|
Name |
Accession |
Description |
Interval |
E-value |
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1541-1632 |
2.88e-12 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
:
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.44 E-value: 2.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEgcHSFVIVDWDK-ATPGDVVTGYLVYsasYEDFIRNKW---STQASSVTHLPIENLKPNTRYYFKVQAQ 1616
Cdd:cd00063 3 PPTNLRVTDVT--STSVTLSWTPpEDDGGPITGYVVE---YREKGSGDWkevEVTPGSETSYTLTGLKPGTEYEFRVRAV 77
|
90
....*....|....*.
gi 767943731 1617 NPHGYGPISPSVSFVT 1632
Cdd:cd00063 78 NGGGESPPSESVTVTT 93
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
245-335 |
5.58e-12 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
:
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 63.28 E-value: 5.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKVKEYILSYAPALKPFGAKSLTYPGDTTSALVDGLQPGERYLFKIRATNRR 324
Cdd:cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGG 80
|
90
....*....|.
gi 767943731 325 GLGPHSKAFIV 335
Cdd:cd00063 81 GESPPSESVTV 91
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
515-947 |
3.27e-11 |
|
transcriptional regulator ICP4; Provisional
The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 68.66 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 515 RPSLPASLNDNDLVDSDEDERAVGSLHPKGAFAQPR----PALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAe 590
Cdd:PHA03307 31 AADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEpptgPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPP- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 591 eDSSASAPPSRLSPPHGGSSrllPTQPHLSSPLSKGGKDGEDAPATNSNAPsrstmsssvsshlssrtqVSEGAEASDGE 670
Cdd:PHA03307 110 -GPSSPDPPPPTPPPASPPP---SPAPDLSEMLRPVGSPGPPPAASPPAAG------------------ASPAAVASDAA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 671 SHGDGdredgGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPSRFSIGRGPRLQPSSSPQSTVPSRAHpRVPSHSDS 750
Cdd:PHA03307 168 SSRQA-----ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAG-ASSSDSSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 751 HPKLSSGIHGDEEDEKPLPATVVNDHVPSSSRQPISRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPqgkySSLAS 830
Cdd:PHA03307 242 SESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSP----RASSS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 831 KAQDVQQSTDADTEGHSPKAQPGStdrhaSPARPPA-ARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAGR 909
Cdd:PHA03307 318 SSSSRESSSSSTSSSSESSRGAAV-----SPGPSPSrSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 767943731 910 SPSQPRL-----SLTQAGRPRPTSQGRSHSSSDPYTASSRGML 947
Cdd:PHA03307 393 AVAGRARrrdatGRFPAGRPRPSPLDAGAASGAFYARYPLLTP 435
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
144-237 |
1.84e-09 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
:
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 56.35 E-value: 1.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 144 DVPDDISVRVMSSQSVLVSWvDPVLEKQKKVVasrQYTVRYREKGE--LARWDYKQIANRRVLIENLIPDTVYEFAVRIS 221
Cdd:cd00063 2 SPPTNLRVTDVTSTSVTLSW-TPPEDDGGPIT---GYVVEYREKGSgdWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAV 77
|
90
....*....|....*.
gi 767943731 222 QGERDGKWSTSVFQRT 237
Cdd:cd00063 78 NGGGESPPSESVTVTT 93
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
694-1235 |
4.76e-09 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.88 E-value: 4.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 694 RPASGHFhllrhkPFAANG-RSPsrfsiGRGPRLQPSSSPQSTVPSRA-HPRVPSHSDSHPKLSSGIHGDEE---DEKPL 768
Cdd:PHA03247 2482 RPAEARF------PFAAGAaPDP-----GGGGPPDPDAPPAPSRLAPAiLPDEPVGEPVHPRMLTWIRGLEElasDDAGD 2550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 769 PATVVNDHVPSSSrqpisrgwedlrrsPQRGASLHRKEPIPENPKSTGADTHPqgkysslaskaqdvqqstDADTEGHSP 848
Cdd:PHA03247 2551 PPPPLPPAAPPAA--------------PDRSVPPPRPAPRPSEPAVTSRARRP------------------DAPPQSARP 2598
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 849 KAQPGSTDRHASPARPPAARSQQHPsvPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAgrsPSQPRLSLTQagrpRPTS 928
Cdd:PHA03247 2599 RAPVDDRGDPRGPAPPSPLPPDTHA--PDPPPPSPSPAANEPDPHPPPTVPPPERPRDD---PAPGRVSRPR----RARR 2669
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 929 QGRSHSSSDPYTASSRGMLPTALQN----QDEDAQGSYDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGA 1004
Cdd:PHA03247 2670 LGRAAQASSPPQRPRRRAARPTVGSltslADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPA 2749
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1005 GGDHRSQRGHAASPARPSRPGGPQSRARVPSRAAPgksePPSKRPLSSkSQQSVSAEDDEEEDAGFFKGGKEDLLSSSVP 1084
Cdd:PHA03247 2750 TPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT----RPAVASLSE-SRESLPSPWDPADPPAAVLAPAAALPPAASP 2824
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1085 KwPSSSTPRGGKDADGSLAKEEREPAIALaprGGSLAP---VKRPLPPPPGSSPRAShvPSRLPPRSAATVSPVAGTHPW 1161
Cdd:PHA03247 2825 A-GPLPPPTSAQPTAPPPPPGPPPPSLPL---GGSVAPggdVRRRPPSRSPAAKPAA--PARPPVRRLARPAVSRSTESF 2898
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767943731 1162 PQyttraPPGHFSTTPMLSLRQRMMharfRNPLSRQPARPSYRQGYNGRPNVEGKVLPGSNGKPNGQRIINGPQ 1235
Cdd:PHA03247 2899 AL-----PPDQPERPPQPQAPPPPQ----PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPW 2963
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
41-127 |
3.48e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
:
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 38.63 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 41 PNKPLRVRVRS-SDDRLSVAWKAPRLSGAksprRSRGFLLGYGESGRK--MNYVPLTRDERTHEIKKLASESVYVVSLQS 117
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDGG----PITGYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFRVRA 76
|
90
....*....|
gi 767943731 118 MNSQGRSQPV 127
Cdd:cd00063 77 VNGGGESPPS 86
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1541-1632 |
2.88e-12 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.44 E-value: 2.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEgcHSFVIVDWDK-ATPGDVVTGYLVYsasYEDFIRNKW---STQASSVTHLPIENLKPNTRYYFKVQAQ 1616
Cdd:cd00063 3 PPTNLRVTDVT--STSVTLSWTPpEDDGGPITGYVVE---YREKGSGDWkevEVTPGSETSYTLTGLKPGTEYEFRVRAV 77
|
90
....*....|....*.
gi 767943731 1617 NPHGYGPISPSVSFVT 1632
Cdd:cd00063 78 NGGGESPPSESVTVTT 93
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
245-335 |
5.58e-12 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 63.28 E-value: 5.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKVKEYILSYAPALKPFGAKSLTYPGDTTSALVDGLQPGERYLFKIRATNRR 324
Cdd:cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGG 80
|
90
....*....|.
gi 767943731 325 GLGPHSKAFIV 335
Cdd:cd00063 81 GESPPSESVTV 91
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
245-330 |
7.47e-12 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 62.82 E-value: 7.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKVKEYILSYAPALKPFGAKSLTYPGDTTSALVDGLQPGERYLFKIRATNRR 324
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPPDGNGPITGYEVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVRVQAVNGG 79
|
....*.
gi 767943731 325 GLGPHS 330
Cdd:pfam00041 80 GEGPPS 85
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
515-947 |
3.27e-11 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 68.66 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 515 RPSLPASLNDNDLVDSDEDERAVGSLHPKGAFAQPR----PALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAe 590
Cdd:PHA03307 31 AADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEpptgPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPP- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 591 eDSSASAPPSRLSPPHGGSSrllPTQPHLSSPLSKGGKDGEDAPATNSNAPsrstmsssvsshlssrtqVSEGAEASDGE 670
Cdd:PHA03307 110 -GPSSPDPPPPTPPPASPPP---SPAPDLSEMLRPVGSPGPPPAASPPAAG------------------ASPAAVASDAA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 671 SHGDGdredgGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPSRFSIGRGPRLQPSSSPQSTVPSRAHpRVPSHSDS 750
Cdd:PHA03307 168 SSRQA-----ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAG-ASSSDSSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 751 HPKLSSGIHGDEEDEKPLPATVVNDHVPSSSRQPISRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPqgkySSLAS 830
Cdd:PHA03307 242 SESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSP----RASSS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 831 KAQDVQQSTDADTEGHSPKAQPGStdrhaSPARPPA-ARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAGR 909
Cdd:PHA03307 318 SSSSRESSSSSTSSSSESSRGAAV-----SPGPSPSrSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 767943731 910 SPSQPRL-----SLTQAGRPRPTSQGRSHSSSDPYTASSRGML 947
Cdd:PHA03307 393 AVAGRARrrdatGRFPAGRPRPSPLDAGAASGAFYARYPLLTP 435
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
144-237 |
1.84e-09 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 56.35 E-value: 1.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 144 DVPDDISVRVMSSQSVLVSWvDPVLEKQKKVVasrQYTVRYREKGE--LARWDYKQIANRRVLIENLIPDTVYEFAVRIS 221
Cdd:cd00063 2 SPPTNLRVTDVTSTSVTLSW-TPPEDDGGPIT---GYVVEYREKGSgdWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAV 77
|
90
....*....|....*.
gi 767943731 222 QGERDGKWSTSVFQRT 237
Cdd:cd00063 78 NGGGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
694-1235 |
4.76e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.88 E-value: 4.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 694 RPASGHFhllrhkPFAANG-RSPsrfsiGRGPRLQPSSSPQSTVPSRA-HPRVPSHSDSHPKLSSGIHGDEE---DEKPL 768
Cdd:PHA03247 2482 RPAEARF------PFAAGAaPDP-----GGGGPPDPDAPPAPSRLAPAiLPDEPVGEPVHPRMLTWIRGLEElasDDAGD 2550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 769 PATVVNDHVPSSSrqpisrgwedlrrsPQRGASLHRKEPIPENPKSTGADTHPqgkysslaskaqdvqqstDADTEGHSP 848
Cdd:PHA03247 2551 PPPPLPPAAPPAA--------------PDRSVPPPRPAPRPSEPAVTSRARRP------------------DAPPQSARP 2598
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 849 KAQPGSTDRHASPARPPAARSQQHPsvPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAgrsPSQPRLSLTQagrpRPTS 928
Cdd:PHA03247 2599 RAPVDDRGDPRGPAPPSPLPPDTHA--PDPPPPSPSPAANEPDPHPPPTVPPPERPRDD---PAPGRVSRPR----RARR 2669
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 929 QGRSHSSSDPYTASSRGMLPTALQN----QDEDAQGSYDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGA 1004
Cdd:PHA03247 2670 LGRAAQASSPPQRPRRRAARPTVGSltslADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPA 2749
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1005 GGDHRSQRGHAASPARPSRPGGPQSRARVPSRAAPgksePPSKRPLSSkSQQSVSAEDDEEEDAGFFKGGKEDLLSSSVP 1084
Cdd:PHA03247 2750 TPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT----RPAVASLSE-SRESLPSPWDPADPPAAVLAPAAALPPAASP 2824
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1085 KwPSSSTPRGGKDADGSLAKEEREPAIALaprGGSLAP---VKRPLPPPPGSSPRAShvPSRLPPRSAATVSPVAGTHPW 1161
Cdd:PHA03247 2825 A-GPLPPPTSAQPTAPPPPPGPPPPSLPL---GGSVAPggdVRRRPPSRSPAAKPAA--PARPPVRRLARPAVSRSTESF 2898
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767943731 1162 PQyttraPPGHFSTTPMLSLRQRMMharfRNPLSRQPARPSYRQGYNGRPNVEGKVLPGSNGKPNGQRIINGPQ 1235
Cdd:PHA03247 2899 AL-----PPDQPERPPQPQAPPPPQ----PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPW 2963
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1541-1622 |
4.11e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 52.23 E-value: 4.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEGchSFVIVDWDKAtPGDVVTGYLV-YSASYEDfIRNKWSTQASSV--THLPIENLKPNTRYYFKVQAQN 1617
Cdd:smart00060 3 PPSNLRVTDVTS--TSVTLSWEPP-PDDGITGYIVgYRVEYRE-EGSEWKEVNVTPssTSYTLTGLKPGTEYEFRVRAVN 78
|
....*
gi 767943731 1618 PHGYG 1622
Cdd:smart00060 79 GAGEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1541-1625 |
3.99e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 49.34 E-value: 3.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEgcHSFVIVDWDKATPGD-VVTGYLVYSASYEDFIRNKWSTQASSVTHLPIENLKPNTRYYFKVQAQNPH 1619
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPPDGNgPITGYEVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVRVQAVNGG 79
|
....*.
gi 767943731 1620 GYGPIS 1625
Cdd:pfam00041 80 GEGPPS 85
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
144-230 |
8.89e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.57 E-value: 8.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 144 DVPDDISVRVMSSQSVLVSWvDPVLEKQKKVVasrQYTVRYREKGELARWDYKQIAN--RRVLIENLIPDTVYEFAVRIS 221
Cdd:pfam00041 1 SAPSNLTVTDVTSTSLTVSW-TPPPDGNGPIT---GYEVEYRPKNSGEPWNEITVPGttTSVTLTGLKPGTEYEVRVQAV 76
|
....*....
gi 767943731 222 QGERDGKWS 230
Cdd:pfam00041 77 NGGGEGPPS 85
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
245-327 |
9.76e-07 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 48.38 E-value: 9.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKvkEYILSYAPALKPFGA--KSLTYPGDTTSALVDGLQPGERYLFKIRATN 322
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGIT--GYIVGYRVEYREEGSewKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVN 78
|
....*
gi 767943731 323 RRGLG 327
Cdd:smart00060 79 GAGEG 83
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
146-387 |
1.85e-06 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 52.70 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 146 PDDISVRVMSSQSVLVSWvDPVLEKqkkvvASRQYTVrYREKGELARWdyKQIANRRVLI---ENLIPDTVYEFAVR--I 220
Cdd:COG3401 236 PTGLTATADTPGSVTLSW-DPVTES-----DATGYRV-YRSNSGDGPF--TKVATVTTTSytdTGLTNGTTYYYRVTavD 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 221 SQGERdGKWSTSVfQRTPESAPTTAPENLNVwpVNGKPTVVAASWDalPETEGKVKEYILSYAPAlKPFGAKSLTYPGDT 300
Cdd:COG3401 307 AAGNE-SAPSNVV-SVTTDLTPPAAPSGLTA--TAVGSSSITLSWT--ASSDADVTGYNVYRSTS-GGGTYTKIAETVTT 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 301 TSALVDGLQPGERYLFKIRATNRRGLGPHSKAFIVAMPTTskaDVEQNTEDNGKPEKPEPSSPSPRAPASSQHPSVPASP 380
Cdd:COG3401 380 TSYTDTGLTPGTTYYYKVTAVDAAGNESAPSEEVSATTAS---AASGESLTASVDAVPLTDVAGATAAASAASNPGVSAA 456
|
....*..
gi 767943731 381 QGRNAKD 387
Cdd:COG3401 457 VLADGGD 463
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
146-219 |
1.16e-05 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.30 E-value: 1.16e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767943731 146 PDDISVRVMSSQSVLVSWVDPVLEKQKKvvasrqYTVRYREKGELARWDYKQI----ANRRVLIENLIPDTVYEFAVR 219
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSWEPPPDDGITG------YIVGYRVEYREEGSEWKEVnvtpSSTSYTLTGLKPGTEYEFRVR 75
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
206-325 |
1.53e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 50.00 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 206 ENLIPDTVYEFAVRISQGERDGKWSTSVFQRTPESAPtTAPENLNVwpVNGKPTVVAASWDalPETEGKVKEYILSYAPA 285
Cdd:COG3401 197 GDIEPGTTYYYRVAATDTGGESAPSNEVSVTTPTTPP-SAPTGLTA--TADTPGSVTLSWD--PVTESDATGYRVYRSNS 271
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 767943731 286 lkpfGAKSLTYPGDT--TSALVDGLQPGERYLFKIRATNRRG 325
Cdd:COG3401 272 ----GDGPFTKVATVttTSYTDTGLTNGTTYYYRVTAVDAAG 309
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
41-127 |
3.48e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 38.63 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 41 PNKPLRVRVRS-SDDRLSVAWKAPRLSGAksprRSRGFLLGYGESGRK--MNYVPLTRDERTHEIKKLASESVYVVSLQS 117
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDGG----PITGYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFRVRA 76
|
90
....*....|
gi 767943731 118 MNSQGRSQPV 127
Cdd:cd00063 77 VNGGGESPPS 86
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1541-1632 |
2.88e-12 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.44 E-value: 2.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEgcHSFVIVDWDK-ATPGDVVTGYLVYsasYEDFIRNKW---STQASSVTHLPIENLKPNTRYYFKVQAQ 1616
Cdd:cd00063 3 PPTNLRVTDVT--STSVTLSWTPpEDDGGPITGYVVE---YREKGSGDWkevEVTPGSETSYTLTGLKPGTEYEFRVRAV 77
|
90
....*....|....*.
gi 767943731 1617 NPHGYGPISPSVSFVT 1632
Cdd:cd00063 78 NGGGESPPSESVTVTT 93
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
245-335 |
5.58e-12 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 63.28 E-value: 5.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKVKEYILSYAPALKPFGAKSLTYPGDTTSALVDGLQPGERYLFKIRATNRR 324
Cdd:cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGG 80
|
90
....*....|.
gi 767943731 325 GLGPHSKAFIV 335
Cdd:cd00063 81 GESPPSESVTV 91
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
245-330 |
7.47e-12 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 62.82 E-value: 7.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKVKEYILSYAPALKPFGAKSLTYPGDTTSALVDGLQPGERYLFKIRATNRR 324
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPPDGNGPITGYEVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVRVQAVNGG 79
|
....*.
gi 767943731 325 GLGPHS 330
Cdd:pfam00041 80 GEGPPS 85
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
515-947 |
3.27e-11 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 68.66 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 515 RPSLPASLNDNDLVDSDEDERAVGSLHPKGAFAQPR----PALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAe 590
Cdd:PHA03307 31 AADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEpptgPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPP- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 591 eDSSASAPPSRLSPPHGGSSrllPTQPHLSSPLSKGGKDGEDAPATNSNAPsrstmsssvsshlssrtqVSEGAEASDGE 670
Cdd:PHA03307 110 -GPSSPDPPPPTPPPASPPP---SPAPDLSEMLRPVGSPGPPPAASPPAAG------------------ASPAAVASDAA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 671 SHGDGdredgGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPSRFSIGRGPRLQPSSSPQSTVPSRAHpRVPSHSDS 750
Cdd:PHA03307 168 SSRQA-----ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAG-ASSSDSSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 751 HPKLSSGIHGDEEDEKPLPATVVNDHVPSSSRQPISRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPqgkySSLAS 830
Cdd:PHA03307 242 SESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSP----RASSS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 831 KAQDVQQSTDADTEGHSPKAQPGStdrhaSPARPPA-ARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAGR 909
Cdd:PHA03307 318 SSSSRESSSSSTSSSSESSRGAAV-----SPGPSPSrSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 767943731 910 SPSQPRL-----SLTQAGRPRPTSQGRSHSSSDPYTASSRGML 947
Cdd:PHA03307 393 AVAGRARrrdatGRFPAGRPRPSPLDAGAASGAFYARYPLLTP 435
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
144-237 |
1.84e-09 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 56.35 E-value: 1.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 144 DVPDDISVRVMSSQSVLVSWvDPVLEKQKKVVasrQYTVRYREKGE--LARWDYKQIANRRVLIENLIPDTVYEFAVRIS 221
Cdd:cd00063 2 SPPTNLRVTDVTSTSVTLSW-TPPEDDGGPIT---GYVVEYREKGSgdWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAV 77
|
90
....*....|....*.
gi 767943731 222 QGERDGKWSTSVFQRT 237
Cdd:cd00063 78 NGGGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
694-1235 |
4.76e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.88 E-value: 4.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 694 RPASGHFhllrhkPFAANG-RSPsrfsiGRGPRLQPSSSPQSTVPSRA-HPRVPSHSDSHPKLSSGIHGDEE---DEKPL 768
Cdd:PHA03247 2482 RPAEARF------PFAAGAaPDP-----GGGGPPDPDAPPAPSRLAPAiLPDEPVGEPVHPRMLTWIRGLEElasDDAGD 2550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 769 PATVVNDHVPSSSrqpisrgwedlrrsPQRGASLHRKEPIPENPKSTGADTHPqgkysslaskaqdvqqstDADTEGHSP 848
Cdd:PHA03247 2551 PPPPLPPAAPPAA--------------PDRSVPPPRPAPRPSEPAVTSRARRP------------------DAPPQSARP 2598
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 849 KAQPGSTDRHASPARPPAARSQQHPsvPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAgrsPSQPRLSLTQagrpRPTS 928
Cdd:PHA03247 2599 RAPVDDRGDPRGPAPPSPLPPDTHA--PDPPPPSPSPAANEPDPHPPPTVPPPERPRDD---PAPGRVSRPR----RARR 2669
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 929 QGRSHSSSDPYTASSRGMLPTALQN----QDEDAQGSYDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGA 1004
Cdd:PHA03247 2670 LGRAAQASSPPQRPRRRAARPTVGSltslADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPA 2749
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1005 GGDHRSQRGHAASPARPSRPGGPQSRARVPSRAAPgksePPSKRPLSSkSQQSVSAEDDEEEDAGFFKGGKEDLLSSSVP 1084
Cdd:PHA03247 2750 TPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT----RPAVASLSE-SRESLPSPWDPADPPAAVLAPAAALPPAASP 2824
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1085 KwPSSSTPRGGKDADGSLAKEEREPAIALaprGGSLAP---VKRPLPPPPGSSPRAShvPSRLPPRSAATVSPVAGTHPW 1161
Cdd:PHA03247 2825 A-GPLPPPTSAQPTAPPPPPGPPPPSLPL---GGSVAPggdVRRRPPSRSPAAKPAA--PARPPVRRLARPAVSRSTESF 2898
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767943731 1162 PQyttraPPGHFSTTPMLSLRQRMMharfRNPLSRQPARPSYRQGYNGRPNVEGKVLPGSNGKPNGQRIINGPQ 1235
Cdd:PHA03247 2899 AL-----PPDQPERPPQPQAPPPPQ----PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPW 2963
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
360-1013 |
8.65e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.11 E-value: 8.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 360 PSSPSPRAPASSQHPSVPAS---PQGRNAKDLLLDLKNKILANGGAPRKPQLRAKKAEELdlqsTEITGEEELGSRED-- 434
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAapdPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRML----TWIRGLEELASDDAgd 2550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 435 -----SPMSPSDTQDQKrtlRPPSRHGHSVVAPGRTAvRARMPALPRRegvdkpgfslATQPR-PGAPPSASASPAHHAS 508
Cdd:PHA03247 2551 pppplPPAAPPAAPDRS---VPPPRPAPRPSEPAVTS-RARRPDAPPQ----------SARPRaPVDDRGDPRGPAPPSP 2616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 509 TQGTSHRPSLPASLNdndlvDSDEDERAVGSLHPKGAFAQPRPALSPSRQSPSSVLRDRS-SVHPGAKPASPARRTPHSG 587
Cdd:PHA03247 2617 LPPDTHAPDPPPPSP-----SPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGrAAQASSPPQRPRRRAARPT 2691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 588 AAEEDSSASAPPsrlsPPHGGSSRLLPTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMSSSvsshlssrTQVSEGAEAS 667
Cdd:PHA03247 2692 VGSLTSLADPPP----PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPA--------TPGGPARPAR 2759
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 668 DGESHGDGDREDGGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPSRFSIGRGPRLQPSSSPQSTV--PSRAHPRVP 745
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLppPTSAQPTAP 2839
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 746 SHSDSHPKLSSGIHGDEEDEKPL----PATVVNDHVPSSSRQPISR-GWEDLRRSPQrgaSLHRKEPIPENPKSTGADTH 820
Cdd:PHA03247 2840 PPPPGPPPPSLPLGGSVAPGGDVrrrpPSRSPAAKPAAPARPPVRRlARPAVSRSTE---SFALPPDQPERPPQPQAPPP 2916
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 821 PQgkysslaskaqdVQQSTDADTEGHSPKAQPGSTDRHASPARPPAARSQQHPSVPR----RMTPGRAPQQQPPPpvats 896
Cdd:PHA03247 2917 PQ------------PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQpwlgALVPGRVAVPRFRV----- 2979
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 897 qhhpgPQSRDAGRSPSQPRLSLTQAGRPRPTSQGRS---HSSSDPYTASSRGMLPTALQNQDEDAQGSYDDDSTEVEAQD 973
Cdd:PHA03247 2980 -----PQPAPSREAPASSTPPLTGHSLSRVSSWASSlalHEETDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEA 3054
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 767943731 974 VRApahaarAKEAAASLPKHQQVESPTGAGAGGDHRSQRG 1013
Cdd:PHA03247 3055 LDP------LPPEPHDPFAHEPDPATPEAGARESPSSQFG 3088
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
807-1236 |
1.02e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 60.57 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 807 PIPENPKSTGADTHPQGKYSSLASKAQDVQQSTDADTEGHSPKAQPGSTD-RHASPARPPAARSQQHPSVPRRMTPGRAP 885
Cdd:PHA03307 78 EAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPpSPAPDLSEMLRPVGSPGPPPAASPPAAGA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 886 QQQPPPPVATSQHHP------GPQSRDAGRSPSQPRLSLTQAGRPRPTSQGRSHSSSDPYTASSrgmlPTALQNQDEDAQ 959
Cdd:PHA03307 158 SPAAVASDAASSRQAalplssPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPA----PAPGRSAADDAG 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 960 GSYDDDSTEVEAQDVRAPAHAARakeaaasLPKHQQVESPT--GAGAGGDHRSQRghaASPARPSrpGGPQSRARVPSRA 1037
Cdd:PHA03307 234 ASSSDSSSSESSGCGWGPENECP-------LPRPAPITLPTriWEASGWNGPSSR---PGPASSS--SSPRERSPSPSPS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1038 APGKSEPPSKRPLSSKSQQSVSAEDDEEEDAGFfkggkedlLSSSVPKWPSSSTPRGGKDADGSlakeerepaialAPRG 1117
Cdd:PHA03307 302 SPGSGPAPSSPRASSSSSSSRESSSSSTSSSSE--------SSRGAAVSPGPSPSRSPSPSRPP------------PPAD 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1118 GSlaPVKRPLPPPPGSSPRASHVPSRLPPRSAATVSPvagthpwpqyttrappghfsttpmlslRQRMMHARFRNPLSRQ 1197
Cdd:PHA03307 362 PS--SPRKRPRPSRAPSSPAASAGRPTRRRARAAVAG---------------------------RARRRDATGRFPAGRP 412
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 767943731 1198 PARPSYRQGYNGRPNVE-------GKVLPGSNGKPNGqRIINGPQG 1236
Cdd:PHA03307 413 RPSPLDAGAASGAFYARyplltpsGEPWPGSPPPPPG-RVRYGGLG 457
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1541-1622 |
4.11e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 52.23 E-value: 4.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEGchSFVIVDWDKAtPGDVVTGYLV-YSASYEDfIRNKWSTQASSV--THLPIENLKPNTRYYFKVQAQN 1617
Cdd:smart00060 3 PPSNLRVTDVTS--TSVTLSWEPP-PDDGITGYIVgYRVEYRE-EGSEWKEVNVTPssTSYTLTGLKPGTEYEFRVRAVN 78
|
....*
gi 767943731 1618 PHGYG 1622
Cdd:smart00060 79 GAGEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1541-1625 |
3.99e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 49.34 E-value: 3.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEgcHSFVIVDWDKATPGD-VVTGYLVYSASYEDFIRNKWSTQASSVTHLPIENLKPNTRYYFKVQAQNPH 1619
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPPDGNgPITGYEVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVRVQAVNGG 79
|
....*.
gi 767943731 1620 GYGPIS 1625
Cdd:pfam00041 80 GEGPPS 85
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
144-230 |
8.89e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.57 E-value: 8.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 144 DVPDDISVRVMSSQSVLVSWvDPVLEKQKKVVasrQYTVRYREKGELARWDYKQIAN--RRVLIENLIPDTVYEFAVRIS 221
Cdd:pfam00041 1 SAPSNLTVTDVTSTSLTVSW-TPPPDGNGPIT---GYEVEYRPKNSGEPWNEITVPGttTSVTLTGLKPGTEYEVRVQAV 76
|
....*....
gi 767943731 222 QGERDGKWS 230
Cdd:pfam00041 77 NGGGEGPPS 85
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
245-327 |
9.76e-07 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 48.38 E-value: 9.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 245 APENLNVWPVNgkPTVVAASWDALPETEGKvkEYILSYAPALKPFGA--KSLTYPGDTTSALVDGLQPGERYLFKIRATN 322
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGIT--GYIVGYRVEYREEGSewKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVN 78
|
....*
gi 767943731 323 RRGLG 327
Cdd:smart00060 79 GAGEG 83
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
146-387 |
1.85e-06 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 52.70 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 146 PDDISVRVMSSQSVLVSWvDPVLEKqkkvvASRQYTVrYREKGELARWdyKQIANRRVLI---ENLIPDTVYEFAVR--I 220
Cdd:COG3401 236 PTGLTATADTPGSVTLSW-DPVTES-----DATGYRV-YRSNSGDGPF--TKVATVTTTSytdTGLTNGTTYYYRVTavD 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 221 SQGERdGKWSTSVfQRTPESAPTTAPENLNVwpVNGKPTVVAASWDalPETEGKVKEYILSYAPAlKPFGAKSLTYPGDT 300
Cdd:COG3401 307 AAGNE-SAPSNVV-SVTTDLTPPAAPSGLTA--TAVGSSSITLSWT--ASSDADVTGYNVYRSTS-GGGTYTKIAETVTT 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 301 TSALVDGLQPGERYLFKIRATNRRGLGPHSKAFIVAMPTTskaDVEQNTEDNGKPEKPEPSSPSPRAPASSQHPSVPASP 380
Cdd:COG3401 380 TSYTDTGLTPGTTYYYKVTAVDAAGNESAPSEEVSATTAS---AASGESLTASVDAVPLTDVAGATAAASAASNPGVSAA 456
|
....*..
gi 767943731 381 QGRNAKD 387
Cdd:COG3401 457 VLADGGD 463
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
353-732 |
4.33e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.10 E-value: 4.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 353 GKPEKPEPSSPSPRAPassqhPSVPASPQGRNAKDLLLDLKnkilANGGAPRKPQLRAKKAEELDLQSTEITGEeelgSR 432
Cdd:PHA03307 104 GSPTPPGPSSPDPPPP-----TPPPASPPPSPAPDLSEMLR----PVGSPGPPPAASPPAAGASPAAVASDAAS----SR 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 433 EDSPMSPSdTQDQKRTLRPPSRHGHSVVAPGRTAVRARMPALPRREGVDKPGFSLATQPRPGAPPSASASPAHHASTQGT 512
Cdd:PHA03307 171 QAALPLSS-PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGW 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 513 SHRPSLPASLNDNDLVDSDEDERAVGSLHPkgafaqPRPALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAEED 592
Cdd:PHA03307 250 GPENECPLPRPAPITLPTRIWEASGWNGPS------SRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRE 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 593 SSASAPPSRLSPPHGGSSRllPTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMSSSVSSHLSSRTQVSEGAEASDGesh 672
Cdd:PHA03307 324 SSSSSTSSSSESSRGAAVS--PGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRA--- 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 673 gdgdredggRQAEATAQTLRARPASGhfhllrhkPFAANGRSPSRFSigRGPRLQPSSSP 732
Cdd:PHA03307 399 ---------RRRDATGRFPAGRPRPS--------PLDAGAASGAFYA--RYPLLTPSGEP 439
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
146-219 |
1.16e-05 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.30 E-value: 1.16e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767943731 146 PDDISVRVMSSQSVLVSWVDPVLEKQKKvvasrqYTVRYREKGELARWDYKQI----ANRRVLIENLIPDTVYEFAVR 219
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSWEPPPDDGITG------YIVGYRVEYREEGSEWKEVnvtpSSTSYTLTGLKPGTEYEFRVR 75
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1535-1637 |
1.51e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 50.00 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1535 DLPPQHAPRNITVVAVEGchSFVIVDWDKATPGDVvTGYLVYSASYEDFIRNKWSTQASSVTHLpIENLKPNTRYYFKVQ 1614
Cdd:COG3401 323 DLTPPAAPSGLTATAVGS--SSITLSWTASSDADV-TGYNVYRSTSGGGTYTKIAETVTTTSYT-DTGLTPGTTYYYKVT 398
|
90 100
....*....|....*....|....
gi 767943731 1615 AQNPHG-YGPISPSVSFVTESDNP 1637
Cdd:COG3401 399 AVDAAGnESAPSEEVSATTASAAS 422
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
206-325 |
1.53e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 50.00 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 206 ENLIPDTVYEFAVRISQGERDGKWSTSVFQRTPESAPtTAPENLNVwpVNGKPTVVAASWDalPETEGKVKEYILSYAPA 285
Cdd:COG3401 197 GDIEPGTTYYYRVAATDTGGESAPSNEVSVTTPTTPP-SAPTGLTA--TADTPGSVTLSWD--PVTESDATGYRVYRSNS 271
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 767943731 286 lkpfGAKSLTYPGDT--TSALVDGLQPGERYLFKIRATNRRG 325
Cdd:COG3401 272 ----GDGPFTKVATVttTSYTDTGLTNGTTYYYRVTAVDAAG 309
|
|
| COG4733 |
COG4733 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
155-351 |
3.51e-05 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 48.79 E-value: 3.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 155 SSQSVLVSWVDPVlekqkkvVASRqYTVRYREKGElaRWDYKQIANRRVLIENLIPDTVYEFAVR-ISQGERDGKWSTSV 233
Cdd:COG4733 550 AVTTLTVSWDAPA-------GAVA-YEVEWRRDDG--NWVSVPRTSGTSFEVPGIYAGDYEVRVRaINALGVSSAWAASS 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 234 -FQRTPESAPTTAPENLNVWPVNGKptvVAASWDALPETEgkVKEYILSYAPALKPFGAKSLTYPGDTTSALVDGLQPGE 312
Cdd:COG4733 620 eTTVTGKTAPPPAPTGLTATGGLGG---ITLSWSFPVDAD--TLRTEIRYSTTGDWASATVAQALYPGNTYTLAGLKAGQ 694
|
170 180 190
....*....|....*....|....*....|....*....
gi 767943731 313 RYLFKIRATNRRGLgpHSKAFIVAMPTTSKADVEQNTED 351
Cdd:COG4733 695 TYYYRARAVDRSGN--VSAWWVSGQASADAAGILDAITG 731
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
724-1159 |
7.67e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 7.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 724 PRLQPSSSPQSTVPSRAHPRVP--------SHSDSHPKLSSG-IHGDEEDEKPLPAtvvndhvPSSSRQPISRGWEDLRR 794
Cdd:PHA03247 2557 PAAPPAAPDRSVPPPRPAPRPSepavtsraRRPDAPPQSARPrAPVDDRGDPRGPA-------PPSPLPPDTHAPDPPPP 2629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 795 SPQRGASLHRKEPIPENPKSTGADTHPQGKYSSLASKAQDVQQSTDAD--TEGHSPKAQPGSTDRHASPARPPAARSQQH 872
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASspPQRPRRRAARPTVGSLTSLADPPPPPPTPE 2709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 873 PSvPRRMTPGRAPQQQPPPPVATSQHHP-GPQSRDAGRSPSQPRLSLTQAGRPRPTSQGRSHSSSDPYTASSRGMLPTAL 951
Cdd:PHA03247 2710 PA-PHALVSATPLPPGPAAARQASPALPaAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAV 2788
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 952 QNQDEDAQGSYDDDSTEVEAQDVRAPAHAARAKEAAASL----PKHQQVESPTGAGAGGDHRSQRGHAAsparpsrPGGP 1027
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPlpppTSAQPTAPPPPPGPPPPSLPLGGSVA-------PGGD 2861
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1028 QSRaRVPSRAAPGKSEPPSK-------RPLSSKSQQSVSAEDDEEEDAGFFKGGKEDLLSSSVPKWPSSSTPRGGKDADG 1100
Cdd:PHA03247 2862 VRR-RPPSRSPAAKPAAPARppvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQ 2940
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 767943731 1101 SLAKEEREPAIALAPRGGSLAPVKRPLPPPPGSSPRaSHVPSRLPPRSAATVSPVAGTH 1159
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPR-FRVPQPAPSREAPASSTPPLTG 2998
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
355-927 |
1.14e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 355 PEKPEPSSPSP-RAPASSQHPSVPASPQ-GRNAKDLLLDlknkilANGGAPRKPQLRakkaeeldlqsTEITGEEELGSR 432
Cdd:PHA03247 2484 AEARFPFAAGAaPDPGGGGPPDPDAPPApSRLAPAILPD------EPVGEPVHPRML-----------TWIRGLEELASD 2546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 433 ED-------SPMSPSDTQDQKRtlrPPSRHGHSVVAPGRTAvRARMPALPRREgvdkpgfslaTQPR-PGAPPSASASPA 504
Cdd:PHA03247 2547 DAgdpppplPPAAPPAAPDRSV---PPPRPAPRPSEPAVTS-RARRPDAPPQS----------ARPRaPVDDRGDPRGPA 2612
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 505 HHASTQGTSHRPSLPASLNDndlvdSDEDERAVGSLHPKGAFAQPRPALSPSRQSPSSVLRDRS-SVHPGAKPASPARRT 583
Cdd:PHA03247 2613 PPSPLPPDTHAPDPPPPSPS-----PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGrAAQASSPPQRPRRRA 2687
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 584 PHSGAAEEDSSASAPPsrlsPPHGGSSRLLPTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMsssvsshlssrTQVSEG 663
Cdd:PHA03247 2688 ARPTVGSLTSLADPPP----PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA-----------GPATPG 2752
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 664 AEASdgeshgdgdredggrqaeataqtlRARPASghfhllrhkPFAANGRSPSRFSIGRGPRLQPSSSPQSTVPSRAHPR 743
Cdd:PHA03247 2753 GPAR------------------------PARPPT---------TAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP 2799
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 744 VPSHSDSHPKLSSGIHGDEEDEK----PLPATVVNDHVPSSSRQPISRGWEDLRRSPQRGASLHRKEPIPENPKSTGADT 819
Cdd:PHA03247 2800 SPWDPADPPAAVLAPAAALPPAAspagPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPA 2879
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 820 HPqgKYSSLASKAqdVQQSTDadteghsPKAQPGStdrhaSPARPPAARSQQHPsvprrmtpgrapqqqPPPPVATSQHH 899
Cdd:PHA03247 2880 RP--PVRRLARPA--VSRSTE-------SFALPPD-----QPERPPQPQAPPPP---------------QPQPQPPPPPQ 2928
|
570 580
....*....|....*....|....*...
gi 767943731 900 PGPQSRDAGRSPSQPRLSLTQAGRPRPT 927
Cdd:PHA03247 2929 PQPPPPPPPRPQPPLAPTTDPAGAGEPS 2956
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1537-1637 |
7.79e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 44.22 E-value: 7.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1537 PPQhAPRNITVVAVEgcHSFVIVDWDKATPGDVvTGYLVYSASYEDfirNKWS----TQASSVTHlpiENLKPNTRYYFK 1612
Cdd:COG3401 232 PPS-APTGLTATADT--PGSVTLSWDPVTESDA-TGYRVYRSNSGD---GPFTkvatVTTTSYTD---TGLTNGTTYYYR 301
|
90 100
....*....|....*....|....*.
gi 767943731 1613 VQAQNPHG-YGPISPSVSFVTESDNP 1637
Cdd:COG3401 302 VTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
470-865 |
1.01e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 470 RMPALPRREGVDKPGFSLATQPRPgappsasaspahhastqgtshRPSLPASLNDNDLVDSDEDERAVGSLHPKGAFAQP 549
Cdd:PHA03307 95 LAPASPAREGSPTPPGPSSPDPPP---------------------PTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPP 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 550 RPALSPSRqspssvlrdrssvhPGAKPASPARRTPHSGAAEEDSSASAPPSRLSPPHGGSSRLLPTQPHLSSPLSKGGKD 629
Cdd:PHA03307 154 AAGASPAA--------------VASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 630 GEDAPATNSNAPsrstmsssvsshlssRTQVSEGAEASDGESHGDGDREDGGRQAEATAQTLRARPASGHFHLLRHKPFA 709
Cdd:PHA03307 220 PAPAPGRSAADD---------------AGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGP 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 710 ANGRSPSRfsiGRGPRLQPSSSPQSTVPSRaHPRVPSHSDSHPKLSSGIHGDEEDEKPLPATVVNDHVPSSSRQPiSRGW 789
Cdd:PHA03307 285 ASSSSSPR---ERSPSPSPSSPGSGPAPSS-PRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSR-PPPP 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767943731 790 EDLRRSPQRGASlhrkEPIPENPKSTGADTHPQGKYSSLASKAqdVQQSTDADTEGHSPKAQPGSTDRHAS--PARPP 865
Cdd:PHA03307 360 ADPSSPRKRPRP----SRAPSSPAASAGRPTRRRARAAVAGRA--RRRDATGRFPAGRPRPSPLDAGAASGafYARYP 431
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
534-977 |
1.85e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 534 ERAVGSLHPKGAFAQPRPALSPSRQSPSSvlrdrssvhPGAKPASPARRTPHSGAAEEDSSASAPPSRLSPPHGGSSRLL 613
Cdd:PRK07764 379 ERLERRLGVAGGAGAPAAAAPSAAAAAPA---------AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 614 PTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMSSSVSSHLSSRTQVSEGAEASDGESHGDGDRE--DGGRQA--EATAQ 689
Cdd:PRK07764 450 AGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRErwPEILAAvpKRSRK 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 690 TLRARPASGHFHLLR--------HKPFAANgrspsRFSIGRGPR-----LQPSSSPQSTVPSRAHPRVPSHSDSHPKLSS 756
Cdd:PRK07764 530 TWAILLPEATVLGVRgdtlvlgfSTGGLAR-----RFASPGNAEvlvtaLAEELGGDWQVEAVVGPAPGAAGGEGPPAPA 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 757 GIHGDEEDEKPLPATVVNDHVPSSSRQPISRGWEDLRRSPQRGASlhrKEPIPENPKSTGADTHPQGKYSSLASKAQDVQ 836
Cdd:PRK07764 605 SSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAA---PEHHPKHVAVPDASDGGDGWPAKAGGAAPAAP 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 837 QSTDADTEGHSPKAQPGSTDRHASPARPPAARSQQHPSVPRRmtpgrapqqqppppVATSQHHPGPQSRDAGRSPSQPRL 916
Cdd:PRK07764 682 PPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQ--------------AAQGASAPSPAADDPVPLPPEPDD 747
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767943731 917 sltQAGRPRPTSQGRSHSSSDPYTASSRGMLPTALqnqdEDAQGSYDDDSTEVEAQDVRAP 977
Cdd:PRK07764 748 ---PPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP----SEEEEMAEDDAPSMDDEDRRDA 801
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
850-1068 |
1.85e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 850 AQPGSTDRHASPARPPAARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAGRSPSQPRLSLTQAGRPRPTSQ 929
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDG 665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 930 GrshsssDPYTASSRGMLPTALQNQDEDAQGsyDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGAGGDHR 1009
Cdd:PRK07764 666 G------DGWPAKAGGAAPAAPPPAPAPAAP--AAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADD 737
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 767943731 1010 SQRGHAAsPARPSRPGGPQSRARVPSRAAPGKSEPPSKRPlSSKSQQSVSAEDDEEEDA 1068
Cdd:PRK07764 738 PVPLPPE-PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP-SPPSEEEEMAEDDAPSMD 794
|
|
| Pur_ac_phosph_N |
pfam16656 |
Purple acid Phosphatase, N-terminal domain; This domain is found at the N-terminus of Purple ... |
1557-1632 |
2.34e-03 |
|
Purple acid Phosphatase, N-terminal domain; This domain is found at the N-terminus of Purple acid phosphatase proteins.
Pssm-ID: 465220 [Multi-domain] Cd Length: 93 Bit Score: 38.93 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1557 VIVDWdkATPGDVVTGYLVYSASYEDfirNKWSTQASSVT------------HLPIENLKPNTRYYFKVQAQNphgyGPI 1624
Cdd:pfam16656 15 MTVSW--VTPSAVTSPVVQYGTSSSA---LTSTATATSSTyttgdggtgyihRATLTGLEPGTTYYYRVGDDN----GGW 85
|
....*...
gi 767943731 1625 SPSVSFVT 1632
Cdd:pfam16656 86 SEVYSFTT 93
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
41-127 |
3.48e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 38.63 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 41 PNKPLRVRVRS-SDDRLSVAWKAPRLSGAksprRSRGFLLGYGESGRK--MNYVPLTRDERTHEIKKLASESVYVVSLQS 117
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDGG----PITGYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFRVRA 76
|
90
....*....|
gi 767943731 118 MNSQGRSQPV 127
Cdd:cd00063 77 VNGGGESPPS 86
|
|
| COG3979 |
COG3979 |
Chitodextrinase [Carbohydrate transport and metabolism]; |
1541-1654 |
5.12e-03 |
|
Chitodextrinase [Carbohydrate transport and metabolism];
Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 41.30 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 1541 APRNITVVAVEGchSFVIVDWDKATPGDVVTGYLVYSASyedfirNKWSTQASSVTHLpIENLKPNTRYYFKVQAQNPHG 1620
Cdd:COG3979 5 APTGLTASNVTS--SSVSLSWDASTDNVGVTGYDVYRGG------DQVATVTGLTAWT-VTGLTPGTEYTFTVGACDAAG 75
|
90 100 110
....*....|....*....|....*....|....
gi 767943731 1621 YGPISPSVSFVTESDNPLLVVRPPGGEPIWIPFA 1654
Cdd:COG3979 76 NVSAASGTSTAMFGGSSTTLGSAEGVADTSGNLA 109
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
459-695 |
8.26e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 8.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 459 VVAPGRTAVRARMPALPRREGVDKPGFSLATQPRPGappsasaspAHHASTQGTSHRPSLPASLNDNDLVDSDEDERAVG 538
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPA---------APAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHV 657
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 539 SLHPKGAFAQPRPALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAEEDSSASAPPSRLSPPHGGSSRLLPTQPH 618
Cdd:PRK07764 658 AVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADD 737
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943731 619 LSSPLSKGGKDGEDAPATNSNAPSRSTMSSSVSSHLSSRTQVSEGAEA--SDGESHGDGDREDGGRQA-EATAQTLRARP 695
Cdd:PRK07764 738 PVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMaeDDAPSMDDEDRRDAEEVAmELLEEELGAKK 817
|
|
| |
