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Conserved domains on  [gi|672074959|ref|XP_008768017|]
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kynurenine 3-monooxygenase isoform X4 [Rattus norvegicus]

Protein Classification

FAD-dependent oxidoreductase( domain architecture ID 11428987)

FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0071949|GO:0016491

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 56-262 3.12e-13

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


:

Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 69.97  E-value: 3.12e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  56 ITCDLIVGCDGAYSTVRAHLMKKPR-FDYSQQYIphgymeltippkngeyamepnclhiWprnafmmialpnmdksftct 134
Cdd:COG0654  147 LRADLVVGADGARSAVRRLLGIGFTgRDYPQRAL-------------------------W-------------------- 181

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 135 lfmsfeefeklpthSDVLDFFQKNFPDAIPLMGEqalMRDFFLLPAQPMISVKCSPFHlKSRCVLMGDAAHAIVPFFGQG 214
Cdd:COG0654  182 --------------AGVRTELRARLAAAGPRLGE---LLELSPRSAFPLRRRRAERWR-RGRVVLLGDAAHTMHPLGGQG 243

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 672074959 215 MNAGFEDCLVFDELMDKF--NNDLSVCLPEFSRFRIPDDHAISDLSMYNY 262
Cdd:COG0654  244 ANLALRDAAALAWKLAAAlrGRDDEAALARYERERRPRAARVQRAADALG 293
 
Name Accession Description Interval E-value
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 56-262 3.12e-13

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 69.97  E-value: 3.12e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  56 ITCDLIVGCDGAYSTVRAHLMKKPR-FDYSQQYIphgymeltippkngeyamepnclhiWprnafmmialpnmdksftct 134
Cdd:COG0654  147 LRADLVVGADGARSAVRRLLGIGFTgRDYPQRAL-------------------------W-------------------- 181

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 135 lfmsfeefeklpthSDVLDFFQKNFPDAIPLMGEqalMRDFFLLPAQPMISVKCSPFHlKSRCVLMGDAAHAIVPFFGQG 214
Cdd:COG0654  182 --------------AGVRTELRARLAAAGPRLGE---LLELSPRSAFPLRRRRAERWR-RGRVVLLGDAAHTMHPLGGQG 243

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 672074959 215 MNAGFEDCLVFDELMDKF--NNDLSVCLPEFSRFRIPDDHAISDLSMYNY 262
Cdd:COG0654  244 ANLALRDAAALAWKLAAAlrGRDDEAALARYERERRPRAARVQRAADALG 293
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 54-221 1.37e-07

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 53.22  E-value: 1.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959   54 RDITCDLIVGCDGAYSTVR-AHLMKKPRFDYSQQYIPhGYMELTIPPKN----------GEYAMEP----NCLHIW---P 115
Cdd:TIGR01989 168 QVLYTKLLIGADGSNSNVRkAANIDTTGWNYNQHAVV-ATLKLEEATENdvawqrflptGPIALLPlpdnNSTLVWstsP 246

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  116 RNAFMMIALPnmDKSFTCTLFMSFE-EFEKLPtHSDVLDFFQKNFPDAIPLMGEQAlMRDFFLLPAqpMISVKCS----- 189
Cdd:TIGR01989 247 EEALRLLSLP--PEDFVDALNAAFDlGYSDHP-YSYLLDYAMEKLNEDIGFRTEGS-KSCFQVPPR--VIGVVDKsraaf 320

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 672074959  190 PFHL-------KSRCVLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:TIGR01989 321 PLGLghadeyvTKRVALVGDAAHRVHPLAGQGVNLGFGD 359
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 194-251 2.11e-07

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 52.47  E-value: 2.11e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 672074959 194 KSRCVLMGDAAHAIVPFFGQGMNAGFEDCLVFDELMDKfNNDLSVCLPE-FSRFRIPDD 251
Cdd:PRK08849 278 KNNCVLLGDAAHTINPLAGQGVNLGFKDVDVLLAETEK-QGVLNDASFArYERRRRPDN 335
 
Name Accession Description Interval E-value
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 56-262 3.12e-13

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 69.97  E-value: 3.12e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  56 ITCDLIVGCDGAYSTVRAHLMKKPR-FDYSQQYIphgymeltippkngeyamepnclhiWprnafmmialpnmdksftct 134
Cdd:COG0654  147 LRADLVVGADGARSAVRRLLGIGFTgRDYPQRAL-------------------------W-------------------- 181

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 135 lfmsfeefeklpthSDVLDFFQKNFPDAIPLMGEqalMRDFFLLPAQPMISVKCSPFHlKSRCVLMGDAAHAIVPFFGQG 214
Cdd:COG0654  182 --------------AGVRTELRARLAAAGPRLGE---LLELSPRSAFPLRRRRAERWR-RGRVVLLGDAAHTMHPLGGQG 243

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 672074959 215 MNAGFEDCLVFDELMDKF--NNDLSVCLPEFSRFRIPDDHAISDLSMYNY 262
Cdd:COG0654  244 ANLALRDAAALAWKLAAAlrGRDDEAALARYERERRPRAARVQRAADALG 293
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 54-221 1.37e-07

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 53.22  E-value: 1.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959   54 RDITCDLIVGCDGAYSTVR-AHLMKKPRFDYSQQYIPhGYMELTIPPKN----------GEYAMEP----NCLHIW---P 115
Cdd:TIGR01989 168 QVLYTKLLIGADGSNSNVRkAANIDTTGWNYNQHAVV-ATLKLEEATENdvawqrflptGPIALLPlpdnNSTLVWstsP 246

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  116 RNAFMMIALPnmDKSFTCTLFMSFE-EFEKLPtHSDVLDFFQKNFPDAIPLMGEQAlMRDFFLLPAqpMISVKCS----- 189
Cdd:TIGR01989 247 EEALRLLSLP--PEDFVDALNAAFDlGYSDHP-YSYLLDYAMEKLNEDIGFRTEGS-KSCFQVPPR--VIGVVDKsraaf 320

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 672074959  190 PFHL-------KSRCVLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:TIGR01989 321 PLGLghadeyvTKRVALVGDAAHRVHPLAGQGVNLGFGD 359
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 56-254 1.91e-07

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 52.59  E-value: 1.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959   56 ITCDLIVGCDGAYSTVRAHL-MKKPRFDYSQQYI--------PHGY--MELTIPpkNGEYAM----EPNCLHIW---PRN 117
Cdd:TIGR01988 150 LRARLLVGADGANSKVRQLAgIPTTGWDYGQSAVvanvkherPHQGtaWERFTP--TGPLALlplpDNRSSLVWtlpPEE 227

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  118 AFMMIALPnmdksftctlfmsFEEFeklpthsdvLDFFQKNFPdaiPLMGEQALMRDFFLLPAQPMISVKcspfHLKSRC 197
Cdd:TIGR01988 228 AERLLALS-------------DEEF---------LAELQRAFG---SRLGAITLVGERHAFPLSLTHAKR----YVAPRL 278

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 672074959  198 VLMGDAAHAIVPFFGQGMNAGFED------CLVFDELMDKFNNDLSVcLPEFSRFRIPDDHAI 254
Cdd:TIGR01988 279 ALIGDAAHTIHPLAGQGLNLGLRDvaalaeVLEDARRRGEDIGSLRV-LQRYERRRRFDNAAM 340
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 194-251 2.11e-07

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 52.47  E-value: 2.11e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 672074959 194 KSRCVLMGDAAHAIVPFFGQGMNAGFEDCLVFDELMDKfNNDLSVCLPE-FSRFRIPDD 251
Cdd:PRK08849 278 KNNCVLLGDAAHTINPLAGQGVNLGFKDVDVLLAETEK-QGVLNDASFArYERRRRPDN 335
PRK07364 PRK07364
FAD-dependent hydroxylase;
53-221 2.01e-06

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 49.63  E-value: 2.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  53 PRDITCDLIVGCDGAYSTVRAHLMKKPR-FDYSQQYI--------PHGYMeltippkngeyAMEpnclHIWPRNAFMMIA 123
Cdd:PRK07364 165 QQTLQSKLVVAADGARSPIRQAAGIKTKgWKYWQSCVtatvkheaPHNDI-----------AYE----RFWPSGPFAILP 229

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 124 LPNMDKSFTCTlfMSFEEFEKLPT--HSDVLDFFQKNFPDaipLMGEQALMRDFFLLPAQPMISVKcspfHLKSRCVLMG 201
Cdd:PRK07364 230 LPGNRCQIVWT--APHAQAKALLAlpEAEFLAELQQRYGD---QLGKLELLGDRFLFPVQLMQSDR----YVQHRLALVG 300

                        170       180
                 ....*....|....*....|
gi 672074959 202 DAAHAIVPFFGQGMNAGFED 221
Cdd:PRK07364 301 DAAHCCHPVGGQGLNLGIRD 320
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
53-221 1.86e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 46.82  E-value: 1.86e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  53 PRDITCDLIVGCDGAYSTVRaHLMKKPRFDYSQqyiPHGYMELTIPPKNGEYAMEPNCLHIWPRNAFMMIALPNMDKSFt 132
Cdd:PRK06183 158 RETVRARYVVGCDGANSFVR-RTLGVPFEDLTF---PERWLVVDVLIANDPLGGPHTYQYCDPARPYTSVRLPHGRRRW- 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 133 ctlfmsfeEFEKLP--THSDVLDffqknfPDAIplmgeQALMRDFFLLPAQP-MISVKCSPFHL-------KSRCVLMGD 202
Cdd:PRK06183 233 --------EFMLLPgeTEEQLAS------PENV-----WRLLAPWGPTPDDAeLIRHAVYTFHArvadrwrSGRVLLAGD 293

                        170
                 ....*....|....*....
gi 672074959 203 AAHAIVPFFGQGMNAGFED 221
Cdd:PRK06183 294 AAHLMPPFAGQGMNSGIRD 312
PRK06753 PRK06753
hypothetical protein; Provisional
 59-249 2.03e-05

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 46.22  E-value: 2.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  59 DLIVGCDGAYSTVRAHLMKKPRFDYSqqyiphGY-----MELTIPPKNGEYAMEpnclhIW-PRNAFMMIALPNMDKSFt 132
Cdd:PRK06753 142 DLCIGADGIHSKVRQSVNADSKVRYQ------GYtcfrgLIDDIDLKLPDCAKE-----YWgTKGRFGIVPLLNNQAYW- 209

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 133 ctlFMSFEEFEKLPTHSDV----LDFFQKNFPDAIPLMGEQA-----LMRDFFLLpaQPMISvkcspfHLKSRCVLMGDA 203
Cdd:PRK06753 210 ---FITINAKERDPKYSSFgkphLQAYFNHYPNEVREILDKQsetgiLHHDIYDL--KPLKS------FVYGRIVLLGDA 278

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 672074959 204 AHAIVPFFGQGMNAGFEDCLVfdeLMDKFNN-DLSVCLPEFSRFRIP 249
Cdd:PRK06753 279 AHATTPNMGQGAGQAMEDAIV---LANCLNAyDFEKALQRYDKIRVK 322
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 54-221 3.08e-05

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 45.92  E-value: 3.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  54 RDITCDLIVGCDGAYSTVRaHLMKKP--RFDYSQQYI--------PHGYMELTIPPKNGEYAM----EPN-CLHIWPRNA 118
Cdd:PRK08850 153 QALTAKLVVGADGANSWLR-RQMDIPltHWDYGHSALvanvrtvdPHNSVARQIFTPQGPLAFlpmsEPNmSSIVWSTEP 231

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 119 FMMIALPNMDKS-FTCTLFMSFEEfeKLPTHSDVLDFFqknfpdAIPLMGEQAlmRDFfllpaqpmisvkcspfhLKSRC 197
Cdd:PRK08850 232 LRAEALLAMSDEqFNKALTAEFDN--RLGLCEVVGERQ------AFPLKMRYA--RDF-----------------VRERV 284

                        170       180
                 ....*....|....*....|....
gi 672074959 198 VLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:PRK08850 285 ALVGDAAHTIHPLAGQGVNLGLLD 308
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
194-221 3.44e-05

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 45.72  E-value: 3.44e-05
                         10        20
                 ....*....|....*....|....*...
gi 672074959 194 KSRCVLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:PRK07608 279 APRVALVGDAAHLIHPLAGQGMNLGLRD 306
PRK06126 PRK06126
hypothetical protein; Provisional
 53-221 4.26e-05

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 45.37  E-value: 4.26e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  53 PRDITCDLIVGCDGAYSTVRAHL-----------------MKKPRFdysQQYIPH--GYMELTI-PPKNGEYAmepnclH 112
Cdd:PRK06126 172 SLTIRADYLVGCDGARSAVRRSLgisyegtsglqrdlsiyIRAPGL---AALVGHdpAWMYWLFnPDRRGVLV------A 242

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 113 IWPRNAFMMIALPnmdksftctlfmsFEEFEKLPTHSDVLDFFQKnfpdaipLMGEQAlmrDFFLLPAQPMISVK-CSPF 191
Cdd:PRK06126 243 IDGRDEWLFHQLR-------------GGEDEFTIDDVDARAFVRR-------GVGEDI---DYEVLSVVPWTGRRlVADS 299

                        170       180       190
                 ....*....|....*....|....*....|
gi 672074959 192 HLKSRCVLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:PRK06126 300 YRRGRVFLAGDAAHLFTPTGGYGMNTGIGD 329
PRK07045 PRK07045
putative monooxygenase; Reviewed
 194-254 5.71e-05

putative monooxygenase; Reviewed


Pssm-ID: 136171 [Multi-domain]  Cd Length: 388  Bit Score: 44.90  E-value: 5.71e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672074959 194 KSRCVLMGDAAHAIVPFFGQGMNAGFEDCLVFDELMDKFNND---LSVCLPEFSRFRIPDDHAI 254
Cdd:PRK07045 284 KRNVVLLGDAAHSIHPITGQGMNLAIEDAGELGACLDLHLSGqiaLADALERFERIRRPVNEAV 347
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 199-254 1.58e-04

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 43.66  E-value: 1.58e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672074959 199 LMGDAAHAIVPFFGQGMNAGFEDCLVFDELMDKFNN------DLSVcLPEFSRFRIPDDHAI 254
Cdd:PRK05714 289 LIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHAAErgerlaDVRV-LSRFERRRMPHNLAL 349
PRK08013 PRK08013
oxidoreductase; Provisional
 196-221 1.58e-04

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 43.50  E-value: 1.58e-04
                         10        20
                 ....*....|....*....|....*.
gi 672074959 196 RCVLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:PRK08013 283 RLALVGDAAHTIHPLAGQGVNLGFMD 308
PRK06847 PRK06847
hypothetical protein; Provisional
 59-249 3.88e-04

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 42.17  E-value: 3.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959  59 DLIVGCDGAYSTVRAHLM---KKPRF----------------DYSQQYIP-------------HGYMELTIPPKNGEYaM 106
Cdd:PRK06847 153 DLVVGADGLYSKVRSLVFpdePEPEYtgqgvwravlprpaevDRSLMYLGpttkagvvplsedLMYLFVTEPRPDNPR-I 231

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074959 107 EPnclHIWPRnafmmiALPNMDKSFTctlfmsfeefeklpthSDVLDFFQKNFPDAiplmgEQALMRDF--FLLPAqpmi 184
Cdd:PRK06847 232 EP---DTLAA------LLRELLAPFG----------------GPVLQELREQITDD-----AQVVYRPLetLLVPA---- 277

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672074959 185 svkcsPFHlKSRCVLMGDAAHAIVPFFGQGMNAGFEDCLVFDELMDKfNNDLSVCLPEFSRFRIP 249
Cdd:PRK06847 278 -----PWH-RGRVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELAR-HDSLEAALQAYYARRWE 335
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
194-221 5.04e-04

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 41.89  E-value: 5.04e-04
                         10        20
                 ....*....|....*....|....*...
gi 672074959 194 KSRCVLMGDAAHAIVPFFGQGMNAGFED 221
Cdd:PRK07333 279 APRFALVGDAAHGIHPIAGQGLNLGLKD 306
PRK06475 PRK06475
FAD-binding protein;
182-249 9.10e-04

FAD-binding protein;


Pssm-ID: 180582 [Multi-domain]  Cd Length: 400  Bit Score: 40.96  E-value: 9.10e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672074959 182 PMISVKCSPFHLKSRCVLMGDAAHAIVPFFGQGMNAGFEDCLVFDELMDkfNNDLSVCLPEFSRFRIP 249
Cdd:PRK06475 279 PLFEMADAQFVGPDRTIFLGDASHAVTPFAAQGAAMAIEDAAALAEALD--SDDQSAGLKRFDSVRKE 344
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 198-230 1.94e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 39.97  E-value: 1.94e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 672074959 198 VLMGDAAHAIVPFFGQGMNAGFEDClvfDELMD 230
Cdd:PRK08020 284 ALVGDAAHTINPLAGQGVNLGYRDV---DALLD 313
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
53-114 6.36e-03

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 38.02  E-value: 6.36e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672074959  53 PRDITCDLIVGCDGAYSTVRAHLMKKPRFDYSQQYIpHGYMELTIPPKNGEYamEPNCLHIW 114
Cdd:COG0644  126 GEEIRADYVVDADGARSLLARKLGLKRRSDEPQDYA-LAIKEHWELPPLEGV--DPGAVEFF 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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