAELKRIEK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 513 TIQQQDQELADLKQQAKEEQAQLAQtlqqqeqasqglrhqvEQLSSSLKQKEQQLKEVAEKQEVTrrdHAQQLATAAEER 592
Cdd:PRK03918 467 ELKEIEEKERKLRKELRELEKVLKK----------------ESELIKLKELAEQLKELEEKLKKY---NLEELEKKAEEY 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 593 EASLRERDAALQQLEALEKEkAAKLEILQQQLQVANETRDSaqtsvtqAQREKAELSQKVEEL----RARVETACREQHE 668
Cdd:PRK03918 528 EKLKEKLIKLKGEIKSLKKE-LEKLEELKKKLAELEKKLDE-------LEEELAELLKELEELgfesVEELEERLKELEP 599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 669 AQAQVAELefqLQSEQQKATEKERVAQEKDQLQEQLqalkESLKVTKGSLEEEKRRaadaLEEQQRCISElkaetrslvE 748
Cdd:PRK03918 600 FYNEYLEL---KDAEKELEREEKELKKLEEELDKAF----EELAETEKRLEELRKE----LEELEKKYSE---------E 659
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 749 QHKQEQKELEEEKAGRKGLEARLQQLgEAHQAETEALRQELAEAIAAQRTAESECEQLVKEvaawRERYEESQQEEAQYG 828
Cdd:PRK03918 660 EYEELREEYLELSRELAGLRAELEEL-EKRREEIKKTLEKLKEELEEREKAKKELEKLEKA----LERVEELREKVKKYK 734
|
....*...
gi 1622865026 829 AMFQEQLM 836
Cdd:PRK03918 735 ALLKERAL 742
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
647-1197 |
1.72e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.60 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 647 ELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEqlqalkeslkvTKGSLEEEKRRAA 726
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRE-----------TIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 727 DALEEQQRCISELKAETRSLVEQhkqeqkeLEEEKAGRKGLEARLQQLgeahQAETEALRQELAEAIAAQRTAESECEQL 806
Cdd:PRK02224 279 EEVRDLRERLEELEEERDDLLAE-------AGLDDADAEAVEARREEL----EDRDEELRDRLEECRVAAQAHNEEAESL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 807 VKEVAAWRERYEESQQEEAqygamfqeqlmTLKEECEKARQELQEAKEKVAGIEShselqisrqqnELVELHANLARALQ 886
Cdd:PRK02224 348 REDADDLEERAEELREEAA-----------ELESELEEAREAVEDRREEIEELEE-----------EIEELRERFGDAPV 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 887 QVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPArAGDREPEWLEEQQGRQfCSTQAA 966
Cdd:PRK02224 406 DLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPV-EGSPHVETIEEDRERV-EELEAE 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 967 LQAMEREAEQMGNELERLRAAlmesqgqqqeerGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQnALNEQRVEFA 1046
Cdd:PRK02224 484 LEDLEEEVEEVEERLERAEDL------------VEAEDRIERLEERREDLEELIAERRETIEEKRERAE-ELRERAAELE 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1047 TLQEALAHALTEKEGKDQElvklrglEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALR 1126
Cdd:PRK02224 551 AEAEEKREAAAEAEEEAEE-------AREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELND 623
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 1127 AEVSKLEQQCQQQQEQADSLERS-LEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRT 1197
Cdd:PRK02224 624 ERRERLAEKRERKRELEAEFDEArIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
460-1101 |
4.43e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.32 E-value: 4.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 460 EKQQLSSLIANLQSSISNLSQAKEELEQASQahgarltaQVASLTsELTTLNATIQQQDQELADLKQQAKE-EQAQLAQT 538
Cdd:COG4913 219 EEPDTFEAADALVEHFDDLERAHEALEDARE--------QIELLE-PIRELAERYAAARERLAELEYLRAAlRLWFAQRR 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 539 LQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQqlataaeereASLRERDAALQQLEALEKEKA---A 615
Cdd:COG4913 290 LELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRG----------NGGDRLEQLEREIERLERELEereR 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 616 KLEILQQQLQV----ANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQS-EQQKATEK 690
Cdd:COG4913 360 RRARLEALLAAlglpLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASlERRKSNIP 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 691 ERVAQEKDQLQEQLQALKESLK-----VTKGSLEEEKRRAADAL----------EEQQ-----RCISELKAETRSLVEQH 750
Cdd:COG4913 440 ARLLALRDALAEALGLDEAELPfvgelIEVRPEEERWRGAIERVlggfaltllvPPEHyaaalRWVNRLHLRGRLVYERV 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 751 KQEQKELEEEKAGRKGLEARLQqlGEAHQAeTEALRQELAEAIAAqRTAESEcEQLVKE---------VAAWRERYE--- 818
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLD--FKPHPF-RAWLEAELGRRFDY-VCVDSP-EELRRHpraitragqVKGNGTRHEkdd 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 819 -ESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAgieshselQISRQQNELVELHANLARaLQQVQEKEVRAQK 897
Cdd:COG4913 595 rRRIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLE--------ALEAELDALQERREALQR-LAEYSWDEIDVAS 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 898 LADDLSTLQEKMA---ATSKEVARLETLVRKAGEQQETASRELVKEPARAGDREPEW--LEEQqgrqfcstQAALQAMER 972
Cdd:COG4913 666 AEREIAELEAELErldASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELeqAEEE--------LDELQDRLE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 973 EAEQMGNELERLRAalmESQGQQQEERGQQEREVARLTQERGRAQADLAlekaakaelemRLQNALNEQRVEFATLQEAL 1052
Cdd:COG4913 738 AAEDLARLELRALL---EERFAAALGDAVERELRENLEERIDALRARLN-----------RAEEELERAMRAFNREWPAE 803
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1053 AHAL-TEKEGKDQELVKLRGLEAAqikELEELRQTMKQLKEQLAKKEKEH 1101
Cdd:COG4913 804 TADLdADLESLPEYLALLDRLEED---GLPEYEERFKELLNENSIEFVAD 850
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
327-1112 |
5.84e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 64.75 E-value: 5.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 327 LREFASHLQQLQDALNELTEEHSRatQEWLEKQAQLekELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQE-- 404
Cdd:pfam15921 80 LEEYSHQVKDLQRRLNESNELHEK--QKFYLRQSVI--DLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHEle 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 405 -----KGEVLGDV-LQLETLKQeaatLAANNTQLQARVETLETEQGQQEAKLLAERD-----HFEEEKQQLSSLIANLQS 473
Cdd:pfam15921 156 aakclKEDMLEDSnTQIEQLRK----MMLSHEGVLQEIRSILVDFEEASGKKIYEHDsmstmHFRSLGSAISKILRELDT 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 474 SISNL---------------SQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQT 538
Cdd:pfam15921 232 EISYLkgrifpvedqlealkSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQ 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 539 LQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRER---DAALQQLEALEKEKAA 615
Cdd:pfam15921 312 NSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESgnlDDQLQKLLADLHKREK 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 616 KLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETAcreQHEAQAQvaeLEFQLQSEQQKATEKERVAQ 695
Cdd:pfam15921 392 ELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAM---KSECQGQ---MERQMAAIQGKNESLEKVSS 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 696 EKDQLQ---EQLQALKESLKVTKGSLEEEKRRAAD---ALEEQQRCISELKAETRSLveqhkqeqkeleeekagRKGLEA 769
Cdd:pfam15921 466 LTAQLEstkEMLRKVVEELTAKKMTLESSERTVSDltaSLQEKERAIEATNAEITKL-----------------RSRVDL 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 770 RLQQLGEAH---------QAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQygamfqeqlmtLKE 840
Cdd:pfam15921 529 KLQELQHLKnegdhlrnvQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQ-----------LEK 597
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 841 ECEKARQELQE---AKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVA 917
Cdd:pfam15921 598 EINDRRLELQEfkiLKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYE 677
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 918 RLETLVRKAGEQQETASRELVK---------EPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAAL 988
Cdd:pfam15921 678 VLKRNFRNKSEEMETTTNKLKMqlksaqselEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAM 757
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 989 MESQGQQ---QEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQN---ALNEQRVEFATLQEALahaltekEGK 1062
Cdd:pfam15921 758 TNANKEKhflKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANmevALDKASLQFAECQDII-------QRQ 830
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....
gi 1622865026 1063 DQELVKLRGLEAAQIKELE----ELRQTMKQLKEQLAKKEKEHASGSGAQSEAA 1112
Cdd:pfam15921 831 EQESVRLKLQHTLDVKELQgpgyTSNSSMKPRLLQPASFTRTHSNVPSSQSTAS 884
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
335-828 |
8.81e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 64.29 E-value: 8.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 335 QQLQDALNELTEEHSRATQEWLEKQAQLEKELSTALQDKKCLEEKNEILQgKLSQLEEHLALLRENPPQEKGEVLGDVLQ 414
Cdd:PRK02224 202 KDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE-ELETLEAEIEDLRETIAETEREREELAEE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 415 LETLKQEAATLAANNTQLqarVETLETEQGQQEAkLLAERDHFEEEKQQLSSLIANLQSSISNL-SQAKEELEQASQAHG 493
Cdd:PRK02224 281 VRDLRERLEELEEERDDL---LAEAGLDDADAEA-VEARREELEDRDEELRDRLEECRVAAQAHnEEAESLREDADDLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 494 --ARLTAQVASLTSELTTLNATIQQQDQELADLKQQ----------AKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLK 561
Cdd:PRK02224 357 raEELREEAAELESELEEAREAVEDRREEIEELEEEieelrerfgdAPVDLGNAEDFLEELREERDELREREAELEATLR 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 562 QKEQQLKEVAE----------KQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEK--EKAAKLEILQQQLQVANE 629
Cdd:PRK02224 437 TARERVEEAEAlleagkcpecGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEErlERAEDLVEAEDRIERLEE 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 630 TRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKE 709
Cdd:PRK02224 517 RREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRT 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 710 SLKVTKGSLEE-----EKRRAADALEEQQR-CISELKAETRSLVEQHKQEQKELEEEKagRKGLEARLQQLGEAHQAETE 783
Cdd:PRK02224 597 LLAAIADAEDEierlrEKREALAELNDERReRLAEKRERKRELEAEFDEARIEEARED--KERAEEYLEQVEEKLDELRE 674
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 784 AlRQELAEAIAAQRTAESECEQLVKEVAAWRER-------YEESQQEEAQYG 828
Cdd:PRK02224 675 E-RDDLQAEIGAVENELEELEELRERREALENRvealealYDEAEELESMYG 725
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
431-928 |
8.88e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 64.02 E-value: 8.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 431 QLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEqasqahgaRLTAQVASLTSELTTL 510
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELE--------ELEAELEELREELEKL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 511 NATIQQQD--QELADLKQQAKEEQAQLAQTLQQQEQASQgLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATA 588
Cdd:COG4717 122 EKLLQLLPlyQELEALEAELAELPERLEELEERLEELRE-LEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 589 AEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQrekAELSQKVEELRARVETACREQHE 668
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLI---AAALLALLGLGGSLLSLILTIAG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 669 AQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQAL-KESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLV 747
Cdd:COG4717 278 VLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELeEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 748 EQHKQEQkeleeekagRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAwrERYEESQQEEAQY 827
Cdd:COG4717 358 ELEEELQ---------LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEE--LLGELEELLEALD 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 828 GAMFQEQLMTLKEECEKARQELQEAKEKVAGIEshSELQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQE 907
Cdd:COG4717 427 EEELEEELEELEEELEELEEELEELREELAELE--AELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEE 504
|
490 500
....*....|....*....|.
gi 1622865026 908 KMAATSKEvaRLETLVRKAGE 928
Cdd:COG4717 505 AREEYREE--RLPPVLERASE 523
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
242-750 |
9.77e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 63.98 E-value: 9.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 242 KLLTEKDAQIAMMQQRI----DRL-ALLNEKQAASPLEPRE----LEELRDKNESLTMRLHETLKQCQDLKTE-KSQMDR 311
Cdd:pfam15921 224 KILRELDTEISYLKGRIfpveDQLeALKSESQNKIELLLQQhqdrIEQLISEHEVEITGLTEKASSARSQANSiQSQLEI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 312 KISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEwLEKQAQL-EKELSTAL-------QDKKCLEEKNEIL 383
Cdd:pfam15921 304 IQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEE-LEKQLVLaNSELTEARterdqfsQESGNLDDQLQKL 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 384 QGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETE-QGQQEAKLLAERDHfEEEKQ 462
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIQGK-NESLE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 463 QLSSLIANLQSSISNLSQAKEELE------QASQAHGARLTAQ-------VASLTSELTTLNATIQQQDQELADLK---- 525
Cdd:pfam15921 462 KVSSLTAQLESTKEMLRKVVEELTakkmtlESSERTVSDLTASlqekeraIEATNAEITKLRSRVDLKLQELQHLKnegd 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 526 --QQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKE------QQLKEVAEKQEVTRRDHAQQLATAAEEREASLR 597
Cdd:pfam15921 542 hlRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGrtagamQVEKAQLEKEINDRRLELQEFKILKDKKDAKIR 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 598 ERDAALQQLEaLEKEKA--AKLEILQQQLQVANEtRDSAQTSVTQAQREKAELSQKVEELRARVETacrEQHEAQAQVAE 675
Cdd:pfam15921 622 ELEARVSDLE-LEKVKLvnAGSERLRAVKDIKQE-RDQLLNEVKTSRNELNSLSEDYEVLKRNFRN---KSEEMETTTNK 696
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 676 LEFQLQSEQQKatekerVAQEKDQLQEQLQALKESLKVTKGSLEE--EKRRAADALEEQQRCISElkAETRSLVEQH 750
Cdd:pfam15921 697 LKMQLKSAQSE------LEQTRNTLKSMEGSDGHAMKVAMGMQKQitAKRGQIDALQSKIQFLEE--AMTNANKEKH 765
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
278-857 |
9.81e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.17 E-value: 9.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 278 LEELRDKNESLTmRLHETLKQCQDLKTE-KSQMDRKISQLLEEngdlsfKLREFASHLQQLQDALNELTEEHSRATQEWL 356
Cdd:COG4913 254 LEPIRELAERYA-AARERLAELEYLRAAlRLWFAQRRLELLEA------ELEELRAELARLEAELERLEARLDALREELD 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 357 EKQAQLE----KELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEvlgdvlqLETLKQEAATLAANNTQL 432
Cdd:COG4913 327 ELEAQIRgnggDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEE-------FAALRAEAAALLEALEEE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 433 QARVETLETEQGQQEAKLlaerdhfEEEKQQLSSLIANLQSSISNLS----QAKEELEQASQA----------------- 491
Cdd:COG4913 400 LEALEEALAEAEAALRDL-------RRELRELEAEIASLERRKSNIParllALRDALAEALGLdeaelpfvgelievrpe 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 492 ------------HGARLT--------AQVASLTSEL-TTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLR 550
Cdd:COG4913 473 eerwrgaiervlGGFALTllvppehyAAALRWVNRLhLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLE 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 551 HQVEQLSSSLK-QKEQQLKEVAE--------KQEVTRRDH----------------AQQLATAAEEREASLRERDAALQQ 605
Cdd:COG4913 553 AELGRRFDYVCvDSPEELRRHPRaitragqvKGNGTRHEKddrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEER 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 606 LEALEKEKAAkleiLQQQLQVAN--ETRDSAQTSVTQAQREKAELSQKVEELRArvetacreqheAQAQVAELEFQLqse 683
Cdd:COG4913 633 LEALEAELDA----LQERREALQrlAEYSWDEIDVASAEREIAELEAELERLDA-----------SSDDLAALEEQL--- 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 684 qqkatekERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAG 763
Cdd:COG4913 695 -------EELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVEREL 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 764 RKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEE-AQYGAMFQEQLMTLKEE- 841
Cdd:COG4913 768 RENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDGlPEYEERFKELLNENSIEf 847
|
650 660
....*....|....*....|
gi 1622865026 842 ----CEKARQELQEAKEKVA 857
Cdd:COG4913 848 vadlLSKLRRAIREIKERID 867
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1237-1657 |
1.01e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.39 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1237 LNRQVLEKEGESKELKRLVMAESEKSQKLED--RLRLLQAETASNSARAAERSSALR--EEVQSLRE--EAEKQRVASEN 1310
Cdd:PTZ00121 1072 LKPSYKDFDFDAKEDNRADEATEEAFGKAEEakKTETGKAEEARKAEEAKKKAEDARkaEEARKAEDarKAEEARKAEDA 1151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1311 LRQELTSQAERAEELGQELKAWQEKffQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREEL----- 1385
Cdd:PTZ00121 1152 KRVEIARKAEDARKAEEARKAEDAK--KAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKkaeav 1229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1386 ----EQSKQAAGGLRAELLRAQRELGELIPLRqkVAEQERTAQQLRAEKASYAEQLSM---LKKAHGLL-AEENRGLGE- 1456
Cdd:PTZ00121 1230 kkaeEAKKDAEEAKKAEEERNNEEIRKFEEAR--MAHFARRQAAIKAEEARKADELKKaeeKKKADEAKkAEEKKKADEa 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1457 --RANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQR-EAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKL 1533
Cdd:PTZ00121 1308 kkKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKaEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKA 1387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1534 --TAQVEELRKKLAD----SDQASKVQQQKLKAVQA-QGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTH 1606
Cdd:PTZ00121 1388 eeKKKADEAKKKAEEdkkkADELKKAAAAKKKADEAkKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE 1467
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1607 YDAKKQQNQELQEQLQSLEHLQKENKELRAEAErlghELQQAGLKTKEAEQ 1657
Cdd:PTZ00121 1468 EAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD----EAKKAAEAKKKADE 1514
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
305-890 |
1.73e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.40 E-value: 1.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 305 EKSQMDRKISQLLEENGDLSfKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQleKELSTALQDKKcLEEKNEILQ 384
Cdd:COG4913 219 EEPDTFEAADALVEHFDDLE-RAHEALEDAREQIELLEPIRELAERYAAARERLAEL--EYLRAALRLWF-AQRRLELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 385 GKLSQLEEHLALLREnppqekgevlgdvlQLETLKQEAATLAANNTQLQARvetLETEQGQQEAKLLAERDHFEEEKQQL 464
Cdd:COG4913 295 AELEELRAELARLEA--------------ELERLEARLDALREELDELEAQ---IRGNGGDRLEQLEREIERLERELEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 465 SSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQ 544
Cdd:COG4913 358 ERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSN 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 545 ASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRD-----------------------HAQQLATAAEEREASLR---- 597
Cdd:COG4913 438 IPARLLALRDALAEALGLDEAELPFVGELIEVRPEEerwrgaiervlggfaltllvppeHYAAALRWVNRLHLRGRlvye 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 598 ---ERDAALQQLEALEKEKAAKLEI--------LQQQLQ-------VANETR-DSAQTSVTQ------------------ 640
Cdd:COG4913 518 rvrTGLPDPERPRLDPDSLAGKLDFkphpfrawLEAELGrrfdyvcVDSPEElRRHPRAITRagqvkgngtrhekddrrr 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 641 ----------AQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKER------VAQEKDQLQEQL 704
Cdd:COG4913 598 irsryvlgfdNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDeidvasAEREIAELEAEL 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 705 QALKES------LKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAG-----RKGLEARLQQ 773
Cdd:COG4913 678 ERLDASsddlaaLEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLarlelRALLEERFAA 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 774 LGEahQAETEALRQELAEAIAAQRTAESECE-QLVKEVAAWRERYEESQQE---EAQYGAMFQEQLMTLKEEcekarqEL 849
Cdd:COG4913 758 ALG--DAVERELRENLEERIDALRARLNRAEeELERAMRAFNREWPAETADldaDLESLPEYLALLDRLEED------GL 829
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1622865026 850 QEAKEKVAgieshsELQISRQQNELVELHANLARALQQVQE 890
Cdd:COG4913 830 PEYEERFK------ELLNENSIEFVADLLSKLRRAIREIKE 864
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
220-1051 |
1.93e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.07 E-value: 1.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 220 KKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALlnEKQAASPLEPRELEELRDKNESLTMRLHETLKQC 299
Cdd:pfam02463 180 EETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEE--EYLLYLDYLKLNEERIDLLQELLRDEQEEIESSK 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 300 QDLKTEKSQMDRKISQLLEENGDLSFKLREFASHlqqlqdalnelteehsratqewLEKQAQLEKELSTALQDKKCLEEK 379
Cdd:pfam02463 258 QEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLL----------------------AKEEEELKSELLKLERRKVDDEEK 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 380 NEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAErdhfEE 459
Cdd:pfam02463 316 LKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSA----AK 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 460 EKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNA--TIQQQDQELADLKQQAKEEQAQLAQ 537
Cdd:pfam02463 392 LKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGklTEEKEELEKQELKLLKDELELKKSE 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 538 TLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKL 617
Cdd:pfam02463 472 DLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIV 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 618 EILQQQLQVanETRDSAQTSVTQAQREKAELSQ-----KVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKER 692
Cdd:pfam02463 552 EVSATADEV--EERQKLVRALTELPLGARKLRLlipklKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGIL 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 693 VAQEKDQLQEQLQALKESLK----VTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLE 768
Cdd:pfam02463 630 KDTELTKLKESAKAKESGLRkgvsLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREK 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 769 ARLQQLGEAHQaETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQE 848
Cdd:pfam02463 710 EELKKLKLEAE-ELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKV 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 849 LQEAKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGE 928
Cdd:pfam02463 789 EEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEEL 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 929 QQETASRE----LVKEPARAGDREPEWLEEQQGRQFCSTQ--AALQAMEREAEQMGNELERLRAAL-MESQGQQQEERGQ 1001
Cdd:pfam02463 869 LQELLLKEeeleEQKLKDELESKEEKEKEEKKELEEESQKlnLLEEKENEIEERIKEEAEILLKYEeEPEELLLEEADEK 948
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1002 QEREVARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFATLQEA 1051
Cdd:pfam02463 949 EKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKE 998
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
578-1429 |
2.04e-09 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 63.05 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 578 RRDHAQQLATAAEEREASLRERDAALQQLEALEKE---KAAKLEILQQQLQVANETRDSAQTSVtqAQREKAELSQK-VE 653
Cdd:COG3096 280 RRELSERALELRRELFGARRQLAEEQYRLVEMAREleeLSARESDLEQDYQAASDHLNLVQTAL--RQQEKIERYQEdLE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 654 ELRARVEtacreqhEAQAQVAELEFQLQSEQqkaTEKERVAQEKDQLQEQLQALKESLkvtkgslEEEKRRA------AD 727
Cdd:COG3096 358 ELTERLE-------EQEEVVEEAAEQLAEAE---ARLEAAEEEVDSLKSQLADYQQAL-------DVQQTRAiqyqqaVQ 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 728 ALEEQQRC--ISELKAEtrslveqhkqeqkeleeekagrkGLEARLQQLGEAHQAETE---ALRQELAEAIAAQRTAEsE 802
Cdd:COG3096 421 ALEKARALcgLPDLTPE-----------------------NAEDYLAAFRAKEQQATEevlELEQKLSVADAARRQFE-K 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 803 CEQLVKEVAAWRERYEESQQeeaqygamfqeqlmtlkeecekARQELQEAKEKVAGIESHSelQISRQQNELVELHANLA 882
Cdd:COG3096 477 AYELVCKIAGEVERSQAWQT----------------------ARELLRRYRSQQALAQRLQ--QLRAQLAELEQRLRQQQ 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 883 RALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARA---GDREPEW-------- 951
Cdd:COG3096 533 NAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIkelAARAPAWlaaqdale 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 952 -LEEQQGRQFCSTQAALQAM------EREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERG-----RAQAD 1019
Cdd:COG3096 613 rLREQSGEALADSQEVTAAMqqllerEREATVERDELAARKQALESQIERLSQPGGAEDPRLLALAERLGgvllsEIYDD 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1020 LALEKAAkaELEMRLQNA--------LNEQRVEFATLQEAL--------------AHALTEKEGKDQELVKLRGLE---- 1073
Cdd:COG3096 693 VTLEDAP--YFSALYGPArhaivvpdLSAVKEQLAGLEDCPedlyliegdpdsfdDSVFDAEELEDAVVVKLSDRQwrys 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1074 ----------AAQIKELEELRQTMKQLKEQLA-------KKEKEHASGS---GAQSEAAGRTEPTgPKLEALRAEVSKle 1133
Cdd:COG3096 771 rfpevplfgrAAREKRLEELRAERDELAEQYAkasfdvqKLQRLHQAFSqfvGGHLAVAFAPDPE-AELAALRQRRSE-- 847
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1134 qqcqqqqeqadsLERSLEAERASRAERDSALETLQGQLEEKARELGHSqSALAsvQRELAALRTKVQDHSKAEDEWKAQV 1213
Cdd:COG3096 848 ------------LERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQA-NLLA--DETLADRLEELREELDAAQEAQAFI 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1214 ARGRQEAERKNSLISSLE---EEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEdrlrllqAETASNSARAAERSSAL 1290
Cdd:COG3096 913 QQHGKALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRP-------HFSYEDAVGLLGENSDL 985
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1291 REEVQSLREEAEKQRvasenlrqeltsqaeraEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPA-KHLCQQ 1369
Cdd:COG3096 986 NEKLRARLEQAEEAR-----------------REAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQElEELGVQ 1048
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1370 LQAEQAAAEKRHREELEQSKQAAGGLRAELLRA-QRELGELIPLRQKVAEQERTAQQLRAE 1429
Cdd:COG3096 1049 ADAEAEERARIRRDELHEELSQNRSRRSQLEKQlTRCEAEMDSLQKRLRKAERDYKQEREQ 1109
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
215-746 |
2.14e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 62.75 E-value: 2.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRklltEKDAQIAMMQQRIDRLallNEKQAASPlepRELEELRDKNESLTMRLHE 294
Cdd:PRK02224 221 EIERYEEQREQARETRDEADEVLEEHE----ERREELETLEAEIEDL---RETIAETE---REREELAEEVRDLRERLEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 295 TLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRAT----------QEWLEKQAQLEK 364
Cdd:PRK02224 291 LEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRedaddleeraEELREEAAELES 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 365 ELSTALQDKKCLEEKNEILQGKLSQLEE--------------HLALLREnppqEKGEVLGDVLQLETLKQEAATLAANNT 430
Cdd:PRK02224 371 ELEEAREAVEDRREEIEELEEEIEELRErfgdapvdlgnaedFLEELRE----ERDELREREAELEATLRTARERVEEAE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 431 QLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHgarltAQVASLTSELTTL 510
Cdd:PRK02224 447 ALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAE-----DRIERLEERREDL 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 511 NATIQQQDQELADLKQQAKEeqaqlaqtlqqqeqasqgLRHQVEQLSSSLKQKEqqlkEVAEKQEVTRRDHAQQLATAAE 590
Cdd:PRK02224 522 EELIAERRETIEEKRERAEE------------------LRERAAELEAEAEEKR----EAAAEAEEEAEEAREEVAELNS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 591 EREaslrERDAALQQLEALEkEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQ 670
Cdd:PRK02224 580 KLA----ELKERIESLERIR-TLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEARED 654
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 671 AQVAElefqlqSEQQKATEK-ERVAQEKDQLQEQLQALKESLKvtkgSLEEEKRRaADALEEQQRCISELKAETRSL 746
Cdd:PRK02224 655 KERAE------EYLEQVEEKlDELREERDDLQAEIGAVENELE----ELEELRER-REALENRVEALEALYDEAEEL 720
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1075-1648 |
2.53e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.63 E-value: 2.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1075 AQIKELEELRQTMKQLKEQLAKkekehasgsgaqseaagrteptgpkLEALRAEVSKLEQQCQQQQEqADSLERSLEAER 1154
Cdd:COG4913 232 EHFDDLERAHEALEDAREQIEL-------------------------LEPIRELAERYAAARERLAE-LEYLRAALRLWF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1155 ASR--AERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHS-KAEDEWKAQVARGRQEAERKNSLISSLE 1231
Cdd:COG4913 286 AQRrlELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERERRRARLE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1232 EEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENL 1311
Cdd:COG4913 366 ALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1312 RQELTSQAERAE----------ELGQELKAWQEKFfqkEQALSTLQL------EHtstQALVSELLPAKHLcqqLQAEQA 1375
Cdd:COG4913 446 RDALAEALGLDEaelpfvgeliEVRPEEERWRGAI---ERVLGGFALtllvppEH---YAAALRWVNRLHL---RGRLVY 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1376 AAEKRHREELEQSKQAAGGLRAELL--------RAQRELGELIPLRqKVAeqerTAQQLRAEKASYAEQlSMLKKAHGLL 1447
Cdd:COG4913 517 ERVRTGLPDPERPRLDPDSLAGKLDfkphpfraWLEAELGRRFDYV-CVD----SPEELRRHPRAITRA-GQVKGNGTRH 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1448 A-EENRGLGERANLG------RQFLEVELDQAREKY------VQELAAVRADAETRLAEVQREAQSTARELEVMTAKyeg 1514
Cdd:COG4913 591 EkDDRRRIRSRYVLGfdnrakLAALEAELAELEEELaeaeerLEALEAELDALQERREALQRLAEYSWDEIDVASAE--- 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1515 akvkvlEERQRFQEEKQKLTA---QVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQ 1591
Cdd:COG4913 668 ------REIAELEAELERLDAssdDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 1592 AAEHYKLQmekaktHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQA 1648
Cdd:COG4913 742 LARLELRA------LLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERA 792
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
772-1329 |
2.97e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.63 E-value: 2.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 772 QQLGEAHQAETEALRQ--------ELAEAIAAQRTAESECEQLVKEVAAWR--ERYEESQQEEAQygamFQEQLMTLKEE 841
Cdd:COG4913 235 DDLERAHEALEDAREQiellepirELAERYAAARERLAELEYLRAALRLWFaqRRLELLEAELEE----LRAELARLEAE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 842 CEKARQELQEAKEKVAgieshsELQISRQQN---ELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVAR 918
Cdd:COG4913 311 LERLEARLDALREELD------ELEAQIRGNggdRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 919 LETLVRKAGEQQETASRELVKEPARAGDREpewleEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALmesqGQQQEE 998
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALAEAEAAL-----RDLRRELRELEAEIASLERRKSNIPARLLALRDAL----AEALGL 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 999 RGQQEREVA-----RLTQERGRAQADLAL-------------EKAAKAELE-MRLQNALNEQRVEFATLQEA-------- 1051
Cdd:COG4913 456 DEAELPFVGelievRPEEERWRGAIERVLggfaltllvppehYAAALRWVNrLHLRGRLVYERVRTGLPDPErprldpds 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1052 LAHALTEKEGKDQELVK---LRGLEAAQIKELEELRQT---------MKQLKEQLAKKEKEHASGS---GAQSEAagrte 1116
Cdd:COG4913 536 LAGKLDFKPHPFRAWLEaelGRRFDYVCVDSPEELRRHpraitragqVKGNGTRHEKDDRRRIRSRyvlGFDNRA----- 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1117 ptgpKLEALRAEVSKLEQQCQQqqeqADSLERSLEAERASRAERDSALETLQGQLEEkarelghsQSALASVQRELAALR 1196
Cdd:COG4913 611 ----KLAALEAELAELEEELAE----AEERLEALEAELDALQERREALQRLAEYSWD--------EIDVASAEREIAELE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1197 TKvqdhskaedewkaqvargRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAET 1276
Cdd:COG4913 675 AE------------------LERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRL 736
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 1277 ASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQEL 1329
Cdd:COG4913 737 EAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
391-806 |
3.00e-09 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 62.66 E-value: 3.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 391 EEHLALLREnppqekgevlgdvlQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDhfEEEKQQLSSLIAN 470
Cdd:COG3096 784 EKRLEELRA--------------ERDELAEQYAKASFDVQKLQRLHQAFSQFVGGHLAVAFAPDP--EAELAALRQRRSE 847
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 471 LQSSISNLSQAKEELEQASQAHGARLtAQVASLTSELTTLNatiqqqDQELADLKQQAKEEQAQLAQTLQQQEQASQGLR 550
Cdd:COG3096 848 LERELAQHRAQEQQLRQQLDQLKEQL-QLLNKLLPQANLLA------DETLADRLEELREELDAAQEAQAFIQQHGKALA 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 551 hQVEQLSSSLKQKEQQLKEVaeKQEVTRRDHAQQLATAAEEREASLRERDAAL--QQLEALEKEKAAKLEILQQQLQVAN 628
Cdd:COG3096 921 -QLEPLVAVLQSDPEQFEQL--QADYLQAKEQQRRLKQQIFALSEVVQRRPHFsyEDAVGLLGENSDLNEKLRARLEQAE 997
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 629 ETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQkatekERVAQEKDQLQEQLQAL- 707
Cdd:COG3096 998 EARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEELGVQADAEAE-----ERARIRRDELHEELSQNr 1072
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 708 --KESLKVTKGSLEEEKRRAADALEEQQRcisELKAEtRSLVEQHKQEQKELEEEKAGRkGLEARLQQLGEAHQaETEAL 785
Cdd:COG3096 1073 srRSQLEKQLTRCEAEMDSLQKRLRKAER---DYKQE-REQVVQAKAGWCAVLRLARDN-DVERRLHRRELAYL-SADEL 1146
|
410 420
....*....|....*....|.
gi 1622865026 786 RQELAEAIAAQRTAESECEQL 806
Cdd:COG3096 1147 RSMSDKALGALRLAVADNEHL 1167
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
414-990 |
4.93e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.85 E-value: 4.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 414 QLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAER-DHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAH 492
Cdd:COG4913 256 PIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAElEELRAELARLEAELERLEARLDALREELDELEAQIRGN 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 493 GARltaQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqtlqqqeqasqgLRHQVEQLSSSLKQKEQQLKEVAE 572
Cdd:COG4913 336 GGD---RLEQLEREIERLERELEERERRRARLEALLAA------------------LGLPLPASAEEFAALRAEAAALLE 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 573 KQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEK---AAKLEILQQQLqvanetrdSAQTSVTQAQ-REKAEL 648
Cdd:COG4913 395 ALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsniPARLLALRDAL--------AEALGLDEAElPFVGEL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 649 SQ-KVEELRAR--VETACR---------EQHEAQAQVA------ELEFQLQSEQQKATEKERVAQEKDQLQEQLqalkeS 710
Cdd:COG4913 467 IEvRPEEERWRgaIERVLGgfaltllvpPEHYAAALRWvnrlhlRGRLVYERVRTGLPDPERPRLDPDSLAGKL-----D 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 711 LKVTK--GSLEEEKRRAADAleeqqRC---ISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLqQLGEAHQAETEAL 785
Cdd:COG4913 542 FKPHPfrAWLEAELGRRFDY-----VCvdsPEELRRHPRAITRAGQVKGNGTRHEKDDRRRIRSRY-VLGFDNRAKLAAL 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 786 RQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQeeaqygamfqeqlmtlkeecekaRQELQEAKEKVAGIEShsel 865
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQERREALQR-----------------------LAEYSWDEIDVASAER---- 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 866 QISRQQNELVELHAN---LARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPA 942
Cdd:COG4913 669 EIAELEAELERLDASsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR 748
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1622865026 943 RAGDrepEWLEEQQGRQfcSTQAALQAMEREAEQMGNELERLRAALME 990
Cdd:COG4913 749 ALLE---ERFAAALGDA--VERELRENLEERIDALRARLNRAEEELER 791
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
276-725 |
9.51e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 60.55 E-value: 9.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 276 RELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKISQL--LEENGDLSFKLREFASHLQQLQDALNELTEEHsratQ 353
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLekLLQLLPLYQELEALEAELAELPERLEELEERL----E 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 354 EWLEKQAQLEKelstalqdkkcleekneiLQGKLSQLEEHLA-LLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQL 432
Cdd:COG4717 157 ELRELEEELEE------------------LEAELAELQEELEeLLEQLSLATEEELQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 433 QARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNA 512
Cdd:COG4717 219 QEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 513 TIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQ-----LAT 587
Cdd:COG4717 299 SLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQeiaalLAE 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 588 AAEEREASLRERDAALQQLEALEKEKAAkleiLQQQLQVANETRDSAqtsvtQAQREKAELSQKVEELRARVETACREQH 667
Cdd:COG4717 379 AGVEDEEELRAALEQAEEYQELKEELEE----LEEQLEELLGELEEL-----LEALDEEELEEELEELEEELEELEEELE 449
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 668 EAQAQVAELEFQLQsEQQKATEKERVAQEKDQLQEQLQALKE---SLKVTKGSLEEEKRRA 725
Cdd:COG4717 450 ELREELAELEAELE-QLEEDGELAELLQELEELKAELRELAEewaALKLALELLEEAREEY 509
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1008-1331 |
1.41e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1008 RLTQERGRAQADLALEKAAKAELEMRLQnALNEQRVEFATLQEALAHALTEKEGKDQELVKLR----------------- 1070
Cdd:PRK02224 224 RYEEQREQARETRDEADEVLEEHEERRE-ELETLEAEIEDLRETIAETEREREELAEEVRDLRerleeleeerddllaea 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1071 GLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAgrteptgpklEALRAEVSKLEQQCQQQQEQADSLERSL 1150
Cdd:PRK02224 303 GLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEA----------ESLREDADDLEERAEELREEAAELESEL 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1151 EAERASRAERDSALETLQGQLEEKAR-------ELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQ----- 1218
Cdd:PRK02224 373 EEAREAVEDRREEIEELEEEIEELRErfgdapvDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleag 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1219 ----------------EAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRL--LQAETASNS 1280
Cdd:PRK02224 453 kcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLeeLIAERRETI 532
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1281 ARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKA 1331
Cdd:PRK02224 533 EEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAE 583
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
291-857 |
2.17e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.69 E-value: 2.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 291 RLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELteehsratQEWLEKQAQLEKELSTAL 370
Cdd:PRK03918 180 RLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL--------EELKEEIEELEKELESLE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 371 QDKKCLEEKNEILQGKLSQLEEHLALLRENpPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLEtEQGQQEAKL 450
Cdd:PRK03918 252 GSKRKLEEKIRELEERIEELKKEIEELEEK-VKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLE-EEINGIEER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 451 LAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQahgarLTAQVASLTSELTTLN-ATIQQQDQELADLKQQAK 529
Cdd:PRK03918 330 IKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKA-----KKEELERLKKRLTGLTpEKLEKELEELEKAKEEIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 530 EEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQ--------KEQQLKEVAEKQEVTRRDHAQQLATaAEEREASLRERDA 601
Cdd:PRK03918 405 EEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgrelTEEHRKELLEEYTAELKRIEKELKE-IEEKERKLRKELR 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 602 ALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEfqlQ 681
Cdd:PRK03918 484 ELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA---E 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 682 SEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRR---AADALEEQQRCISELKAETRSLVEQHKQEQKELE 758
Cdd:PRK03918 561 LEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEyleLKDAEKELEREEKELKKLEEELDKAFEELAETEK 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 759 EEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYgamfQEQLmtl 838
Cdd:PRK03918 641 RLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA----KKEL--- 713
|
570
....*....|....*....
gi 1622865026 839 kEECEKARQELQEAKEKVA 857
Cdd:PRK03918 714 -EKLEKALERVEELREKVK 731
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
215-745 |
2.23e-08 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 59.37 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADE-RSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPRELEELRDKN-ESLTMRL 292
Cdd:pfam05557 13 QLQNEKKQMELEhKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYlEALNKKL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 293 HETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLeKELSTALQD 372
Cdd:pfam05557 93 NEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQ-SSLAEAEQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 373 KKCLEEKNeilqgklsQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAA---TLAANNTQLQARVETLETEQGQQE-- 447
Cdd:pfam05557 172 IKELEFEI--------QSQEQDSEIVKNSKSELARIPELEKELERLREHNKhlnENIENKLLLKEEVEDLKRKLEREEky 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 448 ----AKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGArLTAQVASLTSELTTLNATIQQQDQELAD 523
Cdd:pfam05557 244 reeaATLELEKEKLEQELQSWVKLAQDTGLNLRSPEDLSRRIEQLQQREIV-LKEENSSLTSSARQLEKARRELEQELAQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 524 LKQQAKEEQAQLAQTLQQQEQASQ----------GLRHQVEQLSSSLKQKEQQLKEVAEKQEVTrrDHAQQLATAAEERE 593
Cdd:pfam05557 323 YLKKIEDLNKKLKRHKALVRRLQRrvllltkerdGYRAILESYDKELTMSNYSPQLLERIEEAE--DMTQKMQAHNEEME 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 594 ASL----RERDAALQQLEALEKEkaakLEILQQQLQVANetrdsaqtsVTQAQREKAELSQKVEELRARVETACREQHEA 669
Cdd:pfam05557 401 AQLsvaeEELGGYKQQAQTLERE----LQALRQQESLAD---------PSYSKEEVDSLRRKLETLELERQRLREQKNEL 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 670 QAQVAELEFQLQSEQQK-----------ATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISE 738
Cdd:pfam05557 468 EMELERRCLQGDYDPKKtkvlhlsmnpaAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLD 547
|
....*..
gi 1622865026 739 LKAETRS 745
Cdd:pfam05557 548 LRKELES 554
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1060-1640 |
2.89e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 2.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1060 EGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQ 1139
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1140 QeqadslerSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAE---DEWKAQVARG 1216
Cdd:PRK03918 241 E--------ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSefyEEYLDELREI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1217 RQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLV--MAESEKSQKLEDRLRLLQAETASNSARAAERS------- 1287
Cdd:PRK03918 313 EKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEkrLEELEERHELYEEAKAKKEELERLKKRLTGLTpekleke 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1288 ---------------SALREEVQSLREEAEKQRVASENLR----------QELTSQ--AERAEELGQELKAWQEKFFQKE 1340
Cdd:PRK03918 393 leelekakeeieeeiSKITARIGELKKEIKELKKAIEELKkakgkcpvcgRELTEEhrKELLEEYTAELKRIEKELKEIE 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1341 QALSTLQLEHTSTQALV---SELLPAKHLCQQLQAEQAAAEKRHREELEQS-------KQAAGGLRAELLRAQRELGELI 1410
Cdd:PRK03918 473 EKERKLRKELRELEKVLkkeSELIKLKELAEQLKELEEKLKKYNLEELEKKaeeyeklKEKLIKLKGEIKSLKKELEKLE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1411 PLRQKVAEQERTAQQLRAEKASYAEQLSmlKKAHGLLAEENRGLGERANLGRQFLEVEldqarekyvqelaavraDAETR 1490
Cdd:PRK03918 553 ELKKKLAELEKKLDELEEELAELLKELE--ELGFESVEELEERLKELEPFYNEYLELK-----------------DAEKE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1491 LAEVQREAQSTARELEvmtakyegakvKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKlkavqaqggESQQ 1570
Cdd:PRK03918 614 LEREEKELKKLEEELD-----------KAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYL---------ELSR 673
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1571 EAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKThydaKKQQNQELQEQLQSLEHLQKENKELRAEAER 1640
Cdd:PRK03918 674 ELAGLRAELEELEKRREEIKKTLEKLKEELEEREK----AKKELEKLEKALERVEELREKVKKYKALLKE 739
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
334-781 |
4.08e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.63 E-value: 4.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 334 LQQLQDALNELTEEHSRATQEWLEKQAQLEKELSTALQDKKCLEEkneiLQGKLSQLEEHLALLRENPPQEKGEV--LGD 411
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAE----LQEELEELEEELEELEAELEELREELekLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 412 VLQLETLKQEAATLAANNTQLQARVETLEtEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNlsQAKEELEQASQA 491
Cdd:COG4717 124 LLQLLPLYQELEALEAELAELPERLEELE-ERLEELRELEEELEELEAELAELQEELEELLEQLSL--ATEEELQDLAEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 492 HgARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVA 571
Cdd:COG4717 201 L-EELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 572 --------------EKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTS 637
Cdd:COG4717 280 flvlgllallflllAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 638 VTQAQREKAELSQK----------VEELRARVEtACREQHEAQAQVAELEFQLQS------EQQKATEKERVAQEKDQLQ 701
Cdd:COG4717 360 EEELQLEELEQEIAallaeagvedEEELRAALE-QAEEYQELKEELEELEEQLEEllgeleELLEALDEEELEEELEELE 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 702 EQLQALKESLKvtkgSLEEEKRRAADALE--EQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQ 779
Cdd:COG4717 439 EELEELEEELE----ELREELAELEAELEqlEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
..
gi 1622865026 780 AE 781
Cdd:COG4717 515 PP 516
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
598-990 |
4.11e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 58.82 E-value: 4.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 598 ERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELrARVETACREQHE---AQAQVA 674
Cdd:PRK04863 280 ERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKierYQADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 675 ELEFQLQsEQQKATEKerVAQEKDQLQEQLQALKESLKVTKGSLEEEKRraadALEEQQrciselkaeTRSLVEQHKQEQ 754
Cdd:PRK04863 359 ELEERLE-EQNEVVEE--ADEQQEENEARAEAAEEEVDELKSQLADYQQ----ALDVQQ---------TRAIQYQQAVQA 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 755 KELEEEKAGR-----KGLEARLQQLGEAHQAETEALRQ-----ELAEAIAAQRTaesECEQLVKEVAAWRERyeesqqEE 824
Cdd:PRK04863 423 LERAKQLCGLpdltaDNAEDWLEEFQAKEQEATEELLSleqklSVAQAAHSQFE---QAYQLVRKIAGEVSR------SE 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 825 AQYGAmfqeqlmtlKEECEKARQELQEAkEKVAGIES-HSEL-QISRQQNELVELHANLARALQQVQEKEVRAQKLADDL 902
Cdd:PRK04863 494 AWDVA---------RELLRRLREQRHLA-EQLQQLRMrLSELeQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEEL 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 903 STLQEKMAATSKEVARLETLVRKAGEQQETASRELVKeparagdREPEWLE-----EQQGRQFCSTQAALQAMEreaEQM 977
Cdd:PRK04863 564 EARLESLSESVSEARERRMALRQQLEQLQARIQRLAA-------RAPAWLAaqdalARLREQSGEEFEDSQDVT---EYM 633
|
410
....*....|...
gi 1622865026 978 GNELERLRAALME 990
Cdd:PRK04863 634 QQLLERERELTVE 646
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
443-678 |
7.43e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.08 E-value: 7.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 443 QGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASqahgARLTAQVASLTSELTTLNATIQQQDQELA 522
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRI----AALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 523 DLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVtRRDHAQQLATAAEEREASLRERDAA 602
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPA-RREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 603 LQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEF 678
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGF 248
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
431-840 |
8.56e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 57.66 E-value: 8.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 431 QLQARVETLETEQgqqeAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQahGARLTAQVASLTSELTTL 510
Cdd:PRK04863 294 ELYTSRRQLAAEQ----YRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEK--IERYQADLEELEERLEEQ 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 511 NATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLrhqveqlssslkqKEQQLKEVAEKQEVTRRDHAQQLATAAE 590
Cdd:PRK04863 368 NEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQAL-------------DVQQTRAIQYQQAVQALERAKQLCGLPD 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 591 EREASLRERdaaLQQLEALEKEKAAKLEILQQQLQVANETRD------------SAQTSVTQAQREKAELSQKVEELRAR 658
Cdd:PRK04863 435 LTADNAEDW---LEEFQAKEQEATEELLSLEQKLSVAQAAHSqfeqayqlvrkiAGEVSRSEAWDVARELLRRLREQRHL 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 659 VETAcreqHEAQAQVAELEFQLQSEQ---QKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRC 735
Cdd:PRK04863 512 AEQL----QQLRMRLSELEQRLRQQQraeRLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQ 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 736 ISELKAETRSLVEQHKQEQKeleeekagrkgLEARLQQLGEaHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRE 815
Cdd:PRK04863 588 LEQLQARIQRLAARAPAWLA-----------AQDALARLRE-QSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQ 655
|
410 420
....*....|....*....|....*
gi 1622865026 816 RYEESQQEEAQYGAMFQEQLMTLKE 840
Cdd:PRK04863 656 ALDEEIERLSQPGGSEDPRLNALAE 680
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
216-530 |
1.37e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.95 E-value: 1.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 216 MRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAasplepRELEELRDKNESLTMRLHET 295
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQ------RELEEKQNEIEKLKKENQSY 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 296 LKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEW--LEKQ-AQLEKELSTALQD 372
Cdd:TIGR04523 383 KQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIkdLTNQdSVKELIIKNLDNT 462
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 373 KKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLA 452
Cdd:TIGR04523 463 RESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISD 542
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 453 -----ERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQAS---QAHGARLTAQVASLTSELTTLNATIQQQDQELADL 524
Cdd:TIGR04523 543 ledelNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQeekQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKA 622
|
....*.
gi 1622865026 525 KQQAKE 530
Cdd:TIGR04523 623 KKENEK 628
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1239-1678 |
1.41e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1239 RQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAE-TASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTS 1317
Cdd:COG4913 241 HEALEDAREQIELLEPIRELAERYAAARERLAELEYLrAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1318 QAERAEEL--------GQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELlpakhlcQQLQAEQAAAEKRHREELEQSK 1389
Cdd:COG4913 321 LREELDELeaqirgngGDRLEQLEREIERLERELEERERRRARLEALLAAL-------GLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1390 QAAGGLRAELLRAQRELG-ELIPLRQKVAEQERTAQQLRAEKASYAEQL----SMLKKAHGLLAEENRGLGEranlgrqF 1464
Cdd:COG4913 394 EALEEELEALEEALAEAEaALRDLRRELRELEAEIASLERRKSNIPARLlalrDALAEALGLDEAELPFVGE-------L 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1465 LEVELDQAR--------------------EKYVQELAAVRA----------DAETRLAEVQR---EAQSTARELEVMTAK 1511
Cdd:COG4913 467 IEVRPEEERwrgaiervlggfaltllvppEHYAAALRWVNRlhlrgrlvyeRVRTGLPDPERprlDPDSLAGKLDFKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1512 YEGAKVKVLEER---------QRFQEE----------KQKLTAQVEELRKKLA-------DSDQASKVQQQKLKAVQAQG 1565
Cdd:COG4913 547 FRAWLEAELGRRfdyvcvdspEELRRHpraitragqvKGNGTRHEKDDRRRIRsryvlgfDNRAKLAALEAELAELEEEL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1566 GESQQEAQRLQARLNELQAQLSQKEQAAEH--YKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGH 1643
Cdd:COG4913 627 AEAEERLEALEAELDALQERREALQRLAEYswDEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEE 706
|
490 500 510
....*....|....*....|....*....|....*
gi 1622865026 1644 ELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQ 1678
Cdd:COG4913 707 ELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
213-734 |
1.51e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 213 QFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRlallNEKQAASPLEpRELEELRDKNESLTMRL 292
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRG----NGGDRLEQLE-REIERLERELEERERRR 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 293 HETLKQCQDLKteksqmdrkisqlLEENGDLSfklrEFASHLQQLQDALNELTEEHSRATQEwlekQAQLEKELSTALQD 372
Cdd:COG4913 362 ARLEALLAALG-------------LPLPASAE----EFAALRAEAAALLEALEEELEALEEA----LAEAEAALRDLRRE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 373 KKCLEEKNEILQGKLSQLEEHLALLRE------NPPQEKGEVLGDVLQLETL-----------------------KQEAA 423
Cdd:COG4913 421 LRELEAEIASLERRKSNIPARLLALRDalaealGLDEAELPFVGELIEVRPEeerwrgaiervlggfaltllvppEHYAA 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 424 TLAA-NNTQLQARVETLETEQGQQEAKLLAERDHfeeekqqlsSLIANLQSSISNLSQ-AKEELEQASQAHGARLTAQVA 501
Cdd:COG4913 501 ALRWvNRLHLRGRLVYERVRTGLPDPERPRLDPD---------SLAGKLDFKPHPFRAwLEAELGRRFDYVCVDSPEELR 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 502 ----SLTSE-LTTLNATIQQQD----------------QELADLKQQAKEeqaqlaqtlqqqeqasqgLRHQVEQLSSSL 560
Cdd:COG4913 572 rhprAITRAgQVKGNGTRHEKDdrrrirsryvlgfdnrAKLAALEAELAE------------------LEEELAEAEERL 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 561 KQKEQQLKEVAEkqevtRRDHAQQLATAAEER---EASLRERDAALQQLEALEKEKaAKLEILQQQLQVANETRDSAQTS 637
Cdd:COG4913 634 EALEAELDALQE-----RREALQRLAEYSWDEidvASAEREIAELEAELERLDASS-DDLAALEEQLEELEAELEELEEE 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 638 VTQAQREKAELSQKVEELRARVEtACREQHEA--QAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQAlkeslkvtk 715
Cdd:COG4913 708 LDELKGEIGRLEKELEQAEEELD-ELQDRLEAaeDLARLELRALLEERFAAALGDAVERELRENLEERIDA--------- 777
|
570
....*....|....*....
gi 1622865026 716 gsLEEEKRRAADALEEQQR 734
Cdd:COG4913 778 --LRARLNRAEEELERAMR 794
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1122-1598 |
1.69e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1122 LEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELghsqsalASVQRELAALRTKVQD 1201
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL-------EELEAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1202 HSKAEDEWKAqvargRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSA 1281
Cdd:COG4717 121 LEKLLQLLPL-----YQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1282 RAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQA-LSTLQLEHTSTQALVSEL 1360
Cdd:COG4717 196 DLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAaLLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1361 LPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAellraqrelgeliplrQKVAEQERTAQQLRAEKASYAEQLSML 1440
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPA----------------LEELEEEELEELLAALGLPPDLSPEEL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1441 KKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVL 1520
Cdd:COG4717 340 LELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1521 EERQRFQEEkqKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGG--ESQQEAQRLQARLNELQAQLSQKEQAAEHYKL 1598
Cdd:COG4717 420 ELLEALDEE--ELEEELEELEEELEELEEELEELREELAELEAELEqlEEDGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
215-707 |
1.72e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASplepRELEELRDKNESLTMRLHE 294
Cdd:COG4717 82 EAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALE----AELAELPERLEELEERLEE 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 295 TlkqcQDLKTEKSQMDRKISQLleengdlsfklrefashLQQLQDALNELTEEHSRATQEWLEKQAQLEKELSTALQDKK 374
Cdd:COG4717 158 L----RELEEELEELEAELAEL-----------------QEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 375 CLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLetlkqeAATLAANNTQLQARVETLETEQGQQEAKLLAER 454
Cdd:COG4717 217 EAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAA------LLALLGLGGSLLSLILTIAGVLFLVLGLLALLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 455 DHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLnATIQQQDQELADLKQQAKEEQAQ 534
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRI-EELQELLREAEELEEELQLEELE 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 535 LAQTLQQQEQASQGLrhqvEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKA 614
Cdd:COG4717 370 QEIAALLAEAGVEDE----EELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELE 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 615 AKLEILQQQLQvanetRDSAQTSVTQAQREKAELSQKVEELRARVETACREqheaqAQVAELEFQLQSEQQKATEKERVA 694
Cdd:COG4717 446 EELEELREELA-----ELEAELEQLEEDGELAELLQELEELKAELRELAEE-----WAALKLALELLEEAREEYREERLP 515
|
490
....*....|...
gi 1622865026 695 QEKDQLQEQLQAL 707
Cdd:COG4717 516 PVLERASEYFSRL 528
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
582-816 |
1.74e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 582 AQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVET 661
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 662 ACREQHEAQAQVAELEFQLQS-----------EQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALE 730
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 731 EQQRCISELKAETRSLveqhkqeqkelEEEKAGRKGLEARLQQlgeahqaETEALRQELAEAIAAQRTAESECEQLVKEV 810
Cdd:COG4942 175 ELEALLAELEEERAAL-----------EALKAERQKLLARLEK-------ELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*.
gi 1622865026 811 AAWRER 816
Cdd:COG4942 237 AAAAER 242
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1276-1673 |
3.27e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 56.12 E-value: 3.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1276 TASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFfQKEQALSTLQLEHTSTQA 1355
Cdd:PRK04863 277 HANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIERYQA 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1356 LVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELiplrQKVAEQERTAQQL--RAEKASY 1433
Cdd:PRK04863 356 DLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQ----QTRAIQYQQAVQAleRAKQLCG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1434 AEQLSmLKKAHGLLAE---ENRGLGERANLGRQFLEVElDQAREKYVQELAAVRADAetrlAEVQR-EAQSTARELEVMT 1509
Cdd:PRK04863 432 LPDLT-ADNAEDWLEEfqaKEQEATEELLSLEQKLSVA-QAAHSQFEQAYQLVRKIA----GEVSRsEAWDVARELLRRL 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1510 AKYEGAKVKVLEERQRFQEEKQKLTAQ--VEELRkkladsDQASKVQQQKLKAVQaqggESQQEAQRLQARLNELQAQLS 1587
Cdd:PRK04863 506 REQRHLAEQLQQLRMRLSELEQRLRQQqrAERLL------AEFCKRLGKNLDDED----ELEQLQEELEARLESLSESVS 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1588 QKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVR 1667
Cdd:PRK04863 576 EARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQ 655
|
....*.
gi 1622865026 1668 SLEAQV 1673
Cdd:PRK04863 656 ALDEEI 661
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
447-840 |
3.71e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 55.73 E-value: 3.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 447 EAKLLAERDHFEEEKQQLSS--LIANLQSSISNLSQAKEELEQASQA---------HGARLTAQVASLTSELTTLNATIQ 515
Cdd:COG3096 285 ERALELRRELFGARRQLAEEqyRLVEMARELEELSARESDLEQDYQAasdhlnlvqTALRQQEKIERYQEDLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 516 QQDQELAdlkqQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKqkEQQLKEVAEKQEVTRRDHAQQLATAAEEREAS 595
Cdd:COG3096 365 EQEEVVE----EAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALD--VQQTRAIQYQQAVQALEKARALCGLPDLTPEN 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 596 LRERdaaLQQLEALEKEKAAKLEILQQQLQVANE-------------------TRDSAQTSVTQAQREKAE---LSQKVE 653
Cdd:COG3096 439 AEDY---LAAFRAKEQQATEEVLELEQKLSVADAarrqfekayelvckiagevERSQAWQTARELLRRYRSqqaLAQRLQ 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 654 ELRAR---VETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQlqalkeslkvtkgsleeekrraadaLE 730
Cdd:COG3096 516 QLRAQlaeLEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEE-------------------------LE 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 731 EQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEaHQAETEALRQELAEAIAAQRTAESECEQLVKEV 810
Cdd:COG3096 571 EQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLRE-QSGEALADSQEVTAAMQQLLEREREATVERDEL 649
|
410 420 430
....*....|....*....|....*....|
gi 1622865026 811 AAWRERYEESQQEEAQYGAMFQEQLMTLKE 840
Cdd:COG3096 650 AARKQALESQIERLSQPGGAEDPRLLALAE 679
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
220-480 |
4.72e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 4.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 220 KKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQridrlallnEKQaaspLEPRELEELRDKNESLTMRLHETLKQC 299
Cdd:TIGR04523 383 KQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQ---------EKE----LLEKEIERLKETIIKNNSEIKDLTNQD 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 300 QDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHS---RATQEWLEKQAQLEKELSTALQDKKCL 376
Cdd:TIGR04523 450 SVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKklnEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 377 E-EKNEILQgKLSQLEEHLALLRENPPQE--KGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQ---------- 443
Cdd:TIGR04523 530 EsEKKEKES-KISDLEDELNKDDFELKKEnlEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKkdlikeieek 608
|
250 260 270
....*....|....*....|....*....|....*..
gi 1622865026 444 GQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQ 480
Cdd:TIGR04523 609 EKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
640-1177 |
5.36e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.07 E-value: 5.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 640 QAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLE 719
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 720 --EEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLgEAHQAETEALRQElaeaiaaqr 797
Cdd:PRK03918 277 elEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEL-EEKEERLEELKKK--------- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 798 taESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVEL 877
Cdd:PRK03918 347 --LKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKEL 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 878 HANLARALQQVQEKEVRAQKLADDLStlQEKMAATSKEVARLETLVRKAGEQQETASRELVKeparagdREPEWLEEQQG 957
Cdd:PRK03918 425 KKAIEELKKAKGKCPVCGRELTEEHR--KELLEEYTAELKRIEKELKEIEEKERKLRKELRE-------LEKVLKKESEL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 958 RQFCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNA 1037
Cdd:PRK03918 496 IKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAEL 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1038 LNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEaaqiKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEP 1117
Cdd:PRK03918 576 LKELEELGFESVEELEERLKELEPFYNEYLELKDAE----KELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEE 651
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 1118 TGP------------KLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLqgQLEEKARE 1177
Cdd:PRK03918 652 LEKkyseeeyeelreEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL--EKLEKALE 721
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1080-1641 |
5.78e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.05 E-value: 5.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1080 LEELRQTMKQLKEQLAKKEKE--HASGSGAQSEAAgrteptgpkleALRAEVSKLEQQCQQQQEQADSLERSLEAERASR 1157
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdlHERLNGLESELA-----------ELDEEIERYEEQREQARETRDEADEVLEEHEERR 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1158 AErdsaLETLQGQLEEkarelghSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSIL 1237
Cdd:PRK02224 251 EE----LETLEAEIED-------LRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREEL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1238 NRQvlekegeskelkrlvmaESEKSQKLEDRlRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTS 1317
Cdd:PRK02224 320 EDR-----------------DEELRDRLEEC-RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVED 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1318 QAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRA 1397
Cdd:PRK02224 382 RREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPV 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1398 ELLRAQRELGELiplRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVE--LDQAREK 1475
Cdd:PRK02224 462 EGSPHVETIEED---RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRetIEEKRER 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1476 yVQELAAVRADAETRlAEVQREAQSTARElevmTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQ 1555
Cdd:PRK02224 539 -AEELRERAAELEAE-AEEKREAAAEAEE----EAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLR 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1556 QKLKAVQAQGGESQQEAQRLQARLNELQA--------QLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQEL----QEQLQS 1623
Cdd:PRK02224 613 EKREALAELNDERRERLAEKRERKRELEAefdearieEAREDKERAEEYLEQVEEKLDELREERDDLQAEigavENELEE 692
|
570
....*....|....*...
gi 1622865026 1624 LEHLQKENKELRAEAERL 1641
Cdd:PRK02224 693 LEELRERREALENRVEAL 710
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1380-1672 |
6.41e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.96 E-value: 6.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1380 RHREELEQSKQAAGGLRAELLRAQRELGE----LIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLL-------- 1447
Cdd:COG3096 275 RHANERRELSERALELRRELFGARRQLAEeqyrLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQekieryqe 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1448 --------AEENRGLGERANLGRQFLEVELDQAREKyVQELAAVRADAETRLAEVQ------REAQSTARELEVMTAKYE 1513
Cdd:COG3096 355 dleelterLEEQEEVVEEAAEQLAEAEARLEAAEEE-VDSLKSQLADYQQALDVQQtraiqyQQAVQALEKARALCGLPD 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1514 GAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEA--------------QRLQA-R 1578
Cdd:COG3096 434 LTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQawqtarellrryrsQQALAqR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1579 LNELQAQLSQKEQAAEhyklQMEKAKTHYDAKKQQNQELQEQLQSLEHLQkenKELRAEAERLGHELQQAGLKTKEAEQT 1658
Cdd:COG3096 514 LQQLRAQLAELEQRLR----QQQNAERLLEEFCQRIGQQLDAAEELEELL---AELEAQLEELEEQAAEAVEQRSELRQQ 586
|
330
....*....|....
gi 1622865026 1659 CRHLTAQVRSLEAQ 1672
Cdd:COG3096 587 LEQLRARIKELAAR 600
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1219-1596 |
8.96e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 54.36 E-value: 8.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1219 EAERKNSLISSLEEEVSILNRQVLEKeGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLR 1298
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEK-FEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAME 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1299 EEAEKQRVASENLRQELtsQAERAEELGQELKAWQEkffqkeqaLSTLQLEHTSTQALVSELLPAkhlcqqlqaeqaAAE 1378
Cdd:pfam17380 346 RERELERIRQEERKREL--ERIRQEEIAMEISRMRE--------LERLQMERQQKNERVRQELEA------------ARK 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1379 KRHREELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKahgllaeenrglgERA 1458
Cdd:pfam17380 404 VKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQ-------------QEE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1459 NLGRQFLEVELDQAREKYVQELAavRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVE 1538
Cdd:pfam17380 471 ERKRKKLELEKEKRDRKRAEEQR--RKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEM 548
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622865026 1539 ELRKKladsdqaskVQQQKLKAVQAQGGESQQEAQRlqarlnELQAQLSQKEQAAEHY 1596
Cdd:pfam17380 549 EERRR---------IQEQMRKATEERSRLEAMERER------EMMRQIVESEKARAEY 591
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1408-1603 |
1.01e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1408 ELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEvELDQAREKYVQELAAVRADA 1487
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA-ELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1488 ETRLAEVQREAQSTAREL---------EVMTAKYEGAKVKVLEER-QRFQEEKQKLTAQVEELRKKLADSDQASKVQQQK 1557
Cdd:COG4942 107 AELLRALYRLGRQPPLALllspedfldAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1622865026 1558 LKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKA 1603
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
459-706 |
1.09e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 459 EEKQQLSSLIANLQSSISNLSQAKEELEQASQAhgarLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqt 538
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKA----LLKQLAALERRIAALARRIRALEQELAALEAELAE-------- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 539 lqqqeqasqgLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRerdaALQQLEALEKEKAAKLE 618
Cdd:COG4942 88 ----------LEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR----RLQYLKYLAPARREQAE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 619 ILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRArvetacrEQHEAQAQVAELEFQLQSEQQKATEKERVAQEKD 698
Cdd:COG4942 154 ELRADLAELAALRAELEAERAELEALLAELEEERAALEA-------LKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
....*...
gi 1622865026 699 QLQEQLQA 706
Cdd:COG4942 227 ALIARLEA 234
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
596-749 |
1.14e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.85 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 596 LRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVE------TACREQHEA 669
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKkyeeqlGNVRNNKEY 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 670 QAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG1579 92 EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
530-937 |
1.39e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 530 EEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVaeKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEAL 609
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEEL--REELEKLEKLLQLLPLYQELEALEAELAELPERLEEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 610 E------KEKAAKLEILQQQLQVANETRDSAQTSVTQAQREK-AELSQKVEELRARVETACREQHEAQAQVAELEFQLQS 682
Cdd:COG4717 152 EerleelRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 683 EQQKAtekeRVAQEKDQLQEQLQALK-----ESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKEL 757
Cdd:COG4717 232 LENEL----EAAALEERLKEARLLLLiaaalLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEEL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 758 EEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAesecEQLVKEVAAWRERYEESQQEEAQYgAMFQEQLMT 837
Cdd:COG4717 308 QALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL----QELLREAEELEEELQLEELEQEIA-ALLAEAGVE 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 838 LKEECEKARQELQEAKEKVAGIESHSElQISRQQNELVEL--HANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKE 915
Cdd:COG4717 383 DEEELRAALEQAEEYQELKEELEELEE-QLEELLGELEELleALDEEELEEELEELEEELEELEEELEELREELAELEAE 461
|
410 420
....*....|....*....|....
gi 1622865026 916 VARLET--LVRKAGEQQETASREL 937
Cdd:COG4717 462 LEQLEEdgELAELLQELEELKAEL 485
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
217-739 |
1.77e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.10 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 217 RRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLallNEKQAASPLEPRELEELRDKNESLTMRLHETL 296
Cdd:TIGR04523 148 KKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI---KNKLLKLELLLSNLKKKIQKNKSLESQISELK 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 297 KQCQDLKTEKSQMDRKISQLLEEngdlsfklrefashLQQLQDALNELTEEHSRATQEWLEKQAQLEkelstalQDKKCL 376
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKTTE--------------ISNTQTQLNQLKDEQNKIKKQLSEKQKELE-------QNNKKI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 377 EEKNEILQGKLSQLEEhlaLLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEtleteqgQQEAKLLAERDH 456
Cdd:TIGR04523 284 KELEKQLNQLKSEISD---LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLN-------EQISQLKKELTN 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 457 FEEEKQQLSSLIANLQSSISNLSQAKEELEQASQahgarltaqvaSLTSELTTLNATIQQQDQELADLKQQAKeeqaqla 536
Cdd:TIGR04523 354 SESENSEKQRELEEKQNEIEKLKKENQSYKQEIK-----------NLESQINDLESKIQNQEKLNQQKDEQIK------- 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 537 qtlqqqeqasqglrhqVEQLSSSLKQKEQQ-LKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKE--- 612
Cdd:TIGR04523 416 ----------------KLQQEKELLEKEIErLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSink 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 613 KAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATeKER 692
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK-KEN 558
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1622865026 693 VAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISEL 739
Cdd:TIGR04523 559 LEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEI 605
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
644-988 |
1.78e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.42 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 644 EKAELSQKVEELRARVETACREQHEAQAQVAEL--EFQLQSEQQKATEKERVAQEkDQLQEQLQALKESLKVtkGSLEEE 721
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMarELEELSARESDLEQDYQAAS-DHLNLVQTALRQQEKI--ERYQED 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 722 KRRAADALEEQQrcisELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQelaeAIAAQRTAES 801
Cdd:COG3096 356 LEELTERLEEQE----EVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQ----AVQALEKARA 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 802 ECEQLVKEVAAWRERYEESQ-QEEAQYGAMFQ-EQLMTLKEECEKARQELQEAKEKVAG--------------IESHSEL 865
Cdd:COG3096 428 LCGLPDLTPENAEDYLAAFRaKEQQATEEVLElEQKLSVADAARRQFEKAYELVCKIAGeversqawqtarelLRRYRSQ 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 866 Q--------ISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASREL 937
Cdd:COG3096 508 QalaqrlqqLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQL 587
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 938 VKEPARA---GDREPEW---------LEEQQGRQFCSTQAALQAM------EREAEQMGNELERLRAAL 988
Cdd:COG3096 588 EQLRARIkelAARAPAWlaaqdalerLREQSGEALADSQEVTAAMqqllerEREATVERDELAARKQAL 656
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
866-1102 |
2.12e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 866 QISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKeparag 945
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE------ 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 946 drepewLEEQQGRQfcstQAALQAMEREAEQMGneleRLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKA 1025
Cdd:COG4942 95 ------LRAELEAQ----KEELAELLRALYRLG----RQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 1026 AKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHA 1102
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
409-659 |
2.32e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 52.71 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 409 LGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERdhfeeEKQQLSSLIANLQSSISNLSQAKEELEQA 488
Cdd:COG3206 157 LAEAYLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFR-----QKNGLVDLSEEAKLLLQQLSELESQLAEA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 489 sQAHGARLTAQVASLTSELTTLNATIQQ--QDQELADLKQQAKEeqaqlaqtlqqqeqasqgLRHQVEQLSSSLKQKEQQ 566
Cdd:COG3206 232 -RAELAEAEARLAALRAQLGSGPDALPEllQSPVIQQLRAQLAE------------------LEAELAELSARYTPNHPD 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 567 LKEVAEKQEVTRRDHAQQLATAAEEREA---SLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQ--A 641
Cdd:COG3206 293 VIALRAQIAALRAQLQQEAQRILASLEAeleALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESllQ 372
|
250
....*....|....*...
gi 1622865026 642 QREKAELSQKVEELRARV 659
Cdd:COG3206 373 RLEEARLAEALTVGNVRV 390
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
414-931 |
3.53e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.33 E-value: 3.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 414 QLETLKQEAATLAANNTQLQARVETLETEQgqqeakllaerDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHg 493
Cdd:TIGR04523 146 EIKKKEKELEKLNNKYNDLKKQKEELENEL-----------NLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKN- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 494 ARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRH---QVEQLSSSLKQKEQQLKEV 570
Cdd:TIGR04523 214 KSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEkqkELEQNNKKIKELEKQLNQL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 571 AEKQEVTRRDHAQQLATAAEEReasLRERDAALQQLEalekekaAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQ 650
Cdd:TIGR04523 294 KSEISDLNNQKEQDWNKELKSE---LKNQEKKLEEIQ-------NQISQNNKIISQLNEQISQLKKELTNSESENSEKQR 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 651 KVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALE 730
Cdd:TIGR04523 364 ELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIK 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 731 EQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLgeahQAETEALRQELAEAIAAQRTAESECEQLVKEV 810
Cdd:TIGR04523 444 DLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQK----QKELKSKEKELKKLNEEKKELEEKVKDLTKKI 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 811 AAWRERYEESQQEEAQygamFQEQLMTLKEECEKARQELQeakekvagiESHSELQISRQQNELVELHANLARALQQVQE 890
Cdd:TIGR04523 520 SSLKEKIEKLESEKKE----KESKISDLEDELNKDDFELK---------KENLEKEIDEKNKEIEELKQTQKSLKKKQEE 586
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1622865026 891 KEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQE 931
Cdd:TIGR04523 587 KQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENE 627
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
215-572 |
3.75e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 3.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKD-----AQIAMMQQRIDRLAL----LNEKQAASPLEPRELEELRDKN 285
Cdd:PRK03918 373 ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEiskitARIGELKKEIKELKKaieeLKKAKGKCPVCGRELTEEHRKE 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 286 --ESLTMRLHETLKQCQDLKTEKSQMD---RKISQLLEENGDLSfKLREFASHLQQLQDALNELT-EEHSRATQEW---L 356
Cdd:PRK03918 453 llEEYTAELKRIEKELKEIEEKERKLRkelRELEKVLKKESELI-KLKELAEQLKELEEKLKKYNlEELEKKAEEYeklK 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 357 EKQAQLEKELSTALQD---KKCLEEKNEILQGKLSQLEEHLA----LLRENPPQEKGEVLGDVLQLETLKQEAATLAANN 429
Cdd:PRK03918 532 EKLIKLKGEIKSLKKElekLEELKKKLAELEKKLDELEEELAellkELEELGFESVEELEERLKELEPFYNEYLELKDAE 611
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 430 TQLQA---RVETLETEQGQQEAKLLAERDHFEEEKQQLSSLianlqssisNLSQAKEELEQASQAHgARLTAQVASLTSE 506
Cdd:PRK03918 612 KELEReekELKKLEEELDKAFEELAETEKRLEELRKELEEL---------EKKYSEEEYEELREEY-LELSRELAGLRAE 681
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622865026 507 LTTLNATIQQQDQELADLKQQAKE--EQAQLAQTLQQQEQASQGLRHQVEQLSSSLkqKEQQLKEVAE 572
Cdd:PRK03918 682 LEELEKRREEIKKTLEKLKEELEEreKAKKELEKLEKALERVEELREKVKKYKALL--KERALSKVGE 747
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
497-745 |
4.68e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 497 TAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqtlqqQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEV 576
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKA-----------LLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 577 TRRDhAQQLATAAEEREASLRERDAALQQLEALEKEKAakleILQQQLQVANETRDSAQTSVTQAQREKAElsqkveELR 656
Cdd:COG4942 88 LEKE-IAELRAELEAQKEELAELLRALYRLGRQPPLAL----LLSPEDFLDAVRRLQYLKYLAPARREQAE------ELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 657 ARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCI 736
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*....
gi 1622865026 737 SELKAETRS 745
Cdd:COG4942 237 AAAAERTPA 245
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
263-881 |
4.89e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.97 E-value: 4.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 263 LLNEKQAASPLEPRELEELRDKNESLTMRLHetlKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREfashLQQLQDALN 342
Cdd:TIGR00606 413 LCADLQSKERLKQEQADEIRDEKKGLGRTIE---LKKEILEKKQEELKFVIKELQQLEGSSDRILEL----DQELRKAER 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 343 ELTEEHSRATQEWLEKQAQLEKELSTALQDKKC-LEEKNEILQGKLSQLEEHLAL----------LRENPPQEKGEV--- 408
Cdd:TIGR00606 486 ELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRkLDQEMEQLNHHTTTRTQMEMLtkdkmdkdeqIRKIKSRHSDELtsl 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 409 LGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANL------QSSISNLSQAK 482
Cdd:TIGR00606 566 LGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdvcgsQDEESDLERLK 645
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 483 EELEQASQ--AHGARLTAQVASLTSELTTLN--------------ATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQAS 546
Cdd:TIGR00606 646 EEIEKSSKqrAMLAGATAVYSQFITQLTDENqsccpvcqrvfqteAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRR 725
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 547 QGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDhAQQLATAAEEREASLRERDAALQQLEALEKEkAAKLEILQQQL-- 624
Cdd:TIGR00606 726 DEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRD-IQRLKNDIEEQETLLGTIMPEEESAKVCLTD-VTIMERFQMELkd 803
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 625 -------QVANETRDSAQTSVTQAQREKAE-------LSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEK 690
Cdd:TIGR00606 804 verkiaqQAAKLQGSDLDRTVQQVNQEKQEkqheldtVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRR 883
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 691 ERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEAR 770
Cdd:TIGR00606 884 QQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENK 963
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 771 LQQLGEAHQAETEalrQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEaqygAMFQEQLMTLKEEcekarQELQ 850
Cdd:TIGR00606 964 IQDGKDDYLKQKE---TELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQE----RWLQDNLTLRKRE-----NELK 1031
|
650 660 670
....*....|....*....|....*....|..
gi 1622865026 851 EAKEKVAGIESH-SELQISRQQNELVELHANL 881
Cdd:TIGR00606 1032 EVEEELKQHLKEmGQMQVLQMKQEHQKLEENI 1063
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
645-1603 |
4.94e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 4.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 645 KAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQE-KDQLQEQLQALKESLKVTKGSLEEEKR 723
Cdd:pfam01576 10 KEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEmRARLAARKQELEEILHELESRLEEEEE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 724 RAADALEEQQRCISELKAETRSLVEQHKQEQK---ELEEEKAGRKGLEARLQQLgEAHQAETEALRQELAEAIAAQRTAE 800
Cdd:pfam01576 90 RSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKlqlEKVTTEAKIKKLEEDILLL-EDQNSKLSKERKLLEERISEFTSNL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 801 SECEQLVKEVAAWRERYEesqqeeaqygAMFQEQLMTLKEEcEKARQELQEAKEKVAGIESHSELQISRQQNELVELHAN 880
Cdd:pfam01576 169 AEEEEKAKSLSKLKNKHE----------AMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 881 LARALQQVQEKEVRAQK--------------LADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASREL--------- 937
Cdd:pfam01576 238 LAKKEEELQAALARLEEetaqknnalkkireLEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELedtldttaa 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 938 -----------VKEPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQmgneLERLRAALMESQGQQQEERGQQEREV 1006
Cdd:pfam01576 318 qqelrskreqeVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQ----AKRNKANLEKAKQALESENAELQAEL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1007 ARLTQ-----ERGRAQADLAL-EKAAKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKEL 1080
Cdd:pfam01576 394 RTLQQakqdsEHKRKKLEGQLqELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDT 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1081 EELRQTMKQLKEQLAKK----EKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLErsleaERAS 1156
Cdd:pfam01576 474 QELLQEETRQKLNLSTRlrqlEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALE-----EGKK 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1157 RAERDsaLETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSI 1236
Cdd:pfam01576 549 RLQRE--LEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDR 626
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1237 LNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAET---------ASNSARAAERSS-ALREEVQSLR---EEAEK 1303
Cdd:pfam01576 627 AEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEMedlvsskddVGKNVHELERSKrALEQQVEEMKtqlEELED 706
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1304 QRVASEN--LRQELTSQAERAE---ELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAE 1378
Cdd:pfam01576 707 ELQATEDakLRLEVNMQALKAQferDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQI 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1379 KRHREELEQSKQAAGGLRAELLRAQRELGELIPLRQKV----AEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGL 1454
Cdd:pfam01576 787 DAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEIlaqsKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDEL 866
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1455 GERANLGRQFLEVELDQAREkyvqeLAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEER---QRFQEEKQ 1531
Cdd:pfam01576 867 ADEIASGASGKSALQDEKRR-----LEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERstsQKSESARQ 941
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1532 KLTAQVEELRKKLADSDQASKVQQQ--------KLKAVQAQGGESQQEAQ-------RLQARLNELQAQLSQKEQAAEHY 1596
Cdd:pfam01576 942 QLERQNKELKAKLQEMEGTVKSKFKssiaaleaKIAQLEEQLEQESRERQaanklvrRTEKKLKEVLLQVEDERRHADQY 1021
|
....*..
gi 1622865026 1597 KLQMEKA 1603
Cdd:pfam01576 1022 KDQAEKG 1028
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
687-936 |
5.62e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 5.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 687 ATEKERVAQEKDQLQEQLQALKESLKvtkgSLEEEKRRAADALEEQQRCISELKAETRSLVEQhkqeqkeLEEEKAGRKG 766
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELA----ALKKEEKALLKQLAALERRIAALARRIRALEQE-------LAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 767 LEARLQQLgeahQAETEALRQELAEAI-AAQRTAESECEQLVkevaawreryeeSQQEEAQYGAMFQEQLMTLKEECEKA 845
Cdd:COG4942 88 LEKEIAEL----RAELEAQKEELAELLrALYRLGRQPPLALL------------LSPEDFLDAVRRLQYLKYLAPARREQ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 846 RQELQEAKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRK 925
Cdd:COG4942 152 AEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
250
....*....|.
gi 1622865026 926 AGEQQETASRE 936
Cdd:COG4942 232 LEAEAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
633-860 |
6.40e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 6.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 633 SAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKErvaQEKDQLQEQLQALKESLK 712
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALE---QELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 713 VTKGSLEEEKRRAADALEEQQRciSELKAETRSLVEQHKQEQKELEEekagrkgleARLQQLGEAHQAETEALR---QEL 789
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYR--LGRQPPLALLLSPEDFLDAVRRL---------QYLKYLAPARREQAEELRadlAEL 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 790 AEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIE 860
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
213-520 |
6.59e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 6.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 213 QFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnekqaasplepRELEELRDKNESLTMRL 292
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR-------------EALDELRAELTLLNEEA 819
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 293 HETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHsratQEWLEKQAQLEKELSTALQD 372
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL----EALLNERASLEEALALLRSE 895
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 373 KKCLEEKNEILQGKLSQLEEHLALLREnppqEKGEVlgdVLQLETLKQEAATLAAnntQLQARVETLETEQGQQEAKLLA 452
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELRE----KLAQL---ELRLEGLEVRIDNLQE---RLSEEYSLTLEEAEALENKIED 965
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622865026 453 ERDHFEEEKQQLSSLIANLQSsiSNLSqAKEELEQASQAHGaRLTAQVASLTSELTTLNATIQQQDQE 520
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKELGP--VNLA-AIEEYEELKERYD-FLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1078-1308 |
6.86e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 6.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1078 KELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASR 1157
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1158 AERDSALETLQGQleEKARELGHSQSALASVqRELAALRTKVQDHskaedewKAQVARGRQEAERKNSLISSLEEEVSIL 1237
Cdd:COG4942 107 AELLRALYRLGRQ--PPLALLLSPEDFLDAV-RRLQYLKYLAPAR-------REQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1238 NRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAErssaLREEVQSLREEAEKQRVAS 1308
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE----LEALIARLEAEAAAAAERT 243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
832-1042 |
7.82e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 7.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 832 QEQLMTLKEECEKARQELQEAKEKVAGIEShselQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAA 911
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLK----QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 912 TSKEVARLETLVRKAGEQQETASRELVKEPARAgDREPEWLE------EQQGRQFCSTQAALQAMEREAEQMGNELERLR 985
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLALLLSPEDFLDA-VRRLQYLKylaparREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 986 AALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNALNEQR 1042
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1236-1674 |
8.02e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 8.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1236 ILNRQVLEKEGESKELKrlvmAESEKSQKLEDRLRLLQAETAsnsaRAAERSSALREEVQSLREEAEKQRVASE--NLRQ 1313
Cdd:COG4717 68 LNLKELKELEEELKEAE----EKEEEYAELQEELEELEEELE----ELEAELEELREELEKLEKLLQLLPLYQEleALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1314 ELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHlcqQLQAEQAAAEKRHREELEQSKQAAG 1393
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE---EELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1394 GLRAELLRAQRELGELIPLRQKVAEQERTaQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAR 1473
Cdd:COG4717 217 EAQEELEELEEELEQLENELEAAALEERL-KEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAR 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1474 EKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQrfqEEKQKLTAQVEELRKKLaDSDQASKV 1553
Cdd:COG4717 296 EKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRI---EELQELLREAEELEEEL-QLEELEQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1554 QQQKLKAVQA-------QGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAkthydakkQQNQELQEQLQSLEH 1626
Cdd:COG4717 372 IAALLAEAGVedeeelrAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--------ELEEELEELEEELEE 443
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1627 LQKENKELRAEAERLGHELQQAGLKTK--EAEQTCRHLTAQVRSLEAQVA 1674
Cdd:COG4717 444 LEEELEELREELAELEAELEQLEEDGElaELLQELEELKAELRELAEEWA 493
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
464-734 |
9.12e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 51.21 E-value: 9.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 464 LSSLIAN--LQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATiqQQDQELADLKQQAKEEqaqlaqtlqq 541
Cdd:PRK10929 9 MAWLLSWgaYAATAPDEKQITQELEQAKAAKTPAQAEIVEALQSALNWLEER--KGSLERAKQYQQVIDN---------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 542 QEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTR-RDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEIL 620
Cdd:PRK10929 77 FPKLSAELRQQLNNERDEPRSVPPNMSTDALEQEILQvSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 621 QQQLQVA-NETRDSAQTSVTQAQREKAELSQKVEEL--------------RARVETACREQHEAQAQVAELEFQLQSEQQ 685
Cdd:PRK10929 157 ERRLQTLgTPNTPLAQAQLTALQAESAALKALVDELelaqlsannrqelaRLRSELAKKRSQQLDAYLQALRNQLNSQRQ 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1622865026 686 KATEK--ERVAQEKDQLQEQLQALKESLKVTK---GSLEEEKRRaADALEEQQR 734
Cdd:PRK10929 237 REAERalESTELLAEQSGDLPKSIVAQFKINRelsQALNQQAQR-MDLIASQQR 289
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
777-1132 |
1.08e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 50.82 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 777 AHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYgamfQEQLMTLKEECEKARQELQEAKEKV 856
Cdd:PRK10929 20 ATAPDEKQITQELEQAKAAKTPAQAEIVEALQSALNWLEERKGSLERAKQY----QQVIDNFPKLSAELRQQLNNERDEP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 857 AGIESHS-----ELQISRQQNELVElhanLARALQQVQEkevRAQKLADDLSTLQekmaatskevarletlvrkagEQQE 931
Cdd:PRK10929 96 RSVPPNMstdalEQEILQVSSQLLE----KSRQAQQEQD---RAREISDSLSQLP---------------------QQQT 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 932 TASRELVKEPARAGDR-EPEWLEEQQgrQFCSTQA---ALQAM--EREAEQMG----NELERLRAALMESQGQQQEERGQ 1001
Cdd:PRK10929 148 EARRQLNEIERRLQTLgTPNTPLAQA--QLTALQAesaALKALvdELELAQLSannrQELARLRSELAKKRSQQLDAYLQ 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1002 QEREvaRLTQERGRaQADLALEKAAK-AELEMRLQNALNEQrveFATLQEaLAHALTEkEGKDQELVKLRGLEAAqiKEL 1080
Cdd:PRK10929 226 ALRN--QLNSQRQR-EAERALESTELlAEQSGDLPKSIVAQ---FKINRE-LSQALNQ-QAQRMDLIASQQRQAA--SQT 295
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 1081 EELRQTMKQLKEQlakkekehasgsgAQ----SEAAGrteptgpklEALRAEVSKL 1132
Cdd:PRK10929 296 LQVRQALNTLREQ-------------SQwlgvSNALG---------EALRAQVARL 329
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1074-1670 |
1.11e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.74 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1074 AAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQS--EAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSlE 1151
Cdd:TIGR00618 222 QVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKkqQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHI-K 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1152 AERASRAERDSALETLQGQLEEKARELGHSQSALASvqrelaalRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLE 1231
Cdd:TIGR00618 301 AVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQ--------QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISC 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1232 EEVSILNRqvlekegeSKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERS------SALREEVQSLREEAEKQR 1305
Cdd:TIGR00618 373 QQHTLTQH--------IHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRdlqgqlAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1306 VASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALV------------SELLPAKHLCQQLQ-- 1371
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLlelqeepcplcgSCIHPNPARQDIDNpg 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1372 ------AEQAAAEKRHREELEQSKQAAGGLRAELLR----AQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLK 1441
Cdd:TIGR00618 525 pltrrmQRGEQTYAQLETSEEDVYHQLTSERKQRASlkeqMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLS 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1442 KAHGLLAEENRGLGERAN--LGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKV 1519
Cdd:TIGR00618 605 EAEDMLACEQHALLRKLQpeQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQK 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1520 LEERQRF-----------QEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQ----ARLNELQA 1584
Cdd:TIGR00618 685 MQSEKEQltywkemlaqcQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQArtvlKARTEAHF 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1585 QLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLE-----HLQKENKELRAEAERLGHELQQAGLKTKEAEQTC 1659
Cdd:TIGR00618 765 NNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEaeigqEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATL 844
|
650
....*....|.
gi 1622865026 1660 RHLTAQVRSLE 1670
Cdd:TIGR00618 845 GEITHQLLKYE 855
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
592-1030 |
1.18e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 592 REASLRERDAALQQLEALEkEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVE--ELRARVETACREQHEA 669
Cdd:COG4717 66 PELNLKELKELEEELKEAE-EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAEL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 670 QAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTK----GSLEEEKRRAADALEEQQRCISELKAETRS 745
Cdd:COG4717 145 PERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATeeelQDLAEELEELQQRLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 746 LVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEA 825
Cdd:COG4717 225 LEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 826 qygamfqEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVELHANLARALQqvQEKEVRAQKLADDLSTL 905
Cdd:COG4717 305 -------EELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQEIAAL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 906 QEKMAATSKEvaRLETLVRKAGEQQETASRELVKEpARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLR 985
Cdd:COG4717 376 LAEAGVEDEE--ELRAALEQAEEYQELKEELEELE-EQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELR 452
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1622865026 986 AALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAEL 1030
Cdd:COG4717 453 EELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
326-707 |
1.22e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 50.72 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 326 KLREFASHLQQLQDALNELTEEHSR--ATQEWLEKQAQLEKELSTALQDKkcleekneilqgklsqlEEHLALLRENPPQ 403
Cdd:COG3096 283 LSERALELRRELFGARRQLAEEQYRlvEMARELEELSARESDLEQDYQAA-----------------SDHLNLVQTALRQ 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 404 EKgevlgdvlQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANL----------QS 473
Cdd:COG3096 346 QE--------KIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALdvqqtraiqyQQ 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 474 SISNLSQAK-------------EELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKE-EQAQLAQTL 539
Cdd:COG3096 418 AVQALEKARalcglpdltpenaEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEvERSQAWQTA 497
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 540 QQQEQASQGLRHQVEQLSsslkQKEQQLKEVaeKQEVTRRDHAQQLATAAEEREAslRERDAAlQQLEALEKEKAAKLEI 619
Cdd:COG3096 498 RELLRRYRSQQALAQRLQ----QLRAQLAEL--EQRLRQQQNAERLLEEFCQRIG--QQLDAA-EELEELLAELEAQLEE 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 620 LQQQLQVANETRdsaqtsvTQAQREKAELSQKVEELRARvETACREQHEAQAQVAEL---EF----QLQSEQQKATEKER 692
Cdd:COG3096 569 LEEQAAEAVEQR-------SELRQQLEQLRARIKELAAR-APAWLAAQDALERLREQsgeALadsqEVTAAMQQLLERER 640
|
410
....*....|....*.
gi 1622865026 693 VA-QEKDQLQEQLQAL 707
Cdd:COG3096 641 EAtVERDELAARKQAL 656
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
653-1198 |
1.92e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 653 EELRARVETAcREQHEAQAQVAELEFQLQSEQQKATEKERV-----AQEKDQLQEQLQALKESLKVTKGSLEEEKRRAAD 727
Cdd:COG4913 238 ERAHEALEDA-REQIELLEPIRELAERYAAARERLAELEYLraalrLWFAQRRLELLEAELEELRAELARLEAELERLEA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 728 ALEEQQRCISELKAETRSL----VEQHKQEQKELEEEKAGRKG----LEARLQQLGEAHQAETEALRQELAEAIAAQRTA 799
Cdd:COG4913 317 RLDALREELDELEAQIRGNggdrLEQLEREIERLERELEERERrrarLEALLAALGLPLPASAEEFAALRAEAAALLEAL 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 800 ESECEQLVKEVAAWRERYEESQQEEAQygamfqeqlmtLKEECE--KARQ-----ELQEAKEKVAgieshSELQISRQQ- 871
Cdd:COG4913 397 EEELEALEEALAEAEAALRDLRRELRE-----------LEAEIAslERRKsnipaRLLALRDALA-----EALGLDEAEl 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 872 ---NELVELHA--------------NLARAL-------QQVQEKeVRAQKLADDLSTLQEKMAATSKEVARLE--TLVRK 925
Cdd:COG4913 461 pfvGELIEVRPeeerwrgaiervlgGFALTLlvppehyAAALRW-VNRLHLRGRLVYERVRTGLPDPERPRLDpdSLAGK 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 926 ageqqetasreLVKEPARAGDrepeWLEEQQGRQF----CSTQAALQAMER---EAEQMGNELERLRAALMESQGQQQEE 998
Cdd:COG4913 540 -----------LDFKPHPFRA----WLEAELGRRFdyvcVDSPEELRRHPRaitRAGQVKGNGTRHEKDDRRRIRSRYVL 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 999 RGQQEREVARLTQERGRAQADLALEKAAKAELEmRLQNALNEQRVEFATLQEaLAHALTEKEGKDQELVKLRgleaAQIK 1078
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALE-AELDALQERREALQRLAE-YSWDEIDVASAEREIAELE----AELE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1079 ELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRA 1158
Cdd:COG4913 679 RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAA 758
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1622865026 1159 ERDSALETLQGQLEEKARELghsQSALASVQRELAALRTK 1198
Cdd:COG4913 759 LGDAVERELRENLEERIDAL---RARLNRAEEELERAMRA 795
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
422-718 |
2.17e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 49.91 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 422 AATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQaHGARLTAQVA 501
Cdd:PRK11281 19 LLCLSSAFARAASNGDLPTEADVQAQLDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQ-QLAQAPAKLR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 502 SLTSELTTLNATIQQQDQE------LADLKQQ-AKEEQAQLAQTLQQQEQASQ--GLRHQVE----QLSSSLKQKEQ--- 565
Cdd:PRK11281 98 QAQAELEALKDDNDEETREtlstlsLRQLESRlAQTLDQLQNAQNDLAEYNSQlvSLQTQPEraqaALYANSQRLQQirn 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 566 QLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQ---QLEALEK----EKAAKLEILQQQLQVanetrdsAQTSV 638
Cdd:PRK11281 178 LLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSLEgntQLQDLLQkqrdYLTARIQRLEHQLQL-------LQEAI 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 639 TQAQREKAElsQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKE--------RVAQEKDQLQEQLQALKES 710
Cdd:PRK11281 251 NSKRLTLSE--KTVQEAQSQDEAARIQANPLVAQELEINLQLSQRLLKATEKLntltqqnlRVKNWLDRLTQSERNIKEQ 328
|
....*...
gi 1622865026 711 LKVTKGSL 718
Cdd:PRK11281 329 ISVLKGSL 336
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1157-1673 |
2.37e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.65 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1157 RAERDSALETLQGQLEEKARELGHSQsaLASVQRELAALRTKVQDHskaeDEWKAQVARGRQEA-------ERKNSLISS 1229
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKDLHER--LNGLESELAELDEEIERY----EEQREQARETRDEAdevleehEERREELET 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1230 LEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSA---RAAERSSALREEVQSLREEAEKQRV 1306
Cdd:PRK02224 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDAdaeAVEARREELEDRDEELRDRLEECRV 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1307 ASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELlpakhlcqqlqaeqaaaekrhREELE 1386
Cdd:PRK02224 336 AAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEEL---------------------EEEIE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1387 QSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTaqqLRAEKASYAEQLsmlkkahgllaEENRGLGERANLGRQFLE 1466
Cdd:PRK02224 395 ELRERFGDAPVDLGNAEDFLEELREERDELREREAE---LEATLRTARERV-----------EEAEALLEAGKCPECGQP 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1467 VE-------LDQAREKyVQELAAVRADAETRLAEVqreaqstarelevmtakyegakvkvlEERQRFQEEKQKLTAQVEE 1539
Cdd:PRK02224 461 VEgsphvetIEEDRER-VEELEAELEDLEEEVEEV--------------------------EERLERAEDLVEAEDRIER 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1540 LRKKLADSDQaskvqqqkLKAVQAQGGESQQE-AQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQ 1618
Cdd:PRK02224 514 LEERREDLEE--------LIAERRETIEEKRErAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELK 585
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622865026 1619 EQLQSLEHL---QKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQV 1673
Cdd:PRK02224 586 ERIESLERIrtlLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEF 643
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
315-983 |
2.81e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.57 E-value: 2.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 315 QLLEENgdlsFKLREFASHLQQLQDALNELTEEHSRATqEWLEK---QAQLEKELSTALQDKKCLEEKNEILQGKLSQLE 391
Cdd:COG3096 300 QLAEEQ----YRLVEMARELEELSARESDLEQDYQAAS-DHLNLvqtALRQQEKIERYQEDLEELTERLEEQEEVVEEAA 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 392 EHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQ-QEAKLLAE--RDH---FEEEKQQLS 465
Cdd:COG3096 375 EQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARALcGLPDLTPEnaEDYlaaFRAKEQQAT 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 466 SLIANLQSSISNLSQAKEELEQASQAhgarltaqVASLTSELTTLNA--TIQQQDQELADLKQQAKEEQAQLAQTLQQQE 543
Cdd:COG3096 455 EEVLELEQKLSVADAARRQFEKAYEL--------VCKIAGEVERSQAwqTARELLRRYRSQQALAQRLQQLRAQLAELEQ 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 544 QAS--QGLRHQVEQLSSSLKQK---EQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEK------E 612
Cdd:COG3096 527 RLRqqQNAERLLEEFCQRIGQQldaAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAArapawlA 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 613 KAAKLEILQQQLqvaNETRDSAQtSVTQAqrekaeLSQKVEELRArvetACREQHEAQAQVAELEFQLQSEQQKA-TEKE 691
Cdd:COG3096 607 AQDALERLREQS---GEALADSQ-EVTAA------MQQLLERERE----ATVERDELAARKQALESQIERLSQPGgAEDP 672
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 692 RVAQEKDQL---------------------------------------QEQLQALK---ESLKVTKG----------SLE 719
Cdd:COG3096 673 RLLALAERLggvllseiyddvtledapyfsalygparhaivvpdlsavKEQLAGLEdcpEDLYLIEGdpdsfddsvfDAE 752
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 720 EEKRRAADALEEQQ------------------RCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARL-QQLGEAHQA 780
Cdd:COG3096 753 ELEDAVVVKLSDRQwrysrfpevplfgraareKRLEELRAERDELAEQYAKASFDVQKLQRLHQAFSQFVgGHLAVAFAP 832
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 781 ETEAlrqELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMfQEQLMTLKEE-----CEKARQELQEAKEK 855
Cdd:COG3096 833 DPEA---ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKL-LPQANLLADEtladrLEELREELDAAQEA 908
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 856 VAGIESHselqiSRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASR 935
Cdd:COG3096 909 QAFIQQH-----GKALAQLEPLVAVLQSDPEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRPHFSYEDAVGLLGENS 983
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 936 ELVK---------EPARAGDREPewLEEQQGR--QFCSTQAALQAMEREAEQMGNELER 983
Cdd:COG3096 984 DLNEklrarleqaEEARREAREQ--LRQAQAQysQYNQVLASLKSSRDAKQQTLQELEQ 1040
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
211-670 |
2.89e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 2.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 211 TPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQI-AMMQQRIDRLALLNEKQAASPLEPRELEELRDKNESLT 289
Cdd:TIGR00618 448 TCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKkAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLT 527
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 290 MRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLEKELSTA 369
Cdd:TIGR00618 528 RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAE 607
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 370 LQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAK 449
Cdd:TIGR00618 608 DMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQS 687
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 450 LLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAK 529
Cdd:TIGR00618 688 EKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNN 767
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 530 EEQAQLAQTLQQQEQASQGLRHQVEQLSS---SLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAAL--- 603
Cdd:TIGR00618 768 EEVTAALQTGAELSHLAAEIQFFNRLREEdthLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLgei 847
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622865026 604 -QQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQ 670
Cdd:TIGR00618 848 tHQLLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALIKFLHEITLYANVRLANQSEGR 915
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1193-1325 |
2.95e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.09 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1193 AALRTKVQDHSKAEDEwKAQVARGRQEAERknsliSSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLL 1272
Cdd:COG2433 380 EALEELIEKELPEEEP-EAEREKEHEEREL-----TEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEA 453
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 1273 QAEtASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELtsqaERAEEL 1325
Cdd:COG2433 454 RSE-ERREIRKDREISRLDREIERLERELEEERERIEELKRKL----ERLKEL 501
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1044-1657 |
3.13e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.20 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1044 EFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPT-GPKL 1122
Cdd:pfam02463 167 LKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLlQELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1123 EALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDH 1202
Cdd:pfam02463 247 RDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1203 SKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSAR 1282
Cdd:pfam02463 327 EKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1283 AAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLP 1362
Cdd:pfam02463 407 AQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1363 AKHLCQQLQAEQAAAEKRHREELE----QSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLS 1438
Cdd:pfam02463 487 ELLLSRQKLEERSQKESKARSGLKvllaLIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1439 MLKKAHGLLAEENRG--LGERANLGRQFLEVELDQAREKYVQELAAVRAD-AETRLAEVQREAQSTARELEVMTAKYEGA 1515
Cdd:pfam02463 567 VRALTELPLGARKLRllIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADeDDKRAKVVEGILKDTELTKLKESAKAKES 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1516 KVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQ-----------ASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQA 1584
Cdd:pfam02463 647 GLRKGVSLEEGLAEKSEVKASLSELTKELLEIQElqekaeselakEEILRRQLEIKKKEQREKEELKKLKLEAEELLADR 726
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 1585 QLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQ 1657
Cdd:pfam02463 727 VQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQ 799
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
522-749 |
4.41e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 522 ADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRrdhaQQLATAAEEREASLRERDA 601
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALE----QELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 602 ALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEfqlq 681
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE---- 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 682 seqqkaTEKERVAQEKDQLQEQ---LQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG4942 171 ------AERAELEALLAELEEEraaLEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
210-795 |
4.55e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 48.63 E-value: 4.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 210 QTPQFQMRRLKKQLADERSNRDELELELAENR--KLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPRELEELRDKNES 287
Cdd:pfam01576 3 QEEEMQAKEEELQKVKERQQKAESELKELEKKhqQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 288 ltmRLHETLKQCQDLKTEKSQMDRKISQL---LEENGDLSFKLR----EFASHLQQLQDALNELTEEHSRATQEwlekQA 360
Cdd:pfam01576 83 ---RLEEEEERSQQLQNEKKKMQQHIQDLeeqLDEEEAARQKLQlekvTTEAKIKKLEEDILLLEDQNSKLSKE----RK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 361 QLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLE 440
Cdd:pfam01576 156 LLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 441 TEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQA------HGARLTAQVASLTSELT-TLNAT 513
Cdd:pfam01576 236 AQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAArnkaekQRRDLGEELEALKTELEdTLDTT 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 514 IQQQ------DQELADLKQQAKEEQaqlaqtlqqqeqasqglRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAqQLAT 587
Cdd:pfam01576 316 AAQQelrskrEQEVTELKKALEEET-----------------RSHEAQLQEMRQKHTQALEELTEQLEQAKRNKA-NLEK 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 588 AAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQvanetrdSAQTSVTQAQREKAELSQKVEELRARVETACREQH 667
Cdd:pfam01576 378 AKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQ-------ELQARLSESERQRAELAEKLSKLQSELESVSSLLN 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 668 EAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLV 747
Cdd:pfam01576 451 EAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMK 530
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1622865026 748 EQHKQEQKELEEEKAGRKGLearlqqlgeahQAETEALRQELAEAIAA 795
Cdd:pfam01576 531 KKLEEDAGTLEALEEGKKRL-----------QRELEALTQQLEEKAAA 567
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
590-715 |
5.12e-05 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 47.74 E-value: 5.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 590 EEREASLRERDAALQQLEAlEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELS----------QKVEELRARV 659
Cdd:COG1566 79 TDLQAALAQAEAQLAAAEA-QLARLEAELGAEAEIAAAEAQLAAAQAQLDLAQRELERYQalykkgavsqQELDEARAAL 157
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 660 ETACREQHEAQAQVAELEFQLQSEQQKATEKERVAqekdQLQEQLQALKESLKVTK 715
Cdd:COG1566 158 DAAQAQLEAAQAQLAQAQAGLREEEELAAAQAQVA----QAEAALAQAELNLARTT 209
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
550-856 |
5.27e-05 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 48.33 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 550 RHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASL-----RERDAALQQLEALEKEKAAKLEILQQQL 624
Cdd:pfam02029 19 RRRQKEEEEPSGQVTESVEPNEHNSYEEDSELKPSGQGGLDEEEAFLdrtakREERRQKRLQEALERQKEFDPTIADEKE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 625 QVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAElefqlqSEQQKATEKERVAQEKDQLQEQL 704
Cdd:pfam02029 99 SVAERKENNEEEENSSWEKEEKRDSRLGRYKEEETEIREKEYQENKWSTEV------RQAEEEGEEEEDKSEEAEEVPTE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 705 QALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETR-----SLVEQHKQEQKELEEEKAGRKGLEARL---QQLGE 776
Cdd:pfam02029 173 NFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGeeevtKLKVTTKRRQGGLSQSQEREEEAEVFLeaeQKLEE 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 777 AHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQ----QEEAQYGAMFQEQLMTLKEECEKARQELQEA 852
Cdd:pfam02029 253 LRRRRQEKESEEFEKLRQKQQEAELELEELKKKREERRKLLEEEEqrrkQEEAERKLREEEEKRRMKEEIERRRAEAAEK 332
|
....
gi 1622865026 853 KEKV 856
Cdd:pfam02029 333 RQKL 336
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
378-604 |
5.88e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 378 EKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHF 457
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 458 EEEKQQLSSLIANLQ--------------SSISNLSQAKEELEQASQAHGARLTAQVASLTsELTTLNATIQQQDQELAD 523
Cdd:COG4942 100 EAQKEELAELLRALYrlgrqpplalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLA-ELAALRAELEAERAELEA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 524 LKQQAKEEQAQLAQTLQQQEQasqglrhQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAAL 603
Cdd:COG4942 179 LLAELEEERAALEALKAERQK-------LLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAAL 251
|
.
gi 1622865026 604 Q 604
Cdd:COG4942 252 K 252
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
276-507 |
5.93e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 5.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 276 RELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSratqew 355
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE------ 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 356 lEKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQekgevlgDVLQLETLKQEAATLAANNTQLQAR 435
Cdd:COG4942 101 -AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPA-------RREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 436 VETLETEQGQQEakllAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQahgaRLTAQVASLTSEL 507
Cdd:COG4942 173 RAELEALLAELE----EERAALEALKAERQKLLARLEKELAELAAELAELQQEAE----ELEALIARLEAEA 236
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1248-1673 |
6.16e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.41 E-value: 6.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1248 SKELKRLVMAESEKSQKLE---DRLRLLQaetasNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEE 1324
Cdd:COG3096 312 ARELEELSARESDLEQDYQaasDHLNLVQ-----TALRQQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEA 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1325 LGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCqqlqaeqaaaekrhreELEQSKQAAGGLRAELLRAQr 1404
Cdd:COG3096 387 AEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARALC----------------GLPDLTPENAEDYLAAFRAK- 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1405 elgeliplrqkvaEQERTAQQLRAEkasyaEQLSMLKKAHgllaeenrglgeranlgRQFlevelDQAREKYVQELAAV- 1483
Cdd:COG3096 450 -------------EQQATEEVLELE-----QKLSVADAAR-----------------RQF-----EKAYELVCKIAGEVe 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1484 RADAetrlAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQkltaqVEELRKKLAdsdQASKVQQQKLKAVQA 1563
Cdd:COG3096 490 RSQA----WQTARELLRRYRSQQALAQRLQQLRAQLAELEQRLRQQQN-----AERLLEEFC---QRIGQQLDAAEELEE 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1564 QGGESQQEAQRLQARLNELQAQLSQKEQaaehyklQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGH 1643
Cdd:COG3096 558 LLAELEAQLEELEEQAAEAVEQRSELRQ-------QLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTA 630
|
410 420 430
....*....|....*....|....*....|
gi 1622865026 1644 ELQQAGLKTKEAEQTCRHLTAQVRSLEAQV 1673
Cdd:COG3096 631 AMQQLLEREREATVERDELAARKQALESQI 660
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
947-1596 |
7.64e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.04 E-value: 7.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 947 REPEWLEEQQGRQFCSTQAalQAMEREAEQMGNELERLRAALmeSQGQQQEERGQQEREVARLTQERGRAQADLALEKAA 1026
Cdd:TIGR00618 247 QKREAQEEQLKKQQLLKQL--RARIEELRAQEAVLEETQERI--NRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1027 KAELEMRLQNAL-NEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGS 1105
Cdd:TIGR00618 323 RAKLLMKRAAHVkQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKEL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1106 GAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSAL 1185
Cdd:TIGR00618 403 DILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIH 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1186 ASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEA------ERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAES 1259
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARqdidnpGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLK 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1260 EKSQKLEDRLRLLqaetASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAE-ELGQELKAWQEKFFQ 1338
Cdd:TIGR00618 563 EQMQEIQQSFSIL----TQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQpEQDLQDVRLHLQQCS 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1339 KEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGElipLRQKVAE 1418
Cdd:TIGR00618 639 QELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRE---LETHIEE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1419 QERTAQQLRAEKASYAEQLSMLKKAHgllaeeNRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAEtrLAEVQREA 1498
Cdd:TIGR00618 716 YDREFNEIENASSSLGSDLAAREDAL------NQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAE--LSHLAAEI 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1499 QSTARELEvmtAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRlQAR 1578
Cdd:TIGR00618 788 QFFNRLRE---EDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQ-LAQ 863
|
650
....*....|....*...
gi 1622865026 1579 LNELQAQLSQKEQAAEHY 1596
Cdd:TIGR00618 864 LTQEQAKIIQLSDKLNGI 881
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
313-990 |
7.83e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.14 E-value: 7.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 313 ISQLLEENGDLSFKLREFASHLQQLQ-DALNELTEEHSRATQEWLEKQAQLEKELSTALqdkkcleekneILQGKLSqle 391
Cdd:PRK03918 73 IELKFEKNGRKYRIVRSFNRGESYLKyLDGSEVLEEGDSSVREWVERLIPYHVFLNAIY-----------IRQGEID--- 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 392 ehlALLRENPPQEKgeVLGDVLQLETLKQEAATLAANNTQLQARVETLETE---QGQQEAKLLAERDHFEEEKQQLSSLI 468
Cdd:PRK03918 139 ---AILESDESREK--VVRQILGLDDYENAYKNLGEVIKEIKRRIERLEKFikrTENIEELIKEKEKELEEVLREINEIS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 469 ANLQSSISNLSQAKEELEQASQAHG--ARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQAS 546
Cdd:PRK03918 214 SELPELREELEKLEKEVKELEELKEeiEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAE 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 547 QGLRhqVEQLSSSLKQKEQQLKEVAEKQEvtrrdhaqQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQV 626
Cdd:PRK03918 294 EYIK--LSEFYEEYLDELREIEKRLSRLE--------EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHEL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 627 ANEtrdsAQTSVTQAQREKAELSQK-VEELRARVETACREQHEAQAQVAELefqlqsEQQKATEKERVAQEKDQLQEqLQ 705
Cdd:PRK03918 364 YEE----AKAKKEELERLKKRLTGLtPEKLEKELEELEKAKEEIEEEISKI------TARIGELKKEIKELKKAIEE-LK 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 706 ALKESLKVTKGSLEEEKRraADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGlEARLQQLGEAHQaETEAL 785
Cdd:PRK03918 433 KAKGKCPVCGRELTEEHR--KELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKK-ESELIKLKELAE-QLKEL 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 786 RQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSEL 865
Cdd:PRK03918 509 EEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVE 588
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 866 QISRQQNELVELHANLARALQQVQEKEVRAQKLADdlstLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAG 945
Cdd:PRK03918 589 ELEERLKELEPFYNEYLELKDAEKELEREEKELKK----LEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEEL 664
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 1622865026 946 DREPEWLEeqqgRQFCSTQAALQAMEREAEQMGNELERLRAALME 990
Cdd:PRK03918 665 REEYLELS----RELAGLRAELEELEKRREEIKKTLEKLKEELEE 705
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
679-917 |
8.39e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 8.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 679 QLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRR---AADALEEQQRCISELKAETRSLVEQHKQEQK 755
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiaaLARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 756 ELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQrtaeseceQLVKEVAAWRERYEESQQEEaqygamfQEQL 835
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL--------QYLKYLAPARREQAEELRAD-------LAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 836 MTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKE 915
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
..
gi 1622865026 916 VA 917
Cdd:COG4942 243 TP 244
|
|
| valS |
PRK05729 |
valyl-tRNA synthetase; Reviewed |
1465-1584 |
1.00e-04 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 235582 [Multi-domain] Cd Length: 874 Bit Score: 47.41 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1465 LEVELDQAREKYVQELAAVRADAE--TRLAEVQREAQSTARELEVMTAKYEGAKVKV-LE-------ERQRFQEEKQKLT 1534
Cdd:PRK05729 745 LPLLLKGADAEDRARLEANEAYIKrlARLESLEILADDEEAPEGAASAVVGGAELFLpLEglidveaELARLEKELAKLE 824
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1535 AQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQA 1584
Cdd:PRK05729 825 KEIERVEKKLSNEGFVAKAPEEVVEKEREKLAEYEEKLAKLKERLARLKA 874
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
218-750 |
1.24e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.42 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 218 RLKKQLADERSNRDELELELAENRKLLtEKDAQIAMMQQRIDRlallnekqaasplepreleELRDKNESLtMRLHETLK 297
Cdd:pfam15921 378 QLQKLLADLHKREKELSLEKEQNKRLW-DRDTGNSITIDHLRR-------------------ELDDRNMEV-QRLEALLK 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 298 QcqdLKTE-KSQMDRKISQLLEENGDLSfKLREFASHLQQLQDALNELTEEHSrATQEWLEKQAQLEKELSTALQDKkcl 376
Cdd:pfam15921 437 A---MKSEcQGQMERQMAAIQGKNESLE-KVSSLTAQLESTKEMLRKVVEELT-AKKMTLESSERTVSDLTASLQEK--- 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 377 EEKNEILQGKLSQLEEHLALlrenppqekgevlgDVLQLETLKQEAATLaannTQLQARVETLETEqgqqeaklLAERDh 456
Cdd:pfam15921 509 ERAIEATNAEITKLRSRVDL--------------KLQELQHLKNEGDHL----RNVQTECEALKLQ--------MAEKD- 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 457 feeekqqlsSLIANLQSSISNLSQ---AKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKE--- 530
Cdd:pfam15921 562 ---------KVIEILRQQIENMTQlvgQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDlel 632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 531 EQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQlataAEEREASLRERDAALQQLEALE 610
Cdd:pfam15921 633 EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNK----SEEMETTTNKLKMQLKSAQSEL 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 611 KEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSeqqKATEK 690
Cdd:pfam15921 709 EQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELST---VATEK 785
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 691 ERVAQEKDQLQEQLQALKESLKVTKGSLEeekrRAADALEEQQRCISELKAETRSLVEQH 750
Cdd:pfam15921 786 NKMAGELEVLRSQERRLKEKVANMEVALD----KASLQFAECQDIIQRQEQESVRLKLQH 841
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
326-607 |
1.30e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 326 KLREFASHLQQLQDALNELTEEHSRATQEwlEKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQek 405
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAE--LDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDD-- 686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 406 gevlgdvlqLETLKQEAATLAANNTQLQARVETLETEQGQQEakllAERDHFEEEKQQLSSLIANLQSSISNLSQAKEEl 485
Cdd:COG4913 687 ---------LAALEEQLEELEAELEELEEELDELKGEIGRLE----KELEQAEEELDELQDRLEAAEDLARLELRALLE- 752
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 486 EQASQAHGARLTAQV-ASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSS-LKQK 563
Cdd:COG4913 753 ERFAAALGDAVERELrENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDgLPEY 832
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1622865026 564 EQQLKEVAEKQEVTRRDH-AQQLATAAEEREASLRERDAALQQLE 607
Cdd:COG4913 833 EERFKELLNENSIEFVADlLSKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1047-1501 |
1.52e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1047 TLQEALAHALTEK-EGKDQELVKLRG----LEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPK 1121
Cdd:COG4717 38 TLLAFIRAMLLERlEKEADELFKPQGrkpeLNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREE 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1122 LEALR---------AEVSKLEQQCQQQQEQADSLERSLEAER---ASRAERDSALETLQGQLEEKARELG-HSQSALASV 1188
Cdd:COG4717 118 LEKLEkllqllplyQELEALEAELAELPERLEELEERLEELReleEELEELEAELAELQEELEELLEQLSlATEEELQDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1189 QRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSIL-NRQVLEKEGESKELKRLVMAESEKSQKLED 1267
Cdd:COG4717 198 AEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKeARLLLLIAAALLALLGLGGSLLSLILTIAG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1268 RLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTS-------QAERAEELGQELKAWQEKFFQKE 1340
Cdd:COG4717 278 VLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAAlglppdlSPEELLELLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1341 QALSTLQLEHtsTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAgglrAELLRAQRELGELIPLRQKVAEQE 1420
Cdd:COG4717 358 ELEEELQLEE--LEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEEL----EEQLEELLGELEELLEALDEEELE 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1421 RTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQS 1500
Cdd:COG4717 432 EELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYRE 511
|
.
gi 1622865026 1501 T 1501
Cdd:COG4717 512 E 512
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
335-616 |
1.67e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.93 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 335 QQLQDALNELTEEHSRATQEWLEKQAqlekelstalqdkkcleeknEILQGKLSQLEEHLALLRENppqekgevlgdvLQ 414
Cdd:COG3206 159 EAYLEQNLELRREEARKALEFLEEQL--------------------PELRKELEEAEAALEEFRQK------------NG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 415 LETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANlqssiSNLSQAKEELeqasqahgA 494
Cdd:COG3206 207 LVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS-----PVIQQLRAQL--------A 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 495 RLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEqasQGLRHQVEQLSSSLKQKEQQLKEVAEKQ 574
Cdd:COG3206 274 ELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAEL---EALQAREASLQAQLAQLEARLAELPELE 350
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1622865026 575 evtrrdhaQQLATAAEEREASLRERDAALQQLEALEKEKAAK 616
Cdd:COG3206 351 --------AELRRLEREVEVARELYESLLQRLEEARLAEALT 384
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
414-740 |
1.68e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 46.75 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 414 QLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSIS---------NLSQAKEE 484
Cdd:PRK04778 120 DIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFSFGPALDELEKQLENLEEEFSqfveltesgDYVEAREI 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 485 LEQAsQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqtlqqqeqasQGLRHQVEQLSSSLKQKE 564
Cdd:PRK04778 200 LDQL-EEELAALEQIMEEIPELLKELQTELPDQLQELKAGYRELVE----------------EGYHLDHLDIEKEIQDLK 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 565 QQLKEVAEKQEVTRRDHAQQLATAAEEReaslrerdaaLQQL-EALEKEKAAKleilqqqlQVANETRDSAQTSVTQAQR 643
Cdd:PRK04778 263 EQIDENLALLEELDLDEAEEKNEEIQER----------IDQLyDILEREVKAR--------KYVEKNSDTLPDFLEHAKE 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 644 EKAELSQKVEELRARVETACRE---QHEAQAQVAELEFQLQSEQQKATEK--------ERVAQEKDQLqEQLQALKESLK 712
Cdd:PRK04778 325 QNKELKEEIDRVKQSYTLNESElesVRQLEKQLESLEKQYDEITERIAEQeiayselqEELEEILKQL-EEIEKEQEKLS 403
|
330 340
....*....|....*....|....*...
gi 1622865026 713 VTKGSLEEEKRRAADALEEQQRCISELK 740
Cdd:PRK04778 404 EMLQGLRKDELEAREKLERYRNKLHEIK 431
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
231-864 |
1.70e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.89 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 231 DELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPRELEELRdknesltmRLHETLKQCQDLKTEKSQMD 310
Cdd:TIGR00618 249 REAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIK--------AVTQIEQQAQRIHTELQSKM 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 311 RKISQLLEENGDL---SFKLREFASHLQQLQDALNELTEEHSRAT--QEWLEKQAQLEKELSTALQDKKCLEEKNEILQG 385
Cdd:TIGR00618 321 RSRAKLLMKRAAHvkqQSSIEEQRRLLQTLHSQEIHIRDAHEVATsiREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCK 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 386 KLSQLEEHLA-----LLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEE 460
Cdd:TIGR00618 401 ELDILQREQAtidtrTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 461 KQQLSSLIANLQSSISNLSQAKEELEQASQAH---GARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQ 537
Cdd:TIGR00618 481 IHLQETRKKAVVLARLLELQEEPCPLCGSCIHpnpARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRAS 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 538 TLQQQEQASQGLRHQVEQLSSS------LKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEK 611
Cdd:TIGR00618 561 LKEQMQEIQQSFSILTQCDNRSkedipnLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQE 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 612 EKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQ-KVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEK 690
Cdd:TIGR00618 641 LALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQlALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREF 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 691 ERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRA--ADALEEQQRCISELKAETRSLVEQHKQEQKELEeekagRKGLE 768
Cdd:TIGR00618 721 NEIENASSSLGSDLAAREDALNQSLKELMHQARTVlkARTEAHFNNNEEVTAALQTGAELSHLAAEIQFF-----NRLRE 795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 769 ARLQQLgeahqAETEALRQELAEAIAAQRTAesECEQLVKEVAAWRERYEESQQEeaqygamfQEQLMTLKEECEKARQE 848
Cdd:TIGR00618 796 EDTHLL-----KTLEAEIGQEIPSDEDILNL--QCETLVQEEEQFLSRLEEKSAT--------LGEITHQLLKYEECSKQ 860
|
650
....*....|....*.
gi 1622865026 849 LQEAKEKVAGIESHSE 864
Cdd:TIGR00618 861 LAQLTQEQAKIIQLSD 876
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
227-655 |
2.25e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.48 E-value: 2.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 227 RSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnekqaasplepRELEELRDKNESLTMRLHETLKQCQDLKTEK 306
Cdd:COG3096 277 ANERRELSERALELRRELFGARRQLAEEQYRLVEMA-------------RELEELSARESDLEQDYQAASDHLNLVQTAL 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 307 SQMDrKISQLLEENGDLSFKLREfashlqqLQDALNELTEEHSRAtQEWLEkQAQLE-KELSTALQDkkcLEEKNEILQG 385
Cdd:COG3096 344 RQQE-KIERYQEDLEELTERLEE-------QEEVVEEAAEQLAEA-EARLE-AAEEEvDSLKSQLAD---YQQALDVQQT 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 386 KLSQLEEHLALLrenppqEKGEVLgdvLQLETLKQEAA--TLAANNTQLQARVET-LETEQGQQEAKllAERDHFEEEKQ 462
Cdd:COG3096 411 RAIQYQQAVQAL------EKARAL---CGLPDLTPENAedYLAAFRAKEQQATEEvLELEQKLSVAD--AARRQFEKAYE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 463 QLSSLIANLQSSISNlSQAKEELEQA-SQAHgarLTAQVASLTSELTTLNATIQQQdqeladlkQQAKEEQAQLAQTLQQ 541
Cdd:COG3096 480 LVCKIAGEVERSQAW-QTARELLRRYrSQQA---LAQRLQQLRAQLAELEQRLRQQ--------QNAERLLEEFCQRIGQ 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 542 QEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRR--DHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEI 619
Cdd:COG3096 548 QLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQqlEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQE 627
|
410 420 430
....*....|....*....|....*....|....*.
gi 1622865026 620 LQQQLQVANETRDSAQTSVTQAQREKAELSQKVEEL 655
Cdd:COG3096 628 VTAAMQQLLEREREATVERDELAARKQALESQIERL 663
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
300-531 |
2.26e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 300 QDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEwlekQAQLEKELSTalqdkkcLEEK 379
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE----LAALEAELAE-------LEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 380 NEILQGKLSQLEEHLA-LLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEaKLLAERDHFE 458
Cdd:COG4942 92 IAELRAELEAQKEELAeLLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA-ELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 459 EEKQQLSSLIANLQssisnlsQAKEELEQASQAHG---ARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEE 531
Cdd:COG4942 171 AERAELEALLAELE-------EERAALEALKAERQkllARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1164-1683 |
2.29e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.17 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1164 LETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLE 1243
Cdd:TIGR04523 42 LKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1244 KEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAaerssalreevqslrEEAEKQRvasENLRQELTSQAERAE 1323
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKY---------------NDLKKQK---EELENELNLLEKEKL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1324 ELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKhlcqqlqaeqaAAEKRHREELEQSKQAAGGLRAELLRAQ 1403
Cdd:TIGR04523 184 NIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELK-----------KQNNQLKDNIEKKQQEINEKTTEISNTQ 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1404 RELGELIPLRQKVAEQ-----------ERTAQQLRAEKASYAEQLSMLK--KAHGLLAEENRGLGERANLGRQfLEVELD 1470
Cdd:TIGR04523 253 TQLNQLKDEQNKIKKQlsekqkeleqnNKKIKELEKQLNQLKSEISDLNnqKEQDWNKELKSELKNQEKKLEE-IQNQIS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1471 QArEKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEgakvKVLEERQRFQEEKQKLTAQVEELRKKLADSDQA 1550
Cdd:TIGR04523 332 QN-NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE----KLKKENQSYKQEIKNLESQINDLESKIQNQEKL 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1551 SKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQ----LQSLEH 1626
Cdd:TIGR04523 407 NQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSinkiKQNLEQ 486
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 1627 LQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDL 1683
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDL 543
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
554-1351 |
2.29e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.65 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 554 EQLSSSLKQKEQQLKEVAEKQEVTRRDHaqqlataaEEREASLRERDAALQ-QLEALEKEKAAKLEILQQQLQVANETRD 632
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELH--------EKQKFYLRQSVIDLQtKLQEMQMERDAMADIRRRESQSQEDLRN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 633 SAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEK--ERVAQEKDQLQEQLQALKES 710
Cdd:pfam15921 146 QLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKiyEHDSMSTMHFRSLGSAISKI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 711 LKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHkqeqkeleeekagrkglEARLQQLGEAHQAETEALRQELA 790
Cdd:pfam15921 226 LRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQH-----------------QDRIEQLISEHEVEITGLTEKAS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 791 EAIAAQRTAESECEQLvkevaawreryeesQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQ 870
Cdd:pfam15921 289 SARSQANSIQSQLEII--------------QEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLA 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 871 QNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARL-----------ETLVRKAGEQQETASRelVK 939
Cdd:pfam15921 355 NSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLwdrdtgnsitiDHLRRELDDRNMEVQR--LE 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 940 EPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRaALMESQGQQQEERGQQEREVARLTQERGRAQAD 1019
Cdd:pfam15921 433 ALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLR-KVVEELTAKKMTLESSERTVSDLTASLQEKERA 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1020 LALEKAAKAELEMRLQNALNEQRvEFATLQEALAHALTEKEGkdqelvkLRGLEAAQIKELEELRQTMKQLKEQLAKKEK 1099
Cdd:pfam15921 512 IEATNAEITKLRSRVDLKLQELQ-HLKNEGDHLRNVQTECEA-------LKLQMAEKDKVIEILRQQIENMTQLVGQHGR 583
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1100 ehASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRA--ERDSALETLQGQLEEKARE 1177
Cdd:pfam15921 584 --TAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAgsERLRAVKDIKQERDQLLNE 661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1178 LGHSQSALASVQRELAAL----RTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEE------EVSI-LNRQVLEKEG 1246
Cdd:pfam15921 662 VKTSRNELNSLSEDYEVLkrnfRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGsdghamKVAMgMQKQITAKRG 741
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1247 ESKELKRLVMAESEKSQKLEDRLRLLQAEtasnSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELG 1326
Cdd:pfam15921 742 QIDALQSKIQFLEEAMTNANKEKHFLKEE----KNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKAS 817
|
810 820
....*....|....*....|....*
gi 1622865026 1327 QELKAWQEKFFQKEQALSTLQLEHT 1351
Cdd:pfam15921 818 LQFAECQDIIQRQEQESVRLKLQHT 842
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
202-855 |
2.44e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.25 E-value: 2.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 202 ASPMGDILQTPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLA------------------- 262
Cdd:pfam05483 73 SEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSlkleeeiqenkdlikenna 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 263 ------LLNEKQAASPLEPRE-------------------------LEELRDKNESLTMRLHETLKQC--------QDLK 303
Cdd:pfam05483 153 trhlcnLLKETCARSAEKTKKyeyereetrqvymdlnnniekmilaFEELRVQAENARLEMHFKLKEDhekiqhleEEYK 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 304 TEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEE---HSRATQEWLEKQAQLEKEL-------STALQDK 373
Cdd:pfam05483 233 KEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKtklQDENLKELIEKKDHLTKELedikmslQRSMSTQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 374 KCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLET--------LKQEAATLAANNTQLQARVETLETEQGQ 445
Cdd:pfam05483 313 KALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEAttcsleelLRTEQQRLEKNEDQLKIITMELQKKSSE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 446 QEaKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAK---EELEQASQAHGARLTA---QVASLTSELTTLNATIQQQDQ 519
Cdd:pfam05483 393 LE-EMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEkiaEELKGKEQELIFLLQArekEIHDLEIQLTAIKTSEEHYLK 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 520 ELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQqlATAAEEREASLREr 599
Cdd:pfam05483 472 EVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQ--IENLEEKEMNLRD- 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 600 daalqQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQaqvaelefq 679
Cdd:pfam05483 549 -----ELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELH--------- 614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 680 lqsEQQKATEKERVAQEKdqlqeQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEE 759
Cdd:pfam05483 615 ---QENKALKKKGSAENK-----QLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADE 686
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 760 EKAGRKGLEARLQqlgeahqaetealrQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLK 839
Cdd:pfam05483 687 AVKLQKEIDKRCQ--------------HKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIK 752
|
730
....*....|....*.
gi 1622865026 840 EECEKARQELQEAKEK 855
Cdd:pfam05483 753 AELLSLKKQLEIEKEE 768
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
414-713 |
2.81e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.66 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 414 QLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHg 493
Cdd:COG4372 32 QLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 494 ARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEK 573
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLK 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 574 QEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVE 653
Cdd:COG4372 191 EANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVE 270
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 654 ELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKV 713
Cdd:COG4372 271 KDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLEL 330
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1732-2002 |
2.96e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1732 PDGTSVPGEPASPISQRlPPKVESLESLYFTPIPARSQA--PLESSLDSLGDVFLDSGRKTRSARRRTTQIINITMTKKL 1809
Cdd:PHA03307 192 EPPPSTPPAAASPRPPR-RSSPISASASSPAPAPGRSAAddAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIW 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1810 DVEEPDSANSSFYSTRSAPASQASLRATSSTQSLARLSSPdyGNSALLSLPGYRP-----TTRSSARRSQAGVSSGAPPG 1884
Cdd:PHA03307 271 EASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPS--SPRASSSSSSSREsssssTSSSSESSRGAAVSPGPSPS 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1885 RNsfymGTCQDEPeqldDWNRIAELQQRnrvCPPHLKTCYPLESRPSlslgtitdeemktgdpqETLRRASMQ---PIQI 1961
Cdd:PHA03307 349 RS----PSPSRPP----PPADPSSPRKR---PRPSRAPSSPAASAGR-----------------PTRRRARAAvagRARR 400
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1622865026 1962 AEGTGITTRQQRKRVSLEPHQGPGTPESKkatscfPRPMTP 2002
Cdd:PHA03307 401 RDATGRFPAGRPRPSPLDAGAASGAFYAR------YPLLTP 435
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
207-929 |
3.06e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 207 DILQTPQF--QMRRLKKQLADERSNRDELELELaenRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPRELEELRDK 284
Cdd:TIGR00606 177 EIFSATRYikALETLRQVRQTQGQKVQEHQMEL---KYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNR 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 285 NEsltmRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFashLQQLQDALNELTEEHSRATQEWLEKQAQLEK 364
Cdd:TIGR00606 254 LK----EIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKV---FQGTDEQLNDLYHNHQRTVREKERELVDCQR 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 365 ELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQlqaRVETLETEQG 444
Cdd:TIGR00606 327 ELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIK---NFHTLVIERQ 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 445 QQEAKLLAErdhfeeekqqlssLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADL 524
Cdd:TIGR00606 404 EDEAKTAAQ-------------LCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSS 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 525 KQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQL--KEVAEKQEVTRRDH-----AQQLATAAEEREASLR 597
Cdd:TIGR00606 471 DRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLdrKLRKLDQEMEQLNHhtttrTQMEMLTKDKMDKDEQ 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 598 ERDAALQ----------------QLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVET 661
Cdd:TIGR00606 551 IRKIKSRhsdeltsllgyfpnkkQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFD 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 662 ACREQHE-------------AQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADA 728
Cdd:TIGR00606 631 VCGSQDEesdlerlkeeiekSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 729 LEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQE--LAEAIAAQRTAESECEQL 806
Cdd:TIGR00606 711 LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQetLLGTIMPEEESAKVCLTD 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 807 VKEVAAWRERYEESQQEEAQYGAmfQEQLMTLKEECEKARQELQEAKEKVAGIESHSEL--QISRQQNELVElhaNLARA 884
Cdd:TIGR00606 791 VTIMERFQMELKDVERKIAQQAA--KLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELnrKLIQDQQEQIQ---HLKSK 865
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1622865026 885 LQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQ 929
Cdd:TIGR00606 866 TNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
768-1037 |
3.15e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 768 EARLQQLGEAHQAETEALRQELAEAIAAQRTAES-------------ECEQLVKEVA-AWRERYEESQQEEAQYGAMF-Q 832
Cdd:COG3206 102 KLNLDEDPLGEEASREAAIERLRKNLTVEPVKGSnvieisytspdpeLAAAVANALAeAYLEQNLELRREEARKALEFlE 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 833 EQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQneLVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAAT 912
Cdd:COG3206 182 EQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQ--LSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 913 SKevarlETLVRKAGEQQETASRELVKEPARAGDREP-------------EWLEEQQGRQFCSTQAALQAMEREAEQMGN 979
Cdd:COG3206 260 LQ-----SPVIQQLRAQLAELEAELAELSARYTPNHPdvialraqiaalrAQLQQEAQRILASLEAELEALQAREASLQA 334
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 980 ELERLRAALMEsqgqqqeeRGQQEREVARLTQERGRAQA--DLALEKAAKAELEMRLQNA 1037
Cdd:COG3206 335 QLAQLEARLAE--------LPELEAELRRLEREVEVARElyESLLQRLEEARLAEALTVG 386
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
587-802 |
3.29e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 587 TAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQ 666
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 667 HEAQAQVAELEFQLQSEQ-----QKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEK---RRAADALEEQQRCISE 738
Cdd:COG3883 96 YRSGGSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLaelEALKAELEAAKAELEA 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622865026 739 LKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESE 802
Cdd:COG3883 176 QQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1016-1255 |
3.39e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1016 AQADLAleKAAKAELEmRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLA 1095
Cdd:COG4942 17 AQADAA--AEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1096 KKEKEhasgsgaqseaagrteptgpkLEALRAEVSKLeQQCQQQQEQADSLERSLEAERASRAERDSA-LETLQGQLEEK 1174
Cdd:COG4942 94 ELRAE---------------------LEAQKEELAEL-LRALYRLGRQPPLALLLSPEDFLDAVRRLQyLKYLAPARREQ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1175 ARELGHSQSALASVQRELAALRTKVQdhsKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRL 1254
Cdd:COG4942 152 AEELRADLAELAALRAELEAERAELE---ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
.
gi 1622865026 1255 V 1255
Cdd:COG4942 229 I 229
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1181-1574 |
3.44e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.82 E-value: 3.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1181 SQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEA-----ERKNSLISSLEEEVSILNRQVLekegeSKELKRLV 1255
Cdd:PRK10929 14 SWGAYAATAPDEKQITQELEQAKAAKTPAQAEIVEALQSAlnwleERKGSLERAKQYQQVIDNFPKL-----SAELRQQL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1256 MAESEKSQKLEDRL-------RLLQAetasnsaraaerSSALREEVQSLREEAEKQRVASENLRQ--ELTSQAERA-EEL 1325
Cdd:PRK10929 89 NNERDEPRSVPPNMstdaleqEILQV------------SSQLLEKSRQAQQEQDRAREISDSLSQlpQQQTEARRQlNEI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1326 GQELKAWQEKFFQKEQALST-LQLEHTSTQALVSELlpakhlcqqlqaeqaaaekrhreELEQ----SKQAAGGLRAELL 1400
Cdd:PRK10929 157 ERRLQTLGTPNTPLAQAQLTaLQAESAALKALVDEL-----------------------ELAQlsanNRQELARLRSELA 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1401 --RAQRELGELIPLRQKVAEQertaQQLRAEKASYAEQLsmlkkahglLAEENRGLGEraNLGRQF-LEVELDQAREKYV 1477
Cdd:PRK10929 214 kkRSQQLDAYLQALRNQLNSQ----RQREAERALESTEL---------LAEQSGDLPK--SIVAQFkINRELSQALNQQA 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1478 QELAAVRADAETRLAEVQ--REAQSTARE----LEVMTAKYEG--AKVKVLEERQRFQE---EKQKLTAQ---VEELRKK 1543
Cdd:PRK10929 279 QRMDLIASQQRQAASQTLqvRQALNTLREqsqwLGVSNALGEAlrAQVARLPEMPKPQQldtEMAQLRVQrlrYEDLLNK 358
|
410 420 430
....*....|....*....|....*....|.
gi 1622865026 1544 LADSDQASKVQQQKLKAVQAQGGESQQEAQR 1574
Cdd:PRK10929 359 QPQLRQIRQADGQPLTAEQNRILDAQLRTQR 389
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
572-749 |
4.31e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 4.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 572 EKQEVTRRDHAQQLATAAEEREASLRER-DAALQQLEALEKEKaaKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQ 650
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKElEEAEAALEEFRQKN--GLVDLSEEAKLLLQQLSELESQLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 651 KVEELRARVETACREQHEA---------QAQVAELEFQLQSEQQKATEKERVAQekdQLQEQLQALKESLKVTKGSLEEE 721
Cdd:COG3206 241 RLAALRAQLGSGPDALPELlqspviqqlRAQLAELEAELAELSARYTPNHPDVI---ALRAQIAALRAQLQQEAQRILAS 317
|
170 180
....*....|....*....|....*...
gi 1622865026 722 KRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG3206 318 LEAELEALQAREASLQAQLAQLEARLAE 345
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
196-452 |
5.01e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 5.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 196 FLSGSPASPMGDILQTPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLallnEKQAAspLEP 275
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRAL----EQELA--ALE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 276 RELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEW 355
Cdd:COG4942 83 AELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 356 LEKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLREnppqekgevlgdvlQLETLKQEAATLAANNTQLQAR 435
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEK--------------ELAELAAELAELQQEAEELEAL 228
|
250
....*....|....*..
gi 1622865026 436 VETLETEQGQQEAKLLA 452
Cdd:COG4942 229 IARLEAEAAAAAERTPA 245
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
556-692 |
6.14e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.19 E-value: 6.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 556 LSSSLKQKEQQLKEVAEK-QEVTR-----RDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANE 629
Cdd:PRK09039 44 LSREISGKDSALDRLNSQiAELADllsleRQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQ 123
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 630 TRDSAQTSVTQAQREKAELSQKVEELR---ARVETAC----REQHEAQAQVAELEFQLQSE-QQKATEKER 692
Cdd:PRK09039 124 ELDSEKQVSARALAQVELLNQQIAALRrqlAALEAALdaseKRDRESQAKIADLGRRLNVAlAQRVQELNR 194
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
604-827 |
6.53e-04 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 44.68 E-value: 6.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 604 QQLEALEKEKAAKLEILQQQLQvaneTRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQlQSE 683
Cdd:PRK11637 47 DQLKSIQQDIAAKEKSVRQQQQ----QRASLLAQLKKQEEAISQASRKLRETQNTLNQLNKQIDELNASIAKLEQQ-QAA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 684 QQKATEKE-----RVAQ----------EKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVE 748
Cdd:PRK11637 122 QERLLAAQldaafRQGEhtglqlilsgEESQRGERILAYFGYLNQARQETIAELKQTREELAAQKAELEEKQSQQKTLLY 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 749 QHKQEQKELEEEKAGRK----GLEARL----QQLGEAHQAETEaLRQELAEaiaAQRTAESECEQLVKEVAAWRERYEES 820
Cdd:PRK11637 202 EQQAQQQKLEQARNERKktltGLESSLqkdqQQLSELRANESR-LRDSIAR---AEREAKARAEREAREAARVRDKQKQA 277
|
....*..
gi 1622865026 821 QQEEAQY 827
Cdd:PRK11637 278 KRKGSTY 284
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1045-1201 |
6.94e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.19 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1045 FATLQEALAHALTekeGKDQELVKLrgleAAQIKELEEL----RQTMKQLKEQLAKkekEHASGSGAQSEAAgrteptgp 1120
Cdd:PRK09039 37 FVVAQFFLSREIS---GKDSALDRL----NSQIAELADLlsleRQGNQDLQDSVAN---LRASLSAAEAERS-------- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1121 KLEALRAEVSkleQQCQQQQEQADSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQ 1200
Cdd:PRK09039 99 RLQALLAELA---GAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIA 175
|
.
gi 1622865026 1201 D 1201
Cdd:PRK09039 176 D 176
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
582-829 |
7.71e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.90 E-value: 7.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 582 AQQLATAAEEREASLRERDAALQQLEALEKEKAAKLE--ILQQQLQvanetrdSAQTSVTQAQREKAELsqkvEELRARV 659
Cdd:PRK11281 21 CLSSAFARAASNGDLPTEADVQAQLDALNKQKLLEAEdkLVQQDLE-------QTLALLDKIDRQKEET----EQLKQQL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 660 ETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKE---------SLKVTKGSLEEekrRAADALE 730
Cdd:PRK11281 90 AQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQNaqndlaeynSQLVSLQTQPE---RAQAALY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 731 EQQRCISELKAETRSL-VEQHKQEQKELEEEKAGRKGLEAR-------------LQQLGE-------AHQAETEALRQEL 789
Cdd:PRK11281 167 ANSQRLQQIRNLLKGGkVGGKALRPSQRVLLQAEQALLNAQndlqrkslegntqLQDLLQkqrdyltARIQRLEHQLQLL 246
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1622865026 790 AEAIAAQRTAESecEQLVKEVaawreryeESQQEEAQYGA 829
Cdd:PRK11281 247 QEAINSKRLTLS--EKTVQEA--------QSQDEAARIQA 276
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
300-555 |
8.08e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 8.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 300 QDLKTEKSQMDRKISQLLEENGDLSF---KLREFASHLQQLQDALNELTEEHsratqeWLEKQAQLEKELSTALQDKKCL 376
Cdd:PRK04863 840 RQLNRRRVELERALADHESQEQQQRSqleQAKEGLSALNRLLPRLNLLADET------LADRVEEIREQLDEAEEAKRFV 913
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 377 EEKneilQGKLSQLEEHLALLRENPPQE---KGEVLGDVLQLETLKQEAATL----------------------AANNTQ 431
Cdd:PRK04863 914 QQH----GNALAQLEPIVSVLQSDPEQFeqlKQDYQQAQQTQRDAKQQAFALtevvqrrahfsyedaaemlaknSDLNEK 989
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 432 LQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSlianLQSSISNLSQAKEELEQASQAHGARLTA----QVASLTSEL 507
Cdd:PRK04863 990 LRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLAS----LKSSYDAKRQMLQELKQELQDLGVPADSgaeeRARARRDEL 1065
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1622865026 508 TTLNATIQQQDQELadLKQQAKEEQAQLAQTLQ--QQEQASQGLRHQVEQ 555
Cdd:PRK04863 1066 HARLSANRSRRNQL--EKQLTFCEAEMDNLTKKlrKLERDYHEMREQVVN 1113
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1007-1488 |
8.33e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 8.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1007 ARLTQERGRAQADLALEKAAKAELEMRL-QNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRG-LEAAQIKELEELR 1084
Cdd:COG4913 265 AAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAELERLEARLDALREELDELEAqIRGNGGDRLEQLE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1085 QTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVskleqqcqqqQEQADSLERSLEAERASRAERDSAL 1164
Cdd:COG4913 345 REIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA----------AALLEALEEELEALEEALAEAEAAL 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1165 ETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKA--------------------------------------E 1206
Cdd:COG4913 415 RDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLdeaelpfvgelievrpeeerwrgaiervlggfaltllvP 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1207 DEWKAQVAR------------------GRQEAERKNSLISSLEEEVSI--------LNRQVLEKEG----ES-KELKRLV 1255
Cdd:COG4913 495 PEHYAAALRwvnrlhlrgrlvyervrtGLPDPERPRLDPDSLAGKLDFkphpfrawLEAELGRRFDyvcvDSpEELRRHP 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1256 MAESEKSQ-KLEDRLRLLQAETASNSA-----RAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQ-- 1327
Cdd:COG4913 575 RAITRAGQvKGNGTRHEKDDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRla 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1328 -------ELKAWQEKFFQKEQALSTLQLEHTSTQALVSELlpakhlcqqlqAEQAAAEKRHREELEQSKQAAGGLRAELL 1400
Cdd:COG4913 655 eyswdeiDVASAEREIAELEAELERLDASSDDLAALEEQL-----------EELEAELEELEEELDELKGEIGRLEKELE 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1401 RAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLS-MLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQE 1479
Cdd:COG4913 724 QAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDaVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAE 803
|
....*....
gi 1622865026 1480 LAAVRADAE 1488
Cdd:COG4913 804 TADLDADLE 812
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
236-605 |
9.35e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.56 E-value: 9.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 236 ELAENRKLLTEKDAQIAMMQQRIDRLAL---------LNEKQAASPLEprELEELRDKNESLTMRLHETLKQCQDLKTEK 306
Cdd:COG3096 789 ELRAERDELAEQYAKASFDVQKLQRLHQafsqfvgghLAVAFAPDPEA--ELAALRQRRSELERELAQHRAQEQQLRQQL 866
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 307 SQMDRKISQL--------LEENGDLSFKLREFASHLQQLQDALNELTEEHSRAtqewlekqAQLEKELSTALQDKkcleE 378
Cdd:COG3096 867 DQLKEQLQLLnkllpqanLLADETLADRLEELREELDAAQEAQAFIQQHGKAL--------AQLEPLVAVLQSDP----E 934
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 379 KNEILQGKLSQLEEHLALLrenppQEKGEVLGDVLQLET---LKQEAATLAAN---NTQLQARVETLETEQGQQEAKLLA 452
Cdd:COG3096 935 QFEQLQADYLQAKEQQRRL-----KQQIFALSEVVQRRPhfsYEDAVGLLGENsdlNEKLRARLEQAEEARREAREQLRQ 1009
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 453 ERDHFEEEKQQLSSLIANLQSSISNLSQAKEEL-----------EQASQAHGARLTAQVASLTSELTTLNATIQQQDQEL 521
Cdd:COG3096 1010 AQAQYSQYNQVLASLKSSRDAKQQTLQELEQELeelgvqadaeaEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEM 1089
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 522 ADLKQQAKEEQAQLaqtlqqqeqasQGLRHQVEQlsssLKQKEQQLKEVAEKQEVTRRDHAQQLA-TAAEEREASLRERD 600
Cdd:COG3096 1090 DSLQKRLRKAERDY-----------KQEREQVVQ----AKAGWCAVLRLARDNDVERRLHRRELAyLSADELRSMSDKAL 1154
|
....*
gi 1622865026 601 AALQQ 605
Cdd:COG3096 1155 GALRL 1159
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
209-788 |
9.45e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 9.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 209 LQTPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLAllneKQAASPLEPRELE--------- 279
Cdd:TIGR00618 281 ETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHV----KQQSSIEEQRRLLqtlhsqeih 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 280 ------------ELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEE 347
Cdd:TIGR00618 357 irdahevatsirEISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQ 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 348 HSRATQEWL--EKQAQLEKELSTALQD--------KKCLEEKNEILQGKLSQLEEHLALLRENPPQEKgEVLGDVLQLET 417
Cdd:TIGR00618 437 QRYAELCAAaiTCTAQCEKLEKIHLQEsaqslkerEQQLQTKEQIHLQETRKKAVVLARLLELQEEPC-PLCGSCIHPNP 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 418 LKQEAATLAANNTQLQA---RVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEqasqahga 494
Cdd:TIGR00618 516 ARQDIDNPGPLTRRMQRgeqTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIP-------- 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 495 rltaqvaSLTSELTTLNATIQQQDqELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVA-EK 573
Cdd:TIGR00618 588 -------NLQNITVRLQDLTEKLS-EAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTqER 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 574 QEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVA-------NETRDSAQTSVTQAQREKA 646
Cdd:TIGR00618 660 VREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIeeydrefNEIENASSSLGSDLAARED 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 647 ELSQKVEELRARVETACREQHEAQAQVAElefQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAA 726
Cdd:TIGR00618 740 ALNQSLKELMHQARTVLKARTEAHFNNNE---EVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDE 816
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622865026 727 DALEEQQRCISELKAETRSLVEQHKQEQKELEEEKagrKGLEARLQQLGEAHQAETEALRQE 788
Cdd:TIGR00618 817 DILNLQCETLVQEEEQFLSRLEEKSATLGEITHQL---LKYEECSKQLAQLTQEQAKIIQLS 875
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
307-527 |
9.47e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.23 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 307 SQMDR----KISQLLEENGDLSFKLRefasHLQQLQDALNELTEEHSRATQEWL-EKQAQLEKELSTALQDKKCLEEKNE 381
Cdd:PHA02562 166 SEMDKlnkdKIRELNQQIQTLDMKID----HIQQQIKTYNKNIEEQRKKNGENIaRKQNKYDELVEEAKTIKAEIEELTD 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 382 ILQGKLSQLE---EHLALLRENPPQEKGEV--LGDVLQLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDH 456
Cdd:PHA02562 242 ELLNLVMDIEdpsAALNKLNTAAAKIKSKIeqFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTA 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 457 FEEEKQ------QLSSLIANLQSSISNLSQA-KEELEQASQAHGA--RLTAQVASLTSELTTLNATIQQQDQELADLKQQ 527
Cdd:PHA02562 322 IDELEEimdefnEQSKKLLELKNKISTNKQSlITLVDKAKKVKAAieELQAEFVDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1167-1641 |
9.95e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 9.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1167 LQGQLEEKARELGHSQ-SALASVQRELAALRTKVQDHSKAEDEWKAQVARgrqeaerknslISSLEEEVSILNRQVLEKE 1245
Cdd:COG4717 47 LLERLEKEADELFKPQgRKPELNLKELKELEEELKEAEEKEEEYAELQEE-----------LEELEEELEELEAELEELR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1246 GESKELKRLVMAES--EKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAE 1323
Cdd:COG4717 116 EELEKLEKLLQLLPlyQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1324 ELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELlpakhlcqqLQAEQAAAEKRHREELEQSKQAAG------GLRA 1397
Cdd:COG4717 196 DLAEELEELQQRLAELEEELEEAQEELEELEEELEQL---------ENELEAAALEERLKEARLLLLIAAallallGLGG 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1398 ELLRAQRELGELIPLRQKVAEQErtAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYV 1477
Cdd:COG4717 267 SLLSLILTIAGVLFLVLGLLALL--FLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLD 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1478 QELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLA--DSDQASKVQQ 1555
Cdd:COG4717 345 RIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEelLGELEELLEA 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1556 QKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEhyklQMEKAKTHYDAKkqqnqelqeqlQSLEHLQKENKELR 1635
Cdd:COG4717 425 LDEEELEEELEELEEELEELEEELEELREELAELEAELE----QLEEDGELAELL-----------QELEELKAELRELA 489
|
....*.
gi 1622865026 1636 AEAERL 1641
Cdd:COG4717 490 EEWAAL 495
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
561-789 |
1.03e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.34 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 561 KQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKL-EILQQQLQVANETRDSAQTSVT 639
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIqQQKVEMEQIRAEQEEARQREVR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 640 QAQREKAELSQKV--EELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGS 717
Cdd:pfam17380 439 RLEEERAREMERVrlEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLL 518
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 718 LEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQ-AETEALRQEL 789
Cdd:pfam17380 519 EKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQiVESEKARAEY 591
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1037-1595 |
1.16e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.06 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1037 ALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSgaqSEAAGRTE 1116
Cdd:pfam12128 235 GIMKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKR---DELNGELS 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1117 PTGPKLEALRAEVSKLEqqcqqqqeqaDSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALR 1196
Cdd:pfam12128 312 AADAAVAKDRSELEALE----------DQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRR 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1197 TKVQDHSKA------EDEWKAQVARGRQEAERKN---SLISSLEEEVSILNRQVLEKE-------GESKELKRLVMAESE 1260
Cdd:pfam12128 382 SKIKEQNNRdiagikDKLAKIREARDRQLAVAEDdlqALESELREQLEAGKLEFNEEEyrlksrlGELKLRLNQATATPE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1261 KSQKLEDRLRLLQAETASNSARAAERSSALREEVQ--SLREEA-----------EKQRVASENLRQELTSQAERAEE-LG 1326
Cdd:pfam12128 462 LLLQLENFDERIERAREEQEAANAEVERLQSELRQarKRRDQAsealrqasrrlEERQSALDELELQLFPQAGTLLHfLR 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1327 QELKAWQE---KFFQKEQALST------------------------LQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEK 1379
Cdd:pfam12128 542 KEAPDWEQsigKVISPELLHRTdldpevwdgsvggelnlygvkldlKRIDVPEWAASEEELRERLDKAEEALQSAREKQA 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1380 RHREELEQSKQAAGGLRAELLRAQRELG----ELIPLR-QKVAEQERTAQQLRAEKASYAE-------QLSMLKKAHGLL 1447
Cdd:pfam12128 622 AAEEQLVQANGELEKASREETFARTALKnarlDLRRLFdEKQSEKDKKNKALAERKDSANErlnsleaQLKQLDKKHQAW 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1448 AEENRG----LGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQST--------------ARELEVMT 1509
Cdd:pfam12128 702 LEEQKEqkreARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDlaslgvdpdviaklKREIRTLE 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1510 AKYEGAKV---KVLE-----------ERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLkavQAQGGESQQEAQRL 1575
Cdd:pfam12128 782 RKIERIAVrrqEVLRyfdwyqetwlqRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKL---EMERKASEKQQVRL 858
|
650 660
....*....|....*....|
gi 1622865026 1576 QARLNELQAQLSQKEQAAEH 1595
Cdd:pfam12128 859 SENLRGLRCEMSKLATLKED 878
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
603-708 |
1.26e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 43.56 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 603 LQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVEtacreqHEAQAQVAELEFQLQS 682
Cdd:TIGR04320 256 LAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATAQKELANAQAQAL------QTAQNNLATAQAALAN 329
|
90 100
....*....|....*....|....*..
gi 1622865026 683 -EQQKATEKERVAQEKDQLQEQLQALK 708
Cdd:TIGR04320 330 aEARLAKAKEALANLNADLAKKQAALD 356
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
700-1178 |
1.26e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 700 LQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQ 779
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 780 AetEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGI 859
Cdd:COG4717 127 L--LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 860 EShselQISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAAtskeVARLETLVRKAGEQQETASRELVK 939
Cdd:COG4717 205 QQ----RLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLL----LIAAALLALLGLGGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 940 EPARAGDREPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLtqergrAQAD 1019
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRI------EELQ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1020 LALEKAAKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKK-- 1097
Cdd:COG4717 351 ELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEel 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1098 EKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADslERSLEAERASRAERDSALETLQGQLEEKARE 1177
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQE--LEELKAELRELAEEWAALKLALELLEEAREE 508
|
.
gi 1622865026 1178 L 1178
Cdd:COG4717 509 Y 509
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
510-947 |
1.31e-03 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 43.80 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 510 LNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAA 589
Cdd:COG4995 2 LALALLALLAALLAALALALLALALLLLLAALAAAALLLLALLALLLALAAAAAAALAAAALALALLAAAALALLLLALA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 590 EEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEA 669
Cdd:COG4995 82 LAALALALLAAALALALAAAALAALALLAALLALAAAAALLALLAALALLALLAALAAALAAAAAAALAAALAAAAAAAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 670 QAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG4995 162 AAALLALALALAAAALALLALLLAALAAALAAAAAALALLLALLLLAALAAALAAALAALLLALLALAAALLALLLLALL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 750 HKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGA 829
Cdd:COG4995 242 ALAAAAAALAAAAAALLALAAALLLLAALAALAAAAAAAALAALALAAALALAAAALALALLLAAAAAAALAALALLLLA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 830 MFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQN-----ELVELHANLARALQQVQEKEVRAQKLADDLST 904
Cdd:COG4995 322 ALLLLLAALALLALLLLLAAAALLAAALAAALALAAALALALLaalllLLAALLALLLEALLLLLLALLAALLLLAAALL 401
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1622865026 905 LQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDR 947
Cdd:COG4995 402 ALAAAQLLRLLLAALALLLALAAYAAARLALLALIEYIILPDR 444
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
496-660 |
1.33e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.42 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 496 LTAQVASLTSELTTLNATIQQQDQELAdLKQQAKeeqaqlaqtlqqqeqasQGLRHQVEQLSSSLKQKEqqlkevAEKQE 575
Cdd:PRK09039 44 LSREISGKDSALDRLNSQIAELADLLS-LERQGN-----------------QDLQDSVANLRASLSAAE------AERSR 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 576 V-TRRDHAQQLATAAEEREASLrerDAALQQLEALEKEKAAKLEILQQQLQV-------------ANETRDSAQTSVTQA 641
Cdd:PRK09039 100 LqALLAELAGAGAAAEGRAGEL---AQELDSEKQVSARALAQVELLNQQIAAlrrqlaaleaaldASEKRDRESQAKIAD 176
|
170 180
....*....|....*....|..
gi 1622865026 642 --QREKAELSQKVEEL-RARVE 660
Cdd:PRK09039 177 lgRRLNVALAQRVQELnRYRSE 198
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
224-711 |
1.40e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 224 ADERSNRDELELELaenRKLLTEKDAQIAMMQQRIDRLAllnekqaasplepRELEELRDkNESLTMRLHETLKQCQDLK 303
Cdd:PRK04863 278 ANERRVHLEEALEL---RRELYTSRRQLAAEQYRLVEMA-------------RELAELNE-AESDLEQDYQAASDHLNLV 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 304 TEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLeKELSTALqdkkcleeknEIL 383
Cdd:PRK04863 341 QTALRQQEKIERYQADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQL-ADYQQAL----------DVQ 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 384 QGKLSQLEEHLALLREnppqEKGEVLGDVLQLETLKQEAATLAANNTQLQARVetLETEQGQQEAKllAERDHFEEEKQQ 463
Cdd:PRK04863 410 QTRAIQYQQAVQALER----AKQLCGLPDLTADNAEDWLEEFQAKEQEATEEL--LSLEQKLSVAQ--AAHSQFEQAYQL 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 464 LSSLIANLQSSISNlSQAKEELEQASqahgarltaqvasltsELTTLNATIQQQDQELADLKQQAKEEQAQlaqtlqqqe 543
Cdd:PRK04863 482 VRKIAGEVSRSEAW-DVARELLRRLR----------------EQRHLAEQLQQLRMRLSELEQRLRQQQRA--------- 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 544 qasQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREAsLRerdaalQQLEALeKEKAAKLEILQQQ 623
Cdd:PRK04863 536 ---ERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMA-LR------QQLEQL-QARIQRLAARAPA 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 624 LQVANE--TRDSAQTSVTQAQrekaelSQKVEELRARVETACREQHEAQAQVAELEFQLQSeqqkatEKERVAQEKDQLQ 701
Cdd:PRK04863 605 WLAAQDalARLREQSGEEFED------SQDVTEYMQQLLERERELTVERDELAARKQALDE------EIERLSQPGGSED 672
|
490
....*....|
gi 1622865026 702 EQLQALKESL 711
Cdd:PRK04863 673 PRLNALAERF 682
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1144-1331 |
1.53e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1144 DSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVAR-------- 1215
Cdd:COG4942 37 AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEllralyrl 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1216 GRQ-------------EAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSAR 1282
Cdd:COG4942 117 GRQpplalllspedflDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAE 196
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1622865026 1283 AAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKA 1331
Cdd:COG4942 197 RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
326-486 |
1.62e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 326 KLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLeKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLREnppqek 405
Cdd:COG1579 25 RLKELPAELAELEDELAALEARLEAAKTELEDLEKEI-KRLELEIEEVEARIKKYEEQLGNVRNNKEYEALQKE------ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 406 gevlgdvlqLETLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEEL 485
Cdd:COG1579 98 ---------IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREEL 168
|
.
gi 1622865026 486 E 486
Cdd:COG1579 169 A 169
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
866-988 |
1.66e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.03 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 866 QISRQQNELVELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETL-VRKAGEQQETASRELVKEPARA 944
Cdd:PRK09039 47 EISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALlAELAGAGAAAEGRAGELAQELD 126
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 945 --------GDREPEWLEEQQG---RQFCSTQAALQAMEREAEQMGNELE----RLRAAL 988
Cdd:PRK09039 127 sekqvsarALAQVELLNQQIAalrRQLAALEAALDASEKRDRESQAKIAdlgrRLNVAL 185
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1170-1346 |
1.71e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.50 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1170 QLEEKARELGHSQSALASVQ----RELAALRTKVQDHSKAED-EWKAQVARGRQEAERKNSLISSLE-EEVSILNRQvle 1243
Cdd:PRK10929 127 QEQDRAREISDSLSQLPQQQtearRQLNEIERRLQTLGTPNTpLAQAQLTALQAESAALKALVDELElAQLSANNRQ--- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1244 kegeskELKRLvmaESEKSQKLEDRLRLLQAETASN--------SARAAERSSALREEVQSLREEAEKQRVASENLRQEL 1315
Cdd:PRK10929 204 ------ELARL---RSELAKKRSQQLDAYLQALRNQlnsqrqreAERALESTELLAEQSGDLPKSIVAQFKINRELSQAL 274
|
170 180 190
....*....|....*....|....*....|.
gi 1622865026 1316 TSQAERAEELGQELKAWQEKFFQKEQALSTL 1346
Cdd:PRK10929 275 NQQAQRMDLIASQQRQAASQTLQVRQALNTL 305
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
284-683 |
1.71e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.13 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 284 KNESLTMRLHETLKQCQDLKTEKSQmdrkISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEwlekQAQLE 363
Cdd:pfam19220 4 RNELLRVRLGEMADRLEDLRSLKAD----FSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRE----LAGLT 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 364 KELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQ 443
Cdd:pfam19220 76 RRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKAL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 444 GQQEAKLLAERDH---FEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQE 520
Cdd:pfam19220 156 QRAEGELATARERlalLEQENRRLQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLAAEQAERERAEAQLEEA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 521 LADLKqqakeeqaqlaqtlqqqeQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQevtrRDHAQQLATAAEEREASLRERD 600
Cdd:pfam19220 236 VEAHR------------------AERASLRMKLEALTARAAATEQLLAEARNQL----RDRDEAIRAAERRLKEASIERD 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 601 AALQQLEALEKEKAAKLEILQQQLQVANETRDSA----------QTSVTQAQREKAELSQKVEELRARVETacrEQHEAQ 670
Cdd:pfam19220 294 TLERRLAGLEADLERRTQQFQEMQRARAELEERAemltkalaakDAALERAEERIASLSDRIAELTKRFEV---ERAALE 370
|
410
....*....|...
gi 1622865026 671 AQVAELEFQLQSE 683
Cdd:pfam19220 371 QANRRLKEELQRE 383
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1144-1270 |
2.15e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.15 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1144 DSLERSLEAERAsraERDSALETLQGQLEEKARELghsQSALASVQRELAALRTKVQdhskAEDEWKAQVARGRQEAERK 1223
Cdd:COG0542 414 DELERRLEQLEI---EKEALKKEQDEASFERLAEL---RDELAELEEELEALKARWE----AEKELIEEIQELKEELEQR 483
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622865026 1224 NSLISSLEEEVSILNRQVLEKEGESKE------------------LKRLVMAESEKSQKLEDRLR 1270
Cdd:COG0542 484 YGKIPELEKELAELEEELAELAPLLREevteediaevvsrwtgipVGKLLEGEREKLLNLEEELH 548
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
572-741 |
2.23e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 42.87 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 572 EKQEVTRRDHAQQLATAAEEREASLRERDAALQQ-LEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQ 650
Cdd:PRK09510 68 QQQQKSAKRAEEQRKKKEQQQAEELQQKQAAEQErLKQLEKERLAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKA 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 651 KVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKvtKGSLEEEKRRAADALE 730
Cdd:PRK09510 148 KAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKK--KAAAEAKKKAAAEAKA 225
|
170
....*....|.
gi 1622865026 731 EQQRCISELKA 741
Cdd:PRK09510 226 AAAKAAAEAKA 236
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
553-748 |
2.26e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 43.07 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 553 VEQLSSSLKQKEQQLKEVAEKQEVTRRDhaqqlATAAEEREASLRERDAalQQLEALEKEKAAKLEILQQQLQVANETRD 632
Cdd:pfam05262 172 VDTDSISDKKVVEALREDNEKGVNFRRD-----MTDLKERESQEDAKRA--QQLKEELDKKQIDADKAQQKADFAQDNAD 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 633 SAQTSVTQAQREKAELSQKveelrARVETACREQHEAQAQVAELEfQLQSEQQKATEKERVAqeKDQLQEQL-QALKESL 711
Cdd:pfam05262 245 KQRDEVRQKQQEAKNLPKP-----ADTSSPKEDKQVAENQKREIE-KAQIEIKKNDEEALKA--KDHKAFDLkQESKASE 316
|
170 180 190
....*....|....*....|....*....|....*..
gi 1622865026 712 KVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVE 748
Cdd:pfam05262 317 KEAEDKELEAQKKREPVAEDLQKTKPQVEAQPTSLNE 353
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
518-657 |
2.28e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 42.34 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 518 DQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLkEVAEKQEVTRRDHAQQLATAAEEREASLR 597
Cdd:COG1566 77 DPTDLQAALAQAEAQLAAAEAQLARLEAELGAEAEIAAAEAQLAAAQAQL-DLAQRELERYQALYKKGAVSQQELDEARA 155
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 598 ERDAALQQLEALEkekaAKLEILQQQLQVANETRDS-AQTSVTQAQREKAELSQKVEELRA 657
Cdd:COG1566 156 ALDAAQAQLEAAQ----AQLAQAQAGLREEEELAAAqAQVAQAEAALAQAELNLARTTIRA 212
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
358-741 |
2.31e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 43.27 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 358 KQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENppqekgevlgdvlqLETLKQEAATLAANNTQLQARVE 437
Cdd:pfam10174 290 KIDQLKQELSKKESELLALQTKLETLTNQNSDCKQHIEVLKES--------------LTAKEQRAAILQTEVDALRLRLE 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 438 TLETEQGQQEAKLLaerdHFEEEKQQLSSLIAN--------------LQSSISNLS-QAKEELEQASQAHGARLTAQVAS 502
Cdd:pfam10174 356 EKESFLNKKTKQLQ----DLTEEKSTLAGEIRDlkdmldvkerkinvLQKKIENLQeQLRDKDKQLAGLKERVKSLQTDS 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 503 LTSE--LTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEkqevtrrd 580
Cdd:pfam10174 432 SNTDtaLTTLEEALSEKERIIERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKE-------- 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 581 HAQQLATAAEEREASLRERDAALQQlealEKEKAAKLEilqQQLQVANETRDSAQTsvtqaqreKAELSQKVEELRARVE 660
Cdd:pfam10174 504 HASSLASSGLKKDSKLKSLEIAVEQ----KKEECSKLE---NQLKKAHNAEEAVRT--------NPEINDRIRLLEQEVA 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 661 TACREQHEAQAQVAEL-EFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISEL 739
Cdd:pfam10174 569 RYKEESGKAQAEVERLlGILREVENEKNDKDKKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNL 648
|
..
gi 1622865026 740 KA 741
Cdd:pfam10174 649 AD 650
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1412-1594 |
2.56e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1412 LRQKVAEQERTAQQLRAEKASYAEQL-------SMLKKAHGLLAEENRGLGERANLGRqfLEVELDQAREKYvQELAAVR 1484
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELeeaeaalEEFRQKNGLVDLSEEAKLLLQQLSE--LESQLAEARAEL-AEAEARL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1485 ADAETRLAEVQREAQSTAR--ELEVMTAKYEGAKVKVLEERQRFQEEkqklTAQVEELRKKLADsdqaskVQQQKLKAVQ 1562
Cdd:COG3206 243 AALRAQLGSGPDALPELLQspVIQQLRAQLAELEAELAELSARYTPN----HPDVIALRAQIAA------LRAQLQQEAQ 312
|
170 180 190
....*....|....*....|....*....|..
gi 1622865026 1563 AQGGESQQEAQRLQARLNELQAQLSQKEQAAE 1594
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQLAQLEARLA 344
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
340-983 |
2.63e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.02 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 340 ALNELTEEHSRATQEWLEKQAQLEKELSTALQDKKCLEEKNE---ILQGKLSQLEEHLALLRENppqekgevlgdVLQLE 416
Cdd:PRK04863 280 ERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEaesDLEQDYQAASDHLNLVQTA-----------LRQQE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 417 TLKQEAATLAANNTQLQARVETLETEQGQQEAkLLAERDHFEEEKQQLSSLIANLQSSI-------SNLSQAKEELEQAS 489
Cdd:PRK04863 349 KIERYQADLEELEERLEEQNEVVEEADEQQEE-NEARAEAAEEEVDELKSQLADYQQALdvqqtraIQYQQAVQALERAK 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 490 QAHG-ARLTAqvASLTSELTTLNATIQQQDQELADLKQQ------AKE----------------EQAQLAQTLQQQEQAS 546
Cdd:PRK04863 428 QLCGlPDLTA--DNAEDWLEEFQAKEQEATEELLSLEQKlsvaqaAHSqfeqayqlvrkiagevSRSEAWDVARELLRRL 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 547 QGLRHQVEQLSsslkQKEQQLKEVaeKQEVTRRDHAQQLATAAEEReASLRERDAAlqQLEALEKEKAAKLEILQQQLQV 626
Cdd:PRK04863 506 REQRHLAEQLQ----QLRMRLSEL--EQRLRQQQRAERLLAEFCKR-LGKNLDDED--ELEQLQEELEARLESLSESVSE 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 627 ANETRDSAQTSVTQAQREKAELSQKVEELRA------RVETACREQHEAQAQVAELEFQLQSEQQKAT-EKERVAQEKDQ 699
Cdd:PRK04863 577 ARERRMALRQQLEQLQARIQRLAARAPAWLAaqdalaRLREQSGEEFEDSQDVTEYMQQLLERERELTvERDELAARKQA 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 700 LQEQ--------------LQALKESLK---VTKG----SLEE------------------EKRRAADALEEQQRC----- 735
Cdd:PRK04863 657 LDEEierlsqpggsedprLNALAERFGgvlLSEIyddvSLEDapyfsalygparhaivvpDLSDAAEQLAGLEDCpedly 736
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 736 ---------------------------------------------------ISELKAETRSLVEQHKQEQKELEEEKAGR 764
Cdd:PRK04863 737 liegdpdsfddsvfsveelekavvvkiadrqwrysrfpevplfgraarekrIEQLRAEREELAERYATLSFDVQKLQRLH 816
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 765 KGLEARL-QQLGEAHQAETEA----LRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEqlmTLK 839
Cdd:PRK04863 817 QAFSRFIgSHLAVAFEADPEAelrqLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADE---TLA 893
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 840 EECEKARQELQEAKEKVAGIESHSEL--QISRQQNEL---VELHANLARALQQVQEKEVRAQKLADDLSTL--------- 905
Cdd:PRK04863 894 DRVEEIREQLDEAEEAKRFVQQHGNAlaQLEPIVSVLqsdPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVvqrrahfsy 973
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 906 ---QEKMAATSKEVARLETLVRKAgEQQETASRELVKEparagdrepewlEEQQGRQFCSTQAALQAMEREAEQMGNELE 982
Cdd:PRK04863 974 edaAEMLAKNSDLNEKLRQRLEQA-EQERTRAREQLRQ------------AQAQLAQYNQVLASLKSSYDAKRQMLQELK 1040
|
.
gi 1622865026 983 R 983
Cdd:PRK04863 1041 Q 1041
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1033-1594 |
2.76e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1033 RLQNALNEQRVEFATLQEALAH-----ALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQLKEQLAKKEKEHASGSGA 1107
Cdd:COG4913 259 ELAERYAAARERLAELEYLRAAlrlwfAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGD 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1108 QseaagrteptgpkLEALRAEVskleqqcqqqqeqaDSLERSLEAERASRAERDSALETLQGQLEEKARELGHSQSALAS 1187
Cdd:COG4913 339 R-------------LEQLEREI--------------ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1188 VQRELAALRTKVQDhskAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEkegeskelKRLVMAesEKSQKLED 1267
Cdd:COG4913 392 LLEALEEELEALEE---ALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA--------LRDALA--EALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1268 RLR----LLQAETASNSAR-AAERssALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQA 1342
Cdd:COG4913 459 ELPfvgeLIEVRPEEERWRgAIER--VLGGFALTLLVPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSL 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1343 LSTLQLEHTSTQALVSELL--PAKHLCqqlqAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELIPL----RQKV 1416
Cdd:COG4913 537 AGKLDFKPHPFRAWLEAELgrRFDYVC----VDSPEELRRHPRAITRAGQVKGNGTRHEKDDRRRIRSRYVLgfdnRAKL 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1417 AEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLgrQFLEVELDQAREKYV---QELAAVRAD------A 1487
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEY--SWDEIDVASAEREIAeleAELERLDASsddlaaL 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1488 ETRLAEVQREAQSTARELEVMTAKYEGAKvkvlEERQRFQEEKQKLTAQVEELrkkladSDQASKVQQQKLKAVQAQGGE 1567
Cdd:COG4913 691 EEQLEELEAELEELEEELDELKGEIGRLE----KELEQAEEELDELQDRLEAA------EDLARLELRALLEERFAAALG 760
|
570 580 590
....*....|....*....|....*....|
gi 1622865026 1568 SQQEAQ---RLQARLNELQAQLSQKEQAAE 1594
Cdd:COG4913 761 DAVERElreNLEERIDALRARLNRAEEELE 790
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
476-699 |
2.78e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 476 SNLSQAKEELEQAsQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqtlqqqeqasqgLRHQVEQ 555
Cdd:COG3883 16 PQIQAKQKELSEL-QAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDK------------------LQAEIAE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 556 LSSSLKQKEQQLKEVAEKQEVTRR------------------DHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKL 617
Cdd:COG3883 77 AEAEIEERREELGERARALYRSGGsvsyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 618 EILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEK 697
Cdd:COG3883 157 AELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
..
gi 1622865026 698 DQ 699
Cdd:COG3883 237 AA 238
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
971-1657 |
2.79e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.03 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 971 EREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFATLQE 1050
Cdd:TIGR00618 195 KAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1051 ALA-HALTEKEGKDQELVKLRGLEAAQIKELEELRQTMKQ-LKEQLAKKEKEHASGSGAQSEAAgRTEPTGPKLEALRAE 1128
Cdd:TIGR00618 275 QEAvLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTeLQSKMRSRAKLLMKRAAHVKQQS-SIEEQRRLLQTLHSQ 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1129 VSKLEQQCQQQQEQADSLERSLEAERASRAERDSaLETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDE 1208
Cdd:TIGR00618 354 EIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQ-KTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQ 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1209 WKAQVARGRQEAERKNSLISSLEEEVSILNR---QVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAE----TASNSA 1281
Cdd:TIGR00618 433 QELQQRYAELCAAAITCTAQCEKLEKIHLQEsaqSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplCGSCIH 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1282 RAAERSSALREEVQSLREEAEKQRVAS-----ENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQAL 1356
Cdd:TIGR00618 513 PNPARQDIDNPGPLTRRMQRGEQTYAQletseEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNI 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1357 VSELLPAKhlcqqlqaeqaaaekrhREELEQSKQAAGGLRAELLRAQRELGELiPLRQKVAEQERTAQQLRAEKASYAEQ 1436
Cdd:TIGR00618 593 TVRLQDLT-----------------EKLSEAEDMLACEQHALLRKLQPEQDLQ-DVRLHLQQCSQELALKLTALHALQLT 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1437 LSMLKKAHGLLAeeNRGLGERANLGRQFLEVELdQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAK 1516
Cdd:TIGR00618 655 LTQERVREHALS--IRVLPKELLASRQLALQKM-QSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLG 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1517 VKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHY 1596
Cdd:TIGR00618 732 SDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQE 811
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1597 KLQMEKAKTHYDAKkqQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQ 1657
Cdd:TIGR00618 812 IPSDEDILNLQCET--LVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
1555-1683 |
2.81e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 42.34 E-value: 2.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1555 QQKLKAVQAQGGESQQEAQRLQARLnELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKEL 1634
Cdd:COG1566 82 QAALAQAEAQLAAAEAQLARLEAEL-GAEAEIAAAEAQLAAAQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDAA 160
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1622865026 1635 RAEAERLGHELQQAGLKTKEAEQTcRHLTAQVRSLEAQVAHADQQLRDL 1683
Cdd:COG1566 161 QAQLEAAQAQLAQAQAGLREEEEL-AAAQAQVAQAEAALAQAELNLART 208
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
297-580 |
2.84e-03 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 42.26 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 297 KQCQDLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQEWLEKQAQLEKELSTAL----QD 372
Cdd:pfam09311 9 KQLQAIQEQEAETRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEETSNQVSTLAKRNQKSETLLDELQqafsQA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 373 KKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEvlgDVLQLETLKQEAATLAANNTQLQARVETLETEqgqqeakLLA 452
Cdd:pfam09311 89 KRNFQDQLAVLMDSREQVSDELVRLQKDNESLQGK---HSLHVSLQQAEKFDMPDTVQELQELVLKYREE-------LIE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 453 ERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELADLKQQAK--E 530
Cdd:pfam09311 159 VRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQLENGLTEKIRqlE 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1622865026 531 EQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRD 580
Cdd:pfam09311 239 DLQTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQRD 288
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1379-1594 |
2.85e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1379 KRHREELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLgera 1458
Cdd:PRK11281 76 DRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNSQL---- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1459 nlgrqfleVELDQAREKYVQELAAvradAETRLAEVQREAQSTArelevmtakyEGAKVKVLEERQRFQEEKQKLTAQVE 1538
Cdd:PRK11281 152 --------VSLQTQPERAQAALYA----NSQRLQQIRNLLKGGK----------VGGKALRPSQRVLLQAEQALLNAQND 209
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 1539 ELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKeQAAE 1594
Cdd:PRK11281 210 LQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQEAINSKRLTLSEK-TVQE 264
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1151-1361 |
2.91e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1151 EAERASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEdewkaQVARGRQEAERKNSLISSL 1230
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQ-----QLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1231 EEEVSILNRQVLEKEGESKELkrlvmAESEKSQKLEDRLRLLQAETASNSARAAERSS---ALREEVQSLR----EEAEK 1303
Cdd:COG3206 239 EARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSARYTPNHPdviALRAQIAALRaqlqQEAQR 313
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1622865026 1304 QRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELL 1361
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLL 371
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
508-860 |
2.94e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.57 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 508 TTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLAT 587
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 588 A---AEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACR 664
Cdd:pfam07888 110 SeelSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRS 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 665 EQHEAQ----------AQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQR 734
Cdd:pfam07888 190 LSKEFQelrnslaqrdTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDR 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 735 CISEL---KAETRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVA 811
Cdd:pfam07888 270 TQAELhqaRLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEVELG 349
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1622865026 812 AWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIE 860
Cdd:pfam07888 350 REKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLE 398
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
554-903 |
2.96e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.20 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 554 EQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAA---KLEILQQQLQVANET 630
Cdd:COG4372 2 DRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQleeELEQARSELEQLEEE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 631 RDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKES 710
Cdd:COG4372 82 LEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLES 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 711 LKVTKGSLEEEKRRAADALEEQQrcISELKAETRSLVEQHKQEQKELEEEKAGRKGLEARLQqlgeahQAETEALRQELA 790
Cdd:COG4372 162 LQEELAALEQELQALSEAEAEQA--LDELLKEANRNAEKEEELAEAEKLIESLPRELAEELL------EAKDSLEAKLGL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 791 EAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQ 870
Cdd:COG4372 234 ALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGAL 313
|
330 340 350
....*....|....*....|....*....|...
gi 1622865026 871 QNELVELHANLARALQQVQEKEVRAQKLADDLS 903
Cdd:COG4372 314 EDALLAALLELAKKLELALAILLAELADLLQLL 346
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
235-569 |
3.10e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 42.76 E-value: 3.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 235 LELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQ--------------AASPLEPRE-LEELRDKNESL--TMRLHETLK 297
Cdd:COG5022 803 LSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEevefslkaevliqkFGRSLKAKKrFSLLKKETIYLqsAQRVELAER 882
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 298 QCQDLKTEksqmDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHS---------RATQEWLEKQAQLEKELST 368
Cdd:COG5022 883 QLQELKID----VKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIarlkkllnnIDLEEGPSIEYVKLPELNK 958
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 369 ALQDKKCLEEKNEILQGKLSQLEEHlallrenppqeKGEVLGDVLQLETLKQEAATLAANNTQLQARVETLETEQG---- 444
Cdd:COG5022 959 LHEVESKLKETSEEYEDLLKKSTIL-----------VREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVevae 1027
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 445 -QQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQA--SQAHGARLTAQVASLTSELTTLNAT-IQQQDQE 520
Cdd:COG5022 1028 lQSASKIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRreNSLLDDKQLYQLESTENLLKTINVKdLEVTNRN 1107
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1622865026 521 LadLKQQAKEEQAQLAQTLQQQEQASQGLrhqVEQLSSSLKQKEQQLKE 569
Cdd:COG5022 1108 L--VKPANVLQFIVAQMIKLNLLQEISKF---LSQLVNTLEPVFQKLSV 1151
|
|
| COG5283 |
COG5283 |
Phage-related tail protein [Mobilome: prophages, transposons]; |
1575-1696 |
3.34e-03 |
|
Phage-related tail protein [Mobilome: prophages, transposons];
Pssm-ID: 444094 [Multi-domain] Cd Length: 747 Bit Score: 42.53 E-value: 3.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1575 LQARLNELQAQLSQKEQAAEHYKLQMEKAKThydAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKE 1654
Cdd:COG5283 5 LGAVDKPFKSALESAKQRVAALAQALKALEA---PTRALARALERAKQAAARLQTKYNKLRQSLQRLRQALDQAGIDTRQ 81
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1622865026 1655 AEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDALKSR 1696
Cdd:COG5283 82 LSAAQRRLRSSLEQTNRQLERQQQRLARLGARQDRLKAARAR 123
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
396-562 |
3.49e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 42.03 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 396 LLRENPPQEKGEVLgdvLQLE--TLKQEAATLAANNTQLQARVETLETEQGQQEAKLLAErdhfEEEKQQLSSLIANLQS 473
Cdd:pfam00529 35 LVKEGDRVKAGDVL---FQLDptDYQAALDSAEAQLAKAQAQVARLQAELDRLQALESEL----AISRQDYDGATAQLRA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 474 SISNLSQAKEELEQA-SQAHGARLTAQV------------ASLTSELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQ 540
Cdd:pfam00529 108 AQAAVKAAQAQLAQAqIDLARRRVLAPIggisreslvtagALVAQAQANLLATVAQLDQIYVQITQSAAENQAEVRSELS 187
|
170 180
....*....|....*....|..
gi 1622865026 541 QQEQASQGLRHQVEQLSSSLKQ 562
Cdd:pfam00529 188 GAQLQIAEAEAELKLAKLDLER 209
|
|
| PRK13729 |
PRK13729 |
conjugal transfer pilus assembly protein TraB; Provisional |
634-716 |
3.59e-03 |
|
conjugal transfer pilus assembly protein TraB; Provisional
Pssm-ID: 184281 [Multi-domain] Cd Length: 475 Bit Score: 42.12 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 634 AQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEfqlqseqqkatekervaQEKDQLQEQLQALKESLKV 713
Cdd:PRK13729 67 RQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLG-----------------QDNAALAEQVKALGANPVT 129
|
...
gi 1622865026 714 TKG 716
Cdd:PRK13729 130 ATG 132
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
552-745 |
3.61e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 552 QVEQLSSSLKQKEQQLKEVAEKQEVTrrdhAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETR 631
Cdd:COG3883 24 ELSELQAELEAAQAELDALQAELEEL----NEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 632 DSA--------QTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQ 703
Cdd:COG3883 100 GSVsyldvllgSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAE 179
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1622865026 704 LQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRS 745
Cdd:COG3883 180 QEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1078-1347 |
3.62e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 41.98 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1078 KELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEptgpKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASR 1157
Cdd:pfam19220 38 AILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTR----RLSAAEGELEELVARLAKLEAALREAEAAKEELRIEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1158 AERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSIL 1237
Cdd:pfam19220 114 RDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAEL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1238 NRQVLEKEGESK-ELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSA-----------------LREEVQSLRE 1299
Cdd:pfam19220 194 TRRLAELETQLDaTRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERASLrmklealtaraaateqlLAEARNQLRD 273
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1622865026 1300 EAEKQRVASENLRQ---ELTSQAERAEELGQELKAWQEKFFQKEQALSTLQ 1347
Cdd:pfam19220 274 RDEAIRAAERRLKEasiERDTLERRLAGLEADLERRTQQFQEMQRARAELE 324
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
282-531 |
3.90e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 282 RDKNESLTmRLHET-LKQCQDLKTEKSQMdrKISQLLEENGDLSF---KLREFASHLQQLQDALNELTEehsratQEWLE 357
Cdd:PRK05771 16 SYKDEVLE-ALHELgVVHIEDLKEELSNE--RLRKLRSLLTKLSEaldKLRSYLPKLNPLREEKKKVSV------KSLEE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 358 KQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLrenppqekgEVLGDV-------LQLETLKQEAATLAANNT 430
Cdd:PRK05771 87 LIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERL---------EPWGNFdldlsllLGFKYVSVFVGTVPEDKL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 431 QLQARVETLETEQGQQEAK------LLAERDHFEEekqqLSSLIANLQSS---ISNLSQAKEELEQASQahgarltaQVA 501
Cdd:PRK05771 158 EELKLESDVENVEYISTDKgyvyvvVVVLKELSDE----VEEELKKLGFErleLEEEGTPSELIREIKE--------ELE 225
|
250 260 270
....*....|....*....|....*....|
gi 1622865026 502 SLTSELTTLNATIQQQDQELADLKQQAKEE 531
Cdd:PRK05771 226 EIEKERESLLEELKELAKKYLEELLALYEY 255
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
304-408 |
4.16e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.38 E-value: 4.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 304 TEKSQMDRKISQLLEENGDLSfKLREFAS--HLQQLQDALNELTEEHSRATQEWLEkqaqlEKELSTALQD-KKCLEEKN 380
Cdd:COG0542 411 EELDELERRLEQLEIEKEALK-KEQDEASfeRLAELRDELAELEEELEALKARWEA-----EKELIEEIQElKEELEQRY 484
|
90 100
....*....|....*....|....*...
gi 1622865026 381 EILQGKLSQLEEHLALLRENPPQEKGEV 408
Cdd:COG0542 485 GKIPELEKELAELEEELAELAPLLREEV 512
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
688-1680 |
4.19e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 688 TEKERVAQEKDqlqEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETrslvEQHKQEQKELEEEKAGRKGL 767
Cdd:pfam01576 1 TRQEEEMQAKE---EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAET----ELCAEAEEMRARLAARKQEL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 768 EARLQQLGEAHQAETEALRQELAEAIAAQRTAESECEQLVKEVAAWRERYEESQQEEAQYGAMfQEQLMTLKEECEKARQ 847
Cdd:pfam01576 74 EEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKL-EEDILLLEDQNSKLSK 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 848 ELQEAKEKVAgieshselqisrqqnelvELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAG 927
Cdd:pfam01576 153 ERKLLEERIS------------------EFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLE 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 928 EQQETASRELVKEPARAgdrepEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAAlmeSQGQQQEERGQQEREVA 1007
Cdd:pfam01576 215 GESTDLQEQIAELQAQI-----AELRAQLAKKEEELQAALARLEEETAQKNNALKKIREL---EAQISELQEDLESERAA 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1008 RLTQERGRAQADLALEkAAKAELEMRLQ--NALNEQRVEFATLQEALAHAL-TEKEGKDQELVKLRGLEAAQIKELEELR 1084
Cdd:pfam01576 287 RNKAEKQRRDLGEELE-ALKTELEDTLDttAAQQELRSKREQEVTELKKALeEETRSHEAQLQEMRQKHTQALEELTEQL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1085 QTMKQLKEQLAKK----EKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQqcqqqqeqadsleRSLEAERAsRAER 1160
Cdd:pfam01576 366 EQAKRNKANLEKAkqalESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQA-------------RLSESERQ-RAEL 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1161 DSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQ----VARGRQEAERKNSLISSLEEEVSI 1236
Cdd:pfam01576 432 AEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQklnlSTRLRQLEDERNSLQEQLEEEEEA 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1237 ---LNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSA---LREEVQSLREEAEKQRVASEN 1310
Cdd:pfam01576 512 krnVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAydkLEKTKNRLQQELDDLLVDLDH 591
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1311 LRQELTSQAERAEELGQ---ELKAWQEKFF-QKEQALSTLQLEHTSTQALVSELLPAKHLcQQLQAEQAAAEKRHREELE 1386
Cdd:pfam01576 592 QRQLVSNLEKKQKKFDQmlaEEKAISARYAeERDRAEAEAREKETRALSLARALEEALEA-KEELERTNKQLRAEMEDLV 670
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1387 QSKQAAGGLRAELLRAQREL-GELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAH--GLLAEENRGLGERANLGRQ 1463
Cdd:pfam01576 671 SSKDDVGKNVHELERSKRALeQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFerDLQARDEQGEEKRRQLVKQ 750
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1464 F--LEVELDQAREKYVQELAAVRA-DAETRLAEVQREAQSTARELEVMTAKYEGAKVK----VLEERQRFQEE------- 1529
Cdd:pfam01576 751 VreLEAELEDERKQRAQAVAAKKKlELDLKELEAQIDAANKGREEAVKQLKKLQAQMKdlqrELEEARASRDEilaqske 830
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1530 ----KQKLTAQVEELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKT 1605
Cdd:pfam01576 831 sekkLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLND 910
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 1606 HYDAKKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQqagLKTKEAEQTCR-HLTAQVRSLEAQVAHADQQL 1680
Cdd:pfam01576 911 RLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELK---AKLQEMEGTVKsKFKSSIAALEAKIAQLEEQL 983
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1247-1654 |
4.24e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 4.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1247 ESKELKRLVMAESEksqkLEDRLRLLQAETASNSARAAERSSALREeVQSLREEAEKQRVASENLRQELTSQAERAEELG 1326
Cdd:PRK03918 177 RIERLEKFIKRTEN----IEELIKEKEKELEEVLREINEISSELPE-LREELEKLEKEVKELEELKEEIEELEKELESLE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1327 QELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKrHREELEQSKQAAGGLRAELLRAQREL 1406
Cdd:PRK03918 252 GSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEE-YLDELREIEKRLSRLEEEINGIEERI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1407 GELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQArEKYVQELAAVRAD 1486
Cdd:PRK03918 331 KELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEEL-EKAKEEIEEEISK 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1487 AETRLAEVQREAQstarELEVMTAKYEGAKVKV------LEERQRfQEEKQKLTAQVEELRKKLADSDQASKVQQQKLKA 1560
Cdd:PRK03918 410 ITARIGELKKEIK----ELKKAIEELKKAKGKCpvcgreLTEEHR-KELLEEYTAELKRIEKELKEIEEKERKLRKELRE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1561 VqaqggESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQ-MEKAKTHYDAKKQQNQELQEQLQSLEHLQKENKELRAEAE 1639
Cdd:PRK03918 485 L-----EKVLKKESELIKLKELAEQLKELEEKLKKYNLEeLEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA 559
|
410
....*....|....*
gi 1622865026 1640 RLGHELQQAGLKTKE 1654
Cdd:PRK03918 560 ELEKKLDELEEELAE 574
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1010-1233 |
4.32e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1010 TQERGRAQADLALEKAAKAELEMRLQNALNEQRV---EFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQT 1086
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKAllkQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1087 MKQLKEQLAKKEKEhASGSGAQSEAAGRTEPTGPKLEALRAEVskLEQQCQQQQEQADSLERSLEAERASRAERDSALET 1166
Cdd:COG4942 99 LEAQKEELAELLRA-LYRLGRQPPLALLLSPEDFLDAVRRLQY--LKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622865026 1167 LQGQLEEKARELGHSQSALASVQRELAALRtkvqdhsKAEDEWKAQVARGRQEAERKNSLISSLEEE 1233
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLE-------KELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
1429-1703 |
4.78e-03 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 42.13 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1429 EKASYAEQLSMLKKAhGLLAEENRGLGERANLGRQFLEVeldQAREKYVQELAAVRADAEtrlaevQREAQSTARelevm 1508
Cdd:NF012221 1497 ASAWQQKTLKLTAKA-GSNRLEFKGTGHNDGLGYILDNV---VATSESSQQADAVSKHAK------QDDAAQNAL----- 1561
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1509 takyeGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQASKVQ--QQKLKAVQAQGGESQQEAQRLQARLNELQAQL 1586
Cdd:NF012221 1562 -----ADKERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETngQAQRDAILEESRAVTKELTTLAQGLDALDSQA 1636
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1587 SQKEQAAEHYKLQ-----MEKAKTHYD-AKKQQNQELQEQLQSLE--HLQKENKELRAEA-----ERLGHELQQAGLKTK 1653
Cdd:NF012221 1637 TYAGESGDQWRNPfagglLDRVQEQLDdAKKISGKQLADAKQRHVdnQQKVKDAVAKSEAgvaqgEQNQANAEQDIDDAK 1716
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1622865026 1654 -EAEQtcRHLTAQVRSLEAQVAHAD-----QQLRDLGKFQVATDALKSREPQAKPQ 1703
Cdd:NF012221 1717 aDAEK--RKDDALAKQNEAQQAESDanaaaNDAQSRGEQDASAAENKANQAQADAK 1770
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1471-1679 |
5.04e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1471 QAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLTAQVEELRKKLADSDQA 1550
Cdd:COG4942 37 AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1551 SKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLQSLEHLQKE 1630
Cdd:COG4942 117 GRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAE 196
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1622865026 1631 NKELRAEAERLGHELQQAGLKTKEAEQTcrhLTAQVRSLEAQVAHADQQ 1679
Cdd:COG4942 197 RQKLLARLEKELAELAAELAELQQEAEE---LEALIARLEAEAAAAAER 242
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
563-655 |
5.10e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 42.25 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 563 KEQQLKEVAEKQEVTR-RDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQA 641
Cdd:PRK11448 138 EDPENLLHALQQEVLTlKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAETSQERKQK 217
|
90
....*....|....
gi 1622865026 642 QREKAELSQKVEEL 655
Cdd:PRK11448 218 RKEITDQAAKRLEL 231
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1515-1705 |
5.11e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1515 AKVKVLEERQRFQEEKQKLTAQVEELRkkLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAE 1594
Cdd:COG4913 249 EQIELLEPIRELAERYAAARERLAELE--YLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELD 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1595 HYKLQMEKAKThydakkqqnqelqeqlQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVA 1674
Cdd:COG4913 327 ELEAQIRGNGG----------------DRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAA 390
|
170 180 190
....*....|....*....|....*....|..
gi 1622865026 1675 HADQQLRD-LGKFQVATDALKSREPQAKPQLD 1705
Cdd:COG4913 391 ALLEALEEeLEALEEALAEAEAALRDLRRELR 422
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
914-1334 |
5.54e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 5.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 914 KEVARLETLVRKAGEQQETASRELVKEPARAGDREPEWLEEQQGRQfcSTQAALQAMEREAEQMGNELERLRAALmeSQG 993
Cdd:COG4717 53 KEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELE--ELEEELEELEAELEELREELEKLEKLL--QLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 994 QQQEERGQQEREVARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLE 1073
Cdd:COG4717 129 PLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1074 AAQIKELEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGpkLEALRAEVSKLEQQCQQQQEQADSLERSLEAE 1153
Cdd:COG4717 209 AELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLI--AAALLALLGLGGSLLSLILTIAGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1154 RASRAERDSALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEE 1233
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1234 VSILNRQVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQ 1313
Cdd:COG4717 367 ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEE 446
|
410 420
....*....|....*....|.
gi 1622865026 1314 ELTSQAERAEELGQELKAWQE 1334
Cdd:COG4717 447 ELEELREELAELEAELEQLEE 467
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
583-741 |
5.60e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 41.62 E-value: 5.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 583 QQLATAAEEREASLReRDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETA 662
Cdd:PRK12705 29 QRLAKEAERILQEAQ-KEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDARAEKLDNLENQL 107
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1622865026 663 CREQHEAQAQVAELEfqlQSEQQKATEKERVAQekdqlQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKA 741
Cdd:PRK12705 108 EEREKALSARELELE---ELEKQLDNELYRVAG-----LTPEQARKLLLKLLDAELEEEKAQRVKKIEEEADLEAERKA 178
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
1007-1525 |
5.75e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 41.77 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1007 ARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELVKLRGLEAAQIKELEELRQT 1086
Cdd:COG3899 732 LELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALAARALAALAALRHGNPPASARAYANLGLLLLGDYEEAYE 811
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1087 MKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEvskLEQQCQQQQEQADSLERSLEAERASRAERDSALET 1166
Cdd:COG3899 812 FGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELL---REALEAGLETGDAALALLALAAAAAAAAAAAALAA 888
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1167 LQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEG 1246
Cdd:COG3899 889 AAAAAARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAA 968
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1247 ESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELG 1326
Cdd:COG3899 969 AAALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAA 1048
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1327 QELkawqekffqkEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQREL 1406
Cdd:COG3899 1049 LAA----------AAAAAAAAAALAAAAALLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALAA 1118
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1407 GELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRAD 1486
Cdd:COG3899 1119 ALAALALAAAARAAAALLLLAAALALALAALLLLAALLLALALLLLALAALALAAALAALAAALLAAAAAAAAAAALLAA 1198
|
490 500 510
....*....|....*....|....*....|....*....
gi 1622865026 1487 AETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQR 1525
Cdd:COG3899 1199 LLALAARLAALLALALLALEAAALLLLLLLAALALAAAL 1237
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
337-697 |
6.14e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 6.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 337 LQDALNELTEEHSRATQEWLEKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEEHLALLRENPPQEKGEVLGDVLQLE 416
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 417 TLKQEAATLAANNTQLQARVETLE------TEQG-----------QQEAKLLAERDHFEEEKQQLSsliANLQSSISNLS 479
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEediktlTQRVleretelermkERAKKAGAQRKEEEAERKQLQ---AKLQQTEEELR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 480 QAKEELEQASQAHGARLTaQVASLTSELTTLNATIQQQDQELADLkQQAKEEQAQLAQTLQQQEQASQGLRhqvEQLSSS 559
Cdd:pfam07888 189 SLSKEFQELRNSLAQRDT-QVLQLQDTITTLTQKLTTAHRKEAEN-EALLEELRSLQERLNASERKVEGLG---EELSSM 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 560 LKQKEQQLKEV--AEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQvanetrDSAQTS 637
Cdd:pfam07888 264 AAQRDRTQAELhqARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLE------ERLQEE 337
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 638 VTQAQREKAELSQKVEELRARVETACREQHEAQA--QVAELEF-QLQSEQQKATEKERVAQEK 697
Cdd:pfam07888 338 RMEREKLEVELGREKDCNRVQLSESRRELQELKAslRVAQKEKeQLQAEKQELLEYIRQLEQR 400
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
215-399 |
6.40e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 6.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRL----ALLNEKQAASPLEPRELE-ELRDKNESLt 289
Cdd:TIGR04523 469 QLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLtkkiSSLKEKIEKLESEKKEKEsKISDLEDEL- 547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 290 MRLHETLKQCQdLKTEKSQMDRKISQLLEENGDLSFKLREFASHLQQLQDALNELTEEHSRATQewleKQAQLEKELSTA 369
Cdd:TIGR04523 548 NKDDFELKKEN-LEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEK----KISSLEKELEKA 622
|
170 180 190
....*....|....*....|....*....|
gi 1622865026 370 LQDKKCLEEKNEILQGKLSQLEEHLALLRE 399
Cdd:TIGR04523 623 KKENEKLSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1470-1728 |
6.58e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.56 E-value: 6.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1470 DQAREKYVQELAAVRADAETRLAEVQRE----------AQSTARELEVMTAKYEGAkvkvLEERQRFQEEKQKLTAQV-- 1537
Cdd:PRK02224 194 AQIEEKEEKDLHERLNGLESELAELDEEieryeeqreqARETRDEADEVLEEHEER----REELETLEAEIEDLRETIae 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1538 -----EELRKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAkkq 1612
Cdd:PRK02224 270 tererEELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAES--- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1613 qnqelqeQLQSLEHLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDA 1692
Cdd:PRK02224 347 -------LREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELRE 419
|
250 260 270
....*....|....*....|....*....|....*.
gi 1622865026 1693 LKSREPQAKPQLDLSIDSLDLSCEEGTPLSITSKLP 1728
Cdd:PRK02224 420 ERDELREREAELEATLRTARERVEEAEALLEAGKCP 455
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
582-749 |
6.63e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 6.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 582 AQQLATAAEEREASLRErdAALQQLEALEKEK--AAKLEILQQQLQVANETRDSAQtsvtQAQREKAELSQKVEELRARV 659
Cdd:PRK12704 29 AEAKIKEAEEEAKRILE--EAKKEAEAIKKEAllEAKEEIHKLRNEFEKELRERRN----ELQKLEKRLLQKEENLDRKL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 660 ETACREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALkeslkvtkgSLEEEKRRAADALEEqqrcisEL 739
Cdd:PRK12704 103 ELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGL---------TAEEAKEILLEKVEE------EA 167
|
170
....*....|
gi 1622865026 740 KAETRSLVEQ 749
Cdd:PRK12704 168 RHEAAVLIKE 177
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
423-785 |
6.68e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 6.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 423 ATLAANNTQLQARVETLETEQGQQEAKLLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQAsQAHGARLTAQVAS 502
Cdd:COG4372 27 AALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAA-QAELAQAQEELES 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 503 LTSELTTLNATIQQQDQELADLKQQAKEeqaqlaqtlqqqeqasqgLRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHA 582
Cdd:COG4372 106 LQEEAEELQEELEELQKERQDLEQQRKQ------------------LEAQIAELQSEIAEREEELKELEEQLESLQEELA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 583 QQLATAAEEREASLRERDAALQQLEALEKEKAAKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETA 662
Cdd:COG4372 168 ALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEED 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 663 CREQHEAQAQVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAE 742
Cdd:COG4372 248 KEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKK 327
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1622865026 743 TRSLVEQHKQEQKELEEEKAGRKGLEARLQQLGEAHQAETEAL 785
Cdd:COG4372 328 LELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
220-734 |
6.87e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 6.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 220 KKQLADERSNRDELElelaENRKLLTEkdaQIAMMQQRIDRLALLNEKQAASPLEPRELE---ELRDKNESLTMRLHETL 296
Cdd:PRK01156 151 RKKILDEILEINSLE----RNYDKLKD---VIDMLRAEISNIDYLEEKLKSSNLELENIKkqiADDEKSHSITLKEIERL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 297 KQCQDLKTEKSQMD----RKISQLLEENGDLSFKLREFASHLQQLQDALN---ELTEEHSRATQEWLEKQaqlEKELSTA 369
Cdd:PRK01156 224 SIEYNNAMDDYNNLksalNELSSLEDMKNRYESEIKTAESDLSMELEKNNyykELEERHMKIINDPVYKN---RNYINDY 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 370 LQDKKCLEEKNEILQGKLSQLEEHLALLR------------ENPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVE 437
Cdd:PRK01156 301 FKYKNDIENKKQILSNIDAEINKYHAIIKklsvlqkdyndyIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIE 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 438 TLETEQ-----------GQQEAK---LLAERDHFEEEKQQLSSLIANLQSSISNLSQAKEELEQASQAHGARLTAQVASL 503
Cdd:PRK01156 381 EYSKNIermsafiseilKIQEIDpdaIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGT 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 504 T--------------SELTTLNATIQQQDQELADLKQQAKEEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKE 569
Cdd:PRK01156 461 TlgeeksnhiinhynEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 570 VAEKQevtrrdhaqqlataaeereaslrerdaaLQQLEALEKEKAAKLEILQQQLQV---ANETRDSAQTSVTQAQREka 646
Cdd:PRK01156 541 LKDKH----------------------------DKYEEIKNRYKSLKLEDLDSKRTSwlnALAVISLIDIETNRSRSN-- 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 647 ELSQKVEELRARVETACREQHEAQA----QVAELEFQLQSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEK 722
Cdd:PRK01156 591 EIKKQLNDLESRLQEIEIGFPDDKSyidkSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLK 670
|
570
....*....|..
gi 1622865026 723 RRAADALEEQQR 734
Cdd:PRK01156 671 EITSRINDIEDN 682
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
561-662 |
6.98e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 6.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 561 KQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAAL----QQLEALEKEKAAKLEILQQQLQVANETRDSAQT 636
Cdd:PRK12704 63 KEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLekreEELEKKEKELEQKQQELEKKEEELEELIEEQLQ 142
|
90 100 110
....*....|....*....|....*....|.
gi 1622865026 637 ---SVTQAQRE--KAELSQKVEElRARVETA 662
Cdd:PRK12704 143 eleRISGLTAEeaKEILLEKVEE-EARHEAA 172
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
251-494 |
7.11e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 251 IAMMQQRIDRLALLNEK--QAASPLEP--RELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKISQLLEENGDLSFK 326
Cdd:PLN02939 134 VGMIQNAEKNILLLNQArlQALEDLEKilTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIR 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 327 LREFASHLQQLQDALNELTEEH------SRATQEWLEKQAQLEKELSTALQDKKCLEEKNEILQGKLSQLEE---HLALL 397
Cdd:PLN02939 214 GATEGLCVHSLSKELDVLKEENmllkddIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEdvsKLSPL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 398 RENPPQEKGEVLGDVLQLETLKQE-AATLAANNTQLQARVETLETEQG---------------QQEAKLLAErdHFEEEK 461
Cdd:PLN02939 294 QYDCWWEKVENLQDLLDRATNQVEkAALVLDQNQDLRDKVDKLEASLKeanvskfssykvellQQKLKLLEE--RLQASD 371
|
250 260 270
....*....|....*....|....*....|....*..
gi 1622865026 462 QQLSSLIANLQSSIS----NLSQAKEELEQASQAHGA 494
Cdd:PLN02939 372 HEIHSYIQLYQESIKefqdTLSKLKEESKKRSLEHPA 408
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1163-1305 |
7.39e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 7.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1163 ALETLQGQLEEKARELGHSQSALASVQRELAALRTKVQDHSKAEDEWKAQVAR--GRQEAERKNSLISSLEEEVSILNRQ 1240
Cdd:COG1579 25 RLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeEQLGNVRNNKEYEALQKEIESLKRR 104
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622865026 1241 VLEKEGESKELKRLVMAESEKSQKLEDRLRLLQAETASNSARAAERSSALREEVQSLREEAEKQR 1305
Cdd:COG1579 105 ISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
607-741 |
8.14e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.38 E-value: 8.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 607 EALEKEKAaklEILQQQLQVANETRDSAQTSVTQAQREKAELSQKVEELRARVETACREQHEAQAQVAELEFQLQSEQQK 686
Cdd:COG2433 380 EALEELIE---KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSE 456
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1622865026 687 ATEKERVAQEkdqlqeqLQALKESLKVTKGSLEEEKRRaadaLEEQQRCISELKA 741
Cdd:COG2433 457 ERREIRKDRE-------ISRLDREIERLERELEEERER----IEELKRKLERLKE 500
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
1180-1276 |
8.24e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.48 E-value: 8.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1180 HSQSALASVQRELAALRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQ--VLEKEGESKELKRLvMA 1257
Cdd:PRK11448 139 DPENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQleQLQEKAAETSQERK-QK 217
|
90
....*....|....*....
gi 1622865026 1258 ESEKSQKLEDRLRLLQAET 1276
Cdd:PRK11448 218 RKEITDQAAKRLELSEEET 236
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1227-1330 |
8.46e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 8.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1227 ISSLEEEVSILNRQVLEKEGESKELKRLVMAES-EKSQKLEDRLRLLQAETASNSARaAERSSALREEVQSLREEAEKQR 1305
Cdd:COG0542 406 IDSKPEELDELERRLEQLEIEKEALKKEQDEASfERLAELRDELAELEEELEALKAR-WEAEKELIEEIQELKEELEQRY 484
|
90 100
....*....|....*....|....*
gi 1622865026 1306 VASENLRQELTSQAERAEELGQELK 1330
Cdd:COG0542 485 GKIPELEKELAELEEELAELAPLLR 509
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1397-1685 |
8.48e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 8.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1397 AELLRAQRELGELiplRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHG---LLAEEnrGLGERanlgRQFLEVELDQAR 1473
Cdd:COG3096 836 AELAALRQRRSEL---ERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPqanLLADE--TLADR----LEELREELDAAQ 906
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1474 E--KYVQELAAVRADAETRLAEVQREAQStarelevmtakYEGAKVKVLEERQRFQEEKQKLTA--QVEELRKKLADSDQ 1549
Cdd:COG3096 907 EaqAFIQQHGKALAQLEPLVAVLQSDPEQ-----------FEQLQADYLQAKEQQRRLKQQIFAlsEVVQRRPHFSYEDA 975
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1550 AskvqqqklkavqAQGGESQQEAQRLQARLNELQAQLSQKEQAAEHYKLQMEKA-------KTHYDAKKQQNQELQEQLQ 1622
Cdd:COG3096 976 V------------GLLGENSDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYnqvlaslKSSRDAKQQTLQELEQELE 1043
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622865026 1623 SLEHLQKENKELRAEAERlgHELQQAGLKTKeaeQTCRHLTAQVRSLEAQVAHADQQLRDLGK 1685
Cdd:COG3096 1044 ELGVQADAEAEERARIRR--DELHEELSQNR---SRRSQLEKQLTRCEAEMDSLQKRLRKAER 1101
|
|
| MAP65_ASE1 |
pfam03999 |
Microtubule associated protein (MAP65/ASE1 family); |
549-742 |
8.89e-03 |
|
Microtubule associated protein (MAP65/ASE1 family);
Pssm-ID: 427641 [Multi-domain] Cd Length: 477 Bit Score: 40.76 E-value: 8.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 549 LRHQVEQLSSSLKQKEQQLKEVAEKQEVTRRDHAQQLATAAEEREASLRERDAALQQLEALEKEKAAKLE----ILQQQL 624
Cdd:pfam03999 95 LDTQLEHLRKEKAPRLAEIKELLEQLQQLCEELGEEPLPLLIDPLPSLEELESFRKHLENLRNEKERRLEevneLKKQIK 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 625 QVANETRDSAQTSVTQAQREKAELSQKVEelRARVETACREQHEAQAQVAELEfqlqseqqkatekervaQEKDQLQEQL 704
Cdd:pfam03999 175 LLMEELDLVPGTDFEEDLLCESEDNFCLS--RENIDKLRKLIKQLEEQKAERE-----------------EKIDDLREKI 235
|
170 180 190
....*....|....*....|....*....|....*...
gi 1622865026 705 QALKESLKVtkgSLEEEKRRAADALEEQQRCISELKAE 742
Cdd:pfam03999 236 LELWNRLQV---PQEEQESFVRENNSLSQDTIDALREE 270
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1456-1648 |
8.92e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1456 ERANLGRQFLEVELDQAREKYVQ-ELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEEKQKLT 1534
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEEaEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLG 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1535 AQVEELRKKLADSDQASKVQQ-----QKLKAVQAQGGESQQEAQRLQARLNELQAQLSQKEQAAehyklqMEKAKTHYDA 1609
Cdd:COG3206 251 SGPDALPELLQSPVIQQLRAQlaeleAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRI------LASLEAELEA 324
|
170 180 190
....*....|....*....|....*....|....*....
gi 1622865026 1610 KKQQNQELQEQLQSLEHLQKENKELRAEAERLGHELQQA 1648
Cdd:COG3206 325 LQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVA 363
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1080-1311 |
9.58e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.96 E-value: 9.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1080 LEELRQTMKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQQQQEQADSLERSLEAERASRAE 1159
Cdd:pfam10174 354 LEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSN 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 1160 RDSALETLQGQLEEKARELGHSQSALASVQRElaaLRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNR 1239
Cdd:pfam10174 434 TDTALTTLEEALSEKERIIERLKEQREREDRE---RLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLAS 510
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622865026 1240 QVLEKEGESKELKRLVMAESEKSQKLEDRLRLLQ--AETASNSARAAERSSALREEVQSLREEAEKQRVASENL 1311
Cdd:pfam10174 511 SGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHnaEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERL 584
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
615-945 |
9.61e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.10 E-value: 9.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 615 AKLEILQQQLQVANETRDSAQTSVTQAQREKAELSQKV---------EELRARVETACREQHEAQAQVAELEFQLQSEQQ 685
Cdd:PRK04863 786 KRIEQLRAEREELAERYATLSFDVQKLQRLHQAFSRFIgshlavafeADPEAELRQLNRRRVELERALADHESQEQQQRS 865
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 686 KAtekervaqekDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQqrcISELKaETRSLVEQHKQEQKEleeekagrk 765
Cdd:PRK04863 866 QL----------EQAKEGLSALNRLLPRLNLLADETLADRVEEIREQ---LDEAE-EAKRFVQQHGNALAQ--------- 922
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 766 gLEARLQQLgEAHQAETEALRQELAEAIAAQRTAESECEQLvKEVAAWRER--YEESQQ---EEAQYGAMFQEQLMTLKE 840
Cdd:PRK04863 923 -LEPIVSVL-QSDPEQFEQLKQDYQQAQQTQRDAKQQAFAL-TEVVQRRAHfsYEDAAEmlaKNSDLNEKLRQRLEQAEQ 999
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622865026 841 ECEKARQELQEAKEKVA-GIESHSELQISRQQNElvELHANLARALQQV-----QEKEVRAQ----KLADDLSTLQEKMA 910
Cdd:PRK04863 1000 ERTRAREQLRQAQAQLAqYNQVLASLKSSYDAKR--QMLQELKQELQDLgvpadSGAEERARarrdELHARLSANRSRRN 1077
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1622865026 911 ATSKEVARLE----TLVRKAGEQQE--TASRELVkEPARAG 945
Cdd:PRK04863 1078 QLEKQLTFCEaemdNLTKKLRKLERdyHEMREQV-VNAKAG 1117
|
|
| |
