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Conserved domains on  [gi|741921753|ref|XP_010801907|]
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nuclear autoantigenic sperm protein isoform X3 [Bos taurus]

Protein Classification

TPR_12 and SHNi-TPR domain-containing protein( domain architecture ID 12139966)

TPR_12 and SHNi-TPR domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
 204-241 3.64e-09

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


:

Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 52.07  E-value: 3.64e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 741921753  204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAH 241
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
202-278 1.10e-07

Tetratricopeptide repeat;


:

Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 48.92  E-value: 1.10e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921753  202 YAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK 278
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
 
Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
 204-241 3.64e-09

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 52.07  E-value: 3.64e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 741921753  204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAH 241
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
202-278 1.10e-07

Tetratricopeptide repeat;


Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 48.92  E-value: 1.10e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921753  202 YAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK 278
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 178-274 4.72e-07

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 52.30  E-value: 4.72e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 178 ELAWDMLDLAKIIFKRQDTKEA-QLYA---------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllae 247
Cdd:COG3914  110 DNAEALFNLGNLLLALGRLEEAlAALRralalnpdfAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEA------- 182

                         90       100
                 ....*....|....*....|....*..
gi 741921753 248 tHYQLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG3914  183 -LNNLGNALQDLGRLEEAIAAYRRALE 208
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
204-274 1.76e-05

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 45.68  E-value: 1.76e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921753 204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRllaethyqLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG4785  107 AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLN--------RGIALYYLGRYELAIADLEKALE 169
PRK02603 PRK02603
photosystem I assembly protein Ycf3; Provisional
 186-284 4.58e-03

photosystem I assembly protein Ycf3; Provisional


Pssm-ID: 179448 [Multi-domain]  Cd Length: 172  Bit Score: 37.73  E-value: 4.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 186 LAKIIFK----RQDTKEAQLY-----AAQAHlklGEvsvesenYLQAVEEFQACLNLQEqylEAHDRllAETHYQLGLAY 256
Cdd:PRK02603  18 MADLILKilpiNKKAKEAFVYyrdgmSAQAD---GE-------YAEALENYEEALKLEE---DPNDR--SYILYNMGIIY 82

                         90       100
                 ....*....|....*....|....*...
gi 741921753 257 GYNSQYDEAVAQFSKSIEVIEKRMAVLN 284
Cdd:PRK02603  83 ASNGEHDKALEYYHQALELNPKQPSALN 110
 
Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
 204-241 3.64e-09

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 52.07  E-value: 3.64e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 741921753  204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAH 241
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
202-278 1.10e-07

Tetratricopeptide repeat;


Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 48.92  E-value: 1.10e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921753  202 YAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK 278
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 178-274 4.72e-07

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 52.30  E-value: 4.72e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 178 ELAWDMLDLAKIIFKRQDTKEA-QLYA---------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllae 247
Cdd:COG3914  110 DNAEALFNLGNLLLALGRLEEAlAALRralalnpdfAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEA------- 182

                         90       100
                 ....*....|....*....|....*..
gi 741921753 248 tHYQLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG3914  183 -LNNLGNALQDLGRLEEAIAAYRRALE 208
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
133-274 6.89e-07

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 49.91  E-value: 6.89e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 133 NDNIDETEGSEEEDKENDKAEETLNDSALENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGE 212
Cdd:COG4785    2 YALALALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGV 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 741921753 213 VSVESENYLQAVEEFQACLNLQEQYleahdrllAETHYQLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG4785   82 AYDSLGDYDLAIADFDQALELDPDL--------AEAYNNRGLAYLLLGDYDAALEDFDRALE 135
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
204-274 1.76e-05

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 45.68  E-value: 1.76e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921753 204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRllaethyqLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG4785  107 AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLN--------RGIALYYLGRYELAIADLEKALE 169
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
204-274 7.63e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 41.15  E-value: 7.63e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921753 204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYleahdrllAETHYQLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG0457    8 AEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDD--------AEALYNLGLAYLRLGRYEEALADYEQALE 70
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
204-274 1.31e-03

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 40.38  E-value: 1.31e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921753 204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYleahdrllAETHYQLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG0457   42 AEALYNLGLAYLRLGRYEEALADYEQALELDPDD--------AEALNNLGLALQALGRYEEALEDYDKALE 104
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 144-290 2.19e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 39.71  E-value: 2.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 144 EEDKENDKAEETLNdsalenKSLQENEEEEIGNLELAwdmldlaKIIFKRQDTKEAQLYAAQA----------HLKLGEV 213
Cdd:COG2956  121 EQEGDWEKAIEVLE------RLLKLGPENAHAYCELA-------ELYLEQGDYDEAIEALEKAlkldpdcaraLLLLAEL 187

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921753 214 SVESENYLQAVEEFQACLNLQEQYLEAHDRlLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEKRMAVLNEQMKEA 290
Cdd:COG2956  188 YLEQGDYEEAIAALERALEQDPDYLPALPR-LAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEGLEA 263
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
204-274 3.20e-03

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 39.22  E-value: 3.20e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921753 204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRlLAETHYQLGlaygynsQYDEAVAQFSKSIE 274
Cdd:COG0457   76 AEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYN-LGLALLELG-------RYDEAIEAYERALE 138
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 178-274 3.33e-03

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 37.86  E-value: 3.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 178 ELAWDMLDLAKIIFKRQDTKEAQLYA----------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllae 247
Cdd:COG4783    2 ACAEALYALAQALLLAGDYDEAEALLekaleldpdnPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEA------- 74

                         90       100
                 ....*....|....*....|....*..
gi 741921753 248 tHYQLGLAYGYNSQYDEAVAQFSKSIE 274
Cdd:COG4783   75 -RLNLGLALLKAGDYDEALALLEKALK 100
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
 204-290 3.61e-03

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 37.68  E-value: 3.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 204 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllaetHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK--RMA 281
Cdd:COG4235   51 ADALLDLAEALLAAGDTEEAEELLERALALDPDNPEA--------LYLLGLAAFQQGDYAEAIAAWQKLLALLPAdaPAR 122


                 ....*....
gi 741921753 282 VLNEQMKEA 290
Cdd:COG4235  123 LLEASIAEA 131
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 148-291 4.20e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 38.94  E-value: 4.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 148 ENDKAEETLNDsALENKSLQENEEEEIGNLELAWDMLDLAKIIFKRqdTKEAQLYAAQAHLKLGEVSVESENYLQAVEEF 227
Cdd:COG2956   23 QPDKAIDLLEE-ALELDPETVEAHLALGNLYRRRGEYDRAIRIHQK--LLERDPDRAEALLELAQDYLKAGLLDRAEELL 99

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 741921753 228 QACLNLQEQYLEAHdRLLAETHYQLGlaygynsQYDEAVAQFSKSIEVIEKRMAVLNEQMKEAE 291
Cdd:COG2956  100 EKLLELDPDDAEAL-RLLAEIYEQEG-------DWEKAIEVLERLLKLGPENAHAYCELAELYL 155
PRK02603 PRK02603
photosystem I assembly protein Ycf3; Provisional
 186-284 4.58e-03

photosystem I assembly protein Ycf3; Provisional


Pssm-ID: 179448 [Multi-domain]  Cd Length: 172  Bit Score: 37.73  E-value: 4.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921753 186 LAKIIFK----RQDTKEAQLY-----AAQAHlklGEvsvesenYLQAVEEFQACLNLQEqylEAHDRllAETHYQLGLAY 256
Cdd:PRK02603  18 MADLILKilpiNKKAKEAFVYyrdgmSAQAD---GE-------YAEALENYEEALKLEE---DPNDR--SYILYNMGIIY 82

                         90       100
                 ....*....|....*....|....*...
gi 741921753 257 GYNSQYDEAVAQFSKSIEVIEKRMAVLN 284
Cdd:PRK02603  83 ASNGEHDKALEYYHQALELNPKQPSALN 110
TPR_1 pfam00515
Tetratricopeptide repeat;
246-275 5.66e-03

Tetratricopeptide repeat;


Pssm-ID: 459840 [Multi-domain]  Cd Length: 34  Bit Score: 34.32  E-value: 5.66e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 741921753  246 AETHYQLGLAYGYNSQYDEAVAQFSKSIEV 275
Cdd:pfam00515   1 AKALYNLGNAYFKLGKYDEALEYYEKALEL 30
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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