|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
808-1483 |
4.73e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.87 E-value: 4.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 808 DKKVFELEKEIKCLQEEsvvqCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEE 887
Cdd:TIGR02168 273 RLEVSELEEEIEELQKE----LYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 888 VSQTCNKNEIHNEKEKcsiKEHENLKPLLEQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKE 967
Cdd:TIGR02168 349 LKEELESLEAELEELE---AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 968 KEEKINKIKLVAVKA-----KKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEK 1042
Cdd:TIGR02168 426 LLKKLEEAELKELQAeleelEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFS 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1043 ERANNFEHHVEDLTRQLrnsTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEK-------LQK 1115
Cdd:TIGR02168 506 EGVKALLKNQSGLSGIL---GVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRvtflpldSIK 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1116 EQKIK----EHATTVNELEELQVQLQKEKKQLQKTMQEL---ELVKKDAQQTTLMNMEIADYERLM-------------- 1174
Cdd:TIGR02168 583 GTEIQgndrEILKNIEGFLGVAKDLVKFDPKLRKALSYLlggVLVVDDLDNALELAKKLRPGYRIVtldgdlvrpggvit 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1175 ---KELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIK-------QLLVKTKKELADSKQAE 1244
Cdd:TIGR02168 663 ggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRkeleelsRQISALRKDLARLEAEV 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1245 TDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEH---LKTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATV 1321
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEieeLEAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1322 TSEFESYKVRVHNVLKQ----QKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSELQTLQSEHDTLLER 1397
Cdd:TIGR02168 823 RERLESLERRIAATERRledlEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEE 902
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1398 HNKMLQETVSKEAELREKlcsiqsenMMMKSEHTQTVSQLTSQNEVLRNSFRDQVRHLQEEHRKTVETLQQQLSRVEAQL 1477
Cdd:TIGR02168 903 LRELESKRSELRRELEEL--------REKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRL 974
|
....*.
gi 966982780 1478 FQLKNE 1483
Cdd:TIGR02168 975 KRLENK 980
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
433-1226 |
3.10e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.17 E-value: 3.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 433 KEQHQKEISELNETfLSDSEKEKLTLMFEIQGLKEQCDNLQQEKQEailnyesLREIMEILQTELGESAGKISqEFESMK 512
Cdd:TIGR02168 234 LEELREELEELQEE-LKEAEEELEELTAELQELEEKLEELRLEVSE-------LEEEIEELQKELYALANEIS-RLEQQK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 513 QQQASDVHELQQKLRTAFTEKDALLETVNHLQgenEKLLSQQELVPELENTIKNLEEKngvyllsLSQRDTMLKELEAKI 592
Cdd:TIGR02168 305 QILRERLANLERQLEELEAQLEELESKLDELA---EELAELEEKLEELKEELESLEAE-------LEELEAELEELESRL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 593 NSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQK-----VNELTGGLEETLKEKDQNDQ 667
Cdd:TIGR02168 375 EELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKleeaeLKELQAELEELEEELEELQE 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 668 KLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKNDVI---------------LKEHItELEK 732
Cdd:TIGR02168 455 ELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKallknqsglsgilgvLSELI-SVDE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 733 KLQLMVEE--RDNLNKLL-ENEQVQKLFVktqlyGFLKDmgsevsedgEEKDVVNILQAVSESLAKINEEKCNLVFQCDK 809
Cdd:TIGR02168 534 GYEAAIEAalGGRLQAVVvENLNAAKKAI-----AFLKQ---------NELGRVTFLPLDSIKGTEIQGNDREILKNIEG 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 810 KVFELEKEIKCLQEES---------VVQCEELKSLLRDY----------------------------EQEKVLL--RKEL 850
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRkalsyllggVLVVDDLDNALELAkklrpgyrivtldgdlvrpggvitggsaKTNSSILerRREI 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 851 EEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEvsqtcnkneihnekekcsikehenLKPLLEQKESELRDTRAEL 930
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQ------------------------LRKELEELSRQISALRKDL 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 931 ILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVKAKKELDSSRKETQTVREELESLRSEKDQL 1010
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1011 SASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERAnnfEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLL 1090
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAATERRLEDLEEQIEEL---SEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1091 EVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQL-QKTMQELELVKKDAQQTTlmnMEIAD 1169
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLsEEYSLTLEEAEALENKIE---DDEEE 969
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1170 YERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKI 1226
Cdd:TIGR02168 970 ARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
451-1214 |
1.40e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.78 E-value: 1.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 451 SEKEKLTLMFEIQGLKEQCDNLQQEKQEAilnyeslREIMEILQTELGESAGKISqEFESMKQQQASDVHELQQKLRTAF 530
Cdd:TIGR02168 223 RELELALLVLRLEELREELEELQEELKEA-------EEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 531 TEKDALLETVNHLQGENEKLLSQQElvpELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKINSLTEEKDDFINKLKNSY 610
Cdd:TIGR02168 295 NEISRLEQQKQILRERLANLERQLE---ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 611 EEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLmvQMKVLSEDKEVLSAEV 690
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA--ELKELQAELEELEEEL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 691 KSLYEENNKLSSEKKQLSRDLEVflsqkndviLKEHITELEKKLQLMVEERDNLNKLLENEQ------VQKLFVKTQLYG 764
Cdd:TIGR02168 450 EELQEELERLEEALEELREELEE---------AEQALDAAERELAQLQARLDSLERLQENLEgfsegvKALLKNQSGLSG 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 765 FLKDMGSEVS-EDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQEESVVQCEELKSLLRDYEQEK 843
Cdd:TIGR02168 521 ILGVLSELISvDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 844 VLLRKELEEIQSEKEALQSDLL-------EMKNANEKTRLENQNLLIQVEEvSQTCNKNEIhnekekcSIKEHENLKPLL 916
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRKALSYLLggvlvvdDLDNALELAKKLRPGYRIVTLD-GDLVRPGGV-------ITGGSAKTNSSI 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 917 EQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKiklvavkAKKELDSSRKETQTV 996
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISA-------LRKDLARLEAEVEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 997 REELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEkerannfehhVEDLTRQLRNSTLQCEKINSDNEDL 1076
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQ----------IEQLKEELKALREALDELRAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1077 LARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKD 1156
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 966982780 1157 AQQttlMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQS 1214
Cdd:TIGR02168 896 LEE---LSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYS 950
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
70-751 |
3.41e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 3.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 70 TDDIIKALTERLDAILLEKAETEQQCLSLKKENIKMKQEVEDSVTKMEDAHKE---LEQSHINYVKEIENLKNELMAVRA 146
Cdd:TIGR02168 244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisrLEQQKQILRERLANLERQLEELEA 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 147 KYSEDKA---NLQKELEEAMNKQLELSEQLKFQNNSEDNVKKLQEEIEKIRPAFEEQILYLQKQLDattdEKKETVTQLQ 223
Cdd:TIGR02168 324 QLEELESkldELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVA----QLELQIASLN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 224 NIIEANSQHyqknINSLQEELLQLKAIHQEEVKELMcqiEASAKEHETEINKLNELKENLVKQCEASEKNIQEKYECELE 303
Cdd:TIGR02168 400 NEIERLEAR----LERLEDRRERLQQEIEELLKKLE---EAELKELQAELEELEEELEELQEELERLEEALEELREELEE 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 304 NLRKATSNANQDNQMCSLLFQENTFVEQV--VNEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEM----------- 370
Cdd:TIGR02168 473 AEQALDAAERELAQLQARLDSLERLQENLegFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAalggrlqavvv 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 371 -DAQHIKDEFFHEREDLEFKINELLL----AKEEQGCVIEKLKSE--LAGLNKQFCCTVEQHNKEVQSL----------- 432
Cdd:TIGR02168 553 eNLNAAKKAIAFLKQNELGRVTFLPLdsikGTEIQGNDREILKNIegFLGVAKDLVKFDPKLRKALSYLlggvlvvddld 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 433 KEQHQKEISELNETFLSDsEKEKLTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMK 512
Cdd:TIGR02168 633 NALELAKKLRPGYRIVTL-DGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELE 711
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 513 QQqasdVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQElvpELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKI 592
Cdd:TIGR02168 712 EE----LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA---QLSKELTELEAEIEELEERLEEAEEELAEAEAEI 784
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 593 NSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKL 672
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 673 MVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKNDVI-----LKEHITELEKKLQLMVEERDNLNKL 747
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRreleeLREKLAQLELRLEGLEVRIDNLQER 944
|
....
gi 966982780 748 LENE 751
Cdd:TIGR02168 945 LSEE 948
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
99-951 |
1.49e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 1.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 99 KKENIKMKQEVEDSVTKMEDAHKELE-------------QSHINYVKEIENLKNELMAVRAKYSEDKANLQKELEEAMNK 165
Cdd:TIGR02168 174 RKETERKLERTRENLDRLEDILNELErqlkslerqaekaERYKELKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 166 QLElseqlkfqnNSEDNVKKLQEEIEKIRPAF---EEQILYLQKQLDATTDEKKETVTQLQnIIEANSQHYQKNINSLQE 242
Cdd:TIGR02168 254 ELE---------ELTAELQELEEKLEELRLEVselEEEIEELQKELYALANEISRLEQQKQ-ILRERLANLERQLEELEA 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 243 ELLQLKAiHQEEVKELMCQIEASAKEHETEINKLNELKENLVKQCEASEKNIQEKYEcELENLRKATSNANQDnqmcsll 322
Cdd:TIGR02168 324 QLEELES-KLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE-QLETLRSKVAQLELQ------- 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 323 fqentfvEQVVNEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIK-DEFFHEREDLEFKINELLLAKEEQG 401
Cdd:TIGR02168 395 -------IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELERLEEALEELR 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 402 CVIEKLKSELAGLNKQFCcTVEQHNKEVQSLKEQHQKEISELNETFLSDSEKEkltlmfEIQGLKEQCDNLQQEKQEAIL 481
Cdd:TIGR02168 468 EELEEAEQALDAAERELA-QLQARLDSLERLQENLEGFSEGVKALLKNQSGLS------GILGVLSELISVDEGYEAAIE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 482 NYeslreIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQELVPELE 561
Cdd:TIGR02168 541 AA-----LGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLR 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 562 NTIKNLeeKNGVYLL-SLSQRDTMLKELEAKINSLTEEkDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQY 640
Cdd:TIGR02168 616 KALSYL--LGGVLVVdDLDNALELAKKLRPGYRIVTLD-GDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEK 692
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 641 NSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKND 720
Cdd:TIGR02168 693 IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEE 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 721 -----VILKEHITELEKKLQLMVEERDNLNKLLENEQVQKLFVKTQLYGFLKDMGSEVSEDGEEKDVVNILQAVSESLAK 795
Cdd:TIGR02168 773 aeeelAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSE 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 796 INEEKCNLVFQCDKKVFELEKEIKCLQEESVVQCEELKSLLRDYEQekvlLRKELEEIQSEKEALQSDLLEMKNANEKTR 875
Cdd:TIGR02168 853 DIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE----LSEELRELESKRSELRRELEELREKLAQLE 928
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 876 LENQNLLIQVEevsqtcNKNEIHNEKEKCSIKEHENLKPLLEQKESELRDtraELILLKDSLAKSPSV------------ 943
Cdd:TIGR02168 929 LRLEGLEVRID------NLQERLSEEYSLTLEEAEALENKIEDDEEEARR---RLKRLENKIKELGPVnlaaieeyeelk 999
|
890
....*....|....*..
gi 966982780 944 ---------QNDLLSSV 951
Cdd:TIGR02168 1000 erydfltaqKEDLTEAK 1016
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1074-1394 |
3.15e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 3.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1074 EDLLARIETlqsNAKLLEVQILEVQRAKAMVDKELEAEK----LQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQE 1149
Cdd:TIGR02168 192 EDILNELER---QLKSLERQAEKAERYKELKAELRELELallvLRLEELREELEELQEELKEAEEELEELTAELQELEEK 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1150 LELVKKdaqqttlmnmEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQL 1229
Cdd:TIGR02168 269 LEELRL----------EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1230 LVKTKKELAdskQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKtSAEQHQRTLSAYRQRVTALQE 1309
Cdd:TIGR02168 339 LAELEEKLE---ELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL-QIASLNNEIERLEARLERLED 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1310 ESRAAKAEQATVTSEFESykvrvHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSELQTLQS 1389
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEE-----AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA 489
|
....*
gi 966982780 1390 EHDTL 1394
Cdd:TIGR02168 490 RLDSL 494
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
984-1239 |
5.45e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 64.32 E-value: 5.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 984 KELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERAnnfehhvedLTRQLRNST 1063
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR---------VKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1064 LQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQL 1143
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1144 QKTMQELELVKKDAQQTTL----MNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQY 1219
Cdd:TIGR02169 381 AETRDELKDYREKLEKLKReineLKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQL 460
|
250 260
....*....|....*....|
gi 966982780 1220 EEKNTKIKQLLVKTKKELAD 1239
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDR 480
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
589-1275 |
6.00e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 6.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 589 EAKINSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQK 668
Cdd:TIGR02168 224 ELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQ 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 669 LEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKNDviLKEHITELEKKLQLMVEERDNLNKLL 748
Cdd:TIGR02168 304 KQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELES--LEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 749 EN---EQVQKLFVKTQLYGFLKDMGSEVSEDGEEKDvvNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQEES 825
Cdd:TIGR02168 382 ETlrsKVAQLELQIASLNNEIERLEARLERLEDRRE--RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 826 VVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANE--KTRLENQNL----------LIQVEEVSQTC- 892
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEgvKALLKNQSGlsgilgvlseLISVDEGYEAAi 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 893 --------------NKNEI--------HNEKEKC------SIKEHENLKPLLEQKESELRDTRAELILLKDSLAKSPSVQ 944
Cdd:TIGR02168 540 eaalggrlqavvveNLNAAkkaiaflkQNELGRVtflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALS 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 945 N--------------------------------DLL--------------SSVKELEEKLENLEKEGKEKEEKINKiklv 978
Cdd:TIGR02168 620 YllggvlvvddldnalelakklrpgyrivtldgDLVrpggvitggsaktnSSILERRREIEELEEKIEELEEKIAE---- 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 979 avkAKKELDSSRKETQTVREELESLRSEKDQLSasmRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQ 1058
Cdd:TIGR02168 696 ---LEKALAELRKELEELEEELEQLRKELEELS---RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1059 LRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKamvdKELEAEKLQKEQKIKEHATTVNELEELQVQLQK 1138
Cdd:TIGR02168 770 LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL----TLLNEEAANLRERLESLERRIAATERRLEDLEE 845
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1139 EKKQLQKTMQELELVKKDAQ--------QTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKiqkqkqeTLQEEIT 1210
Cdd:TIGR02168 846 QIEELSEDIESLAAEIEELEelieelesELEALLNERASLEEALALLRSELEELSEELRELESKRS-------ELRRELE 918
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966982780 1211 SLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAETDHLI-LQASLKGELEASQQQVEVYKIQLAEI 1275
Cdd:TIGR02168 919 ELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEaLENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
115-712 |
8.36e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 8.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 115 KMEDAHKELEQSHINYVKEIENLKNELMAvRAKYSEDKANLQKELEEAMNKQLELSEQLKFQNNSEDNVKKLQEEIEKIR 194
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELK 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 195 PAFEEqilyLQKQLDATTDEKKEtvtqlqniIEANSQHYQKNINSLQEELLQLKaihqEEVKELmcqieASAKEHETEIN 274
Cdd:PRK03918 238 EEIEE----LEKELESLEGSKRK--------LEEKIRELEERIEELKKEIEELE----EKVKEL-----KELKEKAEEYI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 275 KLNELKENLVKQCEASEKNIqEKYECELENLRKATSNANQDNqmcsllfqentfveqvvnEKVKHLEDTLKELESQHSIL 354
Cdd:PRK03918 297 KLSEFYEEYLDELREIEKRL-SRLEEEINGIEERIKELEEKE------------------ERLEELKKKLKELEKRLEEL 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 355 KDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELAGLNKQfcctVEQHNKEVQSLK- 433
Cdd:PRK03918 358 EERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKE----IKELKKAIEELKk 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 434 -------------EQHQKEISELNETFLSDSEKEKLTLMFEIQGLKEQCDNLQQE--KQEAILNYESLREIMEILQTELG 498
Cdd:PRK03918 434 akgkcpvcgreltEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVlkKESELIKLKELAEQLKELEEKLK 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 499 EsagkisqefesmkqqqaSDVHELQQKLRtaftEKDALLETVNHLQGENEKLLSQQELVPELENTIKNLEEKNGVYLLSL 578
Cdd:PRK03918 514 K-----------------YNLEELEKKAE----EYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEEL 572
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 579 SQRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEEt 658
Cdd:PRK03918 573 AELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEE- 651
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 966982780 659 lKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLE 712
Cdd:PRK03918 652 -LEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELE 704
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
999-1280 |
3.12e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 3.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 999 ELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNfehHVEDLTRQLRNSTLQCEKINSDNEDLLA 1078
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEE---EIEELQKELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1079 RIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAq 1158
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKV- 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1159 qttlmnmeiadyerlmKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKntKIKQLLVKTKKELA 1238
Cdd:TIGR02168 389 ----------------AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELK--ELQAELEELEEELE 450
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 966982780 1239 DSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKH 1280
Cdd:TIGR02168 451 ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
831-1394 |
6.62e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.82 E-value: 6.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 831 ELKSLLRDYEQEKVLLRKELEEIQSEKEALQS---DLLEMKNANEKTRLENQNLLIQVEEVSQTcnKNEIHNEKEKCSiK 907
Cdd:PRK02224 203 DLHERLNGLESELAELDEEIERYEEQREQAREtrdEADEVLEEHEERREELETLEAEIEDLRET--IAETEREREELA-E 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 908 EHENLKPLLEQKESELRDTRAELILlKDSLAKSPSVQNDLLSSVKELeeklenlekegkekeekinkiklvavkAKKELD 987
Cdd:PRK02224 280 EVRDLRERLEELEEERDDLLAEAGL-DDADAEAVEARREELEDRDEE---------------------------LRDRLE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 988 SSRKETQTVREELESLRSEKDQLSASMRDLIQAAESyknLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLRNSTLQCE 1067
Cdd:PRK02224 332 ECRVAAQAHNEEAESLREDADDLEERAEELREEAAE---LESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLG 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1068 KINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQK-EQKIKE--HATTVNELEELQVQLQKEKKQLQ 1144
Cdd:PRK02224 409 NAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPEcGQPVEGspHVETIEEDRERVEELEAELEDLE 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1145 KTMQELElvKKDAQQTTLmnmeiADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNT 1224
Cdd:PRK02224 489 EEVEEVE--ERLERAEDL-----VEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAA 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1225 KIKQLLVKTKKELADSKQAetdhlilQASLKGELEASQQQVEVYKiQLAEITSEKHKIHEHLKTSAE---QHQRTLSAYR 1301
Cdd:PRK02224 562 EAEEEAEEAREEVAELNSK-------LAELKERIESLERIRTLLA-AIADAEDEIERLREKREALAElndERRERLAEKR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1302 QRVTALQEESRAAKAEQATVTSE-FESYKVRVHNVLKQQKNKSMS-QAETEGAKQEREHLEMLIDQLKiKLQDSQNNLQM 1379
Cdd:PRK02224 634 ERKRELEAEFDEARIEEAREDKErAEEYLEQVEEKLDELREERDDlQAEIGAVENELEELEELRERRE-ALENRVEALEA 712
|
570
....*....|....*
gi 966982780 1380 NVSELQTLQSEHDTL 1394
Cdd:PRK02224 713 LYDEAEELESMYGDL 727
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
619-1222 |
1.51e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.57 E-value: 1.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 619 KCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLmvqmkvlSEDKEVLSAEVKSLYEENN 698
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEEL-------RLELEELELELEEAQAEEY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 699 KLSSEKKQLSRDLEVFLSQKNDviLKEHITELEKKLQLMVEERDNLNKLLENEQVQKLFVKTQLygflkdMGSEVSEDGE 778
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRE--LEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL------EEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 779 EKDVVNILQAVSESLAKINEEKcNLVFQCDKKVFELEKEIKCLQEesvvQCEELKSLLRDYEQEKVLLRKELEEIQSEKE 858
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELA-EELLEALRAAAELAAQLEELEE----AEEALLERLERLEEELEELEEALAELEEEEE 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 859 ALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCNKNEIHNEKEKCSIKEHENLKPLLEQKEsELRDTRAELILLKDSLA 938
Cdd:COG1196 439 EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE-ADYEGFLEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 939 KSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLI 1018
Cdd:COG1196 518 GLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1019 QAAESYKNLLLEYEKQSEQL--------DVEKERANNFEHHVEDLTRQLRNSTLQCEKINSDNEDLL-ARIETLQSNAKL 1089
Cdd:COG1196 598 GAAVDLVASDLREADARYYVlgdtllgrTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGgSRRELLAALLEA 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1090 LEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIAD 1169
Cdd:COG1196 678 EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP 757
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1170 YERLMKELNQKLSNKNNKIEDLE----------QEIKIQKQ----KQETLQEEITSLQSSVQQYEEK 1222
Cdd:COG1196 758 EPPDLEELERELERLEREIEALGpvnllaieeyEELEERYDflseQREDLEEARETLEEAIEEIDRE 824
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
92-734 |
2.55e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.98 E-value: 2.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 92 EQQCLSLKKENIKMK---QEVEDSVTKMEDAHKELEQSHINYVKEIENLKNELMAVRAkysedkanLQKELEEAMNKQLE 168
Cdd:pfam15921 102 EKQKFYLRQSVIDLQtklQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKC--------LKEDMLEDSNTQIE 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 169 lseQLKFQNNSEDNVkklQEEIEKIRPAFEE---QILYLQKQLDATTDEKKET-VTQLQNIIEANSQHYQKNINSLQEEL 244
Cdd:pfam15921 174 ---QLRKMMLSHEGV---LQEIRSILVDFEEasgKKIYEHDSMSTMHFRSLGSaISKILRELDTEISYLKGRIFPVEDQL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 245 LQLKAIHQEEVKELMCQ----IEASAKEHETEINKLNELKENLVKQCEAseknIQEKYECELENLRKATSNanqdnQMCS 320
Cdd:pfam15921 248 EALKSESQNKIELLLQQhqdrIEQLISEHEVEITGLTEKASSARSQANS----IQSQLEIIQEQARNQNSM-----YMRQ 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 321 LLFQENTF--VEQVVNEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEFKINELLLAKE 398
Cdd:pfam15921 319 LSDLESTVsqLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKE 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 399 E----------QGCVIEKLKSELAGLN---KQFCCTVEQHNKEVQSLKEQHQKEISELNETFLSDSekeklTLMFEIQGL 465
Cdd:pfam15921 399 QnkrlwdrdtgNSITIDHLRRELDDRNmevQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-----SLTAQLEST 473
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 466 KEQCDNLQQEKQEAILNYESLREIMEILQTELGESAGKI---SQEFESMKQQQASDVHELQ----------------QKL 526
Cdd:pfam15921 474 KEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIeatNAEITKLRSRVDLKLQELQhlknegdhlrnvqtecEAL 553
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 527 RTAFTEKDALLETVNHLQGENEKLLSQ--------QELVPELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKINSL--- 595
Cdd:pfam15921 554 KLQMAEKDKVIEILRQQIENMTQLVGQhgrtagamQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLele 633
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 596 ------------------TEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQ--------YNSELEQKVN 649
Cdd:pfam15921 634 kvklvnagserlravkdiKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNklkmqlksAQSELEQTRN 713
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 650 ELTG-------------GLEETLKEK----DQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLE 712
Cdd:pfam15921 714 TLKSmegsdghamkvamGMQKQITAKrgqiDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE 793
|
730 740
....*....|....*....|..
gi 966982780 713 VFLSQKNDviLKEHITELEKKL 734
Cdd:pfam15921 794 VLRSQERR--LKEKVANMEVAL 813
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
822-1366 |
3.83e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 3.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 822 QEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEvsqtcnKNEIHNEK 901
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEE------AQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 902 EKCSIKEHENLKPLLEQKEsELRDTRAELILLKDSLAKSpsvQNDLLSSVKELEEKLENLEKEGKEkeekinkiklvavk 981
Cdd:COG1196 294 LAELARLEQDIARLEERRR-ELEERLEELEEELAELEEE---LEELEEELEELEEELEEAEEELEE-------------- 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 982 AKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERAnnfEHHVEDLTRQLRN 1061
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL---EEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1062 STLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKK 1141
Cdd:COG1196 433 LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1142 QLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEE 1221
Cdd:COG1196 513 ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1222 KNTKIKQ---LLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLS 1298
Cdd:COG1196 593 ARGAIGAavdLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966982780 1299 AYRQRVTALQEESRAAKAEQATVTSEFESYKVRVHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQL 1366
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEE 740
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
981-1221 |
4.69e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 4.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 981 KAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKqseqlDVEKERANNFEHHVEDLTRQLR 1060
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEA-----RLSHSRIPEIQAELSKLEEEVS 808
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1061 NSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKE---QKIKEHATTVNELEELQVQLQ 1137
Cdd:TIGR02169 809 RIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEeleEELEELEAALRDLESRLGDLK 888
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1138 KEKKQLQKTMQELELVKKDAqqttlmNMEIADYERLMKELNQKLSNKNNKIEDLEQEI--------------KIQKQKQE 1203
Cdd:TIGR02169 889 KERDELEAQLRELERKIEEL------EAQIEKKRKRLSELKAKLEALEEELSEIEDPKgedeeipeeelsleDVQAELQR 962
|
250 260
....*....|....*....|..
gi 966982780 1204 tLQEEITSLQS----SVQQYEE 1221
Cdd:TIGR02169 963 -VEEEIRALEPvnmlAIQEYEE 983
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
622-1317 |
5.70e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.77 E-value: 5.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 622 REERLILElgkKVEQTTQYNSELEQKVNELtgglEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLsaevkslyEENNKLS 701
Cdd:TIGR02169 153 VERRKIID---EIAGVAEFDRKKEKALEEL----EEVEENIERLDLIIDEKRQQLERLRREREKA--------ERYQALL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 702 SEKkqlsRDLEVFLSQKNDVILKEHITELEKKLQLMVEERDNLNKLLEnEQVQKLFVKTQLygfLKDMGSEVSEDGEEKD 781
Cdd:TIGR02169 218 KEK----REYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEIS-ELEKRLEEIEQL---LEELNKKIKDLGEEEQ 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 782 VvnilqAVSESLAKINEEkcnlVFQCDKKVFELEKEIKCLQEESVVQCEELKSLLRDYEQekvlLRKELEEIQSEKEALQ 861
Cdd:TIGR02169 290 L-----RVKEKIGELEAE----IASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEE----LEREIEEERKRRDKLT 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 862 SDLLEMKNANEKTRLENQNL----LIQVEEVSQTCNKNEIHNEKEKCSIKEHENLKPLLEQKESELRDTRAELILLKDSL 937
Cdd:TIGR02169 357 EEYAELKEELEDLRAELEEVdkefAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKI 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 938 AKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEK--INKIKLVAV-----KAKKELDSSRKETQTVREELESLRSEKDQL 1010
Cdd:TIGR02169 437 NELEEEKEDKALEIKKQEWKLEQLAADLSKYEQElyDLKEEYDRVekelsKLQRELAEAEAQARASEERVRGGRAVEEVL 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1011 SAS-------MRDLIQAAESYKNLL----------------------LEYEK---------------QSEQLDVEKERAN 1046
Cdd:TIGR02169 517 KASiqgvhgtVAQLGSVGERYATAIevaagnrlnnvvveddavakeaIELLKrrkagratflplnkmRDERRDLSILSED 596
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1047 ----------NFEHHVEDLTRQLRNSTLQCEKINSDNEDLL-ARIETL---------------------QSNAKLLEVQI 1094
Cdd:TIGR02169 597 gvigfavdlvEFDPKYEPAFKYVFGDTLVVEDIEAARRLMGkYRMVTLegelfeksgamtggsraprggILFSRSEPAEL 676
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1095 LEVQRAKAMVDKELEAekLQKEQKIKEhattvNELEELQVQLQKEKKQLQKTMQELELVKKDAQQttlMNMEIADYERLM 1174
Cdd:TIGR02169 677 QRLRERLEGLKRELSS--LQSELRRIE-----NRLDELSQELSDASRKIGEIEKEIEQLEQEEEK---LKERLEELEEDL 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1175 KELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSL-----QSSVQQYEEKNTKIKQLLVKTKKELADSKQAETDHLI 1249
Cdd:TIGR02169 747 SSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLearlsHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL 826
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966982780 1250 LQASLKGELEASQQQVEVYKIQLAEITSEKHKIH---EHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAE 1317
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNgkkEELEEELEELEAALRDLESRLGDLKKERDELEAQ 897
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1101-1472 |
1.43e-07 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 56.60 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1101 KAMVDKELEAEKLQKEQKIKEHATTVNELEELQVqlqkekkqLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQK 1180
Cdd:PRK10929 16 GAYAATAPDEKQITQELEQAKAAKTPAQAEIVEA--------LQSALNWLEERKGSLERAKQYQQVIDNFPKLSAELRQQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1181 LSNKNNKIEDLEQEIKIQKQKQETLQeeITSlqssvqqyeekntkikQLLvktkkELADSKQAETDHLILQASLKGELea 1260
Cdd:PRK10929 88 LNNERDEPRSVPPNMSTDALEQEILQ--VSS----------------QLL-----EKSRQAQQEQDRAREISDSLSQL-- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1261 SQQQVEVYKiQLAEITSeKHKIHEHLKTSAEQHQRtlsayrqrvTALQEESRAAKAeqatVTSEFESYKVRVHNvlKQQk 1340
Cdd:PRK10929 143 PQQQTEARR-QLNEIER-RLQTLGTPNTPLAQAQL---------TALQAESAALKA----LVDELELAQLSANN--RQE- 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1341 nksMSQAETEGAKQEREHLEMLIDQLKIKLqdsqNNLQMNVSElQTLqsEHDTLLERHNKMLQETVSKEAELREKLCSI- 1419
Cdd:PRK10929 205 ---LARLRSELAKKRSQQLDAYLQALRNQL----NSQRQREAE-RAL--ESTELLAEQSGDLPKSIVAQFKINRELSQAl 274
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 966982780 1420 --QSENM-MMKSEHTQTVSQLTSQNEVLrNSFRDQVRHLQEEhrkTV--ETLQQQLSR 1472
Cdd:PRK10929 275 nqQAQRMdLIASQQRQAASQTLQVRQAL-NTLREQSQWLGVS---NAlgEALRAQVAR 328
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
334-1128 |
3.04e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.44 E-value: 3.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 334 NEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEFK---------INEllLAKEEQGCVI 404
Cdd:TIGR01612 571 NEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLELKEKIKNISDKNEYIKKAIDLKkiiennnayIDE--LAKISPYQVP 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 405 EKLKSE-------LAGLNKQFCCTVEQHNKEVQSLKEQHQKEISElNETFLS------DSEKEKLTLMfEIQGLKEQCDN 471
Cdd:TIGR01612 649 EHLKNKdkiystiKSELSKIYEDDIDALYNELSSIVKENAIDNTE-DKAKLDdlkskiDKEYDKIQNM-ETATVELHLSN 726
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 472 LQQEKQEAIlnyESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQgenekll 551
Cdd:TIGR01612 727 IENKKNELL---DIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYN------- 796
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 552 SQQELVPELENTIKNLEEKNGVYLLSLSQRDtmlKELEAKINSLTEEKDDFINKLkNSYEEMDNFHK-KCEREERLILEL 630
Cdd:TIGR01612 797 DQINIDNIKDEDAKQNYDKSKEYIKTISIKE---DEIFKIINEMKFMKDDFLNKV-DKFINFENNCKeKIDSEHEQFAEL 872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 631 GKKV--EQTTQYNSELEQKVNELTGGLEET---LKEKDQNDQKLEKLMVQMKVLSEDKEvlsaEVKSLYEENNKLSSEKK 705
Cdd:TIGR01612 873 TNKIkaEISDDKLNDYEKKFNDSKSLINEInksIEEEYQNINTLKKVDEYIKICENTKE----SIEKFHNKQNILKEILN 948
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 706 Q------LSRDLEVFLSQKNDVILKEHITELEK---KLQLMVEERDN------LNKLLENEQVQKLFVKTQLYGFLKDMG 770
Cdd:TIGR01612 949 KnidtikESNLIEKSYKDKFDNTLIDKINELDKafkDASLNDYEAKNnelikyFNDLKANLGKNKENMLYHQFDEKEKAT 1028
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 771 SEVSEDGEE--KDVVNILQAVSESLAKINEEKCNLVfqcDKKVFELEKEIKCLQEESVVQCEELKSLLRDY------EQE 842
Cdd:TIGR01612 1029 NDIEQKIEDanKNIPNIEIAIHTSIYNIIDEIEKEI---GKNIELLNKEILEEAEINITNFNEIKEKLKHYnfddfgKEE 1105
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 843 KVLLRKELEEIQSEKEALQ-------SDLLEMKNANEKTRLENQNLLIQVEEVSQTCnkneIHNEKEKCSIKEHENLKPL 915
Cdd:TIGR01612 1106 NIKYADEINKIKDDIKNLDqkidhhiKALEEIKKKSENYIDEIKAQINDLEDVADKA----ISNDDPEEIEKKIENIVTK 1181
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 916 LEQKE------SELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLvavkakKELDSS 989
Cdd:TIGR01612 1182 IDKKKniydeiKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYI------EDLDEI 1255
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 990 RKETQtvreELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERA------NNFEHHVEDLTRQLRNST 1063
Cdd:TIGR01612 1256 KEKSP----EIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIREKSlkiiedFSEESDINDIKKELQKNL 1331
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966982780 1064 LQCEKINSDNEDLLARIETLQSnakllevqILEVQRAKAMVDKELEAEKlqkeqKIKEHATTVNE 1128
Cdd:TIGR01612 1332 LDAQKHNSDINLYLNEIANIYN--------ILKLNKIKKIIDEVKEYTK-----EIEENNKNIKD 1383
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
977-1232 |
4.37e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 4.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 977 LVAVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANnfeHHVEDLT 1056
Cdd:TIGR02169 667 LFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLK---ERLEELE 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1057 RQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVD-KELEAEKLQKEQKIKEHATTVNELEELQVQ 1135
Cdd:TIGR02169 744 EDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEARLREIEQKLNR 823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1136 LQKEKKQLQKTMQELELVKKDAQ-QTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQS 1214
Cdd:TIGR02169 824 LTLEKEYLEKEIQELQEQRIDLKeQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
250 260
....*....|....*....|..
gi 966982780 1215 SVQQ----YEEKNTKIKQLLVK 1232
Cdd:TIGR02169 904 KIEEleaqIEKKRKRLSELKAK 925
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1067-1332 |
1.60e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 52.71 E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1067 EKINSDNEDLLARIETLQSNAKLLEV---QILEV-------QRAKAMVDKELEAekLQKEQKIKEHATTVNELEELQVQL 1136
Cdd:COG3206 107 EDPLGEEASREAAIERLRKNLTVEPVkgsNVIEIsytspdpELAAAVANALAEA--YLEQNLELRREEARKALEFLEEQL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1137 QKEKKQLQKTMQELELVKKD------AQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEiT 1210
Cdd:COG3206 185 PELRKELEEAEAALEEFRQKnglvdlSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS-P 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1211 SLQSSVQQYEEKNTKIKQLL----------VKTKKELADSKQAetdhliLQASLKGELEASQQQVEVYKIQLAEITSEKH 1280
Cdd:COG3206 264 VIQQLRAQLAELEAELAELSarytpnhpdvIALRAQIAALRAQ------LQQEAQRILASLEAELEALQAREASLQAQLA 337
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 966982780 1281 KIHEHLKTSAEQhQRTLSAYRQRVTALQE--ESRAAKAEQATVTSEFESYKVRV 1332
Cdd:COG3206 338 QLEARLAELPEL-EAELRRLEREVEVARElyESLLQRLEEARLAEALTVGNVRV 390
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
922-1416 |
2.53e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 922 ELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVKAKKELDSSRKETQTVREELE 1001
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1002 SLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERAnnfEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIE 1081
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEA---EAELAEAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1082 TLQSNAKLLEVQILEVQRAKAmvdkELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELvkkdaqqtt 1161
Cdd:COG1196 390 EALRAAAELAAQLEELEEAEE----ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE--------- 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1162 lmnmEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTK------K 1235
Cdd:COG1196 457 ----EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAvavligV 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1236 ELADSKQAETDHLILQASLKGELEASQQQVEVY---------------KIQLAEITSEKHKIHEHLK----TSAEQHQRT 1296
Cdd:COG1196 533 EAAYEAALEAALAAALQNIVVEDDEVAAAAIEYlkaakagratflpldKIRARAALAAALARGAIGAavdlVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1297 LSAYRQRVTALQEESRAAKAEQATVTSEFESYKVRVhnVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNN 1376
Cdd:COG1196 613 ARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLRE--VTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAE 690
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 966982780 1377 LQMNVSELQTLQSEHDTLLERHNKMLQETVSKEAELREKL 1416
Cdd:COG1196 691 EELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQL 730
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
814-1458 |
5.05e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.51 E-value: 5.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 814 LEKEIKCLQEESVVQCEELKSL--LRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTR--------LENQNLLI 883
Cdd:TIGR00618 224 LEKELKHLREALQQTQQSHAYLtqKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINrarkaaplAAHIKAVT 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 884 QVEEVSQTCNKNEIHNEKEKCSIKEHENLKPLLEQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEK 963
Cdd:TIGR00618 304 QIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHT 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 964 EGKEKEEKINKIKLvavkAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKE 1043
Cdd:TIGR00618 384 LQQQKTTLTQKLQS----LCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKI 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1044 RANNFEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDkELEAEKLQKEQKIKEHA 1123
Cdd:TIGR00618 460 HLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDID-NPGPLTRRMQRGEQTYA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1124 TTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMN---MEIADYERLMKELNQKLSNKNNKIED----LEQEIK 1196
Cdd:TIGR00618 539 QLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDnrsKEDIPNLQNITVRLQDLTEKLSEAEDmlacEQHALL 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1197 IQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKE-----LADSKQAETDHLILQASLKGELEASQQQVEVYKIQ 1271
Cdd:TIGR00618 619 RKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQErvrehALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEM 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1272 LAEITSEKHKIHEHLKTSAEQhqrtlsayrqrvtaLQEESRAAKAEQATVTSEFESYKVRVHNVLKQQKNKSMSQAETEG 1351
Cdd:TIGR00618 699 LAQCQTLLRELETHIEEYDRE--------------FNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHF 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1352 AKQEREHLEMLID----QLKIKLQDSQNNLQMNVSELQTLQSEHDTLLERHNKMLQETVSKEAELREKLCSIQSENMMMK 1427
Cdd:TIGR00618 765 NNNEEVTAALQTGaelsHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATL 844
|
650 660 670
....*....|....*....|....*....|.
gi 966982780 1428 SEHTQTVSQLTSQNEVLRNSFRDQVRHLQEE 1458
Cdd:TIGR00618 845 GEITHQLLKYEECSKQLAQLTQEQAKIIQLS 875
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
851-1265 |
5.78e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.07 E-value: 5.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 851 EEIQSEKEALQSD-LLEMKNANEKTRLEN-QNLLIQVEEVSQtcnkneihnekekcsikEHENLKPLLEQKESELRDTRA 928
Cdd:PRK11281 39 ADVQAQLDALNKQkLLEAEDKLVQQDLEQtLALLDKIDRQKE-----------------ETEQLKQQLAQAPAKLRQAQA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 929 ELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAV------KAKKELDSSRKETQTVREELES 1002
Cdd:PRK11281 102 ELEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSlqtqpeRAQAALYANSQRLQQIRNLLKG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1003 LRSEKDQLSASMRDLIQAAESYKNLLLEYEKQS------------EQLDVEKERANNFEHHVEDL-----TRQLRNSTLQ 1065
Cdd:PRK11281 182 GKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSlegntqlqdllqKQRDYLTARIQRLEHQLQLLqeainSKRLTLSEKT 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1066 CEKinSDNEDLLARIET-------LQSNAKLLEVQILEVQRAKAMVDKELEAEK-----LQKEQKIKEhattvnELEELQ 1133
Cdd:PRK11281 262 VQE--AQSQDEAARIQAnplvaqeLEINLQLSQRLLKATEKLNTLTQQNLRVKNwldrlTQSERNIKE------QISVLK 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1134 VQLQKEKKqLQKTMQELelvkKDAQQTTLMNMEIADYeRLMK-ELNQ---KLSNKNNKIEDLEqeikiQKQKQETLQEEI 1209
Cdd:PRK11281 334 GSLLLSRI-LYQQQQAL----PSADLIEGLADRIADL-RLEQfEINQqrdALFQPDAYIDKLE-----AGHKSEVTDEVR 402
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 966982780 1210 TSLQSsvqqyeekntkikqlLVKTKKELAD--SKQaetdhLILQASLKGELEASQQQV 1265
Cdd:PRK11281 403 DALLQ---------------LLDERRELLDqlNKQ-----LNNQLNLAINLQLNQQQL 440
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
691-1506 |
6.76e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.89 E-value: 6.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 691 KSLYEENNKLSSEKKQLSRDLEvfLSQKNDVILKEHITELEKKLQLMVEERDNLNKLLENEqvqklfvktqlygflkdmg 770
Cdd:pfam15921 78 RVLEEYSHQVKDLQRRLNESNE--LHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRE------------------- 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 771 sevseDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIkcLQEESVVQceELKSLLRDYEQEK------- 843
Cdd:pfam15921 137 -----SQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMM--LSHEGVLQ--EIRSILVDFEEASgkkiyeh 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 844 ------------VLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNlliQVEEVSQTcnkneiHNEKEKCSIKEHEN 911
Cdd:pfam15921 208 dsmstmhfrslgSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQN---KIELLLQQ------HQDRIEQLISEHEV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 912 LKPLLEQKESELRdtraelillkdSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVKAKKELDSSRK 991
Cdd:pfam15921 279 EITGLTEKASSAR-----------SQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEEL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 992 ETQTV--REELESLRSEKDQLSASMRDLiqaAESYKNLLLEYEKQSEQLDVEKERANNFEHH-------VEDLTRQLRNS 1062
Cdd:pfam15921 348 EKQLVlaNSELTEARTERDQFSQESGNL---DDQLQKLLADLHKREKELSLEKEQNKRLWDRdtgnsitIDHLRRELDDR 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1063 TLQCEKINS-----------DNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDK---ELEAEKLQKEQKIKEHATTVNE 1128
Cdd:pfam15921 425 NMEVQRLEAllkamksecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKvveELTAKKMTLESSERTVSDLTAS 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1129 LEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEE 1208
Cdd:pfam15921 505 LQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRT 584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1209 ITSLQSSVQQYEeKNTKIKQLLVKTKKELADSKQAETDhlilqaslkgELEASQQQVEVYKIQLAEITSEKHKIHEHLKT 1288
Cdd:pfam15921 585 AGAMQVEKAQLE-KEINDRRLELQEFKILKDKKDAKIR----------ELEARVSDLELEKVKLVNAGSERLRAVKDIKQ 653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1289 SAEQHQRTLSAYRQRVTALQEES-------RAAKAEQATVTSEFESYKVRVHNVLKQQKN--KSMSQAETE------GAK 1353
Cdd:pfam15921 654 ERDQLLNEVKTSRNELNSLSEDYevlkrnfRNKSEEMETTTNKLKMQLKSAQSELEQTRNtlKSMEGSDGHamkvamGMQ 733
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1354 QEREHLEMLIDQLKIKLQ-------DSQNNLQMNVSELQTLQSEHDTLLERHNKM---LQETVSKEAELREKLCSIQS-- 1421
Cdd:pfam15921 734 KQITAKRGQIDALQSKIQfleeamtNANKEKHFLKEEKNKLSQELSTVATEKNKMageLEVLRSQERRLKEKVANMEVal 813
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1422 ENMMMKSEHTQTVSQLTSQNEV-LRNSFRDQVRHLQEEHRKTVETLQQQLSRVEAQLFQLKNEPTTRSMPSFLS------ 1494
Cdd:pfam15921 814 DKASLQFAECQDIIQRQEQESVrLKLQHTLDVKELQGPGYTSNSSMKPRLLQPASFTRTHSNVPSSQSTASFLShhsrkt 893
|
890
....*....|...
gi 966982780 1495 -TIFEEPSRKEKH 1506
Cdd:pfam15921 894 nALKEDPTRDLKQ 906
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1070-1292 |
7.69e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 7.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1070 NSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQE 1149
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1150 LELVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEI-KIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQ 1228
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLaPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966982780 1229 LLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQ 1292
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1178-1411 |
8.39e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 8.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1178 NQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAetdhlilQASLKGE 1257
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE-------LAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1258 LEASQQQVEVYKIQLAE--ITSEKHKIHEHLK-----TSAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTsefesykv 1330
Cdd:COG4942 92 IAELRAELEAQKEELAEllRALYRLGRQPPLAlllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA-------- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1331 RVHNVLKQQKNKsmSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSELQTLQSEHDTLLERHNKMLQETVSKEA 1410
Cdd:COG4942 164 ALRAELEAERAE--LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
.
gi 966982780 1411 E 1411
Cdd:COG4942 242 R 242
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
657-894 |
1.30e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.93 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 657 ETLKEKDQNDQ---KLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQkndvILKEhITELEKK 733
Cdd:PRK05771 34 EDLKEELSNERlrkLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEK----IEKE-IKELEEE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 734 LQLMVEERDNLNKLLE--------NEQVQKLFVKTQLYGFLkdmgSEVSEDGEEKDVVNILQAVSEsLAKINEEKCNLVF 805
Cdd:PRK05771 109 ISELENEIKELEQEIErlepwgnfDLDLSLLLGFKYVSVFV----GTVPEDKLEELKLESDVENVE-YISTDKGYVYVVV 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 806 QCDKKVF-ELEKEIKCL--QEESVVQCEELKSLLRDYEQEkvllrkeLEEIQSEKEALQSDLLEMKNANEKTRLENQNLL 882
Cdd:PRK05771 184 VVLKELSdEVEEELKKLgfERLELEEEGTPSELIREIKEE-------LEEIEKERESLLEELKELAKKYLEELLALYEYL 256
|
250
....*....|..
gi 966982780 883 IQVEEVSQTCNK 894
Cdd:PRK05771 257 EIELERAEALSK 268
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
74-357 |
1.36e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.94 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 74 IKALTERLDAILLEKAETEQQCLSLKKEnikmKQEVEDSVTKMEDAHKELEQSHINYVKEIENLKNELmavrAKYSEDKA 153
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAE----LAELEAELEELRLELEELELELEEAQAEEYELLAEL----ARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 154 NLQKELEEAMNKQLELSEQLKFQNNSEDNVKKLQEEIEKIRPAFEEQILYLQKQLDATTDEKKETVTQLQNIIEANSQHY 233
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 234 QKNINSLQEELLQLKAIHQEEVKELmcQIEASAKEHETEINKLNELKENLVKQCEASEKNIQEKYECELENLRKATSNAN 313
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEE--ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 966982780 314 QDnqmcsllfQENTFVEQVVNEKVKHLEDTLKELESQHSILKDE 357
Cdd:COG1196 464 LL--------AELLEEAALLEAALAELLEELAEAAARLLLLLEA 499
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1141-1370 |
1.37e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1141 KQLQKTMQELELVKKdaqqttlmnmEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYE 1220
Cdd:COG4942 20 DAAAEAEAELEQLQQ----------EIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1221 EKNTKIKQLLVKTKKELAD------------------SKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKhki 1282
Cdd:COG4942 90 KEIAELRAELEAQKEELAEllralyrlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR--- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1283 hEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTSEFESYKVRVHNVLKQQKN--KSMSQAETEGAKQEREHLE 1360
Cdd:COG4942 167 -AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEEleALIARLEAEAAAAAERTPA 245
|
250
....*....|
gi 966982780 1361 MLIDQLKIKL 1370
Cdd:COG4942 246 AGFAALKGKL 255
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1008-1239 |
1.57e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1008 DQLSASMRDLiqaaESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLT--RQLRnSTLQCEKINSDNEDLLARIETLQS 1085
Cdd:COG4913 228 DALVEHFDDL----ERAHEALEDAREQIELLEPIRELAERYAAARERLAelEYLR-AALRLWFAQRRLELLEAELEELRA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1086 NAKLLEVQILEVQRAKamvdKELEAEKLQKEQKIKEHATtvNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTL-MN 1164
Cdd:COG4913 303 ELARLEAELERLEARL----DALREELDELEAQIRGNGG--DRLEQLEREIERLERELEERERRRARLEALLAALGLpLP 376
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966982780 1165 MEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELAD 1239
Cdd:COG4913 377 ASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAE 451
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
986-1479 |
1.77e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.65 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 986 LDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLRNSTLQ 1065
Cdd:PRK02224 208 LNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRER 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1066 CEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQ---KEQKIKEHATTVNELEELQVQLQKEKKQ 1142
Cdd:PRK02224 288 LEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAaqaHNEEAESLREDADDLEERAEELREEAAE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1143 LQKTMQELELVKKDAQQttlmnmEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEK 1222
Cdd:PRK02224 368 LESELEEAREAVEDRRE------EIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARER 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1223 NTKIKQLLVKTK-----KELADSKQAET---------DHLILQASLKGELEASQQQVEVYKiQLAEITSEKHKIHEHLKT 1288
Cdd:PRK02224 442 VEEAEALLEAGKcpecgQPVEGSPHVETieedrerveELEAELEDLEEEVEEVEERLERAE-DLVEAEDRIERLEERRED 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1289 SAE---QHQRTLSAYRQRVTALQEES------------RAAKAEQAT-----VTSEFESYKVRVHNVLKQQKNKSMSQAE 1348
Cdd:PRK02224 521 LEEliaERRETIEEKRERAEELRERAaeleaeaeekreAAAEAEEEAeeareEVAELNSKLAELKERIESLERIRTLLAA 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1349 TEGAKQE-------REHLEMLIDQLKIKLQD-----SQNNLQMNVSELQTLQSEHdtllERHNKMLQETVSKEAELREKL 1416
Cdd:PRK02224 601 IADAEDEierlrekREALAELNDERRERLAEkrerkRELEAEFDEARIEEAREDK----ERAEEYLEQVEEKLDELREER 676
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 966982780 1417 CSIQSENMMMKSEHTQtvsqltsqnevlRNSFRDQVRHLQEEH------RKTVETLQQQLSRVEAQLFQ 1479
Cdd:PRK02224 677 DDLQAEIGAVENELEE------------LEELRERREALENRVealealYDEAEELESMYGDLRAELRQ 733
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
575-813 |
1.92e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 49.24 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 575 LLSLSQRDTMLKELEAKINSLTEEKDDFINKLknsyeemDNFHKKCEREERLILELGKKveqTTQYNSELEQKVNELtgg 654
Cdd:PHA02562 159 LLDISVLSEMDKLNKDKIRELNQQIQTLDMKI-------DHIQQQIKTYNKNIEEQRKK---NGENIARKQNKYDEL--- 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 655 leetLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVF------------LSQKNDVI 722
Cdd:PHA02562 226 ----VEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYekggvcptctqqISEGPDRI 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 723 --LKEHITELEKKLQLMVEERDNLNKLLE--NEQVQKLF-VKTQLYGFLKDMGSEVSEDGEEKDVVNILQA----VSESL 793
Cdd:PHA02562 302 tkIKDKLKELQHSLEKLDTAIDELEEIMDefNEQSKKLLeLKNKISTNKQSLITLVDKAKKVKAAIEELQAefvdNAEEL 381
|
250 260
....*....|....*....|
gi 966982780 794 AKINEEKCNLVFQCDKKVFE 813
Cdd:PHA02562 382 AKLQDELDKIVKTKSELVKE 401
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
985-1218 |
2.28e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 2.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 985 ELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLrnstl 1064
Cdd:COG4913 655 EYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEEL----- 729
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1065 qcekinsdnEDLLARIETLQSNAKLLEVQILEVQRAKAMVDkeleaeklQKEQKIKEHATtvNELEELQVQLQKEKKQLQ 1144
Cdd:COG4913 730 ---------DELQDRLEAAEDLARLELRALLEERFAAALGD--------AVERELRENLE--ERIDALRARLNRAEEELE 790
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966982780 1145 KTMQE-LELVKKDAQQTTLMNMEIADYERLMKELnqklsnKNNKIEDLEQEIKIQKQKQETlqEEITSLQSSVQQ 1218
Cdd:COG4913 791 RAMRAfNREWPAETADLDADLESLPEYLALLDRL------EEDGLPEYEERFKELLNENSI--EFVADLLSKLRR 857
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
916-1161 |
2.30e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 916 LEQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKekeekinkiklvavKAKKELDSSRKETQT 995
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR--------------ALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 996 VREELESLRSEKDQLSASMRDLIQAAesYKNLLLEYEKqseqLDVEKERANNFEHHVEDLTRQLRNSTLQCEKINSDNED 1075
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELLRAL--YRLGRQPPLA----LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1076 LLARIETLQSNAKLLEVQILEVQRAKamvdKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKK 1155
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEER----AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
....*.
gi 966982780 1156 DAQQTT 1161
Cdd:COG4942 238 AAAERT 243
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
986-1444 |
2.86e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 2.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 986 LDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNfehhvedltrQLRNSTLQ 1065
Cdd:TIGR04523 206 LKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKK----------QLSEKQKE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1066 CEKINSDNEDLLARIETLQSNAKLLEVQilevqrAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQK 1145
Cdd:TIGR04523 276 LEQNNKKIKELEKQLNQLKSEISDLNNQ------KEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKK 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1146 TMQELELVKKDAQ-QTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNT 1224
Cdd:TIGR04523 350 ELTNSESENSEKQrELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIE 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1225 KIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEItsekhkihehlKTSAEQHQRTLSAYRQRV 1304
Cdd:TIGR04523 430 RLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKI-----------KQNLEQKQKELKSKEKEL 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1305 TALQEESRAAKAEQATVTSEFESYKVRVhnvlkQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSEL 1384
Cdd:TIGR04523 499 KKLNEEKKELEEKVKDLTKKISSLKEKI-----EKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIEEL 573
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1385 QtlqsEHDTLLERHNKMLQETVSKEAELREKLCSIQSENMMMKSEHTQTVSQLTSQNEVL 1444
Cdd:TIGR04523 574 K----QTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKL 629
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
404-760 |
4.26e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.53 E-value: 4.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 404 IEKLKSELAGLnKQFCCTVEQHNKEVQSLKEQHQKEISEL-NETFLSDSEKEKLT-----LMFEIQGLKEQCDNLQQEKQ 477
Cdd:TIGR02169 683 LEGLKRELSSL-QSELRRIENRLDELSQELSDASRKIGEIeKEIEQLEQEEEKLKerleeLEEDLSSLEQEIENVKSELK 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 478 EAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVN-HLQGENEKLLSQQEL 556
Cdd:TIGR02169 762 ELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTlEKEYLEKEIQELQEQ 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 557 VPELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKINSLTEEkddfinkLKNSYEEMDNFHKKCEREERLILELGKKVEQ 636
Cdd:TIGR02169 842 RIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR-------LGDLKKERDELEAQLRELERKIEELEAQIEK 914
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 637 TTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVqMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEvfls 716
Cdd:TIGR02169 915 KRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS-LEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLD---- 989
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 966982780 717 qkndvilkehitELEKKLQLMVEERDNLNKLLE--NEQVQKLFVKT 760
Cdd:TIGR02169 990 ------------ELKEKRAKLEEERKAILERIEeyEKKKREVFMEA 1023
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
452-742 |
4.31e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.39 E-value: 4.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 452 EKEKLTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQAsDVHELQQKLRTAFT 531
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA-EEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 532 EKDALLETVNHLQGENEKLLSQQElvpELENTIKNLEEKngvyllsLSQRDTMLKELEAKINSLTEEKDDFINKLKNSYE 611
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELA---ELEEELEELEEE-------LEELEEELEEAEEELEEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 612 EMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVK 691
Cdd:COG1196 373 ELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEA 452
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 966982780 692 SLYEENNKLSSEKKQLSRDLEVFLSQKNDVILKEHITELEKKLQLMVEERD 742
Cdd:COG1196 453 ELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1091-1390 |
5.39e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1091 EVQILEVQRAKAMVDKELEAEKLQKEQKI---------KEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTT 1161
Cdd:TIGR02169 199 QLERLRREREKAERYQALLKEKREYEGYEllkekealeRQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELN 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1162 LMNMEIADYERL-----MKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKE 1236
Cdd:TIGR02169 279 KKIKDLGEEEQLrvkekIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1237 LADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEkhkiHEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKA 1316
Cdd:TIGR02169 359 YAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE----INELKRELDRLQEELQRLSEELADLNAAIAGIEA 434
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966982780 1317 EQATVTSEFESYKVRVHnvlKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSELQTLQSE 1390
Cdd:TIGR02169 435 KINELEEEKEDKALEIK---KQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1074-1318 |
5.47e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 47.98 E-value: 5.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1074 EDLLARIETLQSNaKLLEVQilevqraKAMVDKELEA--EKLQKEQKIKEhattvnELEELQVQLQKEKKQLQKTMQELE 1151
Cdd:PRK11281 39 ADVQAQLDALNKQ-KLLEAE-------DKLVQQDLEQtlALLDKIDRQKE------ETEQLKQQLAQAPAKLRQAQAELE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1152 LVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDL----EQEIKIQKQKqETLQEEITSLQSSVQQyeekntkIK 1227
Cdd:PRK11281 105 ALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLaeynSQLVSLQTQP-ERAQAALYANSQRLQQ-------IR 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1228 QLLVKTK---KELADSKQ----AETDHLILQASL-KGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQ-HQRTLS 1298
Cdd:PRK11281 177 NLLKGGKvggKALRPSQRvllqAEQALLNAQNDLqRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQEAiNSKRLT 256
|
250 260
....*....|....*....|
gi 966982780 1299 AYRQRVTALQEESRAAKAEQ 1318
Cdd:PRK11281 257 LSEKTVQEAQSQDEAARIQA 276
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
100-491 |
7.64e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 47.74 E-value: 7.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 100 KENIKMKQEVEDSVTKMEDAHKELEQSHINYVKEIENLKNELMAVRAKYSEDKANLQKELEEAMNKQLELSEQLKFQNNS 179
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 180 EDNVKKLQEEIEKIRPAFEEQILYLQKQldattdekKETVTQLQNIIEANSqhyqKNINSLQEELLQLKaIHQEEVKELM 259
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEEL--------EAQIEQLKEELKALR----EALDELRAELTLLN-EEAANLRERL 826
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 260 CQIEASAKEHETEINKLNELKENLVKQCEASEKNIqEKYECELENLRKATSNANQDNQMCSLLFQENTFVEQVVNEKVKH 339
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEI-EELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE 905
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 340 LEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEFKINELLLAKEEQgcvIEKLKSELAGLNKQFc 419
Cdd:TIGR02168 906 LESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDD---EEEARRRLKRLENKI- 981
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966982780 420 ctveqhnkevqslkeqhqKEISELNetflsdsekekLTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIME 491
Cdd:TIGR02168 982 ------------------KELGPVN-----------LAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIE 1024
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
334-775 |
9.08e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 47.32 E-value: 9.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 334 NEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKdEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELAG 413
Cdd:TIGR04523 165 KKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK-KKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 414 LNKQFCCTVEQHNK---EVQSLKEQHQKEISELNETFLSDSEKEKltlmfEIQGLKEQCDNLQQEKQEAILNY-----ES 485
Cdd:TIGR04523 244 KTTEISNTQTQLNQlkdEQNKIKKQLSEKQKELEQNNKKIKELEK-----QLNQLKSEISDLNNQKEQDWNKElkselKN 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 486 LREIMEILQTELGESAGKISQefesMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQELVPELENTIK 565
Cdd:TIGR04523 319 QEKKLEEIQNQISQNNKIISQ----LNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 566 NLEEKNGVYLLSLSQRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELE 645
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLS 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 646 QKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSR---DLEVFLSQKNDVI 722
Cdd:TIGR04523 475 RSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESkisDLEDELNKDDFEL 554
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 966982780 723 LKEHITELEKKLQLMVEERDNLNKLLENEQVQKLFVKTQLYGFLKDMGSEVSE 775
Cdd:TIGR04523 555 KKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEE 607
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
984-1414 |
1.03e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 984 KELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANnFEHHVEDLTRQLrnst 1063
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEA-LEAELAELPERL---- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1064 lqcekinsdnEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQL 1143
Cdd:COG4717 149 ----------EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1144 QktmQELELVKKDAQQTTLMNMEIADYERLMKELNQKLSnkNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKN 1223
Cdd:COG4717 219 Q---EELEELEEELEQLENELEAAALEERLKEARLLLLI--AAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1224 TKIKQLLVKTKKELADS------KQAETDHLILQASLKGELEASQQQVEVYKI-QLAEITSEKHKIHEHLKTsaEQHQRT 1296
Cdd:COG4717 294 AREKASLGKEAEELQALpaleelEEEELEELLAALGLPPDLSPEELLELLDRIeELQELLREAEELEEELQL--EELEQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1297 LSAYRQRVTALQEESRAAKAEQAtvtSEFESYKVRVhNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNN 1376
Cdd:COG4717 372 IAALLAEAGVEDEEELRAALEQA---EEYQELKEEL-EELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEE 447
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 966982780 1377 LQMNVSELQTLQSEHDTLLERHN--KMLQETVSKEAELRE 1414
Cdd:COG4717 448 LEELREELAELEAELEQLEEDGElaELLQELEELKAELRE 487
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
543-1279 |
1.12e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 543 LQGENEKLLSQQELVPELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKCER 622
Cdd:pfam02463 197 LQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 623 EERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSS 702
Cdd:pfam02463 277 EEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 703 EKKQLSRDLEVFLSQKNDVILKEHI-TELEKKLQLMVEERDNLNKLLENEQVQKLFVKTQLYGFLKDMGSEVSEDGEEKD 781
Cdd:pfam02463 357 EEEELEKLQEKLEQLEEELLAKKKLeSERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 782 VVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQ 861
Cdd:pfam02463 437 ESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALI 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 862 SDLLEMKNANEKTRLENQNLLIQVEEVsQTCNKNEIHNEKEKCSIKEHENLKPLLEQKESELRDTRAELILLKDSLAKSP 941
Cdd:pfam02463 517 KDGVGGRIISAHGRLGDLGVAVENYKV-AISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIA 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 942 SVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAA 1021
Cdd:pfam02463 596 VLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKEL 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1022 esyKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQ--- 1098
Cdd:pfam02463 676 ---LEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEeee 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1099 ---RAKAMVDKELEAEKLQKEqkikehattvNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMK 1175
Cdd:pfam02463 753 eksRLKKEEKEEEKSELSLKE----------KELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1176 ELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTK------IKQLLVKTKKELADSKQAETDHLI 1249
Cdd:pfam02463 823 LIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELllkeeeLEEQKLKDELESKEEKEKEEKKEL 902
|
730 740 750
....*....|....*....|....*....|
gi 966982780 1250 LQASLKGELEASQQQVEVYKIQLAEITSEK 1279
Cdd:pfam02463 903 EEESQKLNLLEEKENEIEERIKEEAEILLK 932
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1079-1278 |
1.18e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1079 RIETLQSNAKLLEvQILEV-QRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDA 1157
Cdd:COG4913 243 ALEDAREQIELLE-PIRELaERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1158 QQttlmnmEIADYERlmkelnQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKEL 1237
Cdd:COG4913 322 RE------ELDELEA------QIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA 389
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 966982780 1238 ADSKQAETDHLILQASLKGELEASQQQVevyKIQLAEITSE 1278
Cdd:COG4913 390 AALLEALEEELEALEEALAEAEAALRDL---RRELRELEAE 427
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1166-1355 |
1.19e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.36 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1166 EIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQssvQQYEEKNTKIKQLLVKTKKELADSKQAEt 1245
Cdd:COG3883 31 ELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAE---AEIEERREELGERARALYRSGGSVSYLD- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1246 dhLILQAS----LKGELEASQQQVEVYKIQLAEITSEKHKIhEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATV 1321
Cdd:COG3883 107 --VLLGSEsfsdFLDRLSALSKIADADADLLEELKADKAEL-EAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEAL 183
|
170 180 190
....*....|....*....|....*....|....
gi 966982780 1322 TSEFESYKVRVHNVLKQQKNKSMSQAETEGAKQE 1355
Cdd:COG3883 184 LAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
451-740 |
1.22e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 451 SEKEKLTLMFE-IQGLKEQCDNLQQEKQEAILNYESLREIMEILQTELGEsagkISQEFESMKQQQASDVHELQQKLRTA 529
Cdd:TIGR02169 671 SEPAELQRLRErLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGE----IEKEIEQLEQEEEKLKERLEELEEDL 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 530 FTEKDALLETVNHLQGENEKLLSQQELVPELENTIKNLEEkngvyllslSQRDTMLKELEAKINSLTEEKDDFINKLKNS 609
Cdd:TIGR02169 747 SSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEA---------RLSHSRIPEIQAELSKLEEEVSRIEARLREI 817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 610 YEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAE 689
Cdd:TIGR02169 818 EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQ 897
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 966982780 690 VKSLYEENNKLSSEKKQLSRDLEVFLSQKNdvILKEHITELEKKLQLMVEE 740
Cdd:TIGR02169 898 LRELERKIEELEAQIEKKRKRLSELKAKLE--ALEEELSEIEDPKGEDEEI 946
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
499-1423 |
1.36e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.96 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 499 ESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQELVPELENTIKNLEEKngvyLLSL 578
Cdd:TIGR00606 189 ETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHN----LSKI 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 579 SQRDTMLKELEAKINSLTEEKDDFINKLKNSYE-------EMDNFHKKCERE-ERLILELGKKVEQTTQYNSELEQKVNE 650
Cdd:TIGR00606 265 MKLDNEIKALKSRKKQMEKDNSELELKMEKVFQgtdeqlnDLYHNHQRTVREkERELVDCQRELEKLNKERRLLNQEKTE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 651 LtggleetlkEKDQNDQKLEKLMVQMKVLSEDKEVLSaevkslyeenNKLSSEKKQLSRDLEVFLSQKNDVILKEHITEL 730
Cdd:TIGR00606 345 L---------LVEQGRLQLQADRHQEHIRARDSLIQS----------LATRLELDGFERGPFSERQIKNFHTLVIERQED 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 731 EKKL--QLMVEERDNLNklLENEQVQKLFVKTQLYGFLKDMGSEVSEDGEE--KDVVNILQAVSESLAKINEEkcnlvfq 806
Cdd:TIGR00606 406 EAKTaaQLCADLQSKER--LKQEQADEIRDEKKGLGRTIELKKEILEKKQEelKFVIKELQQLEGSSDRILEL------- 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 807 cDKKVFELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKealqsdllemKNANEKTRLENQNLLIQVE 886
Cdd:TIGR00606 477 -DQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQ----------LNHHTTTRTQMEMLTKDKM 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 887 EVSQTCNKNEIHNEKEKCSIKEHENLKPLLE----QKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLE 962
Cdd:TIGR00606 546 DKDEQIRKIKSRHSDELTSLLGYFPNKKQLEdwlhSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYE 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 963 KEGKEKEEKINKIKlvavkakkELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLdveK 1042
Cdd:TIGR00606 626 DKLFDVCGSQDEES--------DLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAEL---Q 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1043 ERANNFEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEH 1122
Cdd:TIGR00606 695 EFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLL 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1123 ATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTlmNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQ 1202
Cdd:TIGR00606 775 GTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAA--KLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLI 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1203 ETLQEEITSLQSSV---------------------QQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEAS 1261
Cdd:TIGR00606 853 QDQQEQIQHLKSKTnelkseklqigtnlqrrqqfeEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSK 932
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1262 QQQVEVYKIQLAEITSEKHKIHEHLKT-----------SAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTSEFESYKV 1330
Cdd:TIGR00606 933 ETSNKKAQDKVNDIKEKVKNIHGYMKDienkiqdgkddYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKI 1012
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1331 RvHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNvsELQTLQSEHDTLLERHNKMLQETVSKEA 1410
Cdd:TIGR00606 1013 Q-ERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEE--NIDLIKRNHVLALGRQKGYEKEIKHFKK 1089
|
970
....*....|...
gi 966982780 1411 ELREKLCSIQSEN 1423
Cdd:TIGR00606 1090 ELREPQFRDAEEK 1102
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1106-1303 |
1.55e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1106 KELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKtMQELELVKKDAQQTTlmnmeiADYERLMKELnQKLSNKN 1185
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEIDVASAE------REIAELEAEL-ERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1186 NKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLL--VKTKKELADSKQAETDHLILQASLKGELEAsqq 1263
Cdd:COG4913 685 DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELdeLQDRLEAAEDLARLELRALLEERFAAALGD--- 761
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 966982780 1264 qvEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYRQR 1303
Cdd:COG4913 762 --AVERELRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1106-1483 |
1.59e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1106 KELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQqttlmnmeIADYERLMKELNQKLSNKN 1185
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ--------LLPLYQELEALEAELAELP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1186 NKIEDLEQEIkiqkQKQETLQEEITSLQSSVQQYEEK-NTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQ 1264
Cdd:COG4717 146 ERLEELEERL----EELRELEEELEELEAELAELQEElEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEE 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1265 VEVYKIQLAEITSEKHKIHEHLKTSAEQHQR-------TLSAYRQRVTALQEESRAAKAEQATVTSEFESYKVRVHNVLK 1337
Cdd:COG4717 222 LEELEEELEQLENELEAAALEERLKEARLLLliaaallALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1338 QQKNKSMSQAETEGAKQERehLEMLIDQLKIKLQDSQNNLQMNVSELQTLQSEHDTLLERHNKMLQET------------ 1405
Cdd:COG4717 302 KEAEELQALPALEELEEEE--LEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEEleqeiaallaea 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1406 -VSKEAELREKLcSIQSENMMMKSEHTQTVSQLTSQNEVLRNSFRD-----------QVRHLQEEHRKTVETLQQQLSRV 1473
Cdd:COG4717 380 gVEDEEELRAAL-EQAEEYQELKEELEELEEQLEELLGELEELLEAldeeeleeeleELEEELEELEEELEELREELAEL 458
|
410
....*....|
gi 966982780 1474 EAQLFQLKNE 1483
Cdd:COG4717 459 EAELEQLEED 468
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
585-866 |
1.90e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.21 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 585 LKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQ 664
Cdd:TIGR02169 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEN 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 665 NDQKLEKLMVQMKVLSEDKEVLSAEVKSLY-EENNKLSSEKKQLSRDLEVFLSQkndviLKEHITELEKKLQLMVEERDN 743
Cdd:TIGR02169 756 VKSELKELEARIEELEEDLHKLEEALNDLEaRLSHSRIPEIQAELSKLEEEVSR-----IEARLREIEQKLNRLTLEKEY 830
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 744 LNKLLENEQVQKLFVKTQLygflkdmgsevsedGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQE 823
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQI--------------KSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEA 896
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 966982780 824 esvvQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLE 866
Cdd:TIGR02169 897 ----QLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
694-1274 |
1.98e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.21 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 694 YEENNKLSSEKKQLSRDLEVFLSQKNDVilKEHITELEKKLQLMVEERDNLNKLLEneqvqklfvktQLYGFLKDMGSEV 773
Cdd:PRK03918 164 YKNLGEVIKEIKRRIERLEKFIKRTENI--EELIKEKEKELEEVLREINEISSELP-----------ELREELEKLEKEV 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 774 SEDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQE---------ESVVQCEELKSLLRDYEQEKV 844
Cdd:PRK03918 231 KELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEkvkelkelkEKAEEYIKLSEFYEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 845 LLRKELEEIQSEKEALQ---SDLLEMKNANEKTRLENQNLLIQVEEVSQTCN--------KNEIHNEKEKCSIKEHENLK 913
Cdd:PRK03918 311 EIEKRLSRLEEEINGIEeriKELEEKEERLEELKKKLKELEKRLEELEERHElyeeakakKEELERLKKRLTGLTPEKLE 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 914 PLLEQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLvaVKAKKELDSSRKET 993
Cdd:PRK03918 391 KELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELL--EEYTAELKRIEKEL 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 994 QTVREELESLRSEKDQLS---ASMRDLIQAAESYKnLLLEYEKQSEQLDVEKERANNFEHhvedltRQLRNSTLQCEKIN 1070
Cdd:PRK03918 469 KEIEEKERKLRKELRELEkvlKKESELIKLKELAE-QLKELEEKLKKYNLEELEKKAEEY------EKLKEKLIKLKGEI 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1071 SDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQEL 1150
Cdd:PRK03918 542 KSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKEL 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1151 ELVKKDAQQTTLMNMEI-ADYERLMKELNQKLSNKNnkiedlEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQL 1229
Cdd:PRK03918 622 KKLEEELDKAFEELAETeKRLEELRKELEELEKKYS------EEEYEELREEYLELSRELAGLRAELEELEKRREEIKKT 695
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 966982780 1230 LVKTKKELADSKQAETDHLILQASLKgELEASQQQVEVYKIQLAE 1274
Cdd:PRK03918 696 LEKLKEELEEREKAKKELEKLEKALE-RVEELREKVKKYKALLKE 739
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
603-1176 |
2.65e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 603 INKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKvneltggLEETLKEKDQNDQKLEKLMVQMKVLSED 682
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKE-------LEEVLREINEISSELPELREELEKLEKE 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 683 KEVLSaEVKSLYEENNKLSSEKKQLSRDLEVFLSQkndviLKEHITELEKKLQLMVEERDNLNKLlenEQVQKLFVKtqL 762
Cdd:PRK03918 230 VKELE-ELKEEIEELEKELESLEGSKRKLEEKIRE-----LEERIEELKKEIEELEEKVKELKEL---KEKAEEYIK--L 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 763 YGFLKDMGSEVSEDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQE---------ESVVQCEELK 833
Cdd:PRK03918 299 SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEErhelyeeakAKKEELERLK 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 834 SLLRDYEQEKvlLRKELEEIQSEKEALQ---SDLLEMKNANEKTRLENQNLLIQVEEVSQTCN--KNEIHNEKEKCSIKE 908
Cdd:PRK03918 379 KRLTGLTPEK--LEKELEELEKAKEEIEeeiSKITARIGELKKEIKELKKAIEELKKAKGKCPvcGRELTEEHRKELLEE 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 909 H----ENLKPLLEQKESELRDTRAELILLKDSLAKSPsvqnDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVKAKK 984
Cdd:PRK03918 457 YtaelKRIEKELKEIEEKERKLRKELRELEKVLKKES----ELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKE 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 985 ELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQ--SEQLDVEKE------------RANNFEH 1050
Cdd:PRK03918 533 KLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELgfESVEELEERlkelepfyneylELKDAEK 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1051 HVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDK-ELEAEKLQKEQKIKEHATTVNEL 1129
Cdd:PRK03918 613 ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYlELSRELAGLRAELEELEKRREEI 692
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 966982780 1130 EELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE 1176
Cdd:PRK03918 693 KKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKE 739
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1111-1324 |
2.67e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.69 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1111 EKLQKEQKIkehattvnELEELQVQLQKEK-----KQLQKTMQELELVKKDAQ-----QTTLMNMEIADYERLMKELNQK 1180
Cdd:PRK05771 23 EALHELGVV--------HIEDLKEELSNERlrklrSLLTKLSEALDKLRSYLPklnplREEKKKVSVKSLEELIKDVEEE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1181 LSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQ-----SSVQQYEEKNTKIKQLLVKTKKELADSKQAETD--HLILQAS 1253
Cdd:PRK05771 95 LEKIEKEIKELEEEISELENEIKELEQEIERLEpwgnfDLDLSLLLGFKYVSVFVGTVPEDKLEELKLESDveNVEYIST 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1254 LKG-------------------------------ELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYRQ 1302
Cdd:PRK05771 175 DKGyvyvvvvvlkelsdeveeelkklgferleleEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYE 254
|
250 260
....*....|....*....|..
gi 966982780 1303 rvtALQEESRAAKAEQATVTSE 1324
Cdd:PRK05771 255 ---YLEIELERAEALSKFLKTD 273
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
813-1157 |
2.92e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 813 ELEKEIKCLQEESvvqcEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLlemknANEKTRLENQNLLIQVEEVSQTC 892
Cdd:TIGR02169 685 GLKRELSSLQSEL----RRIENRLDELSQELSDASRKIGEIEKEIEQLEQEE-----EKLKERLEELEEDLSSLEQEIEN 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 893 NKNEI-HNEKEKCSIKEH-ENLKPLLEQKESELRDTR-----AELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEG 965
Cdd:TIGR02169 756 VKSELkELEARIEELEEDlHKLEEALNDLEARLSHSRipeiqAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEI 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 966 KEKEEKINKIKLVAVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERA 1045
Cdd:TIGR02169 836 QELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK 915
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1046 nnfEHHVEDLTRQLRNSTLQcekiNSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKeLEAEKLQKEQKIKEHATT 1125
Cdd:TIGR02169 916 ---RKRLSELKAKLEALEEE----LSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRA-LEPVNMLAIQEYEEVLKR 987
|
330 340 350
....*....|....*....|....*....|..
gi 966982780 1126 VNELEELQVQLQKEKKQLQKTMQELELVKKDA 1157
Cdd:TIGR02169 988 LDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1127-1476 |
3.25e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1127 NELEELQVQLQKEKKQLQKT---MQELELVKKDAQQTTLMNMEIA---DYERLMKELNQKLSNKNNKIEDLEQEIKIQKQ 1200
Cdd:PRK04863 786 KRIEQLRAEREELAERYATLsfdVQKLQRLHQAFSRFIGSHLAVAfeaDPEAELRQLNRRRVELERALADHESQEQQQRS 865
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1201 KQETLQEEITSLQSSVQQyeekntkIKQLLVKTKKELADSKQAEtdhliLQASLKGELEASQQQVEVYKI--QLAEITSE 1278
Cdd:PRK04863 866 QLEQAKEGLSALNRLLPR-------LNLLADETLADRVEEIREQ-----LDEAEEAKRFVQQHGNALAQLepIVSVLQSD 933
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1279 KHKiHEHLKTSAEQHQRTLSAYRQRVTALQE--ESRAAKA-EQAtvtsefesykvrvhnvlkqQKNKSMSQAETEGAKQE 1355
Cdd:PRK04863 934 PEQ-FEQLKQDYQQAQQTQRDAKQQAFALTEvvQRRAHFSyEDA-------------------AEMLAKNSDLNEKLRQR 993
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1356 REHLEMLIDQLKIKLQDSQNNLQMNVSELQTLQSEHDTLLERHNKMLQE----TVSKEAELREKLCSIQSENMMMKSEHT 1431
Cdd:PRK04863 994 LEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQElqdlGVPADSGAEERARARRDELHARLSANR 1073
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 966982780 1432 QTVSQLTSQnevlRNSFRDQVRHLQEEHRKTVETLQQQLSRVEAQ 1476
Cdd:PRK04863 1074 SRRNQLEKQ----LTFCEAEMDNLTKKLRKLERDYHEMREQVVNA 1114
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1162-1367 |
3.85e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 3.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1162 LMNMEIADYERLMKELNQK----LSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKEL 1237
Cdd:PHA02562 192 HIQQQIKTYNKNIEEQRKKngenIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKI 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1238 AD----------------SKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHE------HLKTSAEQHQR 1295
Cdd:PHA02562 272 EQfqkvikmyekggvcptCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEqskkllELKNKISTNKQ 351
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966982780 1296 TLSAYRQRVTALQEESRAAKAEQATVTSEFESYkvrVHNVLKQQKNKSmsqaeteGAKQEREHLEMLIDQLK 1367
Cdd:PHA02562 352 SLITLVDKAKKVKAAIEELQAEFVDNAEELAKL---QDELDKIVKTKS-------ELVKEKYHRGIVTDLLK 413
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1003-1255 |
3.92e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1003 LRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKEraNNFEHHVE---DLTRQLRNSTLQCEKINSDNEDLLAR 1079
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQ--NKYDELVEeakTIKAEIEELTDELLNLVMDIEDPSAA 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1080 IETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQkeQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELvkkdaqq 1159
Cdd:PHA02562 257 LNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCT--QQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEE------- 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1160 ttLMNmEIADYERLMKELNQKLSNKNNKIEDLEQEIKiqkqkqeTLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELAD 1239
Cdd:PHA02562 328 --IMD-EFNEQSKKLLELKNKISTNKQSLITLVDKAK-------KVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSE 397
|
250
....*....|....*.
gi 966982780 1240 SKQAETDHLILQASLK 1255
Cdd:PHA02562 398 LVKEKYHRGIVTDLLK 413
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
979-1366 |
4.49e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 979 AVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDL---IQAAESYKNLLLEYEKQSEQLDvekeranNFEHHVEDL 1055
Cdd:COG3096 287 ALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLeqdYQAASDHLNLVQTALRQQEKIE-------RYQEDLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1056 TRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAkamVDkELEAEKLQKEQKIK--EHATTVNELEEL- 1132
Cdd:COG3096 360 TERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQA---LD-VQQTRAIQYQQAVQalEKARALCGLPDLt 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1133 -------QVQLQKEKKQLQKTMQELElvkkdaQQTTLMNMEIADYERLMkELNQKLSNKNNK-------IEDLEQ--EIK 1196
Cdd:COG3096 436 penaedyLAAFRAKEQQATEEVLELE------QKLSVADAARRQFEKAY-ELVCKIAGEVERsqawqtaRELLRRyrSQQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1197 IQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAETdhliLQASLKGELEASQQQVEVYKIQLAEIT 1276
Cdd:COG3096 509 ALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEE----LLAELEAQLEELEEQAAEAVEQRSELR 584
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1277 SEKHKIHEHLKTSAEQHQRTLSAyRQRVTALQEESRAAKAEQATVTSEFEsykvrvhNVLKQQKNKSMSQAETEgakQER 1356
Cdd:COG3096 585 QQLEQLRARIKELAARAPAWLAA-QDALERLREQSGEALADSQEVTAAMQ-------QLLEREREATVERDELA---ARK 653
|
410
....*....|
gi 966982780 1357 EHLEMLIDQL 1366
Cdd:COG3096 654 QALESQIERL 663
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
739-1312 |
4.58e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 4.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 739 EERDNLNKLLENEQVQKlFVKTQLYGFLKDMGSEVSEDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEK-- 816
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRK-FEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKad 1318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 817 EIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTcnkNE 896
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKA---DE 1395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 897 IHNEKEKCSIKEHENLKPLLEQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIK 976
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA 1475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 977 LVAVKAKKELDSSRKETQTVREELESLR--SEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDV--EKERANNFEHHV 1052
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKkaAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKaeEKKKADELKKAE 1555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1053 EDLTRQLRNSTLQCEKINSDNEDLLARIETlqsnAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEEL 1132
Cdd:PTZ00121 1556 ELKKAEEKKKAEEAKKAEEDKNMALRKAEE----AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE 1631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1133 QVQLQKEKKQLQKTMQELELVKKDAQQTTLMNmeiadyerlmKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEitsl 1212
Cdd:PTZ00121 1632 KKKVEQLKKKEAEEKKKAEELKKAEEENKIKA----------AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE---- 1697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1213 qssvQQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQ 1292
Cdd:PTZ00121 1698 ----AEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEI 1773
|
570 580
....*....|....*....|
gi 966982780 1293 HQRTLSAYRQRVTALQEESR 1312
Cdd:PTZ00121 1774 RKEKEAVIEEELDEEDEKRR 1793
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
131-479 |
4.73e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.06 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 131 VKEIENLKNELMAVRAKYSEDKANLQKELEEAMNKQLELSEQLKfqnNSEDNVKKLQEEIEKIRPAfeeqilylQKQLDA 210
Cdd:TIGR02169 697 LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLE---ELEEDLSSLEQEIENVKSE--------LKELEA 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 211 TTDEKKETVTQLQNIIEANSQHY-QKNINSLQEELLQLKAIHQEevkelmcqIEASAKEHETEINKLNELKENLvkqcea 289
Cdd:TIGR02169 766 RIEELEEDLHKLEEALNDLEARLsHSRIPEIQAELSKLEEEVSR--------IEARLREIEQKLNRLTLEKEYL------ 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 290 sEKNIQekyecELENLRKATSnaNQDNQMCSLLFQENTFVEQvVNEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLE 369
Cdd:TIGR02169 832 -EKEIQ-----ELQEQRIDLK--EQIKSIEKEIENLNGKKEE-LEEELEELEAALRDLESRLGDLKKERDELEAQLRELE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 370 MDAQHIKDEFFHEREDLEfKINELLLAKEEQGCVIEKLKSEL---------AGLNKQFCCTVEQhnkEVQSLKEQHQKEI 440
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLS-ELKAKLEALEEELSEIEDPKGEDeeipeeelsLEDVQAELQRVEE---EIRALEPVNMLAI 978
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 966982780 441 SELNETF--LSDSEKEKLTLMFEIQGLKEQCDNLQQEKQEA 479
Cdd:TIGR02169 979 QEYEEVLkrLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
592-1234 |
4.96e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.63 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 592 INSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEK 671
Cdd:TIGR04523 28 ANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 672 LMVQMKVLSEDKEVLSAEVKSLYEENN-------KLSSEKKQLSRDLEVFLSQKNDviLKEHITELEKKLQLMVEERDNL 744
Cdd:TIGR04523 108 INSEIKNDKEQKNKLEVELNKLEKQKKenkknidKFLTEIKKKEKELEKLNNKYND--LKKQKEELENELNLLEKEKLNI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 745 NKLLENEQVQKLfvktQLYGFLKDMGSEVSEDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKKVFELEKEIKCLQEE 824
Cdd:TIGR04523 186 QKNIDKIKNKLL----KLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 825 SVVQCEELKSLLRDYEQEKVL---LRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCNKNEIHNEK 901
Cdd:TIGR04523 262 QNKIKKQLSEKQKELEQNNKKikeLEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLN 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 902 EKCSikeheNLKPLLEQKESELRDTRAELILLKDSLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINKIKLVAVK 981
Cdd:TIGR04523 342 EQIS-----QLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 982 AKKELDSSRKETQTVREELESLRSEKDQLSASMRDLiqaAESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLRN 1061
Cdd:TIGR04523 417 LQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVK---ELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1062 STLQCEKINSDNEDLLARIETLQSNAKLLEVQIlevqrakamvdKELEAEKLQKEQKIKEHATTVNELEEL--QVQLQKE 1139
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKKISSLKEKI-----------EKLESEKKEKESKISDLEDELNKDDFElkKENLEKE 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1140 KKQLQKTMQELELVKKDAQQTTLMNMEIAD-YERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQ 1218
Cdd:TIGR04523 563 IDEKNKEIEELKQTQKSLKKKQEEKQELIDqKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNK 642
|
650
....*....|....*.
gi 966982780 1219 YEEKNTKIKQLLVKTK 1234
Cdd:TIGR04523 643 LKQEVKQIKETIKEIR 658
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
87-350 |
5.03e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.07 E-value: 5.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 87 EKAETEQQCLSLKKENIkmkqeVEDSVTKMEDAHKELEQSHINyVKEIENLKNELMAVRAKYSEDKANLQKeleeamnkq 166
Cdd:COG5022 853 RSLKAKKRFSLLKKETI-----YLQSAQRVELAERQLQELKID-VKSISSLKLVNLELESEIIELKKSLSS--------- 917
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 167 lELSEQLKFQNNSEDNVKKLQEEIEKIRPAFEEQILYLQKQLDATTDEK-KETVTQLQNIIEANSQHYQKNINSLqEELL 245
Cdd:COG5022 918 -DLIENLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELNKLHEVESKlKETSEEYEDLLKKSTILVREGNKAN-SELK 995
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 246 QLKAIHQEEVKELMcQIEASAKEHETEINKLNELKENLVKQCEASEKNIQEKYECELENLRKATSNANQDNQMCSLLFQE 325
Cdd:COG5022 996 NFKKELAELSKQYG-ALQESTKQLKELPVEVAELQSASKIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRE 1074
|
250 260
....*....|....*....|....*...
gi 966982780 326 NTFVEQV---VNEKVKHLEDTLKELESQ 350
Cdd:COG5022 1075 NSLLDDKqlyQLESTENLLKTINVKDLE 1102
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1188-1416 |
5.24e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 5.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1188 IEDLEQEIKIQKQKQETLqEEITSLQSSVQQYEEKNTKIKQLlvktkKELADSKQAETDHLILQAslkgELEASQQQVEV 1267
Cdd:COG4913 237 LERAHEALEDAREQIELL-EPIRELAERYAAARERLAELEYL-----RAALRLWFAQRRLELLEA----ELEELRAELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1268 YKIQLAEITSEKHKIHEHLktsAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTSEFESYKVRVHNV-LKQ-------Q 1339
Cdd:COG4913 307 LEAELERLEARLDALREEL---DELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALgLPLpasaeefA 383
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1340 KNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNnlqmnvsELQTLQSEHDTLLERHNKMLQETVSKEAELREKL 1416
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRR-------ELRELEAEIASLERRKSNIPARLLALRDALAEAL 453
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
994-1151 |
6.28e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 6.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 994 QTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERAnnfEHHVEDLTRQLRNSTLQCEKINSDN 1073
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL---ELEIEEVEARIKKYEEQLGNVRNNK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1074 E--DLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELE 1151
Cdd:COG1579 90 EyeALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
|
| CC149 |
pfam09789 |
Coiled-coil domain-containing protein 149-A; Members of this family have been annotated as ... |
983-1219 |
6.29e-04 |
|
Coiled-coil domain-containing protein 149-A; Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function.
Pssm-ID: 462902 [Multi-domain] Cd Length: 314 Bit Score: 43.86 E-value: 6.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 983 KKELDSSRKETQTVREELESLRSEKDQLSAsmrdliqAAESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLRNS 1062
Cdd:pfam09789 1 KRKLQSKVEALLILSKELEKCRQERDQYKL-------MAEQLQERYQGLKKQLRELKAGNNDFKPDDREQVNLIQLLRDS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1063 TLQCEKINSDNEDLLARIETLQSNAKLLEVQIlEVQRAKAMVDKELEAEKLQKEQKIKehatTVNELEELQVQLQKEKKQ 1142
Cdd:pfam09789 74 REQNKCLRLEVEELRQKLNEAQGDIKLLREQI-ARQRLGGPDEGSISTRHFPLHEREE----LVKQLEKLRKKCQQLERD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1143 LQKTMQELE--LVKKDAQQTtlmnmeiaDYERLMKELNQKLSNKNNKIEDLEQ---EIKIQKQKQETLQEEITSLQSSVQ 1217
Cdd:pfam09789 149 LQSVLDEKEelETERDAYKC--------KAHRLNHELNYILGGDESRIVDIDAlimENRYLQERLKQLEEEKELAKQTLS 220
|
..
gi 966982780 1218 QY 1219
Cdd:pfam09789 221 KY 222
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
415-817 |
6.81e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 44.68 E-value: 6.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 415 NKQFCCTVEQHNKEVQSLKEQHQKEISELNETFLS-DSEKEKLTLMFEIQglkeqcdNLQQEKQEAILNYESlreimEIL 493
Cdd:COG5022 780 GFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSyLACIIKLQKTIKRE-------KKLRETEEVEFSLKA-----EVL 847
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 494 QTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQqelVPELENTIKNLEEKNgv 573
Cdd:COG5022 848 IQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESE---IIELKKSLSSDLIEN-- 922
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 574 yLLSLSQRDTMLKELEAKINSLTE-EKDDFINKLKNSY-EEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNEL 651
Cdd:COG5022 923 -LEFKTELIARLKKLLNNIDLEEGpSIEYVKLPELNKLhEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKEL 1001
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 652 TGGLEEtlKEKDQNDQKleklmvqmkvLSEDKEVLSAEVKSLYeenNKLSSEKKQLSRDLEVfLSQKNDVILKEHITELE 731
Cdd:COG5022 1002 AELSKQ--YGALQESTK----------QLKELPVEVAELQSAS---KIISSESTELSILKPL-QKLKGLLLLENNQLQAR 1065
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 732 -KKLQLMVEERDNLNKLLENEQVQKLFVKTQLYGFLKdMGSEVSEDGEEKDVVNILQAVSESLAKINEEKCNLVFQCDKK 810
Cdd:COG5022 1066 yKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLE-VTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEP 1144
|
....*..
gi 966982780 811 VFELEKE 817
Cdd:COG5022 1145 VFQKLSV 1151
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
335-532 |
7.92e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 7.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 335 EKVKHLEDTLKELESQHSILKDEVTymnnlKLKLEMDAQHIKDEFFHEREDLEFKINELLLAKEEqgcvIEKLKSELAGL 414
Cdd:COG4913 610 AKLAALEAELAELEEELAEAEERLE-----ALEAELDALQERREALQRLAEYSWDEIDVASAERE----IAELEAELERL 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 415 nkqfcctvEQHNKEVQSLKEQHQKEISELNETflsdsEKEKLTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIMEILQ 494
Cdd:COG4913 681 --------DASSDDLAALEEQLEELEAELEEL-----EEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL 747
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 966982780 495 TELGE----------SAGKISQEFESMKQQQASDVHELQQKLRTAFTE 532
Cdd:COG4913 748 RALLEerfaaalgdaVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1282-1483 |
8.61e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 8.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1282 IHEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAEqatvtseFESYKVRvHNVLKQQKNKSMSQAETEGAKQEREHLEM 1361
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAA-------LEEFRQK-NGLVDLSEEAKLLLQQLSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1362 LIDQLKIKLQDSQNNLQMNVSELQTLQSehDTLLERHNKMLQETVSKEAELREKLcsiqsenmmmKSEHtQTVSQLTSQN 1441
Cdd:COG3206 234 ELAEAEARLAALRAQLGSGPDALPELLQ--SPVIQQLRAQLAELEAELAELSARY----------TPNH-PDVIALRAQI 300
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 966982780 1442 EVLRNSFRDQVRHLQEEHRKTVETLQQQLSRVEAQLFQLKNE 1483
Cdd:COG3206 301 AALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
462-756 |
9.69e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 9.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 462 IQGLKEQCDNLQQEKQEAiLNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETV- 540
Cdd:COG1196 195 LGELERQLEPLERQAEKA-ERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELr 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 541 NHLQGENEKLLSQQELVPELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKC 620
Cdd:COG1196 274 LELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 621 EREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKL 700
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966982780 701 SSEKKQLSRDLEVFLSQKNDVI-----LKEHITELEKKLQLMVEERDNLNKLLENEQVQKL 756
Cdd:COG1196 434 EEEEEEEEEALEEAAEEEAELEeeeeaLLELLAELLEEAALLEAALAELLEELAEAAARLL 494
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1080-1328 |
9.74e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 9.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1080 IETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQ 1159
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1160 T----TLMNM-----EIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKntkikqll 1230
Cdd:COG3883 98 SggsvSYLDVllgseSFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAA-------- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1231 vktkKELADSKQAETDHLIlqASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYRQRVTALQEE 1310
Cdd:COG3883 170 ----KAELEAQQAEQEALL--AQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 243
|
250
....*....|....*...
gi 966982780 1311 SRAAKAEQATVTSEFESY 1328
Cdd:COG3883 244 ASAAGAGAAGAAGAAAGS 261
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
603-1346 |
1.19e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 603 INKLKNSYEEMDNFHKKCEREERLILELGKKVEQTT-QYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSE 681
Cdd:pfam12128 250 FNTLESAELRLSHLHFGYKSDETLIASRQEERQETSaELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALED 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 682 DKEV-LSAEVKSLYEENNKL---SSEKKQLSRDLEVFLSQKNDVILKEHITELEKKLQLmVEERDNLNKLLENEQVQKlf 757
Cdd:pfam12128 330 QHGAfLDADIETAAADQEQLpswQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQN-NRDIAGIKDKLAKIREAR-- 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 758 vktqlygflkDMGSEVSEDGEEKDVVNILQAVSESLAKINEEKcnlvfqcdkKVFELEKEIKCLQEESVVQCEELKSLLR 837
Cdd:pfam12128 407 ----------DRQLAVAEDDLQALESELREQLEAGKLEFNEEE---------YRLKSRLGELKLRLNQATATPELLLQLE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 838 DYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCNKNEIHNEKEKCSIKEH-ENLKPLL 916
Cdd:pfam12128 468 NFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFlRKEAPDW 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 917 EQKESELRDTraELILLKD---SLAKSPSVQNDLLSSVKELEEKLENLEKEGKEKEEKINkiklvAVKAKKELDSSRKET 993
Cdd:pfam12128 548 EQSIGKVISP--ELLHRTDldpEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRER-----LDKAEEALQSAREKQ 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 994 QTVREELESLRSEKDQLSASMRDLIQAAESYKNLL--LEYEKQSEQLDVEKERANNFEHHVEDLT------RQLRNStLQ 1065
Cdd:pfam12128 621 AAAEEQLVQANGELEKASREETFARTALKNARLDLrrLFDEKQSEKDKKNKALAERKDSANERLNsleaqlKQLDKK-HQ 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1066 CEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQK 1145
Cdd:pfam12128 700 AWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRT 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1146 TMQELELVKKDAQqttlmnmEIADYERLMKE--------LNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQ 1217
Cdd:pfam12128 780 LERKIERIAVRRQ-------EVLRYFDWYQEtwlqrrprLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASE 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1218 QYEEKNTKIKQLLVKTKKELADSKQAETDhlilqASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRtl 1297
Cdd:pfam12128 853 KQQVRLSENLRGLRCEMSKLATLKEDANS-----EQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHSG-- 925
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 966982780 1298 SAYRQRVTALQEESRAAKAEQATVTSEFESYKVR--VHNVLKQQKNKSMSQ 1346
Cdd:pfam12128 926 SGLAETWESLREEDHYQNDKGIRLLDYRKLVPYLeqWFDVRVPQSIMVLRE 976
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
100-735 |
1.26e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.47 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 100 KENIKMKQEVEDSVTKMEDAHKELEQSHINYVKEIENLKNELMAVRAKYSEdkanLQKELEEAMNKQLELSEQLKFQNNS 179
Cdd:TIGR04523 113 KNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYND----LKKQKEELENELNLLEKEKLNIQKN 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 180 EDNVKKLQEEIEKIRPAFEEQIlYLQKQLDATTDEKKETVTQLQNIIEANSQHYQK---NINSLQEELLQLKAIHQEEVK 256
Cdd:TIGR04523 189 IDKIKNKLLKLELLLSNLKKKI-QKNKSLESQISELKKQNNQLKDNIEKKQQEINEkttEISNTQTQLNQLKDEQNKIKK 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 257 ELmcqiEASAKEHETEINKLNELKENLVKQCEASEKNIQEKYECELENLRKATSNANQDNQMCSLLFQENTFVEQVVNEK 336
Cdd:TIGR04523 268 QL----SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQ 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 337 VKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEFFH---EREDLEFKINELLLAKEEQGCVIEKLKSELAG 413
Cdd:TIGR04523 344 ISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNlesQINDLESKIQNQEKLNQQKDEQIKKLQQEKEL 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 414 LNKQ---FCCTVEQHNKEVQSLKEQ-HQKEISELNETFLSDSEKEKL-TLMFEIQGLKEQCDNLQQEKQEAILNYESLRE 488
Cdd:TIGR04523 424 LEKEierLKETIIKNNSEIKDLTNQdSVKELIIKNLDNTRESLETQLkVLSRSINKIKQNLEQKQKELKSKEKELKKLNE 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 489 IMEILQTELGESAGKISqEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQELVpELENTIKNLE 568
Cdd:TIGR04523 504 EKKELEEKVKDLTKKIS-SLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIE-ELKQTQKSLK 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 569 EKNgvyllslSQRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKV 648
Cdd:TIGR04523 582 KKQ-------EEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 649 NELTGGLEETLKEKDQNDQKLEKLMVQMKV-LSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKNDVILKEHI 727
Cdd:TIGR04523 655 KEIRNKWPEIIKKIKESKTKIDDIIELMKDwLKELSLHYKKYITRMIRIKDLPKLEEKYKEIEKELKKLDEFSKELENII 734
|
....*...
gi 966982780 728 TELEKKLQ 735
Cdd:TIGR04523 735 KNFNKKFD 742
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
991-1504 |
1.63e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 991 KETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNFEHHVEDLTRQLRNSTLQCEKIN 1070
Cdd:PTZ00121 1284 KKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAE 1363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1071 SDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELE----AEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKT 1146
Cdd:PTZ00121 1364 EKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEdkkkADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEA 1443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1147 MQELELVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQ--EEITSLQSSVQQYEEKNT 1224
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKkaAEAKKKADEAKKAEEAKK 1523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1225 KIKQLLVKTKKELADSKQAEtdhlilQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYRQRV 1304
Cdd:PTZ00121 1524 ADEAKKAEEAKKADEAKKAE------EKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV 1597
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1305 TALQEESRAAKAEQATVTSEFESYKVRVHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSEL 1384
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKA 1677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1385 QTLQSEhdtllERHNKMLQETVSKEAELREKLCSIQSEnmmmKSEHTQTVSQLTSQNEVLRNSFRDQVRHLQEEHRKTVE 1464
Cdd:PTZ00121 1678 EEAKKA-----EEDEKKAAEALKKEAEEAKKAEELKKK----EAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 966982780 1465 TLQQQLSRVEAQLFQLKNEPTTRSMPSFLSTIFEEPSRKE 1504
Cdd:PTZ00121 1749 AKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEE 1788
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1042-1415 |
1.97e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1042 KERANNFEHHVEDLTRQLRNSTLQCEKINSDNE--DLLARIETLQSNAKLLEVQI--LEVQRAKAMVDKELEAEKL---- 1113
Cdd:PRK02224 168 RERASDARLGVERVLSDQRGSLDQLKAQIEEKEekDLHERLNGLESELAELDEEIerYEEQREQARETRDEADEVLeehe 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1114 QKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE-LNQKLSNKNNKIEDLE 1192
Cdd:PRK02224 248 ERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEaVEARREELEDRDEELR 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1193 QEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQL 1272
Cdd:PRK02224 328 DRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1273 -------AEITSEKHKIHEHLkTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTSEfesykvRVHNVLKQQKNKSMS 1345
Cdd:PRK02224 408 gnaedflEELREERDELRERE-AELEATLRTARERVEEAEALLEAGKCPECGQPVEGSP------HVETIEEDRERVEEL 480
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966982780 1346 QAETEGAKQEREHLEMLIDQLK--IKLQDSQNNLQMNVSELQTLQSEHDTLLERHNKMLQETVSKEAELREK 1415
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAEdlVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAE 552
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
983-1441 |
2.31e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 983 KKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEyeKQSEQLDVEKERANNFEHHVEDLTRQLRns 1062
Cdd:pfam12128 289 NQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLD--ADIETAAADQEQLPSWQSELENLEERLK-- 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1063 tLQCEKINsdneDLLARIETLQSNAKLLEVQILEVqrakamVDKELEAeklQKEQKIKEHATTVNELEELQVQLQK---- 1138
Cdd:pfam12128 365 -ALTGKHQ----DVTAKYNRRRSKIKEQNNRDIAG------IKDKLAK---IREARDRQLAVAEDDLQALESELREqlea 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1139 -------EKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITS 1211
Cdd:pfam12128 431 gklefneEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQ 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1212 LQSSVQQYEEKNTKIKQ--------LLVKTKKELADSKQAE----TDHLILQASLKGELEASQ--QQVEVYKIQL---AE 1274
Cdd:pfam12128 511 ASRRLEERQSALDELELqlfpqagtLLHFLRKEAPDWEQSIgkviSPELLHRTDLDPEVWDGSvgGELNLYGVKLdlkRI 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1275 ITSEKHKIHEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAE----QATVTSEFESYK-----VRVHNVLKQQKNKSMS 1345
Cdd:pfam12128 591 DVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGElekaSREETFARTALKnarldLRRLFDEKQSEKDKKN 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1346 QAETEGAKQEREHLEMLIDQLKIKLQDSQnnlqmnvselQTLQSEHDTLLERHNKMLQETVSKEAELREKLCSIQSENMM 1425
Cdd:pfam12128 671 KALAERKDSANERLNSLEAQLKQLDKKHQ----------AWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAA 740
|
490
....*....|....*.
gi 966982780 1426 MKSEHTQTVSQLTSQN 1441
Cdd:pfam12128 741 RRSGAKAELKALETWY 756
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
978-1229 |
2.49e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 978 VAVKAKKELDSSRKETQtvREELESLRSEKDQLSAS-MRDLiqaaesyKNLLLEYEKQSEQLDVEKERANNFEHHVEDLT 1056
Cdd:pfam17380 342 MAMERERELERIRQEER--KRELERIRQEEIAMEISrMREL-------ERLQMERQQKNERVRQELEAARKVKILEEERQ 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1057 RQLRNSTLQCEKINSDnedllarietlQSNAKLLEVQILEVQRAKAMvdKELEAEKLQKEQKIKEhaTTVNELEELQVQL 1136
Cdd:pfam17380 413 RKIQQQKVEMEQIRAE-----------QEEARQREVRRLEEERAREM--ERVRLEEQERQQQVER--LRQQEEERKRKKL 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1137 QKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNKI-EDLEQEIKIQKQKQETLQEEITSLQSS 1215
Cdd:pfam17380 478 ELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIyEEERRREAEEERRKQQEMEERRRIQEQ 557
|
250
....*....|....
gi 966982780 1216 VQQYEEKNTKIKQL 1229
Cdd:pfam17380 558 MRKATEERSRLEAM 571
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
1075-1227 |
2.51e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.96 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1075 DLLARIETLQSNAKLLEVQIlEVQRAKAMVDKeLEAEKLQKEQKikehATTVNELEELQVQLQKEKKQLQKTMQeleLVK 1154
Cdd:COG1566 71 QVLARLDPTDLQAALAQAEA-QLAAAEAQLAR-LEAELGAEAEI----AAAEAQLAAAQAQLDLAQRELERYQA---LYK 141
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1155 KDA--QQttlmnmEIADYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQEtLQEEITSLQSSVQQYEE--KNTKIK 1227
Cdd:COG1566 142 KGAvsQQ------ELDEARAALDAAQAQLEAAQAQLAQAQAGLREEEELAA-AQAQVAQAEAALAQAELnlARTTIR 211
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1069-1207 |
3.22e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.12 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1069 INSDNEDLLARIETLQSNAKLLEVQILEVQRakamvdKELEAEKLQKEQKikehattvNELEELQVQLQKEKKQLQKTMQ 1148
Cdd:PRK00409 511 IGEDKEKLNELIASLEELERELEQKAEEAEA------LLKEAEKLKEELE--------EKKEKLQEEEDKLLEEAEKEAQ 576
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966982780 1149 E-LELVKKDAQQT--TLMNMEIADYERL-MKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQE 1207
Cdd:PRK00409 577 QaIKEAKKEADEIikELRQLQKGGYASVkAHELIEARKRLNKANEKKEKKKKKQKEKQEELKV 639
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1102-1352 |
3.36e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1102 AMVDKELEAEKLQKEQKIKEHATTVNELEELQvqlqkekKQLQKTMQELElvkkdaqqttlmnmeiadyerlmkELNQKL 1181
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQ-------AELEELNEEYN------------------------ELQAEL 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1182 SNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLvkTKKELAD--------SKQAETDHLILQas 1253
Cdd:COG3883 61 EALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYLDVLL--GSESFSDfldrlsalSKIADADADLLE-- 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1254 lkgELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTSEFESYKVRVH 1333
Cdd:COG3883 137 ---ELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAA 213
|
250
....*....|....*....
gi 966982780 1334 NVLKQQKNKSMSQAETEGA 1352
Cdd:COG3883 214 AAAAAAAAAAAAAAAAAAA 232
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1092-1374 |
3.48e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1092 VQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLmnmEIADYE 1171
Cdd:COG4372 24 ILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQA---ELAQAQ 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1172 RLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQ 1251
Cdd:COG4372 101 EELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1252 ASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATVTSEFESYKVR 1331
Cdd:COG4372 181 AEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEI 260
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 966982780 1332 VHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQ 1374
Cdd:COG4372 261 EELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLN 303
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
322-672 |
3.56e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.98 E-value: 3.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 322 LFQENTFVEQVVNEKVKHLEDT---LKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEffheREDLEFKINELLLAKE 398
Cdd:TIGR02169 693 LQSELRRIENRLDELSQELSDAsrkIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE----IENVKSELKELEARIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 399 EQGCVIEKLKSELAGLNKQFCCT-VEQHNKEVQSLKEQHQKEISELNET--FLSDSEKEKLTLMFEIQGLKEQCDNLQQE 475
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSrIPEIQAELSKLEEEVSRIEARLREIeqKLNRLTLEKEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 476 KQEAILNYESLREIMEILQTELGESAGKIsQEFESMKQQQASDVHELQQKLRTAFTEKDAL---LETVNHLQGE-NEKLL 551
Cdd:TIGR02169 849 IKSIEKEIENLNGKKEELEEELEELEAAL-RDLESRLGDLKKERDELEAQLRELERKIEELeaqIEKKRKRLSElKAKLE 927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 552 SQQELVPELENTIKNLEEKNGVyLLSLSQRDTMLKELEAKINSLTEEKDDFINKLKNS---YEEMDNFHKKCEREERLIL 628
Cdd:TIGR02169 928 ALEEELSEIEDPKGEDEEIPEE-ELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVlkrLDELKEKRAKLEEERKAIL 1006
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 966982780 629 ELGKKVEQT---------TQYNS----------------ELEQKVNELTGGLEETLKEKDQNDQKLEKL 672
Cdd:TIGR02169 1007 ERIEEYEKKkrevfmeafEAINEnfneifaelsggtgelILENPDDPFAGGLELSAKPKGKPVQRLEAM 1075
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1088-1222 |
3.68e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.69 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1088 KLLEVQILEV-QRAKAMVD---KELEAEKLQKEQKIKEhattvnELEELQVQLQKEKKQLQKTMQELElvkkdaqqttlm 1163
Cdd:PRK12704 27 KIAEAKIKEAeEEAKRILEeakKEAEAIKKEALLEAKE------EIHKLRNEFEKELRERRNELQKLE------------ 88
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 966982780 1164 nmeiadyERLMKELNQkLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEK 1222
Cdd:PRK12704 89 -------KRLLQKEEN-LDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEE 139
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
423-692 |
3.88e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.85 E-value: 3.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 423 EQHNKEVQSLKEQHQKEISELNETflsdsEKEKLTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIMEILQ---TELGE 499
Cdd:COG1196 242 EELEAELEELEAELEELEAELAEL-----EAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEerrRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 500 SAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQELVPELENTIKNLEEKNGVYLLSLS 579
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 580 QRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETL 659
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260 270
....*....|....*....|....*....|...
gi 966982780 660 KEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKS 692
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
98-292 |
3.96e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 98 LKKENIKMKQEVEDSVTKMEDAHKELEQSHINYVKEIENLKNELmavrAKYSEDKANLQKELEEAM---NKQLELSEQLK 174
Cdd:PRK05771 66 LPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEI----SELENEIKELEQEIERLEpwgNFDLDLSLLLG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 175 FQNN-------SEDNVKKLQEEIEKIRPAFEEQ--------ILYLQKQLDATTDEKKEtvTQLQNIIEANSQHYQKNINS 239
Cdd:PRK05771 142 FKYVsvfvgtvPEDKLEELKLESDVENVEYISTdkgyvyvvVVVLKELSDEVEEELKK--LGFERLELEEEGTPSELIRE 219
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 966982780 240 LQEELLQLKAIhQEEVKElmcQIEASAKEHETEINKLNELKENLVKQCEASEK 292
Cdd:PRK05771 220 IKEELEEIEKE-RESLLE---ELKELAKKYLEELLALYEYLEIELERAEALSK 268
|
|
| YydB |
COG5293 |
Uncharacterized conserved protein YydD, contains DUF2326 domain [Function unknown]; |
472-740 |
4.00e-03 |
|
Uncharacterized conserved protein YydD, contains DUF2326 domain [Function unknown];
Pssm-ID: 444096 [Multi-domain] Cd Length: 572 Bit Score: 41.86 E-value: 4.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 472 LQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEK--DALLETVNHLQGENEK 549
Cdd:COG5293 182 LAAEKYELKEEIKELKKLRKALKDELIGSVVKSISELRAEILELEEEIEKLEKDLEKFDVAEnyEELEKELDELKREINE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 550 LLSQQElvpELENTIKNLEEkngvyllSL-SQRDTMLKELEAKINSLTEEKDDFINKlknSYEEMDNFHKKCEREERliL 628
Cdd:COG5293 262 LRNERY---SLERRLKKIER-------SLeEEIDIDPDELEKLYEEAGVFFPDQVKK---RFEEVEAFHKSIVENRR--E 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 629 ELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQND--QKLEKLMVQMKVLSEDKEVLSA---EVKSLYEENNKLSSE 703
Cdd:COG5293 327 YLEEEIAELEAELEELEAELAELGKERAELLSLLDSKGalDKYKELQEELAELEAELEELESrleKLQELEDEIRELKEE 406
|
250 260 270
....*....|....*....|....*....|....*..
gi 966982780 704 KKQLSRDLEVFLSQKndvilKEHITELEKKLQLMVEE 740
Cdd:COG5293 407 RAELKEEIESDIEER-----KELLDEINKLFSEIVEE 438
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1007-1218 |
4.01e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1007 KDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDV------EKERANNFEHHVEDLTRQLRNSTLQCEKINSDNEDLLARI 1080
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAaleefrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1081 ETLQSNAKLLEVQILEVQRAKAMVD-----KELEAEKLQKEQKIKEHATTV----NELEELQVQLQKEKKQLQKTMqELE 1151
Cdd:COG3206 243 AALRAQLGSGPDALPELLQSPVIQQlraqlAELEAELAELSARYTPNHPDVialrAQIAALRAQLQQEAQRILASL-EAE 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1152 LVKKDAQQTTLMNmEIADYERLMKELNQKLSnknnKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQ 1218
Cdd:COG3206 322 LEALQAREASLQA-QLAQLEARLAELPELEA----ELRRLEREVEVARELYESLLQRLEEARLAEAL 383
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
484-741 |
4.13e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 484 ESLREIMEILQtELG-----ESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNHLqgeneKLLSQQELVP 558
Cdd:PRK05771 16 SYKDEVLEALH-ELGvvhieDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKV-----SVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 559 ELENTIKNLEEKngvyllslsqrdtmLKELEAKINSLTEEKDDfINKLKNSYEEMDNFH---KKCEREERLILELGK-KV 634
Cdd:PRK05771 90 DVEEELEKIEKE--------------IKELEEEISELENEIKE-LEQEIERLEPWGNFDldlSLLLGFKYVSVFVGTvPE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 635 EQTTQYNSELEQKVNELTGGLEE-------TLKEKDQNDQK-LEKLMVQMKVLSEDKeVLSAEVKSLYEENNKLSSEKKQ 706
Cdd:PRK05771 155 DKLEELKLESDVENVEYISTDKGyvyvvvvVLKELSDEVEEeLKKLGFERLELEEEG-TPSELIREIKEELEEIEKERES 233
|
250 260 270
....*....|....*....|....*....|....*..
gi 966982780 707 LSRDLEVFLSQKNDVIL--KEHITELEKKLQLMVEER 741
Cdd:PRK05771 234 LLEELKELAKKYLEELLalYEYLEIELERAEALSKFL 270
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
75-355 |
4.51e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.82 E-value: 4.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 75 KALTERLDAILLEKAETEQQclslKKENIKMKQEVEDSVTKMEDAHKELeqshinyvkeiENLKNELMAVRAKYSEDK-- 152
Cdd:PRK11281 59 KLVQQDLEQTLALLDKIDRQ----KEETEQLKQQLAQAPAKLRQAQAEL-----------EALKDDNDEETRETLSTLsl 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 153 ANLQKELEEAMNKQLELSEQLKFQNNSEDNVKKLQEEIEKIRPAFEEQILYLQKQLDATTDEKKETVTQLQNIIEAnSQH 232
Cdd:PRK11281 124 RQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQA-EQA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 233 YQKNINSLQEELL----QLKAIHQEEVKELMCQIEASAKEHE---TEIN-KLNELKENLVKQCEASEKN--IQE----KY 298
Cdd:PRK11281 203 LLNAQNDLQRKSLegntQLQDLLQKQRDYLTARIQRLEHQLQllqEAINsKRLTLSEKTVQEAQSQDEAarIQAnplvAQ 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966982780 299 ECEL-----ENLRKATSNANQdnqmcslLFQENTFVEQVVNekvkHLEDTLKELESQHSILK 355
Cdd:PRK11281 283 ELEInlqlsQRLLKATEKLNT-------LTQQNLRVKNWLD----RLTQSERNIKEQISVLK 333
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
984-1186 |
4.75e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 984 KELDSSRKETQTVREELESL-------------RSEKDQLSA--SMRDLIQAAESYKNLLLEYEKQSEQLDVEKERANNF 1048
Cdd:COG4913 235 DDLERAHEALEDAREQIELLepirelaeryaaaRERLAELEYlrAALRLWFAQRRLELLEAELEELRAELARLEAELERL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1049 EHHVEDLTRQLRNSTLQCEKINSDnedllaRIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNE 1128
Cdd:COG4913 315 EARLDALREELDELEAQIRGNGGD------RLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAE 388
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 966982780 1129 LEELQVQLQKEKKQLQKTMQELELVKKDAQQttlmnmeiaDYERLMKELNQKLSNKNN 1186
Cdd:COG4913 389 AAALLEALEEELEALEEALAEAEAALRDLRR---------ELRELEAEIASLERRKSN 437
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
373-1152 |
5.13e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.64 E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 373 QHIKDEFFHEREDLEFKINELLLAKEEQGCVIEK----LKSELAGLNKQFCCTVEQHNKEVQS---LKEQHQKEISELNE 445
Cdd:pfam15921 77 ERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQsvidLQTKLQEMQMERDAMADIRRRESQSqedLRNQLQNTVHELEA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 446 tflSDSEKEKLtlmfeiqgLKEQCDNLQQEKQEAILNYESLREIMEILqTELGESAGKISQEFESMKQQQASDVHELQQK 525
Cdd:pfam15921 157 ---AKCLKEDM--------LEDSNTQIEQLRKMMLSHEGVLQEIRSIL-VDFEEASGKKIYEHDSMSTMHFRSLGSAISK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 526 -LRTAFTEKDALLETVNHLQGENEKLLSqqelvpelentiknlEEKNGVYLLSLSQRD---TMLKELEAKINSLTEEKDD 601
Cdd:pfam15921 225 iLRELDTEISYLKGRIFPVEDQLEALKS---------------ESQNKIELLLQQHQDrieQLISEHEVEITGLTEKASS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 602 FINKLKNSYEEMDNFHKKCEREERLILelgkkveqttQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVqmkvlse 681
Cdd:pfam15921 290 ARSQANSIQSQLEIIQEQARNQNSMYM----------RQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLV------- 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 682 dkeVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSqknDVILKEHITELEKKLQLMVEERDNLNKL----LENEQVQKLF 757
Cdd:pfam15921 353 ---LANSELTEARTERDQFSQESGNLDDQLQKLLA---DLHKREKELSLEKEQNKRLWDRDTGNSItidhLRRELDDRNM 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 758 VKTQLYGFLKDMGSEVSedGEEKDVVNILQAVSESLAKINEEKCNL--VFQCDKKVFELEKEIKCLQEESVVQCEELKSL 835
Cdd:pfam15921 427 EVQRLEALLKAMKSECQ--GQMERQMAAIQGKNESLEKVSSLTAQLesTKEMLRKVVEELTAKKMTLESSERTVSDLTAS 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 836 LRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTR---LENQNLLIQVEEVSQTCNKNEIHNEKEKCSIKEHENL 912
Cdd:pfam15921 505 LQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRnvqTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRT 584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 913 KPLLE----QKESELRDTRAELILLKDSLAKSPSVQNDLLSSVkeleekleNLEKEGKEKEEKINKIKLVAVK-AKKELD 987
Cdd:pfam15921 585 AGAMQvekaQLEKEINDRRLELQEFKILKDKKDAKIRELEARV--------SDLELEKVKLVNAGSERLRAVKdIKQERD 656
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 988 SSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNlLLEYEKQSEQLDVEKERaNNFEHHVEDLTRQLRNSTLQCE 1067
Cdd:pfam15921 657 QLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTN-KLKMQLKSAQSELEQTR-NTLKSMEGSDGHAMKVAMGMQK 734
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1068 KINSDNedllARIETLQSNAKLLEVQILEVQRAKAMvdkeLEAEKLQKEQKIKEHATTVNELE-ELQVqLQKEKKQLQKT 1146
Cdd:pfam15921 735 QITAKR----GQIDALQSKIQFLEEAMTNANKEKHF----LKEEKNKLSQELSTVATEKNKMAgELEV-LRSQERRLKEK 805
|
....*.
gi 966982780 1147 MQELEL 1152
Cdd:pfam15921 806 VANMEV 811
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
75-901 |
5.48e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 75 KALTERLDAILLEKAETEQQCLSLKK--ENIKMKQEVE--DSVTKMEDAHKELEQSHINYVKEIENLKNELMAVRAKYSE 150
Cdd:PTZ00121 1097 FGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEARkaEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAK 1176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 151 DKANLQKELEEAMNKQLELSEQLKFQNNSE--DNVKKLQE--------EIEKIRPAFEEQilylQKQLDATTDEKKETVT 220
Cdd:PTZ00121 1177 KAEAARKAEEVRKAEELRKAEDARKAEAARkaEEERKAEEarkaedakKAEAVKKAEEAK----KDAEEAKKAEEERNNE 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 221 QLQNIIEANSQHYQKNINSLQEEllqlKAIHQEEVKELMCQIEASAKEHETEINKLNELKENLVKQCEASE-KNIQEKYE 299
Cdd:PTZ00121 1253 EIRKFEEARMAHFARRQAAIKAE----EARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEaKKKAEEAK 1328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 300 CELENLRKATSNANQDNQMCSLLFQENTFVEQVVNEKVKHLEDTLKELESQHSILK---DEVTYMNNLKLKLEMDAQhiK 376
Cdd:PTZ00121 1329 KKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKkkaEEKKKADEAKKKAEEDKK--K 1406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 377 DEFFHEREDLEFKINELLLAKEEQGCVIE-KLKSELAGLNKQFCCTVEQHNKEVQSLKEQHQKEiselnetfLSDSEKEK 455
Cdd:PTZ00121 1407 ADELKKAAAAKKKADEAKKKAEEKKKADEaKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK--------KADEAKKK 1478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 456 LTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDA 535
Cdd:PTZ00121 1479 AEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELK 1558
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 536 LLETVNHLQgENEKLLSQQELVPELENTIKNLEEKNGVYLLSLSQRDTMLKELEAKINSLTEEKDDFINKLKNSYEEMDN 615
Cdd:PTZ00121 1559 KAEEKKKAE-EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQ 1637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 616 FHKKCEREERLILELGKKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLM--------VQMKVLSEDKEVLS 687
Cdd:PTZ00121 1638 LKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKkeaeeakkAEELKKKEAEEKKK 1717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 688 AEVKSLYEENNKLSSE--KKQLSRDLEVFLSQKNDVILKEHITELEKKLQLMVEERDNLNKLLENEQVQKlfvktqlygf 765
Cdd:PTZ00121 1718 AEELKKAEEENKIKAEeaKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE---------- 1787
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 766 lKDMGSEVSEDGEEKDVVNILQAVSESlakinEEKCNLVFQCDKKVFELE-KEIKCLQEESVVQCEELKSLLRDYEQEKV 844
Cdd:PTZ00121 1788 -EDEKRRMEVDKKIKDIFDNFANIIEG-----GKEGNLVINDSKEMEDSAiKEVADSKNMQLEEADAFEKHKFNKNNENG 1861
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 845 LLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCNKNEIHNEK 901
Cdd:PTZ00121 1862 EDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIPNNNMAGKNNDIIDDK 1918
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
132-317 |
5.54e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 5.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 132 KEIENLKNELMAVRAKYsedkANLQKELEEAMNKQLELSEQLKfqnNSEDNVKKLQEEIEKIrpafEEQILYLQKQLD-- 209
Cdd:COG3883 23 KELSELQAELEAAQAEL----DALQAELEELNEEYNELQAELE---ALQAEIDKLQAEIAEA----EAEIEERREELGer 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 210 -ATTDEKKETVTQLQNIIEANS--------------QHYQKNINSLQEELLQLKAIHQEEVKELMCQIEASAKEHETEIN 274
Cdd:COG3883 92 aRALYRSGGSVSYLDVLLGSESfsdfldrlsalskiADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 966982780 275 KLNELK---ENLVKQCEASEKNIQEKYECELENLRKATSNANQDNQ 317
Cdd:COG3883 172 ELEAQQaeqEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1093-1209 |
6.13e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.00 E-value: 6.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1093 QILEVQRAKAMVDKELEAEKL---------QKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTtlm 1163
Cdd:COG2433 380 EALEELIEKELPEEEPEAEREkeheereltEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSE--- 456
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 966982780 1164 nmeiadyERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEI 1209
Cdd:COG2433 457 -------ERREIRKDREISRLDREIERLERELEEERERIEELKRKL 495
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
101-1187 |
6.15e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.58 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 101 ENIKMKQEVEDSVTKMEDAHKELEQSHINYVK----EIENLKNELMAV-----RAKYSEDKANLQKELEEAMNKQLELSE 171
Cdd:TIGR01612 690 DNTEDKAKLDDLKSKIDKEYDKIQNMETATVElhlsNIENKKNELLDIiveikKHIHGEINKDLNKILEDFKNKEKELSN 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 172 QLKFQNNSEDNVKKLQEEIEKIRPAFEEQIL------------YLQ-----KQLDATTDEKKETVTQLQNIIEAN----- 229
Cdd:TIGR01612 770 KINDYAKEKDELNKYKSKISEIKNHYNDQINidnikdedakqnYDKskeyiKTISIKEDEIFKIINEMKFMKDDFlnkvd 849
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 230 -----SQHYQKNINSLQEELLQLKAIHQEEV---------------KELMCQIEASAKEHETEINKLNELKENLvKQCEA 289
Cdd:TIGR01612 850 kfinfENNCKEKIDSEHEQFAELTNKIKAEIsddklndyekkfndsKSLINEINKSIEEEYQNINTLKKVDEYI-KICEN 928
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 290 SEKNIQEKYECELENLRKATSNANQDNQMCSLLFQENTFVEQVVNEKVKHLEDTLKE--LESQHSILKDEVTYMNNLKLK 367
Cdd:TIGR01612 929 TKESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKDasLNDYEAKNNELIKYFNDLKAN 1008
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 368 LEMDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIE-----KLKSELAGLNKQFCCTVEQHNKEVQSLKEQHQKEISE 442
Cdd:TIGR01612 1009 LGKNKENMLYHQFDEKEKATNDIEQKIEDANKNIPNIEiaihtSIYNIIDEIEKEIGKNIELLNKEILEEAEINITNFNE 1088
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 443 LNE-----TFLSDSEKEKLTLMFEIQGLKEQCDNLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFE-SMKQQQA 516
Cdd:TIGR01612 1089 IKEklkhyNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVADkAISNDDP 1168
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 517 SDVHELQQKLRTAFTEKDALLETVNHLQGENEKLLSQQELVPELENTikNLEEKNGVYLLSLSQRD-------TMLKELE 589
Cdd:TIGR01612 1169 EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGI--NLSYGKNLGKLFLEKIDeekkkseHMIKAME 1246
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 590 AKINSLTEEKDDF----------------INKLKNSYEEMDNFHKKCEREERLILELGKKVEQTTQYNSElEQKVNELTG 653
Cdd:TIGR01612 1247 AYIEDLDEIKEKSpeienemgiemdikaeMETFNISHDDDKDHHIISKKHDENISDIREKSLKIIEDFSE-ESDINDIKK 1325
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 654 GLEETLKEKDQNDQKLEKLMVQMK------VLSEDKEVLS--AEVKSLYEENNKlsSEKKQLSRDLEVFLSQKNDVILKE 725
Cdd:TIGR01612 1326 ELQKNLLDAQKHNSDINLYLNEIAniynilKLNKIKKIIDevKEYTKEIEENNK--NIKDELDKSEKLIKKIKDDINLEE 1403
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 726 hiteLEKKLQLMVEERDnLNKLLENEQVQKLFV---KTQLYGFLKDmgSEVSEDGEEKDVVNILQAVSESLAKINEEKCN 802
Cdd:TIGR01612 1404 ----CKSKIESTLDDKD-IDECIKKIKELKNHIlseESNIDTYFKN--ADENNENVLLLFKNIEMADNKSQHILKIKKDN 1476
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 803 LVFQCDKKVFELEKEI------KCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEiqsekealqsdlLEMKNANEKTRL 876
Cdd:TIGR01612 1477 ATNDHDFNINELKEHIdkskgcKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSA------------LAIKNKFAKTKK 1544
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 877 ENQnllIQVEEVSQTCNKNEIHNEKEKCSIKEHENLKPLLEQKESELRDTRAELILLKDSLAkspSVQNDLLssvKELEE 956
Cdd:TIGR01612 1545 DSE---IIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLE---NFENKFL---KISDI 1615
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 957 KLENLEKEGKEKEEKINKIKLVAVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQA---AESYKNLLLEYEK 1033
Cdd:TIGR01612 1616 KKKINDCLKETESIEKKISSFSIDSQDTELKENGDNLNSLQEFLESLKDQKKNIEDKKKELDELdseIEKIEIDVDQHKK 1695
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1034 QSEQLDVEK--ERANNFEHHVEDlTRQLRNSTLQCEKINSDNEDLlariETLQSNAKLLEVQI-LEVQRAKAMVDKELEA 1110
Cdd:TIGR01612 1696 NYEIGIIEKikEIAIANKEEIES-IKELIEPTIENLISSFNTNDL----EGIDPNEKLEEYNTeIGDIYEEFIELYNIIA 1770
|
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1111 EKLQKeqkIKEHATTVNELEELQVQLQKEkkqlqkTMQELELVKKdaQQTTLMNMEIADYERLMKELNQKLSNKNNK 1187
Cdd:TIGR01612 1771 GCLET---VSKEPITYDEIKNTRINAQNE------FLKIIEIEKK--SKSYLDDIEAKEFDRIINHFKKKLDHVNDK 1836
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
213-460 |
6.32e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 213 DEKKETVTQLQN-----IIEANSQ-------HYQKNINSLQEELLQLKAIHQEEVKELMCQIEASAKEHETEINKLNELK 280
Cdd:PRK05771 16 SYKDEVLEALHElgvvhIEDLKEElsnerlrKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 281 ENLVKQCEASEKNIQE------KYECELENLRKaTSNANQDNQmcslLFQENTFVEQVVNEKVKHLEDTLKELESQH--- 351
Cdd:PRK05771 96 EKIEKEIKELEEEISEleneikELEQEIERLEP-WGNFDLDLS----LLLGFKYVSVFVGTVPEDKLEELKLESDVEnve 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 352 --SILKDEVTYM-NNLKLKlemdaqhiKDEFFHEREDLEFKINELL---LAKEeqgcVIEKLKSELAGLNKQfcctVEQH 425
Cdd:PRK05771 171 yiSTDKGYVYVVvVVLKEL--------SDEVEEELKKLGFERLELEeegTPSE----LIREIKEELEEIEKE----RESL 234
|
250 260 270
....*....|....*....|....*....|....*
gi 966982780 426 NKEVQSLKEQHQKEISELNETFLSDSEKEKLTLMF 460
Cdd:PRK05771 235 LEELKELAKKYLEELLALYEYLEIELERAEALSKF 269
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
985-1242 |
6.53e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.96 E-value: 6.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 985 ELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVekeranNFEHHVEDLTRQLRNS-- 1062
Cdd:pfam10174 469 ELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEI------AVEQKKEECSKLENQLkk 542
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1063 TLQCEKINSDNEDLLARIETLQSNAKLLEVqilEVQRAKAMVD------KELEAEKLQKEQKIkehattvNELEELQVQL 1136
Cdd:pfam10174 543 AHNAEEAVRTNPEINDRIRLLEQEVARYKE---ESGKAQAEVErllgilREVENEKNDKDKKI-------AELESLTLRQ 612
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1137 QKE--KKQLQKTMQELELVKKDAQQttlmnmeiaDYERLMKELNQKLSNKNNKIEDLEQEIKIQKQKQETLQEEITSLQS 1214
Cdd:pfam10174 613 MKEqnKKVANIKHGQQEMKKKGAQL---------LEEARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQ 683
|
250 260
....*....|....*....|....*...
gi 966982780 1215 SVQQYEEKNTKIKQLLVKTKKELADSKQ 1242
Cdd:pfam10174 684 SLAEKDGHLTNLRAERRKQLEEILEMKQ 711
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
522-770 |
6.72e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.77 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 522 LQQKLRTAFTEKDALLETVNHLQgenEKLLSQQELVPELENTIK-NLEEKNGVY---LLSLSQRDTMLKELEAKINSLTE 597
Cdd:PHA02562 172 NKDKIRELNQQIQTLDMKIDHIQ---QQIKTYNKNIEEQRKKNGeNIARKQNKYdelVEEAKTIKAEIEELTDELLNLVM 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 598 EKDDF---INKLKNSYEEMDNFHKKCEREERLILELG------KKVEQTTQYNSELEQKVNELTGGLEETLKEKDQNDQK 668
Cdd:PHA02562 249 DIEDPsaaLNKLNTAAAKIKSKIEQFQKVIKMYEKGGvcptctQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEI 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 669 LEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRdlevflSQKNDVILKEHITELEKKLQLMVEERDNLnkll 748
Cdd:PHA02562 329 MDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEE------LQAEFVDNAEELAKLQDELDKIVKTKSEL---- 398
|
250 260
....*....|....*....|..
gi 966982780 749 eneqVQKLFVKTQLYGFLKDMG 770
Cdd:PHA02562 399 ----VKEKYHRGIVTDLLKDSG 416
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
960-1187 |
7.95e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 7.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 960 NLEKEGKekeekinkiklvavKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLD 1039
Cdd:COG4942 31 QLQQEIA--------------ELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1040 VE-KERANNFEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAmvdkELEAEKLQKEQK 1118
Cdd:COG4942 97 AElEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA----ELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1119 IKEHATTVNELEELQVQLQKEKKQLQKTMQELEL-VKKDAQQTTLMNMEIADYERLMKELNQKLSNKNNK 1187
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKeLAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
130-308 |
8.41e-03 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 40.29 E-value: 8.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 130 YVKEIENLKNELMAVRAkyseDKANLQKELEEAmnkqLELSEQLKfqnnsednvKKLQEEIEKiRPAFEEQILYLQKQLD 209
Cdd:pfam00038 52 YEKEIEDLRRQLDTLTV----ERARLQLELDNL----RLAAEDFR---------QKYEDELNL-RTSAENDLVGLRKDLD 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 210 ATTDEKketvTQLQNIIEansqhyqkninSLQEELLQLKAIHQEEVKELMCQIEASAKEHETEINK-------LNELKEN 282
Cdd:pfam00038 114 EATLAR----VDLEAKIE-----------SLKEELAFLKKNHEEEVRELQAQVSDTQVNVEMDAARkldltsaLAEIRAQ 178
|
170 180
....*....|....*....|....*.
gi 966982780 283 LVKQCEASEKNIQEKYECELENLRKA 308
Cdd:pfam00038 179 YEEIAAKNREEAEEWYQSKLEELQQA 204
|
|
| DUF4407 |
pfam14362 |
Domain of unknown function (DUF4407); This family of proteins is found in bacteria. Proteins ... |
990-1084 |
8.90e-03 |
|
Domain of unknown function (DUF4407); This family of proteins is found in bacteria. Proteins in this family are typically between 366 and 597 amino acids in length. There is a single completely conserved residue R that may be functionally important.
Pssm-ID: 464151 [Multi-domain] Cd Length: 295 Bit Score: 39.93 E-value: 8.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 990 RKETQTVREELESLRSEKDQLSASMRDLIQAA------------------ESYKNLLLEYEKQSEQLDVEKERAN----N 1047
Cdd:pfam14362 132 RARLAELEAQIAALDAEIDAAEARLDALQAEArceldgtpgtgtgvpgdgPVAKTKQAQLDAAQAELAALQAQNDarlaA 211
|
90 100 110
....*....|....*....|....*....|....*..
gi 966982780 1048 FEHHVEDLTRQLRNSTLQCEKINSDNEDLLARIETLQ 1084
Cdd:pfam14362 212 LRAELARLTAERAAARARSQAAIDGDDGLLARLEALN 248
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
984-1321 |
9.18e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 40.61 E-value: 9.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 984 KELDSSRKETQTVREELESLrseKDQLSASMRDLIQAAESYKNLLLEYEKQseqlDVEKERANNFEhhVEDLTRQLRNST 1063
Cdd:PLN03229 422 KKREAVKTPVRELEGEVEKL---KEQILKAKESSSKPSELALNEMIEKLKK----EIDLEYTEAVI--AMGLQERLENLR 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1064 LQCEKINSDNE----DLLARIETLQSNAKL------------LEVQIL-EVQRAKAMVDKELEAEKLQKE--QKIKEhAT 1124
Cdd:PLN03229 493 EEFSKANSQDQlmhpVLMEKIEKLKDEFNKrlsrapnylslkYKLDMLnEFSRAKALSEKKSKAEKLKAEinKKFKE-VM 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1125 TVNELEElQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEI-ADYERLMKELNQKLSNKNNKIEDLEQEIKIQ--KQK 1201
Cdd:PLN03229 572 DRPEIKE-KMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIeLELAGVLKSMGLEVIGVTKKNKDTAEQTPPPnlQEK 650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1202 QETLQEEITSLQSSVQQYEEKNTKIKQLlvktKKELADSKQAEtdhlilQASLKGELEASQQQVEvYKIQLAEITSEKHK 1281
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSKIELL----KLEVAKASKTP------DVTEKEKIEALEQQIK-QKIAEALNSSELKE 719
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 966982780 1282 IHEHLKTSAEQHQRTLSAYRQRVTALQEESRAAKAEQATV 1321
Cdd:PLN03229 720 KFEELEAELAAARETAAESNGSLKNDDDKEEDSKEDGSRV 759
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1187-1422 |
9.47e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 9.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1187 KIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELAdskqaetdhlilqaSLKGELEASQQQVE 1266
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEID--------------KLQAEIAEAEAEIE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1267 VYKIQLAEitsekhkihehlktsaeqhqrtlsayrqRVTALQEESRAAKAEQATVTSE-FESYKVRVHNVLKQQKNKSMS 1345
Cdd:COG3883 83 ERREELGE----------------------------RARALYRSGGSVSYLDVLLGSEsFSDFLDRLSALSKIADADADL 134
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966982780 1346 QAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQMNVSELQTLQSEHDTLLERHNKMLQETVSKEAELREKLCSIQSE 1422
Cdd:COG3883 135 LEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAA 211
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
977-1145 |
1.00e-02 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 1.00e-02
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 977 LVAVKAKKELDSSRKETQTVREELESLRSEKDQLSASMRDLIQAAESYKNLLLEYEKQSEQLDVEKerannfehhVEDLT 1056
Cdd:COG4913 274 LEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDR---------LEQLE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966982780 1057 RQLRNSTLQCEKINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQL 1136
Cdd:COG4913 345 REIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELREL 424
|
....*....
gi 966982780 1137 QKEKKQLQK 1145
Cdd:COG4913 425 EAEIASLER 433
|
|
| |
