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Conserved domains on  [gi|755506362|ref|XP_011248312|]
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HAUS augmin-like complex subunit 6 isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HAUS6_N super family cl24273
HAUS augmin-like complex subunit 6 N-terminus; This family includes the N-terminus of HAUS ...
 13-99 4.24e-20

HAUS augmin-like complex subunit 6 N-terminus; This family includes the N-terminus of HAUS augmin-like complex subunit 6. The HAUS augmin-like complex contributes to mitotic spindle assembly, maintenance of chromosome integrity and completion of cytokinesis.


The actual alignment was detected with superfamily member pfam14661:

Pssm-ID: 464244 [Multi-domain]  Cd Length: 233  Bit Score: 90.02  E-value: 4.24e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755506362   13 ETFNVKPQDMHKCL-ARSHVARNRFLQILQREHYVMQKYQENVNLSVKQVRNARSECMSLQNQIKRMEPYDEK-----SN 86
Cdd:pfam14661 141 ALENRGYSGEQAELaALILAHRSSLLRILEEKDALIQKYQQFAQLLVKKIRALRAEREKLDALLKKMEKDNRSrsaeqDA 220

                          90
                  ....*....|...
gi 755506362   87 TQEKIQKVRSLWA 99
Cdd:pfam14661 221 LQEKIDKVRNLWS 233
 
Name Accession Description Interval E-value
HAUS6_N pfam14661
HAUS augmin-like complex subunit 6 N-terminus; This family includes the N-terminus of HAUS ...
 13-99 4.24e-20

HAUS augmin-like complex subunit 6 N-terminus; This family includes the N-terminus of HAUS augmin-like complex subunit 6. The HAUS augmin-like complex contributes to mitotic spindle assembly, maintenance of chromosome integrity and completion of cytokinesis.


Pssm-ID: 464244 [Multi-domain]  Cd Length: 233  Bit Score: 90.02  E-value: 4.24e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755506362   13 ETFNVKPQDMHKCL-ARSHVARNRFLQILQREHYVMQKYQENVNLSVKQVRNARSECMSLQNQIKRMEPYDEK-----SN 86
Cdd:pfam14661 141 ALENRGYSGEQAELaALILAHRSSLLRILEEKDALIQKYQQFAQLLVKKIRALRAEREKLDALLKKMEKDNRSrsaeqDA 220

                          90
                  ....*....|...
gi 755506362   87 TQEKIQKVRSLWA 99
Cdd:pfam14661 221 LQEKIDKVRNLWS 233
 
Name Accession Description Interval E-value
HAUS6_N pfam14661
HAUS augmin-like complex subunit 6 N-terminus; This family includes the N-terminus of HAUS ...
 13-99 4.24e-20

HAUS augmin-like complex subunit 6 N-terminus; This family includes the N-terminus of HAUS augmin-like complex subunit 6. The HAUS augmin-like complex contributes to mitotic spindle assembly, maintenance of chromosome integrity and completion of cytokinesis.


Pssm-ID: 464244 [Multi-domain]  Cd Length: 233  Bit Score: 90.02  E-value: 4.24e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755506362   13 ETFNVKPQDMHKCL-ARSHVARNRFLQILQREHYVMQKYQENVNLSVKQVRNARSECMSLQNQIKRMEPYDEK-----SN 86
Cdd:pfam14661 141 ALENRGYSGEQAELaALILAHRSSLLRILEEKDALIQKYQQFAQLLVKKIRALRAEREKLDALLKKMEKDNRSrsaeqDA 220

                          90
                  ....*....|...
gi 755506362   87 TQEKIQKVRSLWA 99
Cdd:pfam14661 221 LQEKIDKVRNLWS 233
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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