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Conserved domains on  [gi|767935784|ref|XP_011541652|]
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sorting nexin-24 isoform X3 [Homo sapiens]

Protein Classification

PX domain-containing protein; PX and BAR domain-containing protein( domain architecture ID 10160756)

PX (Phox Homology) domain-containing protein may bind phosphoinositides and may function in targeting proteins to membranes| PX (Phox homology) and BAR (Bin/Amphiphysin/Rvs) domain-containing protein similar to Saccoglossus kowalevskii sorting nexin 2

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PX_SNX22 cd06880
The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a ...
1-144 2.45e-58

The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.


:

Pssm-ID: 132790  Cd Length: 110  Bit Score: 179.01  E-value: 2.45e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784   1 MEVYIPSFRYEESDLERGYTvvivwhrafqtkmesyevivleiafsngrltyqVFKIEVLMNGRKHFVEKRYSEFHALHK 80
Cdd:cd06880    1 IEVSIPSYRLEVDESEKPYT---------------------------------VFTIEVLVNGRRHTVEKRYSEFHALHK 47
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767935784  81 KLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENeELPKLFLDFLNVRHLPSLPKA 144
Cdd:cd06880   48 KLKKSIKTPDFPPKRVRNWNPKVLEQRRQGLEAYLQGLLKIN-ELPKQLLDFLGVRHFPSLPKS 110
 
Name Accession Description Interval E-value
PX_SNX22 cd06880
The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a ...
1-144 2.45e-58

The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.


Pssm-ID: 132790  Cd Length: 110  Bit Score: 179.01  E-value: 2.45e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784   1 MEVYIPSFRYEESDLERGYTvvivwhrafqtkmesyevivleiafsngrltyqVFKIEVLMNGRKHFVEKRYSEFHALHK 80
Cdd:cd06880    1 IEVSIPSYRLEVDESEKPYT---------------------------------VFTIEVLVNGRRHTVEKRYSEFHALHK 47
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767935784  81 KLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENeELPKLFLDFLNVRHLPSLPKA 144
Cdd:cd06880   48 KLKKSIKTPDFPPKRVRNWNPKVLEQRRQGLEAYLQGLLKIN-ELPKQLLDFLGVRHFPSLPKS 110
PX pfam00787
PX domain; PX domains bind to phosphoinositides.
58-136 2.10e-15

PX domain; PX domains bind to phosphoinositides.


Pssm-ID: 459940  Cd Length: 84  Bit Score: 68.42  E-value: 2.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784   58 EVLMNGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSK-HVRNWVPKVLEQRRQGLETYLQAVILENE-ELPKLFLDF 132
Cdd:pfam00787   1 LPTFSLEEWSVRRRYSDFVELHKKLLRKFPSviiPPLPPKrWLGRYNEEFIEKRRKGLEQYLQRLLQHPElRNSEVLLEF 80

                  ....
gi 767935784  133 LNVR 136
Cdd:pfam00787  81 LESD 84
PX smart00312
PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function ...
39-134 8.63e-14

PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.


Pssm-ID: 214610  Cd Length: 105  Bit Score: 64.67  E-value: 8.63e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784    39 IVLEIAFSNGRLTYQVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSKHV----RNWVPKVLEQRRQGL 111
Cdd:smart00312   1 VVEPEKIGDGKHYYYVIEIETKTGLEEWTVSRRYSDFLELHSKLKKHFPRsilPPLPGKKLfgrlNNFSEEFIEKRRRGL 80
                           90       100
                   ....*....|....*....|....*.
gi 767935784   112 ETYLQAvILENEELP---KLFLDFLN 134
Cdd:smart00312  81 EKYLQS-LLNHPELInhsEVVLEFLE 105
COG5391 COG5391
Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function ...
62-160 1.73e-09

Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only];


Pssm-ID: 227680 [Multi-domain]  Cd Length: 524  Bit Score: 56.34  E-value: 1.73e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  62 NGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSKHV------RNWVPKVLEQRRQGLETYLQAVILENeELPKLFL-- 130
Cdd:COG5391  169 ESRPLVVRRRYSDFESLHSILIKLLPLcaiPPLPSKKSnseyygDRFSDEFIEERRQSLQNFLRRVSTHP-LLSNYKNsk 247
                         90       100       110
                 ....*....|....*....|....*....|
gi 767935784 131 DFLNVRHLPSLPKAEScGSFDETESEESSK 160
Cdd:COG5391  248 SWESHSTLLSSFIENR-KSVPTPLSLDLTS 276
 
Name Accession Description Interval E-value
PX_SNX22 cd06880
The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a ...
1-144 2.45e-58

The phosphoinositide binding Phox Homology domain of Sorting Nexin 22; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX22 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. The biological function of SNX22 is not yet known.


Pssm-ID: 132790  Cd Length: 110  Bit Score: 179.01  E-value: 2.45e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784   1 MEVYIPSFRYEESDLERGYTvvivwhrafqtkmesyevivleiafsngrltyqVFKIEVLMNGRKHFVEKRYSEFHALHK 80
Cdd:cd06880    1 IEVSIPSYRLEVDESEKPYT---------------------------------VFTIEVLVNGRRHTVEKRYSEFHALHK 47
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767935784  81 KLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENeELPKLFLDFLNVRHLPSLPKA 144
Cdd:cd06880   48 KLKKSIKTPDFPPKRVRNWNPKVLEQRRQGLEAYLQGLLKIN-ELPKQLLDFLGVRHFPSLPKS 110
PX_domain cd06093
The Phox Homology domain, a phosphoinositide binding module; The PX domain is a ...
51-133 7.35e-16

The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases, other PIs such as PI4P or PI(3,4)P2, among others, are the preferred substrates. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction, as in the cases of p40phox, p47phox, and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs, which play important roles in endosomal sorting.


Pssm-ID: 132768 [Multi-domain]  Cd Length: 106  Bit Score: 70.08  E-value: 7.35e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  51 TYQVFKIEV-LMNGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSKH-VRNWVPKVLEQRRQGLETYLQAvILENEEL 125
Cdd:cd06093   16 KYVVYIIEVtTQGGEEWTVYRRYSDFEELHEKLKKKFPGvilPPLPPKKlFGNLDPEFIEERRKQLEQYLQS-LLNHPEL 94
                         90
                 ....*....|
gi 767935784 126 --PKLFLDFL 133
Cdd:cd06093   95 rnSEELKEFL 104
PX_SNARE cd06897
The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; The PX domain ...
51-136 1.50e-15

The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of fungal proteins similar to Saccharomyces cerevisiae Vam7p. They contain an N-terminal PX domain and a C-terminal SNARE domain. The SNARE (Soluble NSF attachment protein receptor) family of proteins are integral membrane proteins that serve as key factors for vesicular trafficking. Vam7p is anchored at the vacuolar membrane through the specific interaction of its PX domain with phosphatidylinositol-3-phosphate (PI3P) present in bilayers. It plays an essential role in vacuole fusion. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction.


Pssm-ID: 132807  Cd Length: 108  Bit Score: 69.22  E-value: 1.50e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  51 TYQVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTP---EIPSKHvRNWV----PKVLEQRRQGLETYLQAvILENE 123
Cdd:cd06897   14 PYTVYNIQVRLPLRSYTVSRRYSEFVALHKQLESEVGIEppyPLPPKS-WFLStssnPKLVEERRVGLEAFLRA-LLNDE 91
                         90
                 ....*....|....*..
gi 767935784 124 ELP----KLFLDFLNVR 136
Cdd:cd06897   92 DSRwrnsPAVKEFLNLP 108
PX pfam00787
PX domain; PX domains bind to phosphoinositides.
58-136 2.10e-15

PX domain; PX domains bind to phosphoinositides.


Pssm-ID: 459940  Cd Length: 84  Bit Score: 68.42  E-value: 2.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784   58 EVLMNGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSK-HVRNWVPKVLEQRRQGLETYLQAVILENE-ELPKLFLDF 132
Cdd:pfam00787   1 LPTFSLEEWSVRRRYSDFVELHKKLLRKFPSviiPPLPPKrWLGRYNEEFIEKRRKGLEQYLQRLLQHPElRNSEVLLEF 80

                  ....
gi 767935784  133 LNVR 136
Cdd:pfam00787  81 LESD 84
PX smart00312
PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function ...
39-134 8.63e-14

PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.


Pssm-ID: 214610  Cd Length: 105  Bit Score: 64.67  E-value: 8.63e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784    39 IVLEIAFSNGRLTYQVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSKHV----RNWVPKVLEQRRQGL 111
Cdd:smart00312   1 VVEPEKIGDGKHYYYVIEIETKTGLEEWTVSRRYSDFLELHSKLKKHFPRsilPPLPGKKLfgrlNNFSEEFIEKRRRGL 80
                           90       100
                   ....*....|....*....|....*.
gi 767935784   112 ETYLQAvILENEELP---KLFLDFLN 134
Cdd:smart00312  81 EKYLQS-LLNHPELInhsEVVLEFLE 105
PX_SNX17_31 cd06885
The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31; The PX domain ...
51-118 1.50e-10

The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Members of this subfamily include sorting nexin 17 (SNX17), SNX31, and similar proteins. They contain an N-terminal PX domain followed by a truncated FERM (4.1, ezrin, radixin, and moesin) domain and a unique C-terminal region. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX17 is known to regulate the trafficking and processing of a number of proteins. It binds some members of the low-density lipoprotein receptor (LDLR) family such as LDLR, VLDLR, ApoER2, and others, regulating their endocytosis. It also binds P-selectin and may regulate its lysosomal degradation. SNX17 is highly expressed in neurons. It binds amyloid precursor protein (APP) and may be involved in its intracellular trafficking and processing to amyloid beta peptide, which plays a central role in the pathogenesis of Alzheimer's disease. The biological function of SNX31 is unknown.


Pssm-ID: 132795  Cd Length: 104  Bit Score: 55.80  E-value: 1.50e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767935784  51 TYQVFKIEVlmNGRKHFVeKRYSEFHALHKKLKK---CIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAV 118
Cdd:cd06885   17 TYVAYNIHI--NGVLHCS-VRYSQLHGLNEQLKKefgNRKLPPFPPKKLLPLTPAQLEERRLQLEKYLQAV 84
PX_IRAS cd06875
The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor ...
51-133 1.95e-10

The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected; The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Imidazoline Receptor Antisera-Selected (IRAS), also called nischarin, contains an N-terminal PX domain, leucine rich repeats, and a predicted coiled coil domain. The PX domain of IRAS binds to phosphatidylinositol-3-phosphate in membranes. Together with the coiled coil domain, it is essential for the localization of IRAS to endosomes. IRAS has been shown to interact with integrin and inhibit cell migration. Its interaction with alpha5 integrin causes a redistribution of the receptor from the cell surface to endosomal structures, suggesting that IRAS may function as a sorting nexin (SNX) which regulates the endosomal trafficking of integrin. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132785  Cd Length: 116  Bit Score: 56.13  E-value: 1.95e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  51 TYQVFKIEVLMNGRKHFVEKRYSEFHALHKKL---KKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAV-ILENEELP 126
Cdd:cd06875   16 GYTVYIIEVKVGSVEWTVKHRYSDFAELHDKLvaeHKVDKDLLPPKKLIGNKSPSFVEKRRKELEIYLQTLlSFFQKTMP 95

                 ....*..
gi 767935784 127 KLFLDFL 133
Cdd:cd06875   96 RELAHFL 102
PX_CISK cd06870
The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase; The ...
52-135 3.91e-10

The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Cytokine-independent survival kinase (CISK), also called Serum- and Glucocorticoid-induced Kinase 3 (SGK3), plays a role in cell growth and survival. It is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. CISK/SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. N-terminal to a catalytic kinase domain, CISK contains a PX domain which binds highly phosphorylated PIs, directs membrane localization, and regulates the enzyme's activity.


Pssm-ID: 132780  Cd Length: 109  Bit Score: 55.11  E-value: 3.91e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  52 YQVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKciKTP----EIPSKHV--RNWVPKVLEQRRQGLETYLQAVILENE-- 123
Cdd:cd06870   20 FTVYKVVVSVGRSSWFVFRRYAEFDKLYESLKK--QFPasnlKIPGKRLfgNNFDPDFIKQRRAGLDEFIQRLVSDPKll 97
                         90
                 ....*....|..
gi 767935784 124 ELPKlFLDFLNV 135
Cdd:cd06870   98 NHPD-VRAFLQM 108
PX_RUN cd07277
The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX ...
46-119 1.12e-09

The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized proteins containing an N-terminal RUN domain and a C-terminal PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction. The RUN domain is found in GTPases in the Rap and Rab families and may play a role in Ras-like signaling pathways.


Pssm-ID: 132810  Cd Length: 118  Bit Score: 53.89  E-value: 1.12e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  46 SNGRLTYQVFkieVLMNGRKHFVEKRYSEFHALHKKLKKciKTPEI------PSKHVRNWVPKVLEQRRQGLETYLQAVI 119
Cdd:cd07277   15 SDAHHVYQVY---IRIRDDEWNVYRRYSEFYELHKKLKK--KFPVVrsfdfpPKKAIGNKDAKFVEERRKRLQVYLRRVV 89
COG5391 COG5391
Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function ...
62-160 1.73e-09

Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only];


Pssm-ID: 227680 [Multi-domain]  Cd Length: 524  Bit Score: 56.34  E-value: 1.73e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  62 NGRKHFVEKRYSEFHALHKKLKKCIKT---PEIPSKHV------RNWVPKVLEQRRQGLETYLQAVILENeELPKLFL-- 130
Cdd:COG5391  169 ESRPLVVRRRYSDFESLHSILIKLLPLcaiPPLPSKKSnseyygDRFSDEFIEERRQSLQNFLRRVSTHP-LLSNYKNsk 247
                         90       100       110
                 ....*....|....*....|....*....|
gi 767935784 131 DFLNVRHLPSLPKAEScGSFDETESEESSK 160
Cdd:COG5391  248 SWESHSTLLSSFIENR-KSVPTPLSLDLTS 276
PX_YPT35 cd07280
The phosphoinositide binding Phox Homology domain of the fungal protein YPT35; The PX domain ...
70-120 5.32e-08

The phosphoinositide binding Phox Homology domain of the fungal protein YPT35; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of YPT35 proteins from the fungal subkingdom Dikarya. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction. The PX domain of YPT35 binds to phosphatidylinositol 3-phosphate (PI3P). It also serves as a protein interaction domain, binding to members of the Yip1p protein family, which localize to the ER and Golgi. YPT35 is mainly associated with endosomes and together with Yip1p proteins, may be involved in a specific function in the endocytic pathway.


Pssm-ID: 132813  Cd Length: 120  Bit Score: 49.63  E-value: 5.32e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767935784  70 KRYSEFHALHKKLKKCIKT------PEIPSKhvRNWV-------PKVLEQRRQGLETYLQAVIL 120
Cdd:cd07280   43 KRYSEFVQLREALLDEFPRhkrneiPQLPPK--VPWYdsrvnlnKAWLEKRRRGLQYFLNCVLL 104
PX_SNX27 cd06886
The phosphoinositide binding Phox Homology domain of Sorting Nexin 27; The PX domain is a ...
51-118 2.08e-06

The phosphoinositide binding Phox Homology domain of Sorting Nexin 27; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX27 contains an N-terminal PDZ domain followed by a PX domain and a Ras-Associated (RA) domain. It binds G protein-gated potassium (Kir3) channels, which play a role in neuronal excitability control, through its PDZ domain. SNX27 downregulates Kir3 channels by promoting their movement in the endosome, reducing surface expression and increasing degradation. SNX27 also associates with 5-hydroxytryptamine type 4 receptor (5-HT4R), cytohesin associated scaffolding protein (CASP), and diacylglycerol kinase zeta, and may play a role in their intracellular trafficking and endocytic recycling. The SNX27 PX domain preferentially binds to phosphatidylinositol-3-phosphate (PI3P) and is important for targeting to the early endosome.


Pssm-ID: 132796  Cd Length: 106  Bit Score: 44.71  E-value: 2.08e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767935784  51 TYQVFKIEvlMNGRkHFVEKRYSEFHALHKKLKKCIKT---PEIPSKHVRNWVPKVLEQRRQGLETYLQAV 118
Cdd:cd06886   20 KFVVYNIY--MAGR-QLCSRRYREFANLHQNLKKEFPDfqfPKLPGKWPFSLSEQQLDARRRGLEQYLEKV 87
PX_MONaKA cd06871
The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase; The PX domain ...
68-131 5.07e-06

The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. MONaKA (Modulator of Na,K-ATPase) binds the plasma membrane ion transporter, Na,K-ATPase, and modulates its enzymatic and ion pump activities. It modulates brain Na,K-ATPase and may be involved in regulating electrical excitability and synaptic transmission. MONaKA contains an N-terminal PX domain and a C-terminal catalytic kinase domain. The PX domain interacts with PIs and plays a role in targeting proteins to PI-enriched membranes.


Pssm-ID: 132781  Cd Length: 120  Bit Score: 43.89  E-value: 5.07e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767935784  68 VEKRYSEFHALHKKLKKC-IKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAV----ILENEELPKLFLD 131
Cdd:cd06871   40 VIRRYNDFDLLNASLQISgISLPLPPKKLIGNMDREFIAERQQGLQNYLNVIlmnpILASCLPVKKFLD 108
PX_UP2_fungi cd06869
The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins; The PX ...
43-133 8.83e-06

The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.


Pssm-ID: 132779  Cd Length: 119  Bit Score: 43.43  E-value: 8.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  43 IAFSNGRLTYQVFKIEVLMNG---RKHFVEKRYSEFHALHKKLKKciktpEIPSKHVRNWVPK---VLEQRRQGLETYLQ 116
Cdd:cd06869   24 AYFVNRSKHHYEFIIRVRREGeeyRTIYVARRYSDFKKLHHDLKK-----EFPGKKLPKLPHKdklPREKLRLSLRQYLR 98
                         90
                 ....*....|....*...
gi 767935784 117 AVILENE-ELPKLFLDFL 133
Cdd:cd06869   99 SLLKDPEvAHSSILQEFL 116
PX_SNX1_2_like cd06859
The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2; The PX domain is ...
68-130 1.72e-05

The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily consists of SNX1, SNX2, and similar proteins. They harbor a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvature, C-terminal to the PX domain. Both domains have been shown to determine the specific membrane-targeting of SNX1. SNX1 and SNX2 are components of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization of the cargo-recognition subcomplex.


Pssm-ID: 132769 [Multi-domain]  Cd Length: 114  Bit Score: 42.57  E-value: 1.72e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767935784  68 VEKRYSEFHALHKKLKKC---IKTPEIPSKH-VRNWVPKV--LEQRRQGLETYLQAV----ILENEELPKLFL 130
Cdd:cd06859   39 VLRRYSDFLWLYERLVEKypgRIVPPPPEKQaVGRFKVKFefIEKRRAALERFLRRIaahpVLRKDPDFRLFL 111
PX_SNX25 cd06878
The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a ...
68-125 1.91e-05

The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. The function of SNX25 is not yet known. It has been found in exosomes from human malignant pleural effusions. SNX25 shows the same domain architecture as SNX13 and SNX14, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132788  Cd Length: 127  Bit Score: 42.75  E-value: 1.91e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767935784  68 VEKRYSEFHALHKKLKKC------IKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAvILENEEL 125
Cdd:cd06878   52 VTRKLSEFHDLHRKLKECsswlkkVELPSLSKKWFKSIDKKFLDKSKNQLQKYLQF-ILEDETL 114
PX_MDM1p cd06876
The phosphoinositide binding Phox Homology domain of yeast MDM1p; The PX domain is a ...
52-120 2.24e-05

The phosphoinositide binding Phox Homology domain of yeast MDM1p; The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Yeast MDM1p is a filament-like protein localized in punctate structures distributed throughout the cytoplasm. It plays an important role in nuclear and mitochondrial transmission to daughter buds. Members of this subfamily show similar domain architectures as some sorting nexins (SNXs). Some members are similar to SNX19 in that they contain an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. Others are similar to SNX13 and SNX14, which also harbor these three domains as well as a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132786  Cd Length: 133  Bit Score: 42.68  E-value: 2.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  52 YQVFKIEVLMNGRKHF-----VEKRYSEFHALHKKLKKciKTPEI-----PSKHV---RNWVPKVLEQRRQGLETYLQAV 118
Cdd:cd06876   38 FVVYLIEVQRLNNDDQssgwvVARRYSEFLELHKYLKK--RYPGVlkldfPQKRKislKYSKTLLVEERRKALEKYLQEL 115

                 ..
gi 767935784 119 IL 120
Cdd:cd06876  116 LK 117
PX_SNX16 cd07276
The phosphoinositide binding Phox Homology domain of Sorting Nexin 16; The PX domain is a ...
49-119 2.25e-05

The phosphoinositide binding Phox Homology domain of Sorting Nexin 16; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX16 contains a central PX domain followed by a coiled-coil region. SNX16 is localized in early and recycling endosomes through the binding of its PX domain to phosphatidylinositol-3-phosphate (PI3P). It plays a role in epidermal growth factor (EGF) signaling by regulating EGF receptor membrane trafficking.


Pssm-ID: 132809  Cd Length: 110  Bit Score: 42.01  E-value: 2.25e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767935784  49 RLTYQVFKIEVLM-NGRKHFVEKRYSEFHALHKKLKKC-----IKTPeiPSKHVR-NWVPKVLEQRRQGLETYLQAVI 119
Cdd:cd07276   17 RARFTVYKIRVENkVGDSWFVFRRYTDFVRLNDKLKQMfpgfrLSLP--PKRWFKdNFDPDFLEERQLGLQAFVNNIM 92
PX_SNX20_21_like cd07279
The phosphoinositide binding Phox Homology domain of Sorting Nexins 20 and 21; The PX domain ...
67-133 2.98e-05

The phosphoinositide binding Phox Homology domain of Sorting Nexins 20 and 21; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily consists of SNX20, SNX21, and similar proteins. SNX20 interacts with P-Selectin glycoprotein ligand-1 (PSGL-1), a surface-expressed mucin that acts as a ligand for the selectin family of adhesion proteins. It may function in the sorting and cycling of PSGL-1 into endosomes. SNX21, also called SNX-L, is distinctly and highly-expressed in fetal liver and may be involved in protein sorting and degradation during embryonic liver development.


Pssm-ID: 132812  Cd Length: 112  Bit Score: 41.54  E-value: 2.98e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767935784  67 FVEKRYSEFHALHKKLKK----CIKTPEIPSKH-VRNWVPKVLEQRRQGLETYLQaVILENEEL--PKLFLDFL 133
Cdd:cd07279   37 FIERRYSDFLKLYKALRKqhpqLMAKVSFPRKVlMGNFSSELIAERSRAFEQFLG-HILSIPNLrdSKAFLDFL 109
PX_SNX13 cd06873
The phosphoinositide binding Phox Homology domain of Sorting Nexin 13; The PX domain is a ...
51-133 4.41e-05

The phosphoinositide binding Phox Homology domain of Sorting Nexin 13; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX13, also called RGS-PX1, contains an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs. It specifically binds to the stimulatory subunit of the heterotrimeric G protein G(alpha)s, serving as its GTPase activating protein, through the RGS domain. It preferentially binds phosphatidylinositol-3-phosphate (PI3P) through the PX domain and is localized in early endosomes. SNX13 is involved in endosomal sorting of EGFR into multivesicular bodies (MVB) for delivery to the lysosome.


Pssm-ID: 132783  Cd Length: 120  Bit Score: 41.48  E-value: 4.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  51 TYQVFKIEVLMNGRKHFVE-----KRYSEFHALHKKLKKciKTPEIPS------KHVRNWVPKVLEQRRQGLETYLQaVI 119
Cdd:cd06873   21 TYAVYAISVTRIYPNGQEEswhvyRRYSDFHDLHMRLKE--KFPNLSKlsfpgkKTFNNLDRAFLEKRRKMLNQYLQ-SL 97
                         90       100
                 ....*....|....*....|
gi 767935784 120 LENEEL---PKLF---LDFL 133
Cdd:cd06873   98 LNPEVLdanPGLQeivLDFL 117
PX_KIF16B_SNX23 cd06874
The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23; The ...
48-119 5.97e-05

The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. KIF16B, also called sorting nexin 23 (SNX23), is a family-3 kinesin which harbors an N-terminal kinesin motor domain containing ATP and microtubule binding sites, a ForkHead Associated (FHA) domain, and a C-terminal PX domain. The PX domain of KIF16B binds to phosphatidylinositol-3-phosphate (PI3P) in early endosomes and plays a role in the transport of early endosomes to the plus end of microtubules. By regulating early endosome plus end motility, KIF16B modulates the balance between recycling and degradation of receptors. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132784  Cd Length: 127  Bit Score: 41.21  E-value: 5.97e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767935784  48 GRLTYQVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKC---IKTPEIPSKHV-RNWVPKVLEQRRQGLETYLQAVI 119
Cdd:cd06874   14 GKDEHFEFEVKITVLDETWTVFRRYSRFRELHKTMKLKypeVAALEFPPKKLfGNKSERVAKERRRQLETYLRNFF 89
PX_SNX41_42 cd06867
The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42; The PX ...
65-134 9.67e-05

The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX41 and SNX42 (also called Atg20p) form dimers with SNX4, and are required in protein recycling from the sorting endosome (post-Golgi endosome) back to the late Golgi in yeast.


Pssm-ID: 132777  Cd Length: 112  Bit Score: 40.31  E-value: 9.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  65 KHFVEKRYSEFHALHKKLKKCIKT---PEIPSKH----------VRNWVPKVLEQRRQGLETYLQAvILENEELPK--LF 129
Cdd:cd06867   27 GSEVKRRYSEFESLRKNLTRLYPTliiPPIPEKHslkdyakkpsKAKNDAKIIERRKRMLQRFLNR-CLQHPILRNdiVF 105

                 ....*
gi 767935784 130 LDFLN 134
Cdd:cd06867  106 QKFLD 110
PX_PI3K_C2 cd06883
The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases; The ...
52-124 9.69e-05

The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They are also involved in the regulation of clathrin-mediated membrane trafficking as well as ATP-dependent priming of neurosecretory granule exocytosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 domain, a PI3K homology domain of unknown function, an ATP-binding cataytic domain, a PX domain, and a second C2 domain at the C-terminus. Class II PI3Ks include three vertebrate isoforms (alpha, beta, and gamma), the Drosophila PI3K_68D, and similar proteins.


Pssm-ID: 132793  Cd Length: 109  Bit Score: 40.42  E-value: 9.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  52 YQVFKIEVLMNGRKH--FVEKRYSEFHALHKKLKK---CIKTPEIPSKHV--RNWVPKVLEQRRQGLETYLQAVILENEE 124
Cdd:cd06883   16 YYIYVVKVTRENQTEpsFVFRTFEEFQELHNKLSLlfpSLKLPSFPARVVlgRSHIKQVAERRKIELNSYLKSLFNASPE 95
PX_SNX10 cd06898
The phosphoinositide binding Phox Homology domain of Sorting Nexin 10; The PX domain is a ...
68-119 1.20e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 10; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX10 may be involved in the regulation of endosome homeostasis. Its expression induces the formation of giant vacuoles in mammalian cells.


Pssm-ID: 132808  Cd Length: 113  Bit Score: 40.01  E-value: 1.20e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 767935784  68 VEKRYSEFHALHKKLKK---CIKTPEIPSKHV--RNWVPKVLEQRRQGLETYLQAVI 119
Cdd:cd06898   39 VRRRYSEFVWLRNRLQKnalLIQLPSLPPKNLfgRFNNEGFIEERQQGLQDFLEKVL 95
PX_p40phox cd06882
The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase; The ...
48-116 1.23e-04

The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase; The PX domain is a phosphoinositide binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. p40phox contains an N-terminal PX domain, a central SH3 domain that binds p47phox, and a C-terminal PB1 domain that interacts with p67phox. It is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p40phox positively regulates NADPH oxidase in both phosphatidylinositol-3-phosphate (PI3P)-dependent and PI3P-independent manner. The PX domain is a phospholipid-binding module involved in the membrane targeting of proteins. The p40phox PX domain binds to PI3P, an abundant lipid in phagosomal membranes, playing an important role in the localization of NADPH oxidase. The PX domain of p40phox is also involved in protein-protein interaction.


Pssm-ID: 132792  Cd Length: 123  Bit Score: 40.11  E-value: 1.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  48 GRLTYQVFKIEV-LMNGRKHFVEKRYSEFHALHKKL------------KKCIkTPEIPSKHVRNWVPKVLEQRRQGLETY 114
Cdd:cd06882   16 GFTNYYVFVIEVkTKGGSKYLIYRRYRQFFALQSKLeerfgpeagssaYDCT-LPTLPGKIYVGRKAEIAERRIPLLNRY 94

                 ..
gi 767935784 115 LQ 116
Cdd:cd06882   95 MK 96
PX_Grd19 cd07295
The phosphoinositide binding Phox Homology domain of fungal Grd19; The PX domain is a ...
64-118 1.35e-04

The phosphoinositide binding Phox Homology domain of fungal Grd19; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Grd19 is involved in the localization of late Golgi membrane proteins in yeast. Grp19 associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor for the retromer.


Pssm-ID: 132828  Cd Length: 116  Bit Score: 40.17  E-value: 1.35e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 767935784  64 RKHFVEKRYSEFHALHKKLKK---CIKTPEIPSKHVRN-WVPKVLEQRRQGLETYLQAV 118
Cdd:cd07295   36 RVSSVRRRYSDFEYFRDILERespRVMIPPLPGKIFTNrFSDEVIEERRQGLETFLQSV 94
PX_SNX20 cd07300
The phosphoinositide binding Phox Homology domain of Sorting Nexin 20; The PX domain is a ...
52-133 4.57e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 20; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX20 interacts with P-Selectin glycoprotein ligand-1 (PSGL-1), a surface-expressed mucin that acts as a ligand for the selectin family of adhesion proteins. The PX domain of SNX20 binds PIs and targets the SNX20/PSGL-1 complex to endosomes. SNX20 may function in the sorting and cycling of PSGL-1 into endosomes.


Pssm-ID: 132833  Cd Length: 114  Bit Score: 38.64  E-value: 4.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  52 YQVFKIEVLMNG----RKHFVEKRYSEFHALHKKLKKC----IKTPEIPSKHV-RNWVPKVLEQRRQGLETYL-QAVILE 121
Cdd:cd07300   18 HVVYQIIVIQTGsfdcNKVVIERRYSDFLKLHQELLSDfseeLEDVVFPKKKLtGNFSEEIIAERRVALRDYLtLLYSLR 97
                         90
                 ....*....|..
gi 767935784 122 NEELPKLFLDFL 133
Cdd:cd07300   98 FVRRSQAFQDFL 109
PX_SNX3_like cd06894
The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins; The ...
68-130 6.98e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. This subfamily is composed of SNX3, SNX12, and fungal Grd19. Grd19 is involved in the localization of late Golgi membrane proteins in yeast. SNX3/Grp19 associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor for the retromer.


Pssm-ID: 132804  Cd Length: 123  Bit Score: 38.21  E-value: 6.98e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767935784  68 VEKRYSEFHALHKKLKKCIK--TPEIPSKHVRNWVP----------KVLEQRRQGLETYLQAV----ILENEELPKLFL 130
Cdd:cd06894   40 VRRRYSDFEWLRSELERDSKivVPPLPGKALKRQLPfrgddgifeeEFIEERRKGLETFINKVaghpLAQNEKCLHMFL 118
PX_SNX3 cd07293
The phosphoinositide binding Phox Homology domain of Sorting Nexin 3; The PX domain is a ...
41-130 7.05e-04

The phosphoinositide binding Phox Homology domain of Sorting Nexin 3; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX3 associates with early endosomes through a PX domain-mediated interaction with phosphatidylinositol-3-phosphate (PI3P). It associates with the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi, and functions as a cargo-specific adaptor for the retromer. SNX3 is required for the formation of multivesicular bodies, which function as transport intermediates to late endosomes. It also promotes cell surface expression of the amiloride-sensitive epithelial Na+ channel (ENaC), which is critical in sodium homeostasis and maintenance of extracellular fluid volume.


Pssm-ID: 132826  Cd Length: 123  Bit Score: 38.05  E-value: 7.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  41 LEIAFSN------GRLTYQVFKIEVLMNG-----RKHFVEKRYSEFHALHKKLKKCIKT--PEIPSKHVRNWVP------ 101
Cdd:cd07293    2 LEIDVTNpqtvgvGRGRFTTYEIRLKTNLpifklKESTVRRRYSDFEWLRSELERESKVvvPPLPGKALFRQLPfrgddg 81
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 767935784 102 ----KVLEQRRQGLETYLQAV----ILENEELPKLFL 130
Cdd:cd07293   82 ifddSFIEERKQGLEQFLNKVaghpLAQNERCLHMFL 118
PX_SNX8_Mvp1p_like cd06866
The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p; The PX ...
68-130 1.68e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. SNX8 and the yeast counterpart Mvp1p are involved in sorting and delivery of late-Golgi proteins, such as carboxypeptidase Y, to vacuoles.


Pssm-ID: 132776  Cd Length: 105  Bit Score: 36.82  E-value: 1.68e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767935784  68 VEKRYSEFHALHKKLKKCI---KTPEIPSKHV-RNWVPKVLEQRRQGLETYLQAV----ILENEELPKLFL 130
Cdd:cd06866   32 VYRRYSDFVWLHEYLLKRYpyrMVPALPPKRIgGSADREFLEARRRGLSRFLNLVarhpVLSEDELVRTFL 102
PX_SNX14 cd06877
The phosphoinositide binding Phox Homology domain of Sorting Nexin 14; The PX domain is a ...
46-130 7.04e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 14; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX14 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. It is expressed in the embryonic nervous system of mice, and is co-expressed in the motoneurons and the anterior pituary with Islet-1. SNX14 shows a similar domain architecture as SNX13, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132787  Cd Length: 119  Bit Score: 35.04  E-value: 7.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  46 SNGRlTYQVFKIEVLMNGR-------KHF-VEKRYSEFHALHKKLKK---CIKTPEIPSKhvRNWVPKV---LEQRRQGL 111
Cdd:cd06877   17 SNGE-RIYVFCIEVERNDRrakghepQHWsVLRRYNEFYVLESKLTEfhgEFPDAPLPSR--RIFGPKSyefLESKREIF 93
                         90       100
                 ....*....|....*....|...
gi 767935784 112 ETYLQAV----ILENEELPKLFL 130
Cdd:cd06877   94 EEFLQKLlqkpELRGSELLYDFL 116
PX_SNX12 cd07294
The phosphoinositide binding Phox Homology domain of Sorting Nexin 12; The PX domain is a ...
49-130 9.45e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 12; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Some SNXs are localized in early endosome structures such as clathrin-coated pits, while others are located in late structures of the endocytic pathway. The specific function of SNX12 has yet to be elucidated.


Pssm-ID: 132827  Cd Length: 132  Bit Score: 35.02  E-value: 9.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767935784  49 RLTYQVFKIevlmngRKHFVEKRYSEFHALHKKLKK--CIKTPEIPSKHVRNWVP----------KVLEQRRQGLETYLQ 116
Cdd:cd07294   29 RTNLPIFKL------KESCVRRRYSDFEWLKNELERdsKIVVPPLPGKALKRQLPfrgdegifeeSFIEERRQGLEQFIN 102
                         90
                 ....*....|....*...
gi 767935784 117 AV----ILENEELPKLFL 130
Cdd:cd07294  103 KIaghpLAQNERCLHMFL 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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