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Conserved domains on  [gi|741921751|ref|XP_010801906|]
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nuclear autoantigenic sperm protein isoform X2 [Bos taurus]

Protein Classification

TPR_12 and SHNi-TPR domain-containing protein( domain architecture ID 12139966)

TPR_12 and SHNi-TPR domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
 531-568 8.24e-09

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


:

Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 51.68  E-value: 8.24e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 741921751  531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAH 568
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
529-605 4.02e-08

Tetratricopeptide repeat;


:

Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 50.85  E-value: 4.02e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921751  529 YAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK 605
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
2A1904 super family cl36772
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 192-459 1.52e-05

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


The actual alignment was detected with superfamily member TIGR00927:

Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 48.45  E-value: 1.52e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   192 AEELQEKVKSAPDQLTETTEEGKGAAAPEGLSEaEVTSKKPDQEIPGAEEGKSVSETDVQEECREKGGQGevivsiEEKP 271
Cdd:TIGR00927  642 GERTGEEGERPTEAEGENGEESGGEAEQEGETE-TKGENESEGEIPAERKGEQEGEGEIEAKEADHKGET------EAEE 714

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   272 KEASKEQPVVTLEKQGtpvEIEAVKPVDMGGDEPKEQVAA-----SESERGKAILEQLVGQELPSAEESPEVTTQAADAS 346
Cdd:TIGR00927  715 VEHEGETEAEGTEDEG---EIETGEEGEEVEDEGEGEAEGkheveTEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEM 791

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   347 AAEAGSEVSEKPGGQDTVLPQDGAVNGLSAAGDHASTKPQTNAEGLIGTKDGSALEKVRAelvpsqetklsvEESEAAGD 426
Cdd:TIGR00927  792 KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKG------------VDGGGGSD 859

                          250       260       270
                   ....*....|....*....|....*....|...
gi 741921751   427 GVETEVAQGATEQSPEDKVKIAANEEAQDKEEQ 459
Cdd:TIGR00927  860 GGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
 
Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
 531-568 8.24e-09

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 51.68  E-value: 8.24e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 741921751  531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAH 568
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
529-605 4.02e-08

Tetratricopeptide repeat;


Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 50.85  E-value: 4.02e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921751  529 YAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK 605
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 505-601 1.05e-06

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 52.30  E-value: 1.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 505 ELAWDMLDLAKIIFKRQDTKEA-QLYA---------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllae 574
Cdd:COG3914  110 DNAEALFNLGNLLLALGRLEEAlAALRralalnpdfAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEA------- 182

                         90       100
                 ....*....|....*....|....*..
gi 741921751 575 tHYQLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG3914  183 -LNNLGNALQDLGRLEEAIAAYRRALE 208
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
531-601 8.75e-06

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 47.60  E-value: 8.75e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921751 531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRllaethyqLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG4785  107 AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLN--------RGIALYYLGRYELAIADLEKALE 169
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 192-459 1.52e-05

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 48.45  E-value: 1.52e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   192 AEELQEKVKSAPDQLTETTEEGKGAAAPEGLSEaEVTSKKPDQEIPGAEEGKSVSETDVQEECREKGGQGevivsiEEKP 271
Cdd:TIGR00927  642 GERTGEEGERPTEAEGENGEESGGEAEQEGETE-TKGENESEGEIPAERKGEQEGEGEIEAKEADHKGET------EAEE 714

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   272 KEASKEQPVVTLEKQGtpvEIEAVKPVDMGGDEPKEQVAA-----SESERGKAILEQLVGQELPSAEESPEVTTQAADAS 346
Cdd:TIGR00927  715 VEHEGETEAEGTEDEG---EIETGEEGEEVEDEGEGEAEGkheveTEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEM 791

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   347 AAEAGSEVSEKPGGQDTVLPQDGAVNGLSAAGDHASTKPQTNAEGLIGTKDGSALEKVRAelvpsqetklsvEESEAAGD 426
Cdd:TIGR00927  792 KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKG------------VDGGGGSD 859

                          250       260       270
                   ....*....|....*....|....*....|...
gi 741921751   427 GVETEVAQGATEQSPEDKVKIAANEEAQDKEEQ 459
Cdd:TIGR00927  860 GGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
PTZ00121 PTZ00121
MAEBL; Provisional
 137-505 1.89e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.05  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  137 DEEAREELREQVYDAMGEKEAQKTEDKSLVKPEMDKEQETEMEKGGREDMDIGEPAEELQEKVKSapDQLTETTEEGKga 216
Cdd:PTZ00121 1369 AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKA--DEAKKKAEEAK-- 1444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  217 aapeglsEAEVTSKKPDQEIPGAEEGKSVSETDVQEECREKGGQGEVIVSIEEKPKEASKEQPVVTLEKQGTPVEIEAVK 296
Cdd:PTZ00121 1445 -------KADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKK 1517

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  297 PVDM-GGDEPKEQVAASESERGKAILEQLVGQELPSAEESPEvtTQAADASAAEAGSEVSEKPGGQDTVLPQDGAVNGLS 375
Cdd:PTZ00121 1518 AEEAkKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK--AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  376 AAGDHASTKPQTNAEGLIGTKDgsalEKVRAELVPSQETKLsvEESEAAGDGVETEVAQGATEQSPEDKVKIAANEEAQD 455
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEE----AKIKAEELKKAEEEK--KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKK 1669

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 741921751  456 KEEQMKEGEETEGSEEEDKENDKAEETLNDSALENKSLQENEEEEIGNLE 505
Cdd:PTZ00121 1670 AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAE 1719
TPR smart00028
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ...
 573-602 7.48e-03

Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.


Pssm-ID: 197478 [Multi-domain]  Cd Length: 34  Bit Score: 34.73  E-value: 7.48e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 741921751   573 AETHYQLGLAYGYNSQYDEAVAQFSKSIEV 602
Cdd:smart00028   1 AEALYNLGNAYLKLGDYDEALEYYEKALEL 30
PRK02603 PRK02603
photosystem I assembly protein Ycf3; Provisional
 513-611 7.92e-03

photosystem I assembly protein Ycf3; Provisional


Pssm-ID: 179448 [Multi-domain]  Cd Length: 172  Bit Score: 38.11  E-value: 7.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 513 LAKIIFK----RQDTKEAQLY-----AAQAHlklGEvsvesenYLQAVEEFQACLNLQEqylEAHDRllAETHYQLGLAY 583
Cdd:PRK02603  18 MADLILKilpiNKKAKEAFVYyrdgmSAQAD---GE-------YAEALENYEEALKLEE---DPNDR--SYILYNMGIIY 82

                         90       100
                 ....*....|....*....|....*...
gi 741921751 584 GYNSQYDEAVAQFSKSIEVIEKRMAVLN 611
Cdd:PRK02603  83 ASNGEHDKALEYYHQALELNPKQPSALN 110
 
Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
 531-568 8.24e-09

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 51.68  E-value: 8.24e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 741921751  531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAH 568
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
529-605 4.02e-08

Tetratricopeptide repeat;


Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 50.85  E-value: 4.02e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 741921751  529 YAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEK 605
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 505-601 1.05e-06

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 52.30  E-value: 1.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 505 ELAWDMLDLAKIIFKRQDTKEA-QLYA---------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllae 574
Cdd:COG3914  110 DNAEALFNLGNLLLALGRLEEAlAALRralalnpdfAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEA------- 182

                         90       100
                 ....*....|....*....|....*..
gi 741921751 575 tHYQLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG3914  183 -LNNLGNALQDLGRLEEAIAAYRRALE 208
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
487-601 1.37e-06

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 49.91  E-value: 1.37e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 487 ALENKSLQENEEEEIGNLELAWDMLDLAKIIFKRQDTKEAQLYAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYle 566
Cdd:COG4785   29 LLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL-- 106

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 741921751 567 ahdrllAETHYQLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG4785  107 ------AEAYNNRGLAYLLLGDYDAALEDFDRALE 135
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
531-601 8.75e-06

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 47.60  E-value: 8.75e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921751 531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRllaethyqLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG4785  107 AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLN--------RGIALYYLGRYELAIADLEKALE 169
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 192-459 1.52e-05

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 48.45  E-value: 1.52e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   192 AEELQEKVKSAPDQLTETTEEGKGAAAPEGLSEaEVTSKKPDQEIPGAEEGKSVSETDVQEECREKGGQGevivsiEEKP 271
Cdd:TIGR00927  642 GERTGEEGERPTEAEGENGEESGGEAEQEGETE-TKGENESEGEIPAERKGEQEGEGEIEAKEADHKGET------EAEE 714

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   272 KEASKEQPVVTLEKQGtpvEIEAVKPVDMGGDEPKEQVAA-----SESERGKAILEQLVGQELPSAEESPEVTTQAADAS 346
Cdd:TIGR00927  715 VEHEGETEAEGTEDEG---EIETGEEGEEVEDEGEGEAEGkheveTEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEM 791

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   347 AAEAGSEVSEKPGGQDTVLPQDGAVNGLSAAGDHASTKPQTNAEGLIGTKDGSALEKVRAelvpsqetklsvEESEAAGD 426
Cdd:TIGR00927  792 KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKG------------VDGGGGSD 859

                          250       260       270
                   ....*....|....*....|....*....|...
gi 741921751   427 GVETEVAQGATEQSPEDKVKIAANEEAQDKEEQ 459
Cdd:TIGR00927  860 GGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
531-601 4.69e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 42.69  E-value: 4.69e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921751 531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYleahdrllAETHYQLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG0457    8 AEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDD--------AEALYNLGLAYLRLGRYEEALADYEQALE 70
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 156-362 6.21e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 43.45  E-value: 6.21e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   156 EAQKTEDKSlvKPEMDKEQETEMEKGGREDMDiGEPAEELQEKVKSapDQLTETTEEGKGAAAPEGLSEAEVTSKKPDQE 235
Cdd:TIGR00927  637 EAEHTGERT--GEEGERPTEAEGENGEESGGE-AEQEGETETKGEN--ESEGEIPAERKGEQEGEGEIEAKEADHKGETE 711

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751   236 IPGAE-EGKSVSETDVQEECREKGGQGEVIVSIEEKPKEASKEQPVVTLEKQGtpvEIEAVKPVDMGGDEPKEQVAASES 314
Cdd:TIGR00927  712 AEEVEhEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKET---EHEGETEAEGKEDEDEGEIQAGED 788

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 741921751   315 ERGKAILEQLVGQELPSAEESPEVTTQAADASAAEAGSEVSEKPGGQD 362
Cdd:TIGR00927  789 GEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQE 836
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
531-601 8.05e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 41.92  E-value: 8.05e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921751 531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYleahdrllAETHYQLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG0457   42 AEALYNLGLAYLRLGRYEEALADYEQALELDPDD--------AEALNNLGLALQALGRYEEALEDYDKALE 104
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
531-601 1.86e-03

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 40.76  E-value: 1.86e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 741921751 531 AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAHDRlLAETHYQLGlaygynsQYDEAVAQFSKSIE 601
Cdd:COG0457   76 AEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYN-LGLALLELG-------RYDEAIEAYERALE 138
PTZ00121 PTZ00121
MAEBL; Provisional
 137-505 1.89e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.05  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  137 DEEAREELREQVYDAMGEKEAQKTEDKSLVKPEMDKEQETEMEKGGREDMDIGEPAEELQEKVKSapDQLTETTEEGKga 216
Cdd:PTZ00121 1369 AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKA--DEAKKKAEEAK-- 1444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  217 aapeglsEAEVTSKKPDQEIPGAEEGKSVSETDVQEECREKGGQGEVIVSIEEKPKEASKEQPVVTLEKQGTPVEIEAVK 296
Cdd:PTZ00121 1445 -------KADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKK 1517

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  297 PVDM-GGDEPKEQVAASESERGKAILEQLVGQELPSAEESPEvtTQAADASAAEAGSEVSEKPGGQDTVLPQDGAVNGLS 375
Cdd:PTZ00121 1518 AEEAkKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK--AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751  376 AAGDHASTKPQTNAEGLIGTKDgsalEKVRAELVPSQETKLsvEESEAAGDGVETEVAQGATEQSPEDKVKIAANEEAQD 455
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEE----AKIKAEELKKAEEEK--KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKK 1669

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 741921751  456 KEEQMKEGEETEGSEEEDKENDKAEETLNDSALENKSLQENEEEEIGNLE 505
Cdd:PTZ00121 1670 AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAE 1719
TPR_1 pfam00515
Tetratricopeptide repeat;
573-602 4.30e-03

Tetratricopeptide repeat;


Pssm-ID: 459840 [Multi-domain]  Cd Length: 34  Bit Score: 35.47  E-value: 4.30e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 741921751  573 AETHYQLGLAYGYNSQYDEAVAQFSKSIEV 602
Cdd:pfam00515   1 AKALYNLGNAYFKLGKYDEALEYYEKALEL 30
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
 507-617 4.64e-03

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 38.06  E-value: 4.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 507 AWDMLdlAKIIFKRQDTKEA-QLYA---------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllaetH 576
Cdd:COG4235   19 GWLLL--GRAYLRLGRYDEAlAAYEkalrldpdnADALLDLAEALLAAGDTEEAEELLERALALDPDNPEA--------L 88

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 741921751 577 YQLGLAYGYNSQYDEAVAQFSKSIEVIEK--RMAVLNEQMKEA 617
Cdd:COG4235   89 YLLGLAAFQQGDYAEAIAAWQKLLALLPAdaPARLLEASIAEA 131
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 505-601 5.37e-03

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 37.86  E-value: 5.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 505 ELAWDMLDLAKIIFKRQDTKEAQLYA----------AQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYLEAhdrllae 574
Cdd:COG4783    2 ACAEALYALAQALLLAGDYDEAEALLekaleldpdnPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEA------- 74

                         90       100
                 ....*....|....*....|....*..
gi 741921751 575 tHYQLGLAYGYNSQYDEAVAQFSKSIE 601
Cdd:COG4783   75 -RLNLGLALLKAGDYDEALALLEKALK 100
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 475-618 6.06e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 39.33  E-value: 6.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 475 ENDKAEETLNDsALENKSLQENEEEEIGNLELAWDMLDLAKIIFKRqdTKEAQLYAAQAHLKLGEVSVESENYLQAVEEF 554
Cdd:COG2956   23 QPDKAIDLLEE-ALELDPETVEAHLALGNLYRRRGEYDRAIRIHQK--LLERDPDRAEALLELAQDYLKAGLLDRAEELL 99

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 741921751 555 QACLNLQEQYLEAHdRLLAETHYQLGlaygynsQYDEAVAQFSKSIEVIEKRMAVLNEQMKEAE 618
Cdd:COG2956  100 EKLLELDPDDAEAL-RLLAEIYEQEG-------DWEKAIEVLERLLKLGPENAHAYCELAELYL 155
TPR smart00028
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ...
 573-602 7.48e-03

Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.


Pssm-ID: 197478 [Multi-domain]  Cd Length: 34  Bit Score: 34.73  E-value: 7.48e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 741921751   573 AETHYQLGLAYGYNSQYDEAVAQFSKSIEV 602
Cdd:smart00028   1 AEALYNLGNAYLKLGDYDEALEYYEKALEL 30
PRK02603 PRK02603
photosystem I assembly protein Ycf3; Provisional
 513-611 7.92e-03

photosystem I assembly protein Ycf3; Provisional


Pssm-ID: 179448 [Multi-domain]  Cd Length: 172  Bit Score: 38.11  E-value: 7.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 513 LAKIIFK----RQDTKEAQLY-----AAQAHlklGEvsvesenYLQAVEEFQACLNLQEqylEAHDRllAETHYQLGLAY 583
Cdd:PRK02603  18 MADLILKilpiNKKAKEAFVYyrdgmSAQAD---GE-------YAEALENYEEALKLEE---DPNDR--SYILYNMGIIY 82

                         90       100
                 ....*....|....*....|....*...
gi 741921751 584 GYNSQYDEAVAQFSKSIEVIEKRMAVLN 611
Cdd:PRK02603  83 ASNGEHDKALEYYHQALELNPKQPSALN 110
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 474-617 9.53e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 38.56  E-value: 9.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 741921751 474 KENDKAEETLNdsalenKSLQENEEEEIGNLELAwdmldlaKIIFKRQDTKEAQLYAAQA----------HLKLGEVSVE 543
Cdd:COG2956  124 GDWEKAIEVLE------RLLKLGPENAHAYCELA-------ELYLEQGDYDEAIEALEKAlkldpdcaraLLLLAELYLE 190

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 741921751 544 SENYLQAVEEFQACLNLQEQYLEAHDRlLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIEKRMAVLNEQMKEA 617
Cdd:COG2956  191 QGDYEEAIAALERALEQDPDYLPALPR-LAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEGLEA 263
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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