|
Name |
Accession |
Description |
Interval |
E-value |
| ORC4_C |
pfam14629 |
Origin recognition complex (ORC) subunit 4 C-terminus; This entry represents the C-terminus of ... |
228-415 |
5.48e-61 |
|
Origin recognition complex (ORC) subunit 4 C-terminus; This entry represents the C-terminus of origin recognition complex subunit 4.
Pssm-ID: 464223 Cd Length: 212 Bit Score: 197.18 E-value: 5.48e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 228 KIFKEQLSLPAEF----PDKLFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLTLNRVTASHPFMTAIDLM 303
Cdd:pfam14629 1 EICKSLLSLPSDEssseGDKKFLEQWNASIEELLEDSTVQDILKRLYYTTKSVRSLLNSLILPVSKLSPDSPLLTAESLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 304 EASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK-------------AHSVYNFEKP 370
Cdd:pfam14629 81 SALSSQSPDSKLSLLRSLSVLELCLLIAAARLSEIYDTDTFNFEMVYDEYKKLAKRSkvspssatsqssaASGIRVWGRP 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 966976274 371 VVMKAFEHLQQLELIKPMERTSGNS-------QREYQLMKLLLDNTQIMNAL 415
Cdd:pfam14629 161 VALKAWEHLLSLELLVPVGAVSTGGassgsggGKEFRMVRLDITLEEIREAV 212
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
43-226 |
9.01e-19 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 87.60 E-value: 9.01e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 43 QYKHISELLkRTALHGES-NSVLIIGPRGSGKTMLINHALKELMEI-EEVSENVLQVHLNglLQINDKI--ALKEITRQL 118
Cdd:COG1474 34 EIEELASAL-RPALRGERpSNVLIYGPTGTGKTAVAKYVLEELEEEaEERGVDVRVVYVN--CRQASTRyrVLSRILEEL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 119 NLENVVGDKvfG-SFAENLSFLLEALKKGDRtsscPVIFILDEFDLFAHHKNQTLLYNLFDISQS-AQTPIAVIGLTCRL 196
Cdd:COG1474 111 GSGEDIPST--GlSTDELFDRLYEALDERDG----VLVVVLDEIDYLVDDEGDDLLYQLLRANEElEGARVGVIGISNDL 184
|
170 180 190
....*....|....*....|....*....|
gi 966976274 197 DILELLEKRVKSRFSHRQIHlmnsfgFPQY 226
Cdd:COG1474 185 EFLENLDPRVKSSLGEEEIV------FPPY 208
|
|
| TIGR02928 |
TIGR02928 |
orc1/cdc6 family replication initiation protein; Members of this protein family are found ... |
45-226 |
1.69e-15 |
|
orc1/cdc6 family replication initiation protein; Members of this protein family are found exclusively in the archaea. This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. Several members may be found in genome and interact with each other. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 274354 [Multi-domain] Cd Length: 365 Bit Score: 77.67 E-value: 1.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 45 KHISELLK--RTALHGE-SNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHlngllQINDKI------ALKEIT 115
Cdd:TIGR02928 22 EQIEELAKalRPILRGSrPSNVFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRVVTV-----YVNCQIldtlyqVLVELA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 116 RQLNlenVVGDKV--FG-SFAENLSFLLEALKKGDRTsscpVIFILDEFDLFAHHKNqTLLYNLFDISQSAQT---PIAV 189
Cdd:TIGR02928 97 NQLR---GSGEEVptTGlSTSEVFRRLYKELNERGDS----LIIVLDEIDYLVGDDD-DLLYQLSRARSNGDLdnaKVGV 168
|
170 180 190
....*....|....*....|....*....|....*..
gi 966976274 190 IGLTCRLDILELLEKRVKSRFSHRQIHlmnsfgFPQY 226
Cdd:TIGR02928 169 IGISNDLKFRENLDPRVKSSLCEEEII------FPPY 199
|
|
| cdc6 |
PRK00411 |
ORC1-type DNA replication protein; |
53-226 |
9.70e-13 |
|
ORC1-type DNA replication protein;
Pssm-ID: 234751 [Multi-domain] Cd Length: 394 Bit Score: 69.49 E-value: 9.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 53 RTALHGESNS-VLIIGPRGSGKTMLInhaLKELMEIEEVSENVLQVHLNGllQIND---KIaLKEITRQLNLENV--VG- 125
Cdd:PRK00411 47 RPALRGSRPLnVLIYGPPGTGKTTTV---KKVFEELEEIAVKVVYVYINC--QIDRtryAI-FSEIARQLFGHPPpsSGl 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 126 --DKVFGSFAEnlsflleALKKGDRTsscpVIFILDEFD-LFAHHKNQTLlYNLFDISQSAQ-TPIAVIGLTCRLDILEL 201
Cdd:PRK00411 121 sfDELFDKIAE-------YLDERDRV----LIVALDDINyLFEKEGNDVL-YSLLRAHEEYPgARIGVIGISSDLTFLYI 188
|
170 180
....*....|....*....|....*
gi 966976274 202 LEKRVKSRFSHRQIHlmnsfgFPQY 226
Cdd:PRK00411 189 LDPRVKSVFRPEEIY------FPPY 207
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
46-213 |
4.07e-09 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 55.23 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 46 HISELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELmeiEEVSENVLQVHLNGLLQINdkialkeitrqlnlenvVG 125
Cdd:cd00009 5 EAIEALREALELPPPKNLLLYGPPGTGKTTLARAIANEL---FRPGAPFLYLNASDLLEGL-----------------VV 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 126 DKVFGSFAENLSFLLEALKKGDrtsscpvIFILDEFDLFAHHKNQTLLYNL--FDISQSAQTPIAVIGLTCRLDILELLE 203
Cdd:cd00009 65 AELFGHFLVRLLFELAEKAKPG-------VLFIDEIDSLSRGAQNALLRVLetLNDLRIDRENVRVIGATNRPLLGDLDR 137
|
170
....*....|
gi 966976274 204 KRvKSRFSHR 213
Cdd:cd00009 138 AL-YDRLDIR 146
|
|
| AAA_16 |
pfam13191 |
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ... |
36-190 |
1.31e-07 |
|
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.
Pssm-ID: 433025 [Multi-domain] Cd Length: 167 Bit Score: 50.97 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 36 NLFGVQVQYKHISELLKRTAlHGESNSVLIIGPRGSGKTMLINHALKELmeiEEVSENVLQ---VHLNGLLQINDKIALK 112
Cdd:pfam13191 1 RLVGREEELEQLLDALDRVR-SGRPPSVLLTGEAGTGKTTLLRELLRAL---ERDGGYFLRgkcDENLPYSPLLEALTRE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 113 EITRQLNLENVV----------------GDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHkNQTLLYNL 176
Cdd:pfam13191 77 GLLRQLLDELESslleawraallealapVPELPGDLAERLLDLLLRLLDLLARGERPLVLVLDDLQWADEA-SLQLLAAL 155
|
170
....*....|....
gi 966976274 177 FDISQsaQTPIAVI 190
Cdd:pfam13191 156 LRLLE--SLPLLVV 167
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
61-217 |
2.50e-07 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 50.06 E-value: 2.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 61 NSVLIIGPRGSGKTMLINHALKElmeieevsenvLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLL 140
Cdd:smart00382 3 EVILIVGPPGSGKTTLARALARE-----------LGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLAL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 141 EALKKgdrtsSCPVIFILDEFDLFAHHKNQTLL----YNLFDISQSAQTPIAVIGLTcrLDILELLEKRVKSRFSHRQIH 216
Cdd:smart00382 72 ALARK-----LKPDVLILDEITSLLDAEQEALLllleELRLLLLLKSEKNLTVILTT--NDEKDLGPALLRRRFDRRIVL 144
|
.
gi 966976274 217 L 217
Cdd:smart00382 145 L 145
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ORC4_C |
pfam14629 |
Origin recognition complex (ORC) subunit 4 C-terminus; This entry represents the C-terminus of ... |
228-415 |
5.48e-61 |
|
Origin recognition complex (ORC) subunit 4 C-terminus; This entry represents the C-terminus of origin recognition complex subunit 4.
Pssm-ID: 464223 Cd Length: 212 Bit Score: 197.18 E-value: 5.48e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 228 KIFKEQLSLPAEF----PDKLFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLTLNRVTASHPFMTAIDLM 303
Cdd:pfam14629 1 EICKSLLSLPSDEssseGDKKFLEQWNASIEELLEDSTVQDILKRLYYTTKSVRSLLNSLILPVSKLSPDSPLLTAESLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 304 EASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK-------------AHSVYNFEKP 370
Cdd:pfam14629 81 SALSSQSPDSKLSLLRSLSVLELCLLIAAARLSEIYDTDTFNFEMVYDEYKKLAKRSkvspssatsqssaASGIRVWGRP 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 966976274 371 VVMKAFEHLQQLELIKPMERTSGNS-------QREYQLMKLLLDNTQIMNAL 415
Cdd:pfam14629 161 VALKAWEHLLSLELLVPVGAVSTGGassgsggGKEFRMVRLDITLEEIREAV 212
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
43-226 |
9.01e-19 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 87.60 E-value: 9.01e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 43 QYKHISELLkRTALHGES-NSVLIIGPRGSGKTMLINHALKELMEI-EEVSENVLQVHLNglLQINDKI--ALKEITRQL 118
Cdd:COG1474 34 EIEELASAL-RPALRGERpSNVLIYGPTGTGKTAVAKYVLEELEEEaEERGVDVRVVYVN--CRQASTRyrVLSRILEEL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 119 NLENVVGDKvfG-SFAENLSFLLEALKKGDRtsscPVIFILDEFDLFAHHKNQTLLYNLFDISQS-AQTPIAVIGLTCRL 196
Cdd:COG1474 111 GSGEDIPST--GlSTDELFDRLYEALDERDG----VLVVVLDEIDYLVDDEGDDLLYQLLRANEElEGARVGVIGISNDL 184
|
170 180 190
....*....|....*....|....*....|
gi 966976274 197 DILELLEKRVKSRFSHRQIHlmnsfgFPQY 226
Cdd:COG1474 185 EFLENLDPRVKSSLGEEEIV------FPPY 208
|
|
| TIGR02928 |
TIGR02928 |
orc1/cdc6 family replication initiation protein; Members of this protein family are found ... |
45-226 |
1.69e-15 |
|
orc1/cdc6 family replication initiation protein; Members of this protein family are found exclusively in the archaea. This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. Several members may be found in genome and interact with each other. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 274354 [Multi-domain] Cd Length: 365 Bit Score: 77.67 E-value: 1.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 45 KHISELLK--RTALHGE-SNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHlngllQINDKI------ALKEIT 115
Cdd:TIGR02928 22 EQIEELAKalRPILRGSrPSNVFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRVVTV-----YVNCQIldtlyqVLVELA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 116 RQLNlenVVGDKV--FG-SFAENLSFLLEALKKGDRTsscpVIFILDEFDLFAHHKNqTLLYNLFDISQSAQT---PIAV 189
Cdd:TIGR02928 97 NQLR---GSGEEVptTGlSTSEVFRRLYKELNERGDS----LIIVLDEIDYLVGDDD-DLLYQLSRARSNGDLdnaKVGV 168
|
170 180 190
....*....|....*....|....*....|....*..
gi 966976274 190 IGLTCRLDILELLEKRVKSRFSHRQIHlmnsfgFPQY 226
Cdd:TIGR02928 169 IGISNDLKFRENLDPRVKSSLCEEEII------FPPY 199
|
|
| cdc6 |
PRK00411 |
ORC1-type DNA replication protein; |
53-226 |
9.70e-13 |
|
ORC1-type DNA replication protein;
Pssm-ID: 234751 [Multi-domain] Cd Length: 394 Bit Score: 69.49 E-value: 9.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 53 RTALHGESNS-VLIIGPRGSGKTMLInhaLKELMEIEEVSENVLQVHLNGllQIND---KIaLKEITRQLNLENV--VG- 125
Cdd:PRK00411 47 RPALRGSRPLnVLIYGPPGTGKTTTV---KKVFEELEEIAVKVVYVYINC--QIDRtryAI-FSEIARQLFGHPPpsSGl 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 126 --DKVFGSFAEnlsflleALKKGDRTsscpVIFILDEFD-LFAHHKNQTLlYNLFDISQSAQ-TPIAVIGLTCRLDILEL 201
Cdd:PRK00411 121 sfDELFDKIAE-------YLDERDRV----LIVALDDINyLFEKEGNDVL-YSLLRAHEEYPgARIGVIGISSDLTFLYI 188
|
170 180
....*....|....*....|....*
gi 966976274 202 LEKRVKSRFSHRQIHlmnsfgFPQY 226
Cdd:PRK00411 189 LDPRVKSVFRPEEIY------FPPY 207
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
46-213 |
4.07e-09 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 55.23 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 46 HISELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELmeiEEVSENVLQVHLNGLLQINdkialkeitrqlnlenvVG 125
Cdd:cd00009 5 EAIEALREALELPPPKNLLLYGPPGTGKTTLARAIANEL---FRPGAPFLYLNASDLLEGL-----------------VV 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 126 DKVFGSFAENLSFLLEALKKGDrtsscpvIFILDEFDLFAHHKNQTLLYNL--FDISQSAQTPIAVIGLTCRLDILELLE 203
Cdd:cd00009 65 AELFGHFLVRLLFELAEKAKPG-------VLFIDEIDSLSRGAQNALLRVLetLNDLRIDRENVRVIGATNRPLLGDLDR 137
|
170
....*....|
gi 966976274 204 KRvKSRFSHR 213
Cdd:cd00009 138 AL-YDRLDIR 146
|
|
| AAA_16 |
pfam13191 |
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ... |
36-190 |
1.31e-07 |
|
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.
Pssm-ID: 433025 [Multi-domain] Cd Length: 167 Bit Score: 50.97 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 36 NLFGVQVQYKHISELLKRTAlHGESNSVLIIGPRGSGKTMLINHALKELmeiEEVSENVLQ---VHLNGLLQINDKIALK 112
Cdd:pfam13191 1 RLVGREEELEQLLDALDRVR-SGRPPSVLLTGEAGTGKTTLLRELLRAL---ERDGGYFLRgkcDENLPYSPLLEALTRE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 113 EITRQLNLENVV----------------GDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHkNQTLLYNL 176
Cdd:pfam13191 77 GLLRQLLDELESslleawraallealapVPELPGDLAERLLDLLLRLLDLLARGERPLVLVLDDLQWADEA-SLQLLAAL 155
|
170
....*....|....
gi 966976274 177 FDISQsaQTPIAVI 190
Cdd:pfam13191 156 LRLLE--SLPLLVV 167
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
61-217 |
2.50e-07 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 50.06 E-value: 2.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 61 NSVLIIGPRGSGKTMLINHALKElmeieevsenvLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLL 140
Cdd:smart00382 3 EVILIVGPPGSGKTTLARALARE-----------LGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLAL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 141 EALKKgdrtsSCPVIFILDEFDLFAHHKNQTLL----YNLFDISQSAQTPIAVIGLTcrLDILELLEKRVKSRFSHRQIH 216
Cdd:smart00382 72 ALARK-----LKPDVLILDEITSLLDAEQEALLllleELRLLLLLKSEKNLTVILTT--NDEKDLGPALLRRRFDRRIVL 144
|
.
gi 966976274 217 L 217
Cdd:smart00382 145 L 145
|
|
| NACHT |
COG5635 |
Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; |
45-285 |
1.40e-06 |
|
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
Pssm-ID: 444362 [Multi-domain] Cd Length: 935 Bit Score: 50.96 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 45 KHISELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNgllqindkiaLKEITRQLNLENVV 124
Cdd:COG5635 165 ERIESLKRLELLEAKKKRLLILGEPGSGKTTLLRYLALELAERYLDAEDPIPILIE----------LRDLAEEASLEDLL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 125 GDKVFGSFAENLSFLLEALKKGdrtsscPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIgLTCR--------- 195
Cdd:COG5635 235 AEALEKRGGEPEDALERLLRNG------RLLLLLDGLDEVPDEADRDEVLNQLRRFLERYPKARVI-ITSRpegydssel 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 196 --LDILELLEkrvksrFSHRQIhlmnsfgfpqyvkifkeqlslpaefpdKLFAEKWNENVQYLSEDrsVQEVLQKHFNIS 273
Cdd:COG5635 308 egFEVLELAP------LSDEQI---------------------------EEFLKKWFEATERKAER--LLEALEENPELR 352
|
250
....*....|....*
gi 966976274 274 KNLRS---LHMLLML 285
Cdd:COG5635 353 ELARNpllLTLLALL 367
|
|
| COG1672 |
COG1672 |
Predicted ATPase, archaeal AAA+ ATPase superfamily [General function prediction only]; |
45-161 |
8.46e-06 |
|
Predicted ATPase, archaeal AAA+ ATPase superfamily [General function prediction only];
Pssm-ID: 441278 [Multi-domain] Cd Length: 324 Bit Score: 47.60 E-value: 8.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 45 KHISELLKRTALHGESNsVLIIGPRGSGKTMLINHALKElmeieevsENVlqVHLNgLLQINDKIALKEITRQLN--LEN 122
Cdd:COG1672 7 EELEELEKLYESDGGEL-VVVYGRRRVGKTSLIKEFLKE--------KPA--IYFD-AREESERESLRDFSEALAeaLGD 74
|
90 100 110
....*....|....*....|....*....|....*....
gi 966976274 123 VVGDKVFGSFAENLSFLLEALKKGdrtsscPVIFILDEF 161
Cdd:COG1672 75 PLSKKEFESWEEAFEYLAELAEGK------RLVIVIDEF 107
|
|
| AAA |
pfam00004 |
ATPase family associated with various cellular activities (AAA); AAA family proteins often ... |
63-214 |
1.01e-05 |
|
ATPase family associated with various cellular activities (AAA); AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Pssm-ID: 459627 [Multi-domain] Cd Length: 130 Bit Score: 44.89 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 63 VLIIGPRGSGKTMLInHALkelmeIEEVSENVLQVHLNGLLqindkialkeitrqlnlenvvgDKVFGSFAENLSFLLEA 142
Cdd:pfam00004 1 LLLYGPPGTGKTTLA-KAV-----AKELGAPFIEISGSELV----------------------SKYVGESEKRLRELFEA 52
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 143 LKKgdrtSSCPVIFIlDEFDLFAHHKN----------QTLLYNLFDISQSAQTPIAVIGLTCRLDileLLEKRVKSRFSH 212
Cdd:pfam00004 53 AKK----LAPCVIFI-DEIDALAGSRGsggdsesrrvVNQLLTELDGFTSSNSKVIVIAATNRPD---KLDPALLGRFDR 124
|
..
gi 966976274 213 RQ 214
Cdd:pfam00004 125 II 126
|
|
| AAA_22 |
pfam13401 |
AAA domain; |
56-190 |
3.23e-04 |
|
AAA domain;
Pssm-ID: 379165 [Multi-domain] Cd Length: 129 Bit Score: 40.40 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 56 LHGESNSVLIIGPRGSGKTMLINHALKELmeiEEVSENVLQV---HLNGLLQIndkiaLKEITRQLNLEnvvgdkvfGSF 132
Cdd:pfam13401 1 IRFGAGILVLTGESGTGKTTLLRRLLEQL---PEVRDSVVFVdlpSGTSPKDL-----LRALLRALGLP--------LSG 64
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 966976274 133 AENLSFLLEALKKGDRTSSCPVIFILDEfdlfAHHKNQTLLYNLFDISQSAQTPIAVI 190
Cdd:pfam13401 65 RLSKEELLAALQQLLLALAVAVVLIIDE----AQHLSLEALEELRDLLNLSSKLLQLI 118
|
|
| PTZ00112 |
PTZ00112 |
origin recognition complex 1 protein; Provisional |
60-277 |
2.19e-03 |
|
origin recognition complex 1 protein; Provisional
Pssm-ID: 240274 [Multi-domain] Cd Length: 1164 Bit Score: 40.36 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 60 SNSVLII-GPRGSGKTMLInHALKELMEIEEVSE-----NVLQVhlNGLLQINDKIALKEITRQLNleNVVGDKVFGSFa 133
Cdd:PTZ00112 780 SNQILYIsGMPGTGKTATV-YSVIQLLQHKTKQKllpsfNVFEI--NGMNVVHPNAAYQVLYKQLF--NKKPPNALNSF- 853
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 134 ENLSFLLEALKKGDRTSScpvIFILDEFDlFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHR 213
Cdd:PTZ00112 854 KILDRLFNQNKKDNRNVS---ILIIDEID-YLITKTQKVLFTLFDWPTKINSKLVLIAISNTMDLPERLIPRCRSRLAFG 929
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966976274 214 QIhLMNSFGFPQYVKIFKEQLslpaefpdklfaekwnENVQYLSEDRSVQEVLQKHFNISKNLR 277
Cdd:PTZ00112 930 RL-VFSPYKGDEIEKIIKERL----------------ENCKEIIDHTAIQLCARKVANVSGDIR 976
|
|
| ATPase_2 |
pfam01637 |
ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is ... |
45-258 |
3.36e-03 |
|
ATPase domain predominantly from Archaea; This family contain a conserved P-loop motif that is involved in binding ATP. There are eukaryote members as well as archaeal members in this family.
Pssm-ID: 376582 [Multi-domain] Cd Length: 222 Bit Score: 38.84 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 45 KHISELLKRtaLHGESNSVLII-GPRGSGKTMLINHALKELMEIEE--VSENVLQvhlngllqiNDKIALKEITRQLN-L 120
Cdd:pfam01637 6 KELKELEEW--AERGPNLIYVIyGPEGCGKTALLRESIENLLDLGYyvIYYDPLR---------RYFISKLDRFEEVRrL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966976274 121 ENVVGDKVFGSFAE-------NLSFLLEALKKGDRTsscPVIFILDEFDLFAHHKNQTL---LYNLFDISQSAQTPIAVI 190
Cdd:pfam01637 75 AEALGIAVPKAELEesklaflAIELLLEALKRRGKK---IAIIIDEVQQAIGLNGAELLvkeLLNLIEYLTKEYHLCHVI 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 966976274 191 GLTCRLDILELLEKRVKSRFSHRQIHLMnSFGFPQYVKIFKEQLSLPAEFPDKLFAEKWNE---NVQYLSE 258
Cdd:pfam01637 152 CLSSEGLFIELVYYKSPLIGRHRWALVD-PLDKETAWNFLKEGFKELYELSKEDFEEIWRYtggNPKYLEE 221
|
|
| AAA_19 |
pfam13245 |
AAA domain; |
53-101 |
5.41e-03 |
|
AAA domain;
Pssm-ID: 433059 [Multi-domain] Cd Length: 136 Bit Score: 37.20 E-value: 5.41e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 966976274 53 RTALHgESNSVLIIGPrGSGKTMLINHALKELMEIEEVSENVLQVHLNG 101
Cdd:pfam13245 6 RTALP-SKVVLLTGGP-GTGKTTTIRHIVALLVALGGVSFPILLAAPTG 52
|
|
| |
