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Conserved domains on  [gi|768031631|ref|XP_011529041|]
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serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X19 [Homo sapiens]

Protein Classification

SAPS family protein( domain architecture ID 10517350)

SAPS (SIT4-associating proteins) family protein

Gene Ontology:  GO:0019888|GO:0043666
PubMed:  8649382

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-533 2.69e-158

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


:

Pssm-ID: 398279  Cd Length: 383  Bit Score: 470.57  E-value: 2.69e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  128 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  208 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESrQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGL 287
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVS-EESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPV 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  288 VDSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI 362
Cdd:pfam04499 158 QLLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  363 NQE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQ 433
Cdd:pfam04499 238 LNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  434 paaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCR 513
Cdd:pfam04499 293 ------NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---EN 363

                         410       420
                  ....*....|....*....|
gi 768031631  514 GRWESFVEETLTETNRRNTV 533
Cdd:pfam04499 364 EEWEEYVEETLEETRERYNV 383
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 702-963 1.29e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 52.63  E-value: 1.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  702 APPVEGDSEAGAMWTAVFDEPANSTPTAPGVV---RDVGSSVWAAGTSAPEEkgwakftdfqpfccsesGPRCSSPVDTE 778
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQ-----------------RPRRRAARPTV 2692

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  779 CSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPP 856
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  857 LPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALAVAVPLGPIMAV 936
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPS 2849

                         250       260
                  ....*....|....*....|....*..
gi 768031631  937 TAAPAMVATLGTVTKDGKTDAPPEGAA 963
Cdd:PHA03247 2850 LPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-533 2.69e-158

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 470.57  E-value: 2.69e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  128 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  208 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESrQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGL 287
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVS-EESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPV 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  288 VDSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI 362
Cdd:pfam04499 158 QLLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  363 NQE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQ 433
Cdd:pfam04499 238 LNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  434 paaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCR 513
Cdd:pfam04499 293 ------NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---EN 363

                         410       420
                  ....*....|....*....|
gi 768031631  514 GRWESFVEETLTETNRRNTV 533
Cdd:pfam04499 364 EEWEEYVEETLEETRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
 702-963 1.29e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 52.63  E-value: 1.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  702 APPVEGDSEAGAMWTAVFDEPANSTPTAPGVV---RDVGSSVWAAGTSAPEEkgwakftdfqpfccsesGPRCSSPVDTE 778
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQ-----------------RPRRRAARPTV 2692

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  779 CSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPP 856
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  857 LPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALAVAVPLGPIMAV 936
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPS 2849

                         250       260
                  ....*....|....*....|....*..
gi 768031631  937 TAAPAMVATLGTVTKDGKTDAPPEGAA 963
Cdd:PHA03247 2850 LPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 723-968 2.02e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 41.87  E-value: 2.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  723 ANSTPTAPgVVRDVGSsvWAAGTSAPEekgwakftdfqpfCCSESGPRC---SSPVDTECShAEGSRSQGPEKASQASYF 799
Cdd:pfam17823  62 AATAAPAP-VTLTKGT--SAAHLNSTE-------------VTAEHTPHGtdlSEPATREGA-ADGAASRALAAAASSSPS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  800 AVSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 879
Cdd:pfam17823 125 SAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPA 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  880 PACPAPKEVTAAPAVAVPpeatvAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDG------ 953
Cdd:pfam17823 205 TLTPARGISTAATATGHP-----AAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGdpharr 279

                         250       260
                  ....*....|....*....|....*...
gi 768031631  954 -------------KTDAPPEGAALNGPV 968
Cdd:pfam17823 280 lspakhmpsdtmaRNPAAPMGAQAQGPI 307
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 128-533 2.69e-158

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 470.57  E-value: 2.69e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  128 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  208 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESrQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGL 287
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVS-EESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPV 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  288 VDSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI 362
Cdd:pfam04499 158 QLLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  363 NQE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQ 433
Cdd:pfam04499 238 LNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  434 paaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCR 513
Cdd:pfam04499 293 ------NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---EN 363

                         410       420
                  ....*....|....*....|
gi 768031631  514 GRWESFVEETLTETNRRNTV 533
Cdd:pfam04499 364 EEWEEYVEETLEETRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
 702-963 1.29e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 52.63  E-value: 1.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  702 APPVEGDSEAGAMWTAVFDEPANSTPTAPGVV---RDVGSSVWAAGTSAPEEkgwakftdfqpfccsesGPRCSSPVDTE 778
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQ-----------------RPRRRAARPTV 2692

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  779 CSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPP 856
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  857 LPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALAVAVPLGPIMAV 936
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPS 2849

                         250       260
                  ....*....|....*....|....*..
gi 768031631  937 TAAPAMVATLGTVTKDGKTDAPPEGAA 963
Cdd:PHA03247 2850 LPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
802-964 1.66e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 1.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 802 SPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 879
Cdd:PRK12323 373 GPATAAAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 880 PACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSA-----LAVAVPLGPIMAVTAAPAMVATLGTvTKDGK 954
Cdd:PRK12323 453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPppweeLPPEFASPAPAQPDAAPAGWVAESI-PDPAT 531

                        170
                 ....*....|
gi 768031631 955 TDAPPEGAAL 964
Cdd:PRK12323 532 ADPDDAFETL 541
PHA02682 PHA02682
ORF080 virion core protein; Provisional
 837-941 1.05e-04

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 45.24  E-value: 1.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 837 QKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCAdsrllsPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIP 916
Cdd:PHA02682  63 QSRLKANSACMQRPSGQSPLAPSPACAAPAPACPACA------PAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARP 136

                         90       100
                 ....*....|....*....|....*
gi 768031631 917 TPAVSSALAVAVPLGPIMAVTAAPA 941
Cdd:PHA02682 137 APACPPSTRQCPPAPPLPTPKPAPA 161
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
845-945 9.52e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 43.30  E-value: 9.52e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 845 AVSRGPGREAPPLPTVARTEEAVGRVgcADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSAL 924
Cdd:PRK07003 361 AVTGGGAPGGGVPARVAGAVPAPGAR--AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                         90       100
                 ....*....|....*....|.
gi 768031631 925 AVAVPLGPIMAVTAAPAMVAT 945
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASA 459
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
839-963 1.77e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.14  E-value: 1.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 839 AASAMDAVSRGPGREAPPlptVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTP 918
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAP---PAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP 485

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 768031631 919 AvSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAA 963
Cdd:PRK07003 486 P-DAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPA 529
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 879-968 1.97e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 879 SPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAP 958
Cdd:PRK14950 370 KPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAP 449

                         90
                 ....*....|..
gi 768031631 959 P--EGAALNGPV 968
Cdd:PRK14950 450 PkeEEKALIADG 461
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 723-968 2.02e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 41.87  E-value: 2.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  723 ANSTPTAPgVVRDVGSsvWAAGTSAPEekgwakftdfqpfCCSESGPRC---SSPVDTECShAEGSRSQGPEKASQASYF 799
Cdd:pfam17823  62 AATAAPAP-VTLTKGT--SAAHLNSTE-------------VTAEHTPHGtdlSEPATREGA-ADGAASRALAAAASSSPS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  800 AVSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 879
Cdd:pfam17823 125 SAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPA 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  880 PACPAPKEVTAAPAVAVPpeatvAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDG------ 953
Cdd:pfam17823 205 TLTPARGISTAATATGHP-----AAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGdpharr 279

                         250       260
                  ....*....|....*....|....*...
gi 768031631  954 -------------KTDAPPEGAALNGPV 968
Cdd:pfam17823 280 lspakhmpsdtmaRNPAAPMGAQAQGPI 307
PHA03247 PHA03247
large tegument protein UL36; Provisional
 722-967 2.11e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 2.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  722 PANSTPTAPGVVRDvGSSVWAAGTSAPEEKGWAKFTDFQP----FCCSESGPRCSSPVDTECSHAEGSRSQGPEKASQAS 797
Cdd:PHA03247 2593 PQSARPRAPVDDRG-DPRGPAPPSPLPPDTHAPDPPPPSPspaaNEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG 2671

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  798 YFAVSPASPCAWnvcvTRKA--PLLASdssssggshsedgdqkAASAMDAVSRGPGREAPPLPTVARTEEAVGRvgcADS 875
Cdd:PHA03247 2672 RAAQASSPPQRP----RRRAarPTVGS----------------LTSLADPPPPPPTPEPAPHALVSATPLPPGP---AAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631  876 RLLSPACPApkevtaAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKT 955
Cdd:PHA03247 2729 RQASPALPA------APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPW 2802

                         250
                  ....*....|..
gi 768031631  956 DAPPEGAALNGP 967
Cdd:PHA03247 2803 DPADPPAAVLAP 2814
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
849-968 9.88e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.86  E-value: 9.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031631 849 GPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAV 928
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 768031631 929 PLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAALNGPV 968
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPA 486
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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