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Conserved domains on  [gi|685302053|ref|XP_009141731|]
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ammonium transporter 2 [Brassica rapa]

Protein Classification

ammonium transporter( domain architecture ID 10017437)

ammonium transporter functions in the uptake or transport of ammonia, similar to Saccharomyces cerevisiae MEP2 that plays an important role as an ammonium sensor in fungal development; its activity is tightly regulated by phosphorylation

CATH:  1.10.3430.10
Gene Ontology:  GO:0016020|GO:0008519|GO:0072488
SCOP:  3001978
TCDB:  1.A.11

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
amt TIGR00836
ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally ...
21-445 3.96e-126

ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273292  Cd Length: 403  Bit Score: 373.14  E-value: 3.96e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053   21 NAWQLTAATLVGLQsMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDeLLPFWGRGGPAFdqGYLK 100
Cdd:TIGR00836   1 TAWLLIAAALVFFM-QPGFALLYAGLVRSKNVLNIMMKNLLDFAIGSLLWWLFGYSLAFGE-DNPINGFIGTGG--FGLK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  101 dratipstvkkfGNGTIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWG 180
Cdd:TIGR00836  77 ------------NFLYPGKISLAGTLPDLLFFLFQMMFAAIAATIISGAVAERMKFSAYLLFSVLWTTLVYPPVAHWVWG 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  181 -GGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPQAD--RERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLT 257
Cdd:TIGR00836 145 gGGWLYKLGVLDFAGGGVVHIVGGVAGLAAALVLGPRIGRFprPVAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGT 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  258 SSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWASMMILHKKS 337
Cdd:TIGR00836 225 AAYAAVNTNLAAAAGGLTWLLIDWLKHGKPTLLGACNGILAGLVAITPGCGVVTPWGAIIIGLVAGVLCYLAVSKLKKKL 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  338 tllqQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLCKLslpnpTNGAFYGGNgGKQLLKQWAGAVFIAVWNLVSTTLILL 417
Cdd:TIGR00836 305 ----KIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGV-----GTGGLLGGN-GKQLGVQLIGIAAIIAWAFVVTFIILK 374
                         410       420
                  ....*....|....*....|....*....
gi 685302053  418 FIKMFIPLRMAEEELGIGDDAA-HGEEAY 445
Cdd:TIGR00836 375 ILDKTIGLRVSEEEEKIGLDLAeHGEFAY 403
 
Name Accession Description Interval E-value
amt TIGR00836
ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally ...
21-445 3.96e-126

ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273292  Cd Length: 403  Bit Score: 373.14  E-value: 3.96e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053   21 NAWQLTAATLVGLQsMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDeLLPFWGRGGPAFdqGYLK 100
Cdd:TIGR00836   1 TAWLLIAAALVFFM-QPGFALLYAGLVRSKNVLNIMMKNLLDFAIGSLLWWLFGYSLAFGE-DNPINGFIGTGG--FGLK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  101 dratipstvkkfGNGTIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWG 180
Cdd:TIGR00836  77 ------------NFLYPGKISLAGTLPDLLFFLFQMMFAAIAATIISGAVAERMKFSAYLLFSVLWTTLVYPPVAHWVWG 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  181 -GGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPQAD--RERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLT 257
Cdd:TIGR00836 145 gGGWLYKLGVLDFAGGGVVHIVGGVAGLAAALVLGPRIGRFprPVAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGT 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  258 SSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWASMMILHKKS 337
Cdd:TIGR00836 225 AAYAAVNTNLAAAAGGLTWLLIDWLKHGKPTLLGACNGILAGLVAITPGCGVVTPWGAIIIGLVAGVLCYLAVSKLKKKL 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  338 tllqQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLCKLslpnpTNGAFYGGNgGKQLLKQWAGAVFIAVWNLVSTTLILL 417
Cdd:TIGR00836 305 ----KIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGV-----GTGGLLGGN-GKQLGVQLIGIAAIIAWAFVVTFIILK 374
                         410       420
                  ....*....|....*....|....*....
gi 685302053  418 FIKMFIPLRMAEEELGIGDDAA-HGEEAY 445
Cdd:TIGR00836 375 ILDKTIGLRVSEEEEKIGLDLAeHGEFAY 403
AmtB COG0004
Ammonia channel protein AmtB [Inorganic ion transport and metabolism];
12-445 5.89e-104

Ammonia channel protein AmtB [Inorganic ion transport and metabolism];


Pssm-ID: 439775  Cd Length: 413  Bit Score: 316.67  E-value: 5.89e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  12 VPEWLNKGDNAWQLTAATLVGLQSmPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDELLPFWGRGG 91
Cdd:COG0004    3 AAALLDSGDTAWMLVAAALVLLMT-PGFALFEGGLVRSKNVLNVLMKNFADFALVSVLWVLVGYSLAFGPGAGGFIGGPL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  92 PAFDQGylkdratipstvkkfgngtIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSY 171
Cdd:COG0004   82 GFFLSG-------------------VGPGSLAGTIPELVFFLFQMMFAAITAAIISGAVAERMKFSAYLIFSVLWSTLVY 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 172 TVGAYSIWGGGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPR---PQADRERFPPNNVLLMLAGAGLLWMGWSGFNG 248
Cdd:COG0004  143 PPVAHWVWGGGWLAQLGFLDFAGGTVVHIVGGWAALAGALVLGPRigkYKGKPNAIPPHNLPLAALGAFLLWFGWFGFNA 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 249 GAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWA 328
Cdd:COG0004  223 GSALAANGLAGLAFVNTNLAAAAGALAWLLVEWLRKGKPDLLGAANGALAGLVAITPAAGFVSPLGALVIGLIAGVICVF 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 329 SMMILHKKStllqQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLcklslpnPTNGAFYGGNGGkQLLKQWAGAVFIAVWN 408
Cdd:COG0004  303 AVTFLKRKL----KIDDPLGAFGVHGVGGIWGTLATGLFASPAL-------GGAGLFYGGGAA-QLGVQLIGVLVVGVWA 370
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 685302053 409 LVSTTLILLFIKMFIPLRMAEEELGIG-DDAAHGEEAY 445
Cdd:COG0004  371 FVVSFIILKILKKTIGLRVSEEEEREGlDLSEHGERAY 408
Ammonium_transp pfam00909
Ammonium Transporter Family;
22-445 1.65e-64

Ammonium Transporter Family;


Pssm-ID: 395729  Cd Length: 399  Bit Score: 214.08  E-value: 1.65e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053   22 AWQLTAATLVGLqSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDELlpfwGRGGPAFDQGYLkd 101
Cdd:pfam00909   1 AFILLSAALVIF-MQPGFALLESGLVRSKNVLNILYKNFQDVAIGVLAYWLFGYSLAFGKRY----GFSGFIGNLGVS-- 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  102 ratipstVKKFGNGTIEREAvtplfpmatLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWG- 180
Cdd:pfam00909  74 -------AAGIQWGTLPDGL---------FFLFQMMFAATAITIVSGAVAERIKFSAYLLFSALLGTLVYPPVAHWVWGe 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  181 GGFLYHWGV-IDYSGGYVIHLSSGVAGFVAAYWVGPR---PQADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANL 256
Cdd:pfam00909 138 GGWLAKLGVlVDFAGSTVVHIFGGYAGLAAALVLGPRigrFTGKNEAITPHNLPFAVLGTFLLWFGWFGFNAGSALTANG 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  257 TS-SIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSV-PWAsmmilH 334
Cdd:pfam00909 218 RArAIAAVNTNLAAAGGGLTALLISRLKTGKPNMLGLANGALAGLVAITPACGVVTPWGALIIGLIAGVLsVLG-----Y 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  335 KKSTLLQQVDDTLAVFYTHAVAGILGGTMTGLFAHPdlcKLSLPNPTNGAFYGgnGGKQLLKQWAGAVFIAVWNLVSTTL 414
Cdd:pfam00909 293 KFLKEKLGIDDPLDVFPVHGVGGIWGGIAVGIFAAP---YVNTSGIYGGLLYG--NGKQLGVQLIGIAVILAYAFGVTFI 367
                         410       420       430
                  ....*....|....*....|....*....|..
gi 685302053  415 ILLFIKMFIPLRMAEEELGIGDDAA-HGEEAY 445
Cdd:pfam00909 368 LGLLLGLTLGLRVSEEEEEVGLDVAeHGETAY 399
PRK10666 PRK10666
ammonium transporter AmtB;
12-445 3.06e-58

ammonium transporter AmtB;


Pssm-ID: 182630  Cd Length: 428  Bit Score: 198.43  E-value: 3.06e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  12 VPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGdELLPFWGrgg 91
Cdd:PRK10666  23 APAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFG-EGNAFFG--- 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  92 pAFDQGYLKDratipstvkkfgngtIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSY 171
Cdd:PRK10666  99 -NFNWLMLKN---------------IELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSY 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 172 TVGAYSIWGGGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPQADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAP 251
Cdd:PRK10666 163 IPIAHMVWGGGLLASDGALDFAGGTVVHINAAVAGLVGAYLLGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSA 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 252 YAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWASMM 331
Cdd:PRK10666 243 GAANEIAALAFVNTVVATAAAILGWVFGEWALRGKPSLLGACSGAIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWGVT 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 332 ILHKkstlLQQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLCKLSLPNptngafyGGNGGKQLLKQWAGAVFIAVWNLVS 411
Cdd:PRK10666 323 MLKR----WLRVDDPCDVFGVHGVCGIVGCILTGIFAASSLGGVGYAE-------GVTMGHQVLVQLESIAITIVWSGVV 391
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 685302053 412 TTLILLFIKMFIPLRMAEEELGIGDDA-AHGEEAY 445
Cdd:PRK10666 392 AFIGYKLADLTVGLRVPEEQEREGLDVnSHGENAY 426
 
Name Accession Description Interval E-value
amt TIGR00836
ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally ...
21-445 3.96e-126

ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273292  Cd Length: 403  Bit Score: 373.14  E-value: 3.96e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053   21 NAWQLTAATLVGLQsMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDeLLPFWGRGGPAFdqGYLK 100
Cdd:TIGR00836   1 TAWLLIAAALVFFM-QPGFALLYAGLVRSKNVLNIMMKNLLDFAIGSLLWWLFGYSLAFGE-DNPINGFIGTGG--FGLK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  101 dratipstvkkfGNGTIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWG 180
Cdd:TIGR00836  77 ------------NFLYPGKISLAGTLPDLLFFLFQMMFAAIAATIISGAVAERMKFSAYLLFSVLWTTLVYPPVAHWVWG 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  181 -GGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPQAD--RERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLT 257
Cdd:TIGR00836 145 gGGWLYKLGVLDFAGGGVVHIVGGVAGLAAALVLGPRIGRFprPVAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGT 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  258 SSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWASMMILHKKS 337
Cdd:TIGR00836 225 AAYAAVNTNLAAAAGGLTWLLIDWLKHGKPTLLGACNGILAGLVAITPGCGVVTPWGAIIIGLVAGVLCYLAVSKLKKKL 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  338 tllqQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLCKLslpnpTNGAFYGGNgGKQLLKQWAGAVFIAVWNLVSTTLILL 417
Cdd:TIGR00836 305 ----KIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGV-----GTGGLLGGN-GKQLGVQLIGIAAIIAWAFVVTFIILK 374
                         410       420
                  ....*....|....*....|....*....
gi 685302053  418 FIKMFIPLRMAEEELGIGDDAA-HGEEAY 445
Cdd:TIGR00836 375 ILDKTIGLRVSEEEEKIGLDLAeHGEFAY 403
AmtB COG0004
Ammonia channel protein AmtB [Inorganic ion transport and metabolism];
12-445 5.89e-104

Ammonia channel protein AmtB [Inorganic ion transport and metabolism];


Pssm-ID: 439775  Cd Length: 413  Bit Score: 316.67  E-value: 5.89e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  12 VPEWLNKGDNAWQLTAATLVGLQSmPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDELLPFWGRGG 91
Cdd:COG0004    3 AAALLDSGDTAWMLVAAALVLLMT-PGFALFEGGLVRSKNVLNVLMKNFADFALVSVLWVLVGYSLAFGPGAGGFIGGPL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  92 PAFDQGylkdratipstvkkfgngtIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSY 171
Cdd:COG0004   82 GFFLSG-------------------VGPGSLAGTIPELVFFLFQMMFAAITAAIISGAVAERMKFSAYLIFSVLWSTLVY 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 172 TVGAYSIWGGGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPR---PQADRERFPPNNVLLMLAGAGLLWMGWSGFNG 248
Cdd:COG0004  143 PPVAHWVWGGGWLAQLGFLDFAGGTVVHIVGGWAALAGALVLGPRigkYKGKPNAIPPHNLPLAALGAFLLWFGWFGFNA 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 249 GAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWA 328
Cdd:COG0004  223 GSALAANGLAGLAFVNTNLAAAAGALAWLLVEWLRKGKPDLLGAANGALAGLVAITPAAGFVSPLGALVIGLIAGVICVF 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 329 SMMILHKKStllqQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLcklslpnPTNGAFYGGNGGkQLLKQWAGAVFIAVWN 408
Cdd:COG0004  303 AVTFLKRKL----KIDDPLGAFGVHGVGGIWGTLATGLFASPAL-------GGAGLFYGGGAA-QLGVQLIGVLVVGVWA 370
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 685302053 409 LVSTTLILLFIKMFIPLRMAEEELGIG-DDAAHGEEAY 445
Cdd:COG0004  371 FVVSFIILKILKKTIGLRVSEEEEREGlDLSEHGERAY 408
Ammonium_transp pfam00909
Ammonium Transporter Family;
22-445 1.65e-64

Ammonium Transporter Family;


Pssm-ID: 395729  Cd Length: 399  Bit Score: 214.08  E-value: 1.65e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053   22 AWQLTAATLVGLqSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGDELlpfwGRGGPAFDQGYLkd 101
Cdd:pfam00909   1 AFILLSAALVIF-MQPGFALLESGLVRSKNVLNILYKNFQDVAIGVLAYWLFGYSLAFGKRY----GFSGFIGNLGVS-- 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  102 ratipstVKKFGNGTIEREAvtplfpmatLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWG- 180
Cdd:pfam00909  74 -------AAGIQWGTLPDGL---------FFLFQMMFAATAITIVSGAVAERIKFSAYLLFSALLGTLVYPPVAHWVWGe 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  181 GGFLYHWGV-IDYSGGYVIHLSSGVAGFVAAYWVGPR---PQADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANL 256
Cdd:pfam00909 138 GGWLAKLGVlVDFAGSTVVHIFGGYAGLAAALVLGPRigrFTGKNEAITPHNLPFAVLGTFLLWFGWFGFNAGSALTANG 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  257 TS-SIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSV-PWAsmmilH 334
Cdd:pfam00909 218 RArAIAAVNTNLAAAGGGLTALLISRLKTGKPNMLGLANGALAGLVAITPACGVVTPWGALIIGLIAGVLsVLG-----Y 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  335 KKSTLLQQVDDTLAVFYTHAVAGILGGTMTGLFAHPdlcKLSLPNPTNGAFYGgnGGKQLLKQWAGAVFIAVWNLVSTTL 414
Cdd:pfam00909 293 KFLKEKLGIDDPLDVFPVHGVGGIWGGIAVGIFAAP---YVNTSGIYGGLLYG--NGKQLGVQLIGIAVILAYAFGVTFI 367
                         410       420       430
                  ....*....|....*....|....*....|..
gi 685302053  415 ILLFIKMFIPLRMAEEELGIGDDAA-HGEEAY 445
Cdd:pfam00909 368 LGLLLGLTLGLRVSEEEEEVGLDVAeHGETAY 399
PRK10666 PRK10666
ammonium transporter AmtB;
12-445 3.06e-58

ammonium transporter AmtB;


Pssm-ID: 182630  Cd Length: 428  Bit Score: 198.43  E-value: 3.06e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  12 VPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGdELLPFWGrgg 91
Cdd:PRK10666  23 APAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFG-EGNAFFG--- 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053  92 pAFDQGYLKDratipstvkkfgngtIEREAVTPLFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSY 171
Cdd:PRK10666  99 -NFNWLMLKN---------------IELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSY 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 172 TVGAYSIWGGGFLYHWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPQADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAP 251
Cdd:PRK10666 163 IPIAHMVWGGGLLASDGALDFAGGTVVHINAAVAGLVGAYLLGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSA 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 252 YAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGIFSGSVPWASMM 331
Cdd:PRK10666 243 GAANEIAALAFVNTVVATAAAILGWVFGEWALRGKPSLLGACSGAIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWGVT 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685302053 332 ILHKkstlLQQVDDTLAVFYTHAVAGILGGTMTGLFAHPDLCKLSLPNptngafyGGNGGKQLLKQWAGAVFIAVWNLVS 411
Cdd:PRK10666 323 MLKR----WLRVDDPCDVFGVHGVCGIVGCILTGIFAASSLGGVGYAE-------GVTMGHQVLVQLESIAITIVWSGVV 391
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 685302053 412 TTLILLFIKMFIPLRMAEEELGIGDDA-AHGEEAY 445
Cdd:PRK10666 392 AFIGYKLADLTVGLRVPEEQEREGLDVnSHGENAY 426
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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