|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
354-1098 |
3.27e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 3.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 354 KNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAI-ERRNEYN-LRKLDEEYKERIA 431
Cdd:TIGR02168 219 KAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVsELEEEIEeLQKELYALANEIS 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 432 ALKNELRQEREQiLQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYEnltsKLQRSLENV 511
Cdd:TIGR02168 299 RLEQQKQILRER-LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELE----AELEELESR 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 512 LAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGDGIEQDQ 591
Cdd:TIGR02168 374 LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQ 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 592 EpgsgecnplnmsiEAELVIEQLKEQHHRdlchlRLELEDKVRHYEKQLDH--TRVACEKEQVAMKQKYEQGMRTLEKQi 669
Cdd:TIGR02168 454 E-------------ELERLEEALEELREE-----LEEAEQALDAAERELAQlqARLDSLERLQENLEGFSEGVKALLKN- 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 670 selQSEIADLQGQAAvlkeahhkascrheeekkqlqmvfdeEKTQLQEELRLEHEQELKARLQQA----EESFRQEREGL 745
Cdd:TIGR02168 515 ---QSGLSGILGVLS--------------------------ELISVDEGYEAAIEAALGGRLQAVvvenLNAAKKAIAFL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 746 AQAAA--WTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQ------------RELQEGRYESEKLQEEN 811
Cdd:TIGR02168 566 KQNELgrVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvDDLDNALELAKKLRPGY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 812 SILRNEITTLNEEDSIS------NLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELS 885
Cdd:TIGR02168 646 RIVTLDGDLVRPGGVITggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 886 QKNSQNKEELKTLNQRlAEMLCQKEDPGTCTSEKWEQENESLKEELDrykvQTSTLVSSLEAELSEVKLQTHIVEQENLL 965
Cdd:TIGR02168 726 RQISALRKDLARLEAE-VEQLEERIAQLSKELTELEAEIEELEERLE----EAEEELAEAEAEIEELEAQIEQLKEELKA 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 966 LKDELERLKQLHRcpDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKLAES-SLLEHRIATIKEEREAWEEQSQDL 1044
Cdd:TIGR02168 801 LREALDELRAELT--LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDiESLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 672056301 1045 KSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQ 1098
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE 932
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
360-1123 |
9.41e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.19 E-value: 9.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 360 AALASFKAEIRHLLERVDQVVREKEKLRSDLDkaEKLKSLMASEVDDHHAaiERRNEYNLRKLDEEYKERIAAlKNELRQ 439
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIID--EKRQQLERLRREREKA--ERYQALLKEKREYEGYELLKE-KEALER 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 440 EREQILQQVGKQRVELEQ---EIEKAKTEENYIRDRLA-LSLKENNRLENELLENAEKLAEYENLTSKLQRSLEnVLAEK 515
Cdd:TIGR02169 238 QKEAIERQLASLEEELEKlteEISELEKRLEEIEQLLEeLNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIA-EKERE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 516 FGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQnALSEELDGHGDGIEQDQEPGS 595
Cdd:TIGR02169 317 LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELE-EVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 596 GECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELED-KVRHYEKQLDHTRVACE--------KEQVAMKQKYEQGMRTLE 666
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQRLSEELADLNAAIAGiEAKINELEEEKEDKALEikkqewklEQLAADLSKYEQELYDLK 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 667 KQISELQSEIADLQGQAAVLkEAHHKASCRHEEEKKQLQMVFDE----------EKTQLQEELRLEHEQELKARLQ---- 732
Cdd:TIGR02169 476 EEYDRVEKELSKLQRELAEA-EAQARASEERVRGGRAVEEVLKAsiqgvhgtvaQLGSVGERYATAIEVAAGNRLNnvvv 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 733 -------QAEESFRQEREGLAQAAAWTeeKARSLTRDLEQSHQEQLLSL------------------------------- 774
Cdd:TIGR02169 555 eddavakEAIELLKRRKAGRATFLPLN--KMRDERRDLSILSEDGVIGFavdlvefdpkyepafkyvfgdtlvvedieaa 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 775 -----------MEKHALEKEELRKELSEYHQRELQEGRYESEKLQEensiLRNEITTLNEEDSISNLKLEELNGSQEELW 843
Cdd:TIGR02169 633 rrlmgkyrmvtLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQR----LRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 844 QKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlcqkedpgTCTSEKWEQE 923
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL--------EEDLHKLEEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 924 NESLKEELDRYKVQTST-LVSSLEAELSEVKLQTHIVEQE--NLLLKDELERLKQLHRCPDLSDFQQKMCSILSYNENLL 1000
Cdd:TIGR02169 781 LNDLEARLSHSRIPEIQaELSKLEEEVSRIEARLREIEQKlnRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1001 KEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQ--------------SQDLKSQLALSQEKVQNLEDILKNVN 1066
Cdd:TIGR02169 861 GKKEELEEELEELEAALRD---LESRLGDLKKERDELEAQlrelerkieeleaqIEKKRKRLSELKAKLEALEEELSEIE 937
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 672056301 1067 LQMAQIES------DLQVTRQEKEALKQEVMSLHLQLQNAIDKdwVSETATHLSGLQGQQKRL 1123
Cdd:TIGR02169 938 DPKGEDEEipeeelSLEDVQAELQRVEEEIRALEPVNMLAIQE--YEEVLKRLDELKEKRAKL 998
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
367-1103 |
1.13e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 1.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 367 AEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERrneynLRKLDEEYKERIaalknelrQEREQILQ 446
Cdd:TIGR02168 225 LELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEE-----LRLEVSELEEEI--------EELQKELY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 447 QVGKQRVELEQEIEKakteenyIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQrslenvlaEKFGDLDPSSAEF 526
Cdd:TIGR02168 292 ALANEISRLEQQKQI-------LRERLANLERQLEELEAQLEELESKLDELAEELAELE--------EKLEELKEELESL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 527 FLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLrlpcqNALSEELDGHGDGIEQDQEPGSGECNPLNMSIE 606
Cdd:TIGR02168 357 EAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL-----NNEIERLEARLERLEDRRERLQQEIEELLKKLE 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 607 aelviEQLKEQHHRDLCHLRLELEDKVRHYEkqldhTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQG-QAAV 685
Cdd:TIGR02168 432 -----EAELKELQAELEELEEELEELQEELE-----RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERlQENL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 686 LKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQA----EESFRQEREGLAQAAA--WTEEKARSL 759
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVvvenLNAAKKAIAFLKQNELgrVTFLPLDSI 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 760 TRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQ------------RELQEGRYESEKLQEENSILRNEITTLNEEDSI 827
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVI 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 828 S------NLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLN-- 899
Cdd:TIGR02168 662 TggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEae 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 900 -QRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVsSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHR 978
Cdd:TIGR02168 742 vEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE-ELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 979 --CPDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQ 1056
Cdd:TIGR02168 821 nlRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE---LEELIEELESELEALLNERASLEEALALLRSELE 897
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 672056301 1057 NLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDK 1103
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
373-973 |
8.44e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.51 E-value: 8.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 373 LERVDQVVREKEK----LRSDLDKAEKLKSLMASEVD-DHHAAIERRNEYNLRKldEEYKERIAALKNELRQEREQI--- 444
Cdd:COG1196 188 LERLEDILGELERqlepLERQAEKAERYRELKEELKElEAELLLLKLRELEAEL--EELEAELEELEAELEELEAELael 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 445 ---LQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENV---LAEKFGD 518
Cdd:COG1196 266 eaeLEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELeeeLEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 519 LDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLpcQNALSEELDGHGDGIEQDQEpgsgec 598
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAE--LAAQLEELEEAEEALLERLE------ 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 599 nplnmSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIAD 678
Cdd:COG1196 418 -----RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 679 LQGQAAVLKEAHHK-ASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKAR 757
Cdd:COG1196 493 LLLLLEAEADYEGFlEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAG 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 758 SLTRdLEQSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSIL-------RNEITTLNEEDSISNL 830
Cdd:COG1196 573 RATF-LPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVaarleaaLRRAVTLAGRLREVTL 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 831 KLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKE 910
Cdd:COG1196 652 EGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLE 731
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 672056301 911 dpgtctsekwEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEqenllLKDELERL 973
Cdd:COG1196 732 ----------AEREELLEELLEEEELLEEEALEELPEPPDLEELERELER-----LEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
315-911 |
9.91e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.51 E-value: 9.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 315 QEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNG---IHQAALASFKAEIRHLLERVDQVVREKEKLRSDLD 391
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAeeyELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 392 KAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELRQEREQILQQVG--KQRVELEQEIEKAKTEENYI 469
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEE-ELEEAEAELAEAEEALLEAEAELAEAEEELEElaEELLEALRAAAELAAQLEEL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 470 RDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKfgdldpssAEFFLQEERLAQMRNEYEQQCRLLQD 549
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE--------AELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 550 QVDELQSELEEYQAQGRVLrlpcQNALSEELDGHGDGIEQDQEPGSGEcnplnmsIEAELVIEQLKEQHHRDLCHLRLEl 629
Cdd:COG1196 478 ALAELLEELAEAAARLLLL----LEAEADYEGFLEGVKAALLLAGLRG-------LAGAVAVLIGVEAAYEAALEAALA- 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 630 edkVRHYEKQLDHTRVAceKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFD 709
Cdd:COG1196 546 ---AALQNIVVEDDEVA--AAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 710 EEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKEL 789
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 790 SEYHQRELQEGRyeSEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSD 869
Cdd:COG1196 701 AEEEEERELAEA--EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 672056301 870 LKLKNqqLDSEnkelsqknsqnkEELKTLNQRLAEMLCQKED 911
Cdd:COG1196 779 LGPVN--LLAI------------EEYEELEERYDFLSEQRED 806
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
403-1261 |
4.30e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 74.38 E-value: 4.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 403 EVDDHHAAIERRNEYNLRKLDEEYKERIAALK------NELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALS 476
Cdd:pfam15921 60 ELDSPRKIIAYPGKEHIERVLEEYSHQVKDLQrrlnesNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQS 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 477 LKE-NNRLENEL--LENAEKLAE--YENLTSKLQR------SLENVLAEKFG---DLDPSSAEFFLQEERLAQMR----- 537
Cdd:pfam15921 140 QEDlRNQLQNTVheLEAAKCLKEdmLEDSNTQIEQlrkmmlSHEGVLQEIRSilvDFEEASGKKIYEHDSMSTMHfrslg 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 538 NEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGDGIEQ------------DQEPGSGECNPLNMSI 605
Cdd:pfam15921 220 SAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQliseheveitglTEKASSARSQANSIQS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 606 EAELVIEQLKEQHHRDLCH----------LRLELEDKVRHYEKQLDHTrvacEKEQVAMKQKYEQGmRTLEKQISElqsE 675
Cdd:pfam15921 300 QLEIIQEQARNQNSMYMRQlsdlestvsqLRSELREAKRMYEDKIEEL----EKQLVLANSELTEA-RTERDQFSQ---E 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 676 IADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEK------TQLQEEL--RLEHEQELKARLQ--QAEESFRQEREGL 745
Cdd:pfam15921 372 SGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTgnsitiDHLRRELddRNMEVQRLEALLKamKSECQGQMERQMA 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 746 A-QAAAWTEEKARSLTRDLEqSHQEQLLSLME-----KHALEKEE-----LRKELSEyHQRELQEGRYESEKLQEENSIL 814
Cdd:pfam15921 452 AiQGKNESLEKVSSLTAQLE-STKEMLRKVVEeltakKMTLESSErtvsdLTASLQE-KERAIEATNAEITKLRSRVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 815 RNEITTL-NEEDSISN---------LKLEELNGSQEELWQKIETIEQ--------------EKASIQKMVEKLKKQVSDL 870
Cdd:pfam15921 530 LQELQHLkNEGDHLRNvqtecealkLQMAEKDKVIEILRQQIENMTQlvgqhgrtagamqvEKAQLEKEINDRRLELQEF 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 871 KLKNQQLDSENKELSQKNSQNK-EELKTLN---QRLAEMLCQKEDPGTCTSEKWEQENE--SLKEELDRYKVQTSTLVSS 944
Cdd:pfam15921 610 KILKDKKDAKIRELEARVSDLElEKVKLVNagsERLRAVKDIKQERDQLLNEVKTSRNElnSLSEDYEVLKRNFRNKSEE 689
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 945 LEAELSEVKLQTHIVEQENLLLKDELERLKQLH-RCPDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADK-----LA 1018
Cdd:pfam15921 690 METTTNKLKMQLKSAQSELEQTRNTLKSMEGSDgHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKekhflKE 769
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1019 ESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQvtRQEKEalkqevmSLHLQLQ 1098
Cdd:pfam15921 770 EKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQ--RQEQE-------SVRLKLQ 840
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1099 NAIDkdwvsetathLSGLQGQQKRLSWNKLDHLMseEPELLCQESKRLQTvVQNTQADLTHSREKIRQLESNllPTKHQK 1178
Cdd:pfam15921 841 HTLD----------VKELQGPGYTSNSSMKPRLL--QPASFTRTHSNVPS-SQSTASFLSHHSRKTNALKED--PTRDLK 905
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1179 QLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRKVSQMSSLEREL--ETIHLENEGLKKKQVRLDEKLM-EMQPLRSAG 1255
Cdd:pfam15921 906 QLLQELRSVINEEPTVQLSKAEDKGRAPSLGALDDRVRDCIIESSLrsDICHSSSNSLQTEGSKSSETCSrEPVLLHAGE 985
|
....*.
gi 672056301 1256 THSPSS 1261
Cdd:pfam15921 986 LEDPSS 991
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
344-905 |
5.06e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.20 E-value: 5.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 344 LALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRN--EYNLRK 421
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 422 LDEEYKERIAALKnELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLT 501
Cdd:COG1196 296 ELARLEQDIARLE-ERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 502 SKLQRSLENVLAEKFGDLDpssaefflQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELD 581
Cdd:COG1196 375 AEAEEELEELAEELLEALR--------AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 582 GHGDGIEQDQEpgsgecnpLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQG 661
Cdd:COG1196 447 AAEEEAELEEE--------EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 662 MRTLEKQISELQS-EIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQ 740
Cdd:COG1196 519 LRGLAGAVAVLIGvEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 741 E-REGLAQAAAWTEEKAR-----SLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEEnSIL 814
Cdd:COG1196 599 AaVDLVASDLREADARYYvlgdtLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL-LEA 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 815 RNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKN------ 888
Cdd:COG1196 678 EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEaleelp 757
|
570 580
....*....|....*....|..
gi 672056301 889 -----SQNKEELKTLNQRLAEM 905
Cdd:COG1196 758 eppdlEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
531-1352 |
1.18e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.17 E-value: 1.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 531 ERLAQMRNEYEQQCRLLQDQVD------ELQSELEEYQAQGRVLRLpcqnalsEELDGHGDGIEQDQEPGSGECNPLNMS 604
Cdd:TIGR02168 189 DRLEDILNELERQLKSLERQAEkaerykELKAELRELELALLVLRL-------EELREELEELQEELKEAEEELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 605 I-EAELVIEQLKEQHHrdlchlrlELEDKVRHYEKQL-DHTRVACEKEQvaMKQKYEQGMRTLEKQISELQSEIADLQGQ 682
Cdd:TIGR02168 262 LqELEEKLEELRLEVS--------ELEEEIEELQKELyALANEISRLEQ--QKQILRERLANLERQLEELEAQLEELESK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 683 AAVLKEAHHKAscrhEEEKKQLQMVFDEEKTQLQEELRLEheQELKARLQQAEESFRQEREGLAQAaawtEEKARSLTRD 762
Cdd:TIGR02168 332 LDELAEELAEL----EEKLEELKEELESLEAELEELEAEL--EELESRLEELEEQLETLRSKVAQL----ELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 763 LEQ--SHQEQLLSLMEKHALEKEELRKELSEY----HQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELN 836
Cdd:TIGR02168 402 IERleARLERLEDRRERLQQEIEELLKKLEEAelkeLQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 837 GSQEELWQKIETIEqekaSIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLcqkEDPGTCT 916
Cdd:TIGR02168 482 RELAQLQARLDSLE----RLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRL---QAVVVEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 917 SEKWEQENESLKE---------ELDRYKVQT--STLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDF 985
Cdd:TIGR02168 555 LNAAKKAIAFLKQnelgrvtflPLDSIKGTEiqGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 986 QQkMCSILSYNENL--LKEKEVLSEELKSCADKLAESSLLEHR--IATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDI 1061
Cdd:TIGR02168 635 LE-LAKKLRPGYRIvtLDGDLVRPGGVITGGSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1062 LKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAidkdwvsetatHLSGLQGQQKRLSWNKLDHLMSEEPELLCQ 1141
Cdd:TIGR02168 714 LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL-----------SKELTELEAEIEELEERLEEAEEELAEAEA 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1142 ESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKhQKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRKVS----QM 1217
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRAELTLLN-EEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIEslaaEI 861
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1218 SSLERELETIHLENEGLKKKQVRLDEKLME--------MQPLRSAGTHSPSSHWDLQLLqqqacpmvpREQFLQLQQQLL 1289
Cdd:TIGR02168 862 EELEELIEELESELEALLNERASLEEALALlrseleelSEELRELESKRSELRRELEEL---------REKLAQLELRLE 932
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 672056301 1290 QAEKRSQHLQEELDNRtsepntvqgsqehlVNLMEERMIEVEQKLKLVKRLLQEKVNQLKEQL 1352
Cdd:TIGR02168 933 GLEVRIDNLQERLSEE--------------YSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
359-962 |
2.16e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 2.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALkNELR 438
Cdd:TIGR02169 293 KEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-RRDKLTEEYAELKEEL-EDLR 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 439 QEREQILQQVGKQRVEL---EQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENV---L 512
Cdd:TIGR02169 371 AELEEVDKEFAETRDELkdyREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKaleI 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 513 AEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVL--RLPCQNALSEELDGHGDGI--- 587
Cdd:TIGR02169 451 KKQEWKLEQLAADLSKYEQELYDLKEEYDR----VEKELSKLQRELAEAEAQARASeeRVRGGRAVEEVLKASIQGVhgt 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 588 --------EQDQEP----GSGECNplNMSIEAELV----IEQLKE---------------QHHRDLCHLRL--------- 627
Cdd:TIGR02169 527 vaqlgsvgERYATAievaAGNRLN--NVVVEDDAVakeaIELLKRrkagratflplnkmrDERRDLSILSEdgvigfavd 604
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 628 --ELEDKVR---------------------------------------------HYEKQLDHTRVACEKEQVAMKQKYEQ 660
Cdd:TIGR02169 605 lvEFDPKYEpafkyvfgdtlvvedieaarrlmgkyrmvtlegelfeksgamtggSRAPRGGILFSRSEPAELQRLRERLE 684
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 661 GMrtlEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQeelRLEHEQELKARLQQAEESFRQ 740
Cdd:TIGR02169 685 GL---KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKE---RLEELEEDLSSLEQEIENVKS 758
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 741 EREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQReLQEGRYESEKLQEENSILRNEITT 820
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEAR-LREIEQKLNRLTLEKEYLEKEIQE 837
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 821 LNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQ 900
Cdd:TIGR02169 838 LQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRK 917
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672056301 901 RLAEMLCQKedpgtctsekweqenESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQE 962
Cdd:TIGR02169 918 RLSELKAKL---------------EALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVE 964
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
754-1064 |
5.35e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.74 E-value: 5.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 754 EKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEyHQRELQEGRYESEKLQEENSILRNEITTLNEEdsisnlkLE 833
Cdd:COG1196 213 ERYRELKEELKELEAELLLLKLRELEAELEELEAELEE-LEAELEELEAELAELEAELEELRLELEELELE-------LE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 834 ELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDpg 913
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE-- 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 914 tcTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDlsdfqqkmcSIL 993
Cdd:COG1196 363 --AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE---------ALA 431
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672056301 994 SYNENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKN 1064
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
358-983 |
6.92e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.47 E-value: 6.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 358 HQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIER-RNEYN-LRKLDEEYKERIAALKN 435
Cdd:TIGR02168 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEElKEELEsLEAELEELEAELEELES 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 436 ELRQEREQILQQVGKqRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTsklqrslenvLAEK 515
Cdd:TIGR02168 373 RLEELEEQLETLRSK-VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE----------LQAE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 516 FGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLrlpcqNALSEELDGHGDGI---EQDQE 592
Cdd:TIGR02168 442 LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL-----ERLQENLEGFSEGVkalLKNQS 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 593 PGSGECNPLNMSIEAE-----------------LVIEQLkEQHHRDLCHLRLELEDKVRHYE-KQLDHTRVACEKEQVAM 654
Cdd:TIGR02168 517 GLSGILGVLSELISVDegyeaaieaalggrlqaVVVENL-NAAKKAIAFLKQNELGRVTFLPlDSIKGTEIQGNDREILK 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 655 KQKYEQG-MRTLEKQISELQSEIADLQGQAAV---LKEAHHKASCRHEEE---------------------KKQLQMVF- 708
Cdd:TIGR02168 596 NIEGFLGvAKDLVKFDPKLRKALSYLLGGVLVvddLDNALELAKKLRPGYrivtldgdlvrpggvitggsaKTNSSILEr 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 709 DEEKTQLQEELRL--EHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQ-----SHQEQLLSLMEKHALE 781
Cdd:TIGR02168 676 RREIEELEEKIEEleEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDlarleAEVEQLEERIAQLSKE 755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 782 KEELRKELSEYHQR------ELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKAS 855
Cdd:TIGR02168 756 LTELEAEIEELEERleeaeeELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAA 835
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 856 IQKMVEKLKKQVSDLKLK----NQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEkwEQENESLKEEL 931
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDieslAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEE--LRELESKRSEL 913
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 672056301 932 DRYKVQTSTLVSSLEAELSEVKLQ-THIVEQENLLLKDELERLKQLHRCPDLS 983
Cdd:TIGR02168 914 RRELEELREKLAQLELRLEGLEVRiDNLQERLSEEYSLTLEEAEALENKIEDD 966
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
450-1247 |
1.16e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 1.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 450 KQRVELEQEIEKakTEENYirDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQ 529
Cdd:TIGR02168 172 ERRKETERKLER--TRENL--DRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 530 EERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlpcQNALSEELDGHGDGIEqdqepgsgecnplnmsiEAEL 609
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEVSELEEE--------IEELQKELYALANEIS-----------------RLEQ 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 610 VIEQLKEQHHRdlchlrleLEDKVRHYEKQLDHTRvacekeqvAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEA 689
Cdd:TIGR02168 303 QKQILRERLAN--------LERQLEELEAQLEELE--------SKLDELAEELAELEEKLEELKEELESLEAELEELEAE 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 690 HHKASCRHEEEKKQLQM----VFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQ 765
Cdd:TIGR02168 367 LEELESRLEELEEQLETlrskVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 766 SHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSI--LRNEITTLNEEDSISNLKLEELNGSQEELW 843
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLerLQENLEGFSEGVKALLKNQSGLSGILGVLS 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 844 QKIETIEQ-EKA-------SIQKMV----EKLKKQVSDLKLKNQQ------LDSENKELSQKNSQNKEELKTLNQRLAEM 905
Cdd:TIGR02168 527 ELISVDEGyEAAieaalggRLQAVVvenlNAAKKAIAFLKQNELGrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 906 LCQKEDP----------GTCTSEKWEQENESLKEELDRYK-------------------VQTSTLVSSLEAELSEVKLQT 956
Cdd:TIGR02168 607 LVKFDPKlrkalsyllgGVLVVDDLDNALELAKKLRPGYRivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKI 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 957 HIVEQENLLLKDELERLKQlhrcpDLSDFQQKMCSILSYNENLLKEkevLSEELKSCADKLAESSLLEHRIATIKEEREA 1036
Cdd:TIGR02168 687 EELEEKIAELEKALAELRK-----ELEELEEELEQLRKELEELSRQ---ISALRKDLARLEAEVEQLEERIAQLSKELTE 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1037 WEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAidkdwvsetathLSGL 1116
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANL------------RERL 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1117 QGQQKRLswnkldHLMSEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLlpTKHQKQLNQsctvkpIEQEKLAL 1196
Cdd:TIGR02168 827 ESLERRI------AATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL--EALLNERAS------LEEALALL 892
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 672056301 1197 KRECEQSRKERSPTSRKVS----QMSSLERELETIHLENEGLKKKQVRLDEKLME 1247
Cdd:TIGR02168 893 RSELEELSEELRELESKRSelrrELEELREKLAQLELRLEGLEVRIDNLQERLSE 947
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
425-1093 |
1.49e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 1.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 425 EYKERIAALKNELRQEREQ------ILQQVGKQRVELEQEIEKAKTeenyirdrlALSLKEnnrlENELLENAEKLAEYE 498
Cdd:COG1196 169 KYKERKEEAERKLEATEENlerledILGELERQLEPLERQAEKAER---------YRELKE----ELKELEAELLLLKLR 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 499 NLTSKLQRSLENVLAEKfgdldpssaeffLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlpcQNALSE 578
Cdd:COG1196 236 ELEAELEELEAELEELE------------AELEELEAELAELEAELEELRLELEELELELEEAQAE--------EYELLA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 579 ELDGHGDGIEQDQEpgsgecnplnMSIEAELVIEQLKEQhhrdlchlRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKy 658
Cdd:COG1196 296 ELARLEQDIARLEE----------RRRELEERLEELEEE--------LAELEEELEELEEELEELEEELEEAEEELEEA- 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 659 EQGMRTLEKQISELQSEIADLQgqaavlkeahhkascrhEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESF 738
Cdd:COG1196 357 EAELAEAEEALLEAEAELAEAE-----------------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL 419
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 739 RQEREGLAQAAAwTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEI 818
Cdd:COG1196 420 EEELEELEEALA-ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 819 TTLNEEDSISNLKLEELNGSQEELWQKI-ETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKT 897
Cdd:COG1196 499 AEADYEGFLEGVKAALLLAGLRGLAGAVaVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 898 LNQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLH 977
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSA 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 978 RcPDLSDFQ--QKMCSILSYNENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKV 1055
Cdd:COG1196 659 G-GSLTGGSrrELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 672056301 1056 QNLEDILKNVNLQMAQIES----DLQVTRQEKEALKQEVMSL 1093
Cdd:COG1196 738 LEELLEEEELLEEEALEELpeppDLEELERELERLEREIEAL 779
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
381-1097 |
5.82e-11 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 67.30 E-value: 5.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 381 REKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNeynlrKLDEEYkERIAALKNELRQEREQILQQVGKQRVELEQEIE 460
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAE-----LLTLRS-QLLTLCTPCMPDTYHERKQVLEKELKHLREALQ 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 461 KAKTEENYIRdRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVlaekfgDLDPSSAEFFLQEERLAQMRNEY 540
Cdd:TIGR00618 237 QTQQSHAYLT-QKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERI------NRARKAAPLAAHIKAVTQIEQQA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 541 EQQCRLLQDQVDELQSELEEYQaqgrvlrlpcqNALSEELDGHGDgiEQDQEPGSGECNPLNMSIEAELVIEQLKEQHHR 620
Cdd:TIGR00618 310 QRIHTELQSKMRSRAKLLMKRA-----------AHVKQQSSIEEQ--RRLLQTLHSQEIHIRDAHEVATSIREISCQQHT 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 621 DLCHLRLELEDKvrhyekqldhtRVACEKEQVAMKQKYEqgMRTLEKQISELQSEIADLQGQAAVLKeahhkASCRHEEE 700
Cdd:TIGR00618 377 LTQHIHTLQQQK-----------TTLTQKLQSLCKELDI--LQREQATIDTRTSAFRDLQGQLAHAK-----KQQELQQR 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 701 KKQLQMVFDEEKTQLQEeLRLEHEQELKARLQQAEESFRQEREGLAQaaaWTEEKARSLTRDLEQSHQEQLLSLMEKHaL 780
Cdd:TIGR00618 439 YAELCAAAITCTAQCEK-LEKIHLQESAQSLKEREQQLQTKEQIHLQ---ETRKKAVVLARLLELQEEPCPLCGSCIH-P 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 781 EKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMV 860
Cdd:TIGR00618 514 NPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNIT 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 861 EKLKKQV-SDLKLKNQQLDSENKELSQKN-SQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENE-----SLKEELDR 933
Cdd:TIGR00618 594 VRLQDLTeKLSEAEDMLACEQHALLRKLQpEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVrehalSIRVLPKE 673
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 934 YKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHR-----CPDLSDFQQKMCSILSYNENLLKEKEVLSE 1008
Cdd:TIGR00618 674 LLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDRefneiENASSSLGSDLAAREDALNQSLKELMHQAR 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1009 E-LKSCADKLAESSL-----------LEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDL 1076
Cdd:TIGR00618 754 TvLKARTEAHFNNNEevtaalqtgaeLSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQF 833
|
730 740
....*....|....*....|.
gi 672056301 1077 QVTRQEKEALKQEVMSLHLQL 1097
Cdd:TIGR00618 834 LSRLEEKSATLGEITHQLLKY 854
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
427-975 |
2.54e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.09 E-value: 2.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 427 KERIAALKNELRQEREQILQQVGKQRVELEQ------EIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENL 500
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPElreeleKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 501 TSKLQRSLEnVLAEKFGDLdPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAqgRVLRLPCQNALSEEL 580
Cdd:PRK03918 268 IEELKKEIE-ELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEE--RIKELEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 581 DGHGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEqhhRDLCHLRLELEDKVRHYEKQldhtrvacekeqvamKQKYEQ 660
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYEEAKAKKEELERLKK---RLTGLTPEKLEKELEELEKA---------------KEEIEE 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 661 GMRTLEKQISELQSEIADLQGQAAVLKEAHHKAS-CRH---EEEKKQLQMVFDEEKTQLQEELR--LEHEQELKARLQQA 734
Cdd:PRK03918 406 EISKITARIGELKKEIKELKKAIEELKKAKGKCPvCGReltEEHRKELLEEYTAELKRIEKELKeiEEKERKLRKELREL 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 735 EESFRQEREglaqaaawteekarsltrdleqshqeqlLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSIL 814
Cdd:PRK03918 486 EKVLKKESE----------------------------LIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 815 RNEITTLNEEDSisnlKLEELNGSQEELWQKIETIEQEKASIQKMVEKLK-KQVSDLKLKNQQLDSENKE-LSQKNS-QN 891
Cdd:PRK03918 538 KGEIKSLKKELE----KLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEyLELKDAeKE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 892 KEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQT-----------STLVSSLEAELSEVKLQTHIVE 960
Cdd:PRK03918 614 LEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyeelreeylelSRELAGLRAELEELEKRREEIK 693
|
570
....*....|....*
gi 672056301 961 QENLLLKDELERLKQ 975
Cdd:PRK03918 694 KTLEKLKEELEEREK 708
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
718-1410 |
2.79e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 2.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 718 ELRLEHEQELKARLQQAEESFRQEREGLaQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYhQREL 797
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSL-ERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEA-EEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 798 QEGRYESEKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQL 877
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEE-------IEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEEL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 878 DSENKELSQKNSQNKEELKTLNQRLAEMLCQKEdpgtcTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSevKLQTH 957
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEELKEELESLEAELE-----ELEAELEELESRLEELEEQLETLRSKVAQLELQIA--SLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 958 IVEQENLL--LKDELERLKQLHRCPDLSDFQQKMCSILSYNENLLKEKEVLSEELkscADKLAESSLLEHRIATIKEERE 1035
Cdd:TIGR02168 402 IERLEARLerLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEEL---ERLEEALEELREELEEAEQALD 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1036 AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIE---------SDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWV 1106
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSglsgilgvlSELISVDEGYEAAIEAALGGRLQAVVVENLNAA 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1107 SETATHLSglQGQQKRLSWNKLDHLMSEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKH-----QKQLN 1181
Cdd:TIGR02168 559 KKAIAFLK--QNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvvddlDNALE 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1182 QSctvKPIEQEKLALKRECEQSRKERSPTSRKVSQMSS-LERELETIHLENEgLKKKQVRLDEKLMEMQPLRSAGTHSPS 1260
Cdd:TIGR02168 637 LA---KKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSiLERRREIEELEEK-IEELEEKIAELEKALAELRKELEELEE 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1261 SHWDLQLLQQQAcpmvpREQFLQLQQQLLQAEKRSQHLQEELDNRTSEPNTVQGSQEHLvnlmEERMIEVEQKLKLVKR- 1339
Cdd:TIGR02168 713 ELEQLRKELEEL-----SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL----EERLEEAEEELAEAEAe 783
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672056301 1340 --LLQEKVNQLKEQLCKNSKT----DAMVKDLYVENAQLLKALEMTEQRQKTAEKKNFLLEEKIASLSTIVRNLAPA 1410
Cdd:TIGR02168 784 ieELEAQIEQLKEELKALREAldelRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE 860
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
816-1248 |
2.31e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.88 E-value: 2.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 816 NEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKL----------KNQQLDSENKELS 885
Cdd:TIGR04523 145 TEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELllsnlkkkiqKNKSLESQISELK 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 886 QKNSQNKEELKTLNQRLAEM---LCQKEDPGTCTSEKWEQENESLKEELDRYKvQTSTLVSSLEAELSEVKLQTHIVEQE 962
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKtteISNTQTQLNQLKDEQNKIKKQLSEKQKELE-QNNKKIKELEKQLNQLKSEISDLNNQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 963 -----NLLLKDELERLKQLHRC--PDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKLAESsllEHRIATIKEERE 1035
Cdd:TIGR04523 304 keqdwNKELKSELKNQEKKLEEiqNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEK---QNEIEKLKKENQ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1036 AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVsetathlsg 1115
Cdd:TIGR04523 381 SYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSV--------- 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1116 lqgqqKRLSWNKLDHLMSEEP---ELLCQESKRLQTVVQNTQADLTHSREKIRQLesnllpTKHQKQLNQscTVKPIEQE 1192
Cdd:TIGR04523 452 -----KELIIKNLDNTRESLEtqlKVLSRSINKIKQNLEQKQKELKSKEKELKKL------NEEKKELEE--KVKDLTKK 518
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 1193 KLALKRECEQSRKERsptSRKVSQMSSLERELETIH--LENEGLKKKQVRLDEKLMEM 1248
Cdd:TIGR04523 519 ISSLKEKIEKLESEK---KEKESKISDLEDELNKDDfeLKKENLEKEIDEKNKEIEEL 573
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
396-1011 |
2.77e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 58.70 E-value: 2.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 396 LKSLMASEVDDHHAAIERRNEYN--LRKLDEEYKERIAALKNEL-------RQEREQILQQVGKQRVELEQEIEKAKTEE 466
Cdd:pfam12128 267 YKSDETLIASRQEERQETSAELNqlLRTLDDQWKEKRDELNGELsaadaavAKDRSELEALEDQHGAFLDADIETAAADQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 467 NYIrDRLALSLKENNRLENELLENAEKL-AEYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQeerLAQMRNEYEQQCR 545
Cdd:pfam12128 347 EQL-PSWQSELENLEERLKALTGKHQDVtAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQ---LAVAEDDLQALES 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 546 LLQDQVDELQSELEEyQAQGRVLRLpcqnalsEELDGHGDGIEQDQEpgsgecNPLNMSIEAELVIEQLKEQHHRDLCHL 625
Cdd:pfam12128 423 ELREQLEAGKLEFNE-EEYRLKSRL-------GELKLRLNQATATPE------LLLQLENFDERIERAREEQEAANAEVE 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 626 RLELEDKV--RHYEKQLDHTRVaCEKEQVAMKQKYEQGMRTLEKQISELqseIADLQGQAAVLKEAHHKASCRHEEEKKQ 703
Cdd:pfam12128 489 RLQSELRQarKRRDQASEALRQ-ASRRLEERQSALDELELQLFPQAGTL---LHFLRKEAPDWEQSIGKVISPELLHRTD 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 704 LQMVFDEEKT--------------QLQEELRLEHEQELKARLQQAEESFRQER-------EGLAQAAAWTEEKARSLTRD 762
Cdd:pfam12128 565 LDPEVWDGSVggelnlygvkldlkRIDVPEWAASEEELRERLDKAEEALQSARekqaaaeEQLVQANGELEKASREETFA 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 763 LE--QSHQEQLLSLMEKHALEKEELRKELSEyHQRELQEGRyesEKLQEENSILRNEITTLNEEdsisnLKLEELNGSQE 840
Cdd:pfam12128 645 RTalKNARLDLRRLFDEKQSEKDKKNKALAE-RKDSANERL---NSLEAQLKQLDKKHQAWLEE-----QKEQKREARTE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 841 ELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENK-ELS------QKNSQNKEELKTLNQRLAEmlCQKEDPG 913
Cdd:pfam12128 716 KQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKrDLAslgvdpDVIAKLKREIRTLERKIER--IAVRRQE 793
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 914 TCT-----SEKWEQEN--------------ESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLK 974
Cdd:pfam12128 794 VLRyfdwyQETWLQRRprlatqlsnieraiSELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLA 873
|
650 660 670
....*....|....*....|....*....|....*..
gi 672056301 975 QLHRCPDLSDFQQKMCSILSYNENLLKEKEVLSEELK 1011
Cdd:pfam12128 874 TLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVK 910
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
361-823 |
2.87e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.51 E-value: 2.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 361 ALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLR-----KLDEEYKERIAALKN 435
Cdd:PRK02224 238 EADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDllaeaGLDDADAEAVEARRE 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 436 ELRQEREQILQQVGKQRV---ELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENvL 512
Cdd:PRK02224 318 ELEDRDEELRDRLEECRVaaqAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEE-L 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 513 AEKFGDL--DPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlPCQNALSEEldGHGD 585
Cdd:PRK02224 397 RERFGDApvDLGNAEDFLEElreerDELREREAELEATLRTARERVEEAEALLEAGKCP------ECGQPVEGS--PHVE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 586 GIEQDQEPGSgecnplnmSIEAELviEQLKEQhhRDLCHLRLELEDKVRHYEKQLDHTRvacEKEQVAMKQKYEQGMRTL 665
Cdd:PRK02224 469 TIEEDRERVE--------ELEAEL--EDLEEE--VEEVEERLERAEDLVEAEDRIERLE---ERREDLEELIAERRETIE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 666 EK--QISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQmVFDEEKTQLQEEL----RLEHEQELKARLQQAEESFR 739
Cdd:PRK02224 534 EKreRAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA-ELNSKLAELKERIesleRIRTLLAAIADAEDEIERLR 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 740 QEREGLAQAAAWTEEK---ARSLTRDLEQSHQEQLLSlmekhalEKEELRKELSEYHQR---ELQEGRYESEKLQEENSI 813
Cdd:PRK02224 613 EKREALAELNDERRERlaeKRERKRELEAEFDEARIE-------EAREDKERAEEYLEQveeKLDELREERDDLQAEIGA 685
|
490
....*....|
gi 672056301 814 LRNEITTLNE 823
Cdd:PRK02224 686 VENELEELEE 695
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
404-863 |
5.65e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.76 E-value: 5.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 404 VDDHHAAIERRNEYNlrkldeeYKERIAALKNEL----------RQEREQILQQVGKQRVELEQEIEKAKTEEnyirdrl 473
Cdd:TIGR02168 628 VDDLDNALELAKKLR-------PGYRIVTLDGDLvrpggvitggSAKTNSSILERRREIEELEEKIEELEEKI------- 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 474 alslkenNRLENELLENAEKLAEYENLTSKLQRslenvlaekfgDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDE 553
Cdd:TIGR02168 694 -------AELEKALAELRKELEELEEELEQLRK-----------ELEELSRQISALRKDLARLEAEVEQ----LEERIAQ 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 554 LQSELEEYQAQgRVLRLPCQNALSEELDGHGDGIEQDQEpgsgecnplnmsieaelVIEQLKEQHhrdlchlrLELEDKV 633
Cdd:TIGR02168 752 LSKELTELEAE-IEELEERLEEAEEELAEAEAEIEELEA-----------------QIEQLKEEL--------KALREAL 805
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 634 RHYEKQLDHTRVAcekeqvamKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEekkqlqmvFDEEKT 713
Cdd:TIGR02168 806 DELRAELTLLNEE--------AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE--------LEELIE 869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 714 QLQEElrLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLE--QSHQEQLLSLMEKHALEKEELRKELSE 791
Cdd:TIGR02168 870 ELESE--LEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEelREKLAQLELRLEGLEVRIDNLQERLSE 947
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672056301 792 YHQRELQEGRYESEKLQEENSILRNEITTLNEE-DSISNLKL------EELNGSQEELWQKIETIEQEKASIQKMVEKL 863
Cdd:TIGR02168 948 EYSLTLEEAEALENKIEDDEEEARRRLKRLENKiKELGPVNLaaieeyEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
418-1065 |
7.98e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.95 E-value: 7.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 418 NLRKLDEEYKeriaaLKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEY 497
Cdd:TIGR04523 104 DLSKINSEIK-----NDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 498 ENLTSKLQRSLENVLAEKFGD-LDPSSAEFFLQEERLAQMR-NEYEQQCRLLQDQVDELQSELEEYQAQgrvlRLPCQNA 575
Cdd:TIGR04523 179 EKEKLNIQKNIDKIKNKLLKLeLLLSNLKKKIQKNKSLESQiSELKKQNNQLKDNIEKKQQEINEKTTE----ISNTQTQ 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 576 LSEELDGHGDGIEQDQepgsgecNPLNMSIEAELVIEQLKEQhhrdLCHLRLELEDkvrhyekqldhtrVACEKEQVAMK 655
Cdd:TIGR04523 255 LNQLKDEQNKIKKQLS-------EKQKELEQNNKKIKELEKQ----LNQLKSEISD-------------LNNQKEQDWNK 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 656 QKYEQgMRTLEKQISELQSEIADLQGQAAVLKEAHHKAscrhEEEKKQLQmvfdEEKTQLQEELRlEHEQELKaRLQQAE 735
Cdd:TIGR04523 311 ELKSE-LKNQEKKLEEIQNQISQNNKIISQLNEQISQL----KKELTNSE----SENSEKQRELE-EKQNEIE-KLKKEN 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 736 ESFRQEREGLaqaaawteekaRSLTRDLEQSHQEQllslmEKHALEKEELRKELseyhQRELQEGRYESEKLQEENSILR 815
Cdd:TIGR04523 380 QSYKQEIKNL-----------ESQINDLESKIQNQ-----EKLNQQKDEQIKKL----QQEKELLEKEIERLKETIIKNN 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 816 NEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQvsdLKLKNQQLD---SENKELSQKNSQNK 892
Cdd:TIGR04523 440 SEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE---LKSKEKELKklnEEKKELEEKVKDLT 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 893 EELKTLNQRLAEMlcqkedpgtcTSEKWEQENE--SLKEELDrykvqtstlvsSLEAELSEVKLQTHIVEQENlllkdEL 970
Cdd:TIGR04523 517 KKISSLKEKIEKL----------ESEKKEKESKisDLEDELN-----------KDDFELKKENLEKEIDEKNK-----EI 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 971 ERLKQLHRCPDLSDFQQkmcsilsynENLLKEKEVLSEELKS-CADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLA 1049
Cdd:TIGR04523 571 EELKQTQKSLKKKQEEK---------QELIDQKEKEKKDLIKeIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKN 641
|
650
....*....|....*.
gi 672056301 1050 LSQEKVQNLEDILKNV 1065
Cdd:TIGR04523 642 KLKQEVKQIKETIKEI 657
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
315-1045 |
8.41e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 57.29 E-value: 8.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 315 QEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNGIHQAALAsfKAEIRHLLERVDQVVREKEKLRSDLDKAE 394
Cdd:pfam02463 276 EEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK--KAEKELKKEKEEIEELEKELKELEIKREA 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 395 KLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLA 474
Cdd:pfam02463 354 EEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILE 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 475 LSLKENNRLENELLENAEKLAEYENLTSKLQRSLENV-----------------LAEKFGDLDPSSAEFFLQEERLAQMR 537
Cdd:pfam02463 434 EEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSedllketqlvklqeqleLLLSRQKLEERSQKESKARSGLKVLL 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 538 NEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELdghGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEQ 617
Cdd:pfam02463 514 ALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSAT---ADEVEERQKLVRALTELPLGARKLRLLIPKLKLP 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 618 hhrDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRH 697
Cdd:pfam02463 591 ---LKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKAS 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 698 EEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSH----QEQLLS 773
Cdd:pfam02463 668 LSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEElkllKQKIDE 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 774 LMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEK 853
Cdd:pfam02463 748 EEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQE 827
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 854 ASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEdpgtctsekwEQENESLKEELDR 933
Cdd:pfam02463 828 EKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKL----------KDELESKEEKEKE 897
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 934 YKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMcSILSYNENLLKEKEVLSEELKSC 1013
Cdd:pfam02463 898 EKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEEN-NKEEEEERNKRLLLAKEELGKVN 976
|
730 740 750
....*....|....*....|....*....|..
gi 672056301 1014 ADKLAESSLLEHRIATIKEEREAWEEQSQDLK 1045
Cdd:pfam02463 977 LMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
355-824 |
9.17e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 9.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 355 NGIHQAALasfKA-EIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMAS-----EVDDHHAAIERRNEyNLRKLDEEY-- 426
Cdd:COG4913 238 ERAHEALE---DArEQIELLEPIRELAERYAAARERLAELEYLRAALRLwfaqrRLELLEAELEELRA-ELARLEAELer 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 427 -KERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEenyiRDRLALSLKENNRLENEL-LENAEKLAEYENLTSKL 504
Cdd:COG4913 314 lEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERE----LEERERRRARLEALLAALgLPLPASAEEFAALRAEA 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 505 QRSLENVlaekfgdldpsSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQG-----RVLRLpcQNALSEE 579
Cdd:COG4913 390 AALLEAL-----------EEELEALEEALAEAEAALRD----LRRELRELEAEIASLERRKsnipaRLLAL--RDALAEA 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 580 LdghgdGIEQDQEPGSGE-------CNPLNMSIEAEL-------------------VIEQLKEQHHRDLCHLRLELEDKV 633
Cdd:COG4913 453 L-----GLDEAELPFVGElievrpeEERWRGAIERVLggfaltllvppehyaaalrWVNRLHLRGRLVYERVRTGLPDPE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 634 R-------------------------HYEKQLDHTRVACEKE----------QVAMKQKYEQG----------------- 661
Cdd:COG4913 528 RprldpdslagkldfkphpfrawleaELGRRFDYVCVDSPEElrrhpraitrAGQVKGNGTRHekddrrrirsryvlgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 662 ----MRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKT-QLQEELRlEHEQELK-------- 728
Cdd:COG4913 608 nrakLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVaSAEREIA-ELEAELErldassdd 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 729 -ARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQsHQEQLLSLMEKH----ALEKEELRKELSEYHQRELQEGRYE 803
Cdd:COG4913 687 lAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQ-AEEELDELQDRLeaaeDLARLELRALLEERFAAALGDAVER 765
|
570 580
....*....|....*....|...
gi 672056301 804 --SEKLQEENSILRNEITTLNEE 824
Cdd:COG4913 766 elRENLEERIDALRARLNRAEEE 788
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
666-1254 |
1.17e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.61 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 666 EKQISELQSEIADLQGQAAVLkeahhkascrhEEEKKQLQMVFDE-EKTQLQEELRLEHEQELKARLQQAEESFRQEREG 744
Cdd:PRK03918 206 LREINEISSELPELREELEKL-----------EKEVKELEELKEEiEELEKELESLEGSKRKLEEKIRELEERIEELKKE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 745 LAQaaawTEEKARSLTRdleqshqeqllslMEKHALEKEELRKELSEYHQrELQEGRYESEKLQEENSILRNEITTLNEE 824
Cdd:PRK03918 275 IEE----LEEKVKELKE-------------LKEKAEEYIKLSEFYEEYLD-ELREIEKRLSRLEEEINGIEERIKELEEK 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 825 DSisnlKLEELNGSQEELWQKIETIE------QEKASIQKMVEKLKKQVSDLKLknQQLDSENKELSQKNSQNKEELKTL 898
Cdd:PRK03918 337 EE----RLEELKKKLKELEKRLEELEerhelyEEAKAKKEELERLKKRLTGLTP--EKLEKELEELEKAKEEIEEEISKI 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 899 NQRLAEMLCQKED-----------PGTCTSEKWEQENESLKEELDRYKVQtstlVSSLEAELSEVKLQTHIVEQENLLLK 967
Cdd:PRK03918 411 TARIGELKKEIKElkkaieelkkaKGKCPVCGRELTEEHRKELLEEYTAE----LKRIEKELKEIEEKERKLRKELRELE 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 968 DELERLKQLHRCPDLSDFQQKMCSILS-YNENLLKEKEVLSEELKSCADKLaessllEHRIATIKEEREAWEEqsqdLKS 1046
Cdd:PRK03918 487 KVLKKESELIKLKELAEQLKELEEKLKkYNLEELEKKAEEYEKLKEKLIKL------KGEIKSLKKELEKLEE----LKK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1047 QLALSQEKVQNLEDILKNVNLQMAQI----ESDLQVTRQEKEALKQEVMSLhlqlqnaidKDWVSEtathlsgLQGQQKR 1122
Cdd:PRK03918 557 KLAELEKKLDELEEELAELLKELEELgfesVEELEERLKELEPFYNEYLEL---------KDAEKE-------LEREEKE 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1123 LSWNKLDHLMSEEPellcqeskrlqtvVQNTQADLTHSREKIRQLESNLLPTKHQKqlnqsctvkpIEQEKLALKREceq 1202
Cdd:PRK03918 621 LKKLEEELDKAFEE-------------LAETEKRLEELRKELEELEKKYSEEEYEE----------LREEYLELSRE--- 674
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 672056301 1203 srkerspTSRKVSQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSA 1254
Cdd:PRK03918 675 -------LAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKA 719
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
359-564 |
1.58e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.08 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDkaeklkslmasEVDDHHAAIERRNEYNLRKLD-EEYKERIAALKNEL 437
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELD-----------ALQERREALQRLAEYSWDEIDvASAEREIAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 438 RQERE--QILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLenvLAEK 515
Cdd:COG4913 678 ERLDAssDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL---LEER 754
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 672056301 516 FGDLdpssaeffLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQ 564
Cdd:COG4913 755 FAAA--------LGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
401-975 |
2.30e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.92 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 401 ASEVDDHHAAIERRNEYNLRKLdEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEEN------YIRDRLA 474
Cdd:PTZ00121 1175 AKKAEAARKAEEVRKAEELRKA-EDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEeakkaeEERNNEE 1253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 475 LSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDP-SSAEFFLQEERLAQMRNEYEQQCRLLQDQVDE 553
Cdd:PTZ00121 1254 IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEkKKADEAKKKAEEAKKADEAKKKAEEAKKKADA 1333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 554 LQSELEEYQAQGRVLRLPCQNAL--SEELDGHGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEQHHRDlcHLRLELED 631
Cdd:PTZ00121 1334 AKKKAEEAKKAAEAAKAEAEAAAdeAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED--KKKADELK 1411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 632 KVRHYEKQLDHTRVACEKEQVA--MKQKYEQGMRTLE-KQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVF 708
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAEEKKKAdeAKKKAEEAKKADEaKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 709 DEEKTQLQEELRLEHEQELKA-RLQQAEESFRQEREGLAQAAAWTEE--KARSLTRDLEQSHQEQLLSLMEKHALEKEEL 785
Cdd:PTZ00121 1492 AEEAKKKADEAKKAAEAKKKAdEAKKAEEAKKADEAKKAEEAKKADEakKAEEKKKADELKKAEELKKAEEKKKAEEAKK 1571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 786 RKELSEYHQRELQEGRYESEKLQEENSILRNEIttlneedsiSNLKLEELNGSQEELWQKIETIEQEKasIQKMVEKLKK 865
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEE---------KKMKAEEAKKAEEAKIKAEELKKAEE--EKKKVEQLKK 1640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 866 QVSDLKLKNQQLDSENKELSQKNSQNKEElktlnqrlaemlcQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSL 945
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAAEEAKK-------------AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEEL 1707
|
570 580 590
....*....|....*....|....*....|
gi 672056301 946 EAELSEVKLQTHIVEQENLLLKDELERLKQ 975
Cdd:PTZ00121 1708 KKKEAEEKKKAEELKKAEEENKIKAEEAKK 1737
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
698-1090 |
3.00e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.16 E-value: 3.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 698 EEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARsltrdlEQSHQEQLLSLMEK 777
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQE------LEALEAELAELPER 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 778 haleKEELRKELSEYHQRELQEgryesEKLQEENSILRNEITTLNEEDSISNLK-LEELNGSQEELWQKIETIEQEKASI 856
Cdd:COG4717 148 ----LEELEERLEELRELEEEL-----EELEAELAELQEELEELLEQLSLATEEeLQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 857 QKMVEKLKKQVSDLklknqQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTS------------------- 917
Cdd:COG4717 219 QEELEELEEELEQL-----ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlgllallflll 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 918 EKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRcpDLSDFQQKM--CSILSY 995
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR--EAEELEEELqlEELEQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 996 NENLLKEKEVLSEE--------LKSCADKLAESSLLEHRIATIKEER---------EAWEEQSQDLKSQLALSQEKVQNL 1058
Cdd:COG4717 372 IAALLAEAGVEDEEelraaleqAEEYQELKEELEELEEQLEELLGELeellealdeEELEEELEELEEELEELEEELEEL 451
|
410 420 430
....*....|....*....|....*....|....
gi 672056301 1059 EDILKNVNLQMAQIESD--LQVTRQEKEALKQEV 1090
Cdd:COG4717 452 REELAELEAELEQLEEDgeLAELLQELEELKAEL 485
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
438-1010 |
5.77e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 54.41 E-value: 5.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 438 RQEREqiLQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKL---QRSLENVLAE 514
Cdd:pfam01576 2 RQEEE--MQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLaarKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 515 KFGDLDPssaefflQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVLRLP--CQNALSEELDGHGDGIEQDQE 592
Cdd:pfam01576 80 LESRLEE-------EEERSQQLQNEKKK----MQQHIQDLEEQLDEEEAARQKLQLEkvTTEAKIKKLEEDILLLEDQNS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 593 PGSGECNPLNMSIEAELVIEQLKEQHHRDLCHLRL-------ELEDKVRHYEKQldhtrvacEKEQVAMKQKYEQGMRTL 665
Cdd:pfam01576 149 KLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNkheamisDLEERLKKEEKG--------RQELEKAKRKLEGESTDL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 666 EKQISELQSEIADLQGQAAVLKEAHHKASCRHEEE---KKQLQMVFDEEKTQ---LQEELRLEHEQELKARLQQAE---- 735
Cdd:pfam01576 221 QEQIAELQAQIAELRAQLAKKEEELQAALARLEEEtaqKNNALKKIRELEAQiseLQEDLESERAARNKAEKQRRDlgee 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 736 -ESFRQERE-GLAQAAAWTEEKAR------SLTRDLEQ---SHQEQLLSLMEKHALEKEELRKELsEYHQRELQEGRYES 804
Cdd:pfam01576 301 lEALKTELEdTLDTTAAQQELRSKreqevtELKKALEEetrSHEAQLQEMRQKHTQALEELTEQL-EQAKRNKANLEKAK 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 805 EKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKEL 884
Cdd:pfam01576 380 QALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 885 SQKNSQNKEELKTLNQRLAEMLCQKEDPGTcTSEKWEQENESLKEELDRYKVQTSTL---VSSLEAELSEVKLQthiVEQ 961
Cdd:pfam01576 460 SKDVSSLESQLQDTQELLQEETRQKLNLST-RLRQLEDERNSLQEQLEEEEEAKRNVerqLSTLQAQLSDMKKK---LEE 535
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 672056301 962 ENLLLKDELERLKQLHRcpDLSDFQQKMCSILSYNENLLKEKEVLSEEL 1010
Cdd:pfam01576 536 DAGTLEALEEGKKRLQR--ELEALTQQLEEKAAAYDKLEKTKNRLQQEL 582
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
838-1125 |
5.83e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 5.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 838 SQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlcqkedpgtcts 917
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL------------ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 918 ekwEQENESLKEELDRYKVQTSTLVSSLEaelsevklQTHIVEQENLLLKDElerlkqlhrcpDLSDFQQKMCSILSYNE 997
Cdd:COG4942 89 ---EKEIAELRAELEAQKEELAELLRALY--------RLGRQPPLALLLSPE-----------DFLDAVRRLQYLKYLAP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 998 NLLKEKEVLSEELkscadklaessllehriATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQ 1077
Cdd:COG4942 147 ARREQAEELRADL-----------------AELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELA 209
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 672056301 1078 VTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSW 1125
Cdd:COG4942 210 ELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKLPW 257
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
366-973 |
1.53e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 366 KAEIRHLLERVDQVVREKEKLRSDLDKAEKLKslmasEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNElrQEREQIL 445
Cdd:PTZ00121 1259 EARMAHFARRQAAIKAEEARKADELKKAEEKK-----KADEAKKAEEKKKADEAKKKAEEAKKADEAKKKA--EEAKKKA 1331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 446 QQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLEnvlAEKFGDLDPSSAE 525
Cdd:PTZ00121 1332 DAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE---AKKKAEEDKKKAD 1408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 526 FFLQEERLAQMRNEYEQQCRLLQdQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGDGIEQDQEpgsgecnpLNMSI 605
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEKK-KADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE--------AKKKA 1479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 606 EAELVIEQLK---EQHHRDLCHLRLELEDKVRHYE-KQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQG 681
Cdd:PTZ00121 1480 EEAKKADEAKkkaEEAKKKADEAKKAAEAKKKADEaKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 682 QAAVLK-------EAHHKASCRHEEEKKQLQ--------MVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLA 746
Cdd:PTZ00121 1560 AEEKKKaeeakkaEEDKNMALRKAEEAKKAEearieevmKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLK 1639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 747 QAAAWTEEKARSLTRDLEQSH--QEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESE------------------- 805
Cdd:PTZ00121 1640 KKEAEEKKKAEELKKAEEENKikAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEakkaeelkkkeaeekkkae 1719
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 806 ---KLQEENSILRNEITTLNEEDSisnLKLEELNGSQEELwQKIETIEQEKASIQKMVEKLKKQV--SDLKLKNQQLDSE 880
Cdd:PTZ00121 1720 elkKAEEENKIKAEEAKKEAEEDK---KKAEEAKKDEEEK-KKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRME 1795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 881 NKELSQKNSQNKEELKTLNQRLAEML-CQKEDPGTCTSEKWEQENESLKE--ELDRYKVQTSTLVSSLEAELSEVKLQTH 957
Cdd:PTZ00121 1796 VDKKIKDIFDNFANIIEGGKEGNLVInDSKEMEDSAIKEVADSKNMQLEEadAFEKHKFNKNNENGEDGNKEADFNKEKD 1875
|
650
....*....|....*...
gi 672056301 958 IVE--QENLLLKDELERL 973
Cdd:PTZ00121 1876 LKEddEEEIEEADEIEKI 1893
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
368-581 |
1.61e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 52.62 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 368 EIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALkNELRQEREQILQQ 447
Cdd:PRK05771 44 RLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEI-SELENEIKELEQE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 448 vgKQRVE----LEQEIEKAKTEENYIrdRLALSLKENNRLENELLENAEKLAEYENLTSKL------QRSLENVLAEKFG 517
Cdd:PRK05771 123 --IERLEpwgnFDLDLSLLLGFKYVS--VFVGTVPEDKLEELKLESDVENVEYISTDKGYVyvvvvvLKELSDEVEEELK 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672056301 518 DLDPSSAEFFlQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELD 581
Cdd:PRK05771 199 KLGFERLELE-EEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELE 261
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
671-1171 |
1.64e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 671 ELQSEIADLQGQAAVLKEAHHKAscrhEEEKKQLQmvfdeektqlqeelRLEHEQELKARLQQAEESFRQEREGLAQAAA 750
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEAL----EDAREQIE--------------LLEPIRELAERYAAARERLAELEYLRAALRL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 751 WTEEKARSLTRDLEQSHQEQLLSLMEKHAL---EKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNE---- 823
Cdd:COG4913 284 WFAQRRLELLEAELEELRAELARLEAELERleaRLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERrrar 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 824 -EDSISNLKL------EELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELK 896
Cdd:COG4913 364 lEALLAALGLplpasaEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 897 TLNQRLAEMLCQKED--PGTC-------TSEKWEQ---------------------------ENESLKEELDRYKVQTST 940
Cdd:COG4913 444 ALRDALAEALGLDEAelPFVGelievrpEEERWRGaiervlggfaltllvppehyaaalrwvNRLHLRGRLVYERVRTGL 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 941 ----LVSSLEAELSE-VKLQTHIVEQEnllLKDELERLKQLHRCPDLSDFQQKMCSI----LSYNENLLKEK-------- 1003
Cdd:COG4913 524 pdpeRPRLDPDSLAGkLDFKPHPFRAW---LEAELGRRFDYVCVDSPEELRRHPRAItragQVKGNGTRHEKddrrrirs 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1004 ------------EVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLALS---------QEKVQNLE--- 1059
Cdd:COG4913 601 ryvlgfdnraklAALEAELAELEEELAE---AEERLEALEAELDALQERREALQRLAEYSwdeidvasaEREIAELEael 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1060 -------DILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAidKDWVSETATHLSGLQGQQKRLSWNKLDHLM 1132
Cdd:COG4913 678 erldassDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQA--EEELDELQDRLEAAEDLARLELRALLEERF 755
|
570 580 590
....*....|....*....|....*....|....*....
gi 672056301 1133 SEEpellcQESKRLQTVVQNTQADLTHSREKIRQLESNL 1171
Cdd:COG4913 756 AAA-----LGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
677-978 |
1.80e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.61 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 677 ADLQGQAAVLKEAHHkascrHEEEKKQLQMvfDEEKTQLQEELRLEHEQE---LKARLQQAEESFRQEREGLAqaaAWTE 753
Cdd:PRK11281 39 ADVQAQLDALNKQKL-----LEAEDKLVQQ--DLEQTLALLDKIDRQKEEteqLKQQLAQAPAKLRQAQAELE---ALKD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 754 EKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYH-------------QRELQEGryeSEKLQEENSILRNeiTT 820
Cdd:PRK11281 109 DNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNsqlvslqtqperaQAALYAN---SQRLQQIRNLLKG--GK 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 821 LNEEDSISNLKlEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELsqknsQNkeelkTLNQ 900
Cdd:PRK11281 184 VGGKALRPSQR-VLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLL-----QE-----AINS 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 901 -RLAEmlcqkedpgtctSEKWEQENESLKEEldrYKVQTSTLV---SSLEAELSEVKLQ----THIVEQENLLLKDELER 972
Cdd:PRK11281 253 kRLTL------------SEKTVQEAQSQDEA---ARIQANPLVaqeLEINLQLSQRLLKatekLNTLTQQNLRVKNWLDR 317
|
....*.
gi 672056301 973 LKQLHR 978
Cdd:PRK11281 318 LTQSER 323
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
651-887 |
1.85e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 651 QVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQmVFDEEKTQLQEELRleheqELKAR 730
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-ALEQELAALEAELA-----ELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 731 LQQAEESFRQEREGLAQ--AAAWTEEKARSLTRDLEQSHQEQLLSLMekhalekeELRKELSEYHQRELQEGRYESEKLQ 808
Cdd:COG4942 92 IAELRAELEAQKEELAEllRALYRLGRQPPLALLLSPEDFLDAVRRL--------QYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672056301 809 EENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQK 887
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
662-1093 |
2.72e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 52.39 E-value: 2.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 662 MRTLEKQISELQSEIADLQGQAAVLKEAH-HKASC---RHEEEKKQLQMVFDEEKTQLQEELrleheqelKARLQQAEES 737
Cdd:COG5022 812 YRSYLACIIKLQKTIKREKKLRETEEVEFsLKAEVliqKFGRSLKAKKRFSLLKKETIYLQS--------AQRVELAERQ 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 738 FRQ------EREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRK-ELSEYHQRELQEGRyESEKLQEE 810
Cdd:COG5022 884 LQElkidvkSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNiDLEEGPSIEYVKLP-ELNKLHEV 962
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 811 NSILRNEITTLNEEDSISNLKLEELNGSQEEL---WQKIETIEQEKASIQKMVEKLKK---QVSDLKLKNQQLDSENKEL 884
Cdd:COG5022 963 ESKLKETSEEYEDLLKKSTILVREGNKANSELknfKKELAELSKQYGALQESTKQLKElpvEVAELQSASKIISSESTEL 1042
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 885 SQKNSQNK------EELKTLNQRLAEMLCQKEDPGTCTSEKWEQE---------NESLKEELDRYKVQTSTLVSSLEAEL 949
Cdd:COG5022 1043 SILKPLQKlkglllLENNQLQARYKALKLRRENSLLDDKQLYQLEstenllktiNVKDLEVTNRNLVKPANVLQFIVAQM 1122
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 950 SEVKLQTHIVE---QENLLLKDELERLKQLHRCPDLSDFQQKMCSILSYN-ENLLKEKEVLSEELKSCADKLAESSLLEH 1025
Cdd:COG5022 1123 IKLNLLQEISKflsQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPpFAALSEKRLYQSALYDEKSKLSSSEVNDL 1202
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1026 RIATIKEEREAWEEQSQDLKSQLALSQEKV-----------QNLEDILKN--------VNLQMAQIESDLQVTRQEKEAL 1086
Cdd:COG5022 1203 KNELIALFSKIFSGWPRGDKLKKLISEGWVpteystslkgfNNLNKKFDTpasmsnekLLSLLNSIDNLLSSYKLEEEVL 1282
|
....*..
gi 672056301 1087 KQEVMSL 1093
Cdd:COG5022 1283 PATINSL 1289
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
528-902 |
3.40e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 51.88 E-value: 3.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 528 LQEERLAQMRNEYEQQcrllqdqvDELQSELE-EYQAQGRVLRLpCQNALseeldGHGDGIEQDQEpgsgECNPLNMSI- 605
Cdd:COG3096 303 EEQYRLVEMARELEEL--------SARESDLEqDYQAASDHLNL-VQTAL-----RQQEKIERYQE----DLEELTERLe 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 606 EAELVIEQLKEQHHRdlCHLRLEL-EDKVRHYEKQLDHTRVACEKEQVAMKQkYEQGMRTLEKqiSELQSEIADLQGQAA 684
Cdd:COG3096 365 EQEEVVEEAAEQLAE--AEARLEAaEEEVDSLKSQLADYQQALDVQQTRAIQ-YQQAVQALEK--ARALCGLPDLTPENA 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 685 VLKEAHHKAscrheEEKKQLQMVFD-EEKTQLQEELRLEHEQELKARL------------QQAEESFRQEREGLAQAA-- 749
Cdd:COG3096 440 EDYLAAFRA-----KEQQATEEVLElEQKLSVADAARRQFEKAYELVCkiageversqawQTARELLRRYRSQQALAQrl 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 750 -------------AWTEEKARSLTRDLEQSHQEQLLS--LMEKHALEKEELRKELSEYhQRELQEGRYESEKLQEENSIL 814
Cdd:COG3096 515 qqlraqlaeleqrLRQQQNAERLLEEFCQRIGQQLDAaeELEELLAELEAQLEELEEQ-AAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 815 RNEITTLNEEDSISNLKLEELngsQEELWQKIETIEQEKASIQKMVEKLKKQV---SDLKLKNQQLDSENKELSQKNSQN 891
Cdd:COG3096 594 IKELAARAPAWLAAQDALERL---REQSGEALADSQEVTAAMQQLLEREREATverDELAARKQALESQIERLSQPGGAE 670
|
410
....*....|.
gi 672056301 892 KEELKTLNQRL 902
Cdd:COG3096 671 DPRLLALAERL 681
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
690-978 |
4.08e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 51.28 E-value: 4.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 690 HHKASCRHEEEKKQLQMvfdEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQE 769
Cdd:pfam17380 280 HQKAVSERQQQEKFEKM---EQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 770 QLLSLMEKhaLEKEELRKELSEY---------HQRELQEGRYESE-----KLQEEN---SILRNEITTLNEEDSISNLKL 832
Cdd:pfam17380 357 ERKRELER--IRQEEIAMEISRMrelerlqmeRQQKNERVRQELEaarkvKILEEErqrKIQQQKVEMEQIRAEQEEARQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 833 EELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDP 912
Cdd:pfam17380 435 REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERK 514
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672056301 913 GTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLkDELERLKQLHR 978
Cdd:pfam17380 515 RKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRL-EAMEREREMMR 579
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
414-902 |
4.44e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.50 E-value: 4.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 414 RNEYNLRKLDEEykerIAALKNELRQEREQI-------------LQQVGKQRVELEQEIEKAkteenyiRDRLALSlken 480
Cdd:PRK04863 276 RHANERRVHLEE----ALELRRELYTSRRQLaaeqyrlvemareLAELNEAESDLEQDYQAA-------SDHLNLV---- 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 481 nrleNELLENAEKLAEYENLTSKLQRSLEnvlaekfgdldpsSAEFFLQEerLAQMRNEYEQQCRLLQDQVDELQSELEE 560
Cdd:PRK04863 341 ----QTALRQQEKIERYQADLEELEERLE-------------EQNEVVEE--ADEQQEENEARAEAAEEEVDELKSQLAD 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 561 YQ-----AQGRVLRLpcQNALseeldghgdgieQDQEPGSGECNPLNMSIE-AELVIEQLKEQHHrdlchlrlELEDKVR 634
Cdd:PRK04863 402 YQqaldvQQTRAIQY--QQAV------------QALERAKQLCGLPDLTADnAEDWLEEFQAKEQ--------EATEELL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 635 HYEKQLDHTRVAcekeqvamKQKYEQGMRTLEKQISELQSEIADLQGQAAVLkeahhkascRHEEEKKQLQMVfdeektq 714
Cdd:PRK04863 460 SLEQKLSVAQAA--------HSQFEQAYQLVRKIAGEVSRSEAWDVARELLR---------RLREQRHLAEQL------- 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 715 lqeelrleheQELKARLQQAEESFRQEREglaqaaawteekARSLTRDLEQSHQEQLL--SLMEKHALEKEELRKELSEY 792
Cdd:PRK04863 516 ----------QQLRMRLSELEQRLRQQQR------------AERLLAEFCKRLGKNLDdeDELEQLQEELEARLESLSES 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 793 hQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELngsQEELWQKIETIEQEKASIQKMVEKLKK---QVSD 869
Cdd:PRK04863 574 -VSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARL---REQSGEEFEDSQDVTEYMQQLLEREREltvERDE 649
|
490 500 510
....*....|....*....|....*....|...
gi 672056301 870 LKLKNQQLDSENKELSQKNSQNKEELKTLNQRL 902
Cdd:PRK04863 650 LAARKQALDEEIERLSQPGGSEDPRLNALAERF 682
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
805-1074 |
4.48e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 51.08 E-value: 4.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 805 EKLQEENSIlrnEITTLNEEdsISNLKLEELNGSQEELWQKIETIEQ-------EKASIQKM-VEKLKKQVSDLKLKNQQ 876
Cdd:PRK05771 23 EALHELGVV---HIEDLKEE--LSNERLRKLRSLLTKLSEALDKLRSylpklnpLREEKKKVsVKSLEELIKDVEEELEK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 877 LDSENKELSQKNSQNKEELKTLNQRLAEMLCQK---EDP-------------GTCTSEKWE---QENESLKEELDRYKVQ 937
Cdd:PRK05771 98 IEKEIKELEEEISELENEIKELEQEIERLEPWGnfdLDLslllgfkyvsvfvGTVPEDKLEelkLESDVENVEYISTDKG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 938 TSTLVSSLEAELSEvklqthivEQENLLLKDELERLKqlhrCPDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKL 1017
Cdd:PRK05771 178 YVYVVVVVLKELSD--------EVEEELKKLGFERLE----LEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKY 245
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 1018 AEssllehRIATIKEEREAwEEQSQDLKSQLALSQ-----------EKVQNLEDILKNVNLQMAQIES 1074
Cdd:PRK05771 246 LE------ELLALYEYLEI-ELERAEALSKFLKTDktfaiegwvpeDRVKKLKELIDKATGGSAYVEF 306
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
377-1085 |
7.52e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.91 E-value: 7.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 377 DQVVREKEKLRSDLDKAEKLKSLMASEV--DDHHAAIERRNEYNLRK-------LDEEYKERIAALKNELRQEREQILQQ 447
Cdd:PTZ00121 1039 DDVLKEKDIIDEDIDGNHEGKAEAKAHVgqDEGLKPSYKDFDFDAKEdnradeaTEEAFGKAEEAKKTETGKAEEARKAE 1118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 448 VGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLEnvlAEKFGDLDPSSAEFF 527
Cdd:PTZ00121 1119 EAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEA---ARKAEEVRKAEELRK 1195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 528 LQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVlRLPCQNALSEELDGHGDGIEQDQEPGSGECNPLNMSIEA 607
Cdd:PTZ00121 1196 AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEA-KKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKA 1274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 608 ElviEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVA--MKQKYEQGMRTLEKqiSELQSEIADLQGQAAV 685
Cdd:PTZ00121 1275 E---EARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAdeAKKKAEEAKKKADA--AKKKAEEAKKAAEAAK 1349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 686 LKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKA-RLQQAEESFRQEREGLAQAAAwTEEKARSLTRDLE 764
Cdd:PTZ00121 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAdEAKKKAEEDKKKADELKKAAA-AKKKADEAKKKAE 1428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 765 QSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITtlneedsisnlKLEELNGSQEELWQ 844
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK-----------KADEAKKKAEEAKK 1497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 845 KIETIeQEKASIQKMVEKLKKqVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQEN 924
Cdd:PTZ00121 1498 KADEA-KKAAEAKKKADEAKK-AEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEED 1575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 925 ESLK----EELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRcpDLSDFQQKMCSILSYNENLL 1000
Cdd:PTZ00121 1576 KNMAlrkaEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKK--KVEQLKKKEAEEKKKAEELK 1653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1001 KEKE---VLSEELKSCADKlaESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQ 1077
Cdd:PTZ00121 1654 KAEEenkIKAAEEAKKAEE--DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIK 1731
|
....*...
gi 672056301 1078 VTRQEKEA 1085
Cdd:PTZ00121 1732 AEEAKKEA 1739
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
782-1375 |
8.35e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.50 E-value: 8.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 782 KEELRKELSEY-HQ-RELQEGRYESEKLQEENSI-LRNEITTLN--------EEDSISNLKLEElNGSQEELwqkietie 850
Cdd:pfam15921 73 KEHIERVLEEYsHQvKDLQRRLNESNELHEKQKFyLRQSVIDLQtklqemqmERDAMADIRRRE-SQSQEDL-------- 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 851 qeKASIQKMVEKLKKQVSdlkLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGtctSEKWEQEN------ 924
Cdd:pfam15921 144 --RNQLQNTVHELEAAKC---LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASG---KKIYEHDSmstmhf 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 925 ESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQEN-----LLLKDELERLKQL--HRCPDLSDFQQKMCSILSYNE 997
Cdd:pfam15921 216 RSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESqnkieLLLQQHQDRIEQLisEHEVEITGLTEKASSARSQAN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 998 NLLKEKEVLSEELKScadklaESSLLEHRIATIkeereawEEQSQDLKSQLalsQEKVQNLEDILKNVNLQMAQIESDLQ 1077
Cdd:pfam15921 296 SIQSQLEIIQEQARN------QNSMYMRQLSDL-------ESTVSQLRSEL---REAKRMYEDKIEELEKQLVLANSELT 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1078 VTRQEKEALKQEVMSLHLQLQNAIDKdwVSETATHLSGLQGQQKRLsWNK-------LDHLMSEEPELlCQESKRLQTVV 1150
Cdd:pfam15921 360 EARTERDQFSQESGNLDDQLQKLLAD--LHKREKELSLEKEQNKRL-WDRdtgnsitIDHLRRELDDR-NMEVQRLEALL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1151 QNTQADLTHSREkiRQLESnlLPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKER---SPTSRKVSQMS-SLERELET 1226
Cdd:pfam15921 436 KAMKSECQGQME--RQMAA--IQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKmtlESSERTVSDLTaSLQEKERA 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1227 IHLENEGLKKKQVRLDEKLMEMQPLRSAGTHSPSSHWDLQLLQQQACpmvprEQFLQLQQQLLQAEKRSQHLQEEldNRT 1306
Cdd:pfam15921 512 IEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMA-----EKDKVIEILRQQIENMTQLVGQH--GRT 584
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672056301 1307 SEPNTVQGSQehLVNLMEERMIEVeQKLKLVKRLLQEKVNQLkeqlcknsktDAMVKDLYVENAQLLKA 1375
Cdd:pfam15921 585 AGAMQVEKAQ--LEKEINDRRLEL-QEFKILKDKKDAKIREL----------EARVSDLELEKVKLVNA 640
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
691-1397 |
9.73e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.36 E-value: 9.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 691 HKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQ 770
Cdd:pfam02463 187 ELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEK 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 771 LLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIE 850
Cdd:pfam02463 267 LAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKE 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 851 QEKASIQKmvEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENESLKEE 930
Cdd:pfam02463 347 LEIKREAE--EEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEE 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 931 LDRYKVQTSTLVSSLE-AELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMCSILSYNENLLKEKEV-LSE 1008
Cdd:pfam02463 425 KKEELEILEEEEESIElKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQkESK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1009 ELKSCADKLAESSLLEHRIATIKEERE----------------AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQI 1072
Cdd:pfam02463 505 ARSGLKVLLALIKDGVGGRIISAHGRLgdlgvavenykvaistAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1073 ESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSWNKLDHLM-------SEEPELLCQESKR 1145
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKesglrkgVSLEEGLAEKSEV 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1146 LQTVVQNTQADLTHSREKIRQLESNLLPTKHQKQLNQSCTVKPIEQEKLALKRECE-------QSRKERSPTSRKVSQMS 1218
Cdd:pfam02463 665 KASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEelladrvQEAQDKINEELKLLKQK 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1219 SLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSAGThspsshwDLQLLQQQACPMVPREQFLQLQQQLLQAEKRSQHL 1298
Cdd:pfam02463 745 IDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREK-------TEKLKVEEEKEEKLKAQEEELRALEEELKEEAELL 817
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1299 QEELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKLKLVKRLLQEKVNQLKEQLCKNSKTDAMVKDLYVENAQLLKALEM 1378
Cdd:pfam02463 818 EEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKE 897
|
730
....*....|....*....
gi 672056301 1379 TEQRQKTAEKKNFLLEEKI 1397
Cdd:pfam02463 898 EKKELEEESQKLNLLEEKE 916
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
332-976 |
1.19e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.97 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 332 SLDGNINLTELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMAS--------- 402
Cdd:TIGR00618 191 SLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLlkqlrarie 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 403 EVDDHHAAIERRNE-YNLRKLDEEYKERIAALKnELRQEREQILQQVGKQRVELEQEIE------KAKTEENYIRDRLAL 475
Cdd:TIGR00618 271 ELRAQEAVLEETQErINRARKAAPLAAHIKAVT-QIEQQAQRIHTELQSKMRSRAKLLMkraahvKQQSSIEEQRRLLQT 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 476 SLKENNRLENELLENAEKLAEYENLTSKLQR------------SLENVLAEKFGDLD--PSSAEFFLQEERLAQMRNEYE 541
Cdd:TIGR00618 350 LHSQEIHIRDAHEVATSIREISCQQHTLTQHihtlqqqkttltQKLQSLCKELDILQreQATIDTRTSAFRDLQGQLAHA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 542 QQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDghgdgiEQDQEPGSGEcNPLNMSIEAELVIEQLKEQHHRD 621
Cdd:TIGR00618 430 KKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLK------EREQQLQTKE-QIHLQETRKKAVVLARLLELQEE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 622 LChlrlELEDKVRHYEKQLD-------HTRVACEKEQVAmkQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKAS 694
Cdd:TIGR00618 503 PC----PLCGSCIHPNPARQdidnpgpLTRRMQRGEQTY--AQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 695 CRHEEEKKQLQMVfdeekTQLQEELRLEHEQELKARLQQAEESFRQEREG-----LAQAAAWTEEKARSLTRDLEQSHQE 769
Cdd:TIGR00618 577 QCDNRSKEDIPNL-----QNITVRLQDLTEKLSEAEDMLACEQHALLRKLqpeqdLQDVRLHLQQCSQELALKLTALHAL 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 770 QLLSLMEK---HALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKI 846
Cdd:TIGR00618 652 QLTLTQERvreHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLG 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 847 ETIEQEKASIQKMVEKLKKQvSDLKLKNQQLDSENKELSQK-NSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENE 925
Cdd:TIGR00618 732 SDLAAREDALNQSLKELMHQ-ARTVLKARTEAHFNNNEEVTaALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQ 810
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 672056301 926 SLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQL 976
Cdd:TIGR00618 811 EIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQL 861
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
466-1112 |
1.24e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.22 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 466 ENYIRDRLALSLKENNRLENELLENAEKlaEYENLTSKLQRSlenvlaeKFGDLDPSSAEFFLQEERlAQMRNEYEQQCR 545
Cdd:pfam12128 224 EHWIRDIQAIAGIMKIRPEFTKLQQEFN--TLESAELRLSHL-------HFGYKSDETLIASRQEER-QETSAELNQLLR 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 546 LLQDQVDELQSELEE---------YQAQGRVLRLPCQNALSEELDGHGDGIEQDQEPG-SGECNPLNMSIEAEL-VIEQL 614
Cdd:pfam12128 294 TLDDQWKEKRDELNGelsaadaavAKDRSELEALEDQHGAFLDADIETAAADQEQLPSwQSELENLEERLKALTgKHQDV 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 615 KEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKqkyeqgmrtlekqiselqseiADLQGQAAVLKEAHHKAS 694
Cdd:pfam12128 374 TAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAE---------------------DDLQALESELREQLEAGK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 695 CRHEEEKKQLQMVFDEEKTQL-------QEELRLEHEQELKARLQQAEESFRQEREGLAQAaawtEEKARSLtRDLEQSH 767
Cdd:pfam12128 433 LEFNEEEYRLKSRLGELKLRLnqatatpELLLQLENFDERIERAREEQEAANAEVERLQSE----LRQARKR-RDQASEA 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 768 QEQLLSLMEKHALEKEELRKELS-------EYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSIS--------NLKL 832
Cdd:pfam12128 508 LRQASRRLEERQSALDELELQLFpqagtllHFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGgelnlygvKLDL 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 833 EELN-----GSQEELWQKIETIEQekaSIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlc 907
Cdd:pfam12128 588 KRIDvpewaASEEELRERLDKAEE---ALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEK-- 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 908 qkedpgtctsekwEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQ 987
Cdd:pfam12128 663 -------------QSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDA 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 988 KMCSIlsyNENLLKEKEVLSEELKSC------------------ADKLAESSLLEHRIATIKEER-----------EAWE 1038
Cdd:pfam12128 730 QLALL---KAAIAARRSGAKAELKALetwykrdlaslgvdpdviAKLKREIRTLERKIERIAVRRqevlryfdwyqETWL 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1039 EQSQDLKSQLALSQEKVQNLEDILK----NVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQ--NAIDKDWVSETATH 1112
Cdd:pfam12128 807 QRRPRLATQLSNIERAISELQQQLArliaDTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSklATLKEDANSEQAQG 886
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1023-1249 |
1.31e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1023 LEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAID 1102
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1103 KDWVSETATHLSGLqgqqkrlswnkldhLMSEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLEsnllpTKHQKQLNQ 1182
Cdd:COG4942 112 ALYRLGRQPPLALL--------------LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA-----ALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672056301 1183 SCTVKPIEQEKLALKRECEQSRKERSptsrkvSQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQ 1249
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQ------KLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
307-505 |
1.33e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 307 VERILDTWQEEGIE-NSQEILKALDFsLDGNINLTELTL-ALENELLVTKNgihQAALASFKAEIRHLLERVDQVVREKE 384
Cdd:COG3206 154 ANALAEAYLEQNLElRREEARKALEF-LEEQLPELRKELeEAEAALEEFRQ---KNGLVDLSEEAKLLLQQLSELESQLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 385 KLRSDLDKAE----------KLKSLMASEVDDHHAAIERRNEYN-----LRKLDEEYKE---RIAALKNELRQEREQILQ 446
Cdd:COG3206 230 EARAELAEAEarlaalraqlGSGPDALPELLQSPVIQQLRAQLAeleaeLAELSARYTPnhpDVIALRAQIAALRAQLQQ 309
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 672056301 447 QVGKQRVELEQEIEKAKTEENYIRDRLAlslkennRLENELLENAEKLAEYENLTSKLQ 505
Cdd:COG3206 310 EAQRILASLEAELEALQAREASLQAQLA-------QLEARLAELPELEAELRRLEREVE 361
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
421-1253 |
1.33e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.97 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 421 KLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYirdrlalslkeNNRLENELLENAEKLAEYENL 500
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYY-----------QLKEKLELEEEYLLYLDYLKL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 501 TSKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQ--VDELQSELEEYQAQGRVLRLPCQNALSE 578
Cdd:pfam02463 235 NEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQeeELKLLAKEEEELKSELLKLERRKVDDEE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 579 ELDGHgdgieqdqepgsgECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKY 658
Cdd:pfam02463 315 KLKES-------------EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 659 EQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESF 738
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 739 RQEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELseyhqRELQEGRYESEKLQEENSILRNEI 818
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVL-----LALIKDGVGGRIISAHGRLGDLGV 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 819 TTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASiqKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTL 898
Cdd:pfam02463 537 AVENYKVAISTAVIVEVSATADEVEERQKLVRALTEL--PLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLE 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 899 NQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTS---TLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQ 975
Cdd:pfam02463 615 ADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEeglAEKSEVKASLSELTKELLEIQELQEKAESELAKEEI 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 976 LHRCPDLSDFQQKMCSILsynENLLKEKEVLSEELKSCADKLA--ESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQE 1053
Cdd:pfam02463 695 LRRQLEIKKKEQREKEEL---KKLKLEAEELLADRVQEAQDKIneELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSL 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1054 KVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKdwvsetathLSGLQGQQKRLSWNKLDHLMS 1133
Cdd:pfam02463 772 KEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQ---------LLIEQEEKIKEEELEELALEL 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1134 EEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRK 1213
Cdd:pfam02463 843 KEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEER 922
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 672056301 1214 VSQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRS 1253
Cdd:pfam02463 923 IKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERN 962
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
381-872 |
1.60e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 381 REKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYnlrkldEEYKERIAALKNELRQEREQILQQvgKQRVELEQEIE 460
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEEL------EEELEELEAELEELREELEKLEKL--LQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 461 KAKTEENYIRDRLalslkenNRLENELLENAEKLAEYENLTSKLQRsLENVLAEKFGDLDPSSAEfflQEERLAQMRNEY 540
Cdd:COG4717 136 ALEAELAELPERL-------EELEERLEELRELEEELEELEAELAE-LQEELEELLEQLSLATEE---ELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 541 EQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGD-------GIEQDQEPGSGECNPLNMSIEAELVIEQ 613
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARlllliaaALLALLGLGGSLLSLILTIAGVLFLVLG 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 614 LkeqhhrdLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAmKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKA 693
Cdd:COG4717 285 L-------LALLFLLLAREKASLGKEAEELQALPALEELE-EEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 694 ScrhEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEEsfRQEreglaqaaawTEEKARSLTRDLEQSHQEQLLS 773
Cdd:COG4717 357 E---ELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEE--YQE----------LKEELEELEEQLEELLGELEEL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 774 LmekHALEKEELRKELSEYhQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEelngsQEELWQKIETIEQEK 853
Cdd:COG4717 422 L---EALDEEELEEELEEL-EEELEELEEELEELREELAELEAELEQLEEDGELAELLQE-----LEELKAELRELAEEW 492
|
490 500
....*....|....*....|..
gi 672056301 854 ASIQ---KMVEKLKKQVSDLKL 872
Cdd:COG4717 493 AALKlalELLEEAREEYREERL 514
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
698-1237 |
1.62e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.33 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 698 EEEKKQLQ-MVFDEEKTQLqeelRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQ--EQLLSL 774
Cdd:pfam05483 116 EAQRKAIQeLQFENEKVSL----KLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQvyMDLNNN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 775 MEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEIttlNEEDSISNLKLEELNGSQEELWQKIETIEQEKA 854
Cdd:pfam05483 192 IEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEI---NDKEKQVSLLLIQITEKENKMKDLTFLLEESRD 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 855 SIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTlnqrlAEMLCQKEDPGTCTSEKWEQENESLKEELDRY 934
Cdd:pfam05483 269 KANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMST-----QKALEEDLQIATKTICQLTEEKEAQMEELNKA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 935 KVQTSTLVSSLEAELSEVKLqthiveqenlLLKDELERLKQLHRCPDLSDFQ-QKMCSILSYNENLLKEKEVLSEELKSC 1013
Cdd:pfam05483 344 KAAHSFVVTEFEATTCSLEE----------LLRTEQQRLEKNEDQLKIITMElQKKSSELEEMTKFKNNKEVELEELKKI 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1014 adkLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQ--VTRQEKEALKQEVM 1091
Cdd:pfam05483 414 ---LAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEdlKTELEKEKLKNIEL 490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1092 SLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSWNKldhlmsEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNL 1171
Cdd:pfam05483 491 TAHCDKLLLENKELTQEASDMTLELKKHQEDIINCK------KQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEV 564
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672056301 1172 ---LPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKersptsrkvsQMSSLERELETIHLENEGLKKK 1237
Cdd:pfam05483 565 kckLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK----------QIENKNKNIEELHQENKALKKK 623
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
696-971 |
2.13e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 48.98 E-value: 2.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 696 RHEEEKKQLQmvfdeeKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLT----RDLEQS---HQ 768
Cdd:pfam07111 77 RLEEEVRLLR------ETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEegsqRELEEIqrlHQ 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 769 EQLLSLMEKH-------ALEKEELRKELSEYHQRELQEGRYESEKlQEENSILRNEITTLNEEDSISNLKLEELN---GS 838
Cdd:pfam07111 151 EQLSSLTQAHeealsslTSKAEGLEKSLNSLETKRAGEAKQLAEA-QKEAELLRKQLSKTQEELEAQVTLVESLRkyvGE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 839 QEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlcQKEDPGTCTS- 917
Cdd:pfam07111 230 QVPPEVHSQTWELERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELTRKIQPSDSL--EPEFPKKCRSl 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 672056301 918 -EKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELE 971
Cdd:pfam07111 308 lNRWREKVFALMVQLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQAILQRALQ 362
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
611-1245 |
5.43e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 5.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 611 IEQLKEQHHRdLCHLRLELEDKVRHYEKQLdhtrvaceKEQVAMKQKYEQGMRTLEKQISELqseIADLQGQAAVLKEAh 690
Cdd:pfam12128 250 FNTLESAELR-LSHLHFGYKSDETLIASRQ--------EERQETSAELNQLLRTLDDQWKEK---RDELNGELSAADAA- 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 691 hKASCRHEEEkkqlqmVFDEEKTQLQEElrlehEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQ 770
Cdd:pfam12128 317 -VAKDRSELE------ALEDQHGAFLDA-----DIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKI 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 771 LLSLMEKHALEKEELRKeLSEYHQRELQEGRYESEKLQEE-NSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETI 849
Cdd:pfam12128 385 KEQNNRDIAGIKDKLAK-IREARDRQLAVAEDDLQALESElREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 850 EQEKAS---IQKMVEKLK---KQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEmLCQKEDPGTCT------- 916
Cdd:pfam12128 464 LQLENFderIERAREEQEaanAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDE-LELQLFPQAGTllhflrk 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 917 -SEKWEQENESL--KEELDRYKVQTSTLVSSLEAELS--EVKLQTHIVE-QENLLLKDELE-RLKQLHRcpDLSDFQQKM 989
Cdd:pfam12128 543 eAPDWEQSIGKVisPELLHRTDLDPEVWDGSVGGELNlyGVKLDLKRIDvPEWAASEEELReRLDKAEE--ALQSAREKQ 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 990 CSILSYNENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSqdLKSQLALSQEKVQNLEDILKNVNLQ- 1068
Cdd:pfam12128 621 AAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKA--LAERKDSANERLNSLEAQLKQLDKKh 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1069 ---MAQIESDLQVTRQEKEALKQEVMSLH----LQLQNAIDKDWVSETAtHLSGLQGQQKRlswnKLDHLMSEEPEL--L 1139
Cdd:pfam12128 699 qawLEEQKEQKREARTEKQAYWQVVEGALdaqlALLKAAIAARRSGAKA-ELKALETWYKR----DLASLGVDPDVIakL 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1140 CQESKRLQTVVQNTQADlthsREKIRQLESNLLPTKHQKQLNQSCTVKPIEQEKLALKRECEQsrkersptsrkvsQMSS 1219
Cdd:pfam12128 774 KREIRTLERKIERIAVR----RQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLAR-------------LIAD 836
|
650 660
....*....|....*....|....*.
gi 672056301 1220 LERELETIHLENEGLKKKQVRLDEKL 1245
Cdd:pfam12128 837 TKLRRAKLEMERKASEKQQVRLSENL 862
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
528-777 |
9.15e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.93 E-value: 9.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 528 LQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQ-NALSEELDghgdgieqdqepgsgecnplnmSIE 606
Cdd:COG3206 168 LRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEaKLLLQQLS----------------------ELE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 607 AELVieQLKEQhhrdlchlRLELEDKVRHYEKQLDhtrvacEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQgqaAVL 686
Cdd:COG3206 226 SQLA--EARAE--------LAEAEARLAALRAQLG------SGPDALPELLQSPVIQQLRAQLAELEAELAELS---ARY 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 687 KEAHHKAScRHEEEKKQLQMVFDEEKTQLQEELRLEHeQELKARLQQAEESFRQEREGLAQAAAwTEEKARSLTRDLEqS 766
Cdd:COG3206 287 TPNHPDVI-ALRAQIAALRAQLQQEAQRILASLEAEL-EALQAREASLQAQLAQLEARLAELPE-LEAELRRLEREVE-V 362
|
250
....*....|.
gi 672056301 767 HQEQLLSLMEK 777
Cdd:COG3206 363 ARELYESLLQR 373
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
803-1403 |
1.00e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.82 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 803 ESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENK 882
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKS 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 883 ELSQKNSQnKEELKTLNQRLAEMLCQKEDPgtctsekwEQENESLKEELDRYKVQTSTLVSSLEAELSE-VKLQTHIVEQ 961
Cdd:PRK01156 240 ALNELSSL-EDMKNRYESEIKTAESDLSME--------LEKNNYYKELEERHMKIINDPVYKNRNYINDyFKYKNDIENK 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 962 ENLL--LKDELERLKQLHRcpDLSDFQQkmcsilSYNENLLKEKEVlsEELKSCADKLAESSL--------LEHRIATIK 1031
Cdd:PRK01156 311 KQILsnIDAEINKYHAIIK--KLSVLQK------DYNDYIKKKSRY--DDLNNQILELEGYEMdynsylksIESLKKKIE 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1032 EEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETAT 1111
Cdd:PRK01156 381 EYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGT 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1112 HLSGlqgqqkrlswNKLDHLMSEEPEllcqESKRLQTVVQNTQADLTHSREKIRQLESnllptkhqkqlnqsctvkpieq 1191
Cdd:PRK01156 461 TLGE----------EKSNHIINHYNE----KKSRLEEKIREIEIEVKDIDEKIVDLKK---------------------- 504
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1192 eklaLKRECEQSRKERSPTSRKvsQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSAGTHSPSSHWDLQLLQQQ 1271
Cdd:PRK01156 505 ----RKEYLESEEINKSINEYN--KIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVIS 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1272 ACPM-VPREQFLQLQQQLLQAEKRSQHLQEELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKlKLVKRLLQEKVNQLKE 1350
Cdd:PRK01156 579 LIDIeTNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQEN-KILIEKLRGKIDNYKK 657
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 672056301 1351 QLcknSKTDAMVKDLYVENAQLLKALEMTEQRQKTAEKKNFLLEEKIASLSTI 1403
Cdd:PRK01156 658 QI---AEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEIL 707
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
529-975 |
1.37e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 529 QEERLAQMRNEYEQqCRLLQDQVDELQSELEEYQAQGRVLRLPcQNALSEELDGHGDGIEQDQepgsgecnplnmsIEAE 608
Cdd:COG4717 76 LEEELKEAEEKEEE-YAELQEELEELEEELEELEAELEELREE-LEKLEKLLQLLPLYQELEA-------------LEAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 609 LVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKE 688
Cdd:COG4717 141 LAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 689 AHHKAscrheeekkqlqmvfDEEKTQLQEELRLEHEQElkaRLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQ 768
Cdd:COG4717 221 ELEEL---------------EEELEQLENELEAAALEE---RLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 769 EQLLSLMEKHAlekeeLRKELSEYHQRELQEGRYESEKLQEENsiLRNEITTLNEEDSISNLKLEELNGSQEELWQKIET 848
Cdd:COG4717 283 LGLLALLFLLL-----AREKASLGKEAEELQALPALEELEEEE--LEELLAALGLPPDLSPEELLELLDRIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 849 IEQEKASIQkmVEKLKKQVSDLkLKNQQLDSENK-----ELSQKNSQNKEELKTLNQRLAEMLCQ-KEDPGTCTSEKWEQ 922
Cdd:COG4717 356 AEELEEELQ--LEELEQEIAAL-LAEAGVEDEEElraalEQAEEYQELKEELEELEEQLEELLGElEELLEALDEEELEE 432
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 672056301 923 ENESLKEELDRYKVQtstlVSSLEAELSEVKLQTHIVEQENLL--LKDELERLKQ 975
Cdd:COG4717 433 ELEELEEELEELEEE----LEELREELAELEAELEQLEEDGELaeLLQELEELKA 483
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
359-560 |
1.64e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLdeeyKERIAALKNELR 438
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA-ELAEL----EKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 439 QEREQILQQVGKQ-----------------------RVELEQEIEKAKTEEnyiRDRLALSLKENNRLENELLENAEKLA 495
Cdd:COG4942 101 AQKEELAELLRALyrlgrqpplalllspedfldavrRLQYLKYLAPARREQ---AEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672056301 496 EYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEE 560
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE----LEALIARLEAEAAA 238
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
697-1098 |
1.98e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 45.89 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 697 HEEEKKQLQMVFDEEKTQLQEELrlEHEQELKARLQQaeesfRQEREGLAQAAAWTE-EKARSLTRDLEQSHQ---EQLL 772
Cdd:pfam05557 25 HKRARIELEKKASALKRQLDRES--DRNQELQKRIRL-----LEKREAEAEEALREQaELNRLKKKYLEALNKklnEKES 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 773 SLMEKHALeKEELRKELSEYHQR------ELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQE---ELW 843
Cdd:pfam05557 98 QLADAREV-ISCLKNELSELRRQiqraelELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQrikELE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 844 QKIETIEQEKASIQKMVEKLkKQVSDLKLKNQQLDSENKELSQKNSQN---KEELKTLNQRLAEMLCQKEDPGTCtsekw 920
Cdd:pfam05557 177 FEIQSQEQDSEIVKNSKSEL-ARIPELEKELERLREHNKHLNENIENKlllKEEVEDLKRKLEREEKYREEAATL----- 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 921 EQENESLKEELDRY-KVQTSTLVSSLEAELSEVKLQThiVEQENLLLKDEL----ERLKQLHRcpDLSDFQQKmcsILSY 995
Cdd:pfam05557 251 ELEKEKLEQELQSWvKLAQDTGLNLRSPEDLSRRIEQ--LQQREIVLKEENssltSSARQLEK--ARRELEQE---LAQY 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 996 NENLLKEKEVLsEELKSCADKlaesslLEHRIATIKEEREAWEEQSQDLKSQLALSQ------EKVQNLEDILKNVNLQM 1069
Cdd:pfam05557 324 LKKIEDLNKKL-KRHKALVRR------LQRRVLLLTKERDGYRAILESYDKELTMSNyspqllERIEEAEDMTQKMQAHN 396
|
410 420
....*....|....*....|....*....
gi 672056301 1070 AQIESDLQVTRQEKEALKQEVMSLHLQLQ 1098
Cdd:pfam05557 397 EEMEAQLSVAEEELGGYKQQAQTLERELQ 425
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
781-971 |
2.36e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.28 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 781 EKEELRKELSEYhQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMV 860
Cdd:COG4372 39 ELDKLQEELEQL-REELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 861 EKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTST 940
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAE 197
|
170 180 190
....*....|....*....|....*....|.
gi 672056301 941 LVSSLEAELSEVKLQTHIVEQENLLLKDELE 971
Cdd:COG4372 198 KEEELAEAEKLIESLPRELAEELLEAKDSLE 228
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
701-880 |
2.51e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 45.01 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 701 KKQLQMVFDEEKTQLQE---ELRLEHEQELKARLQQAEESFRQEREGLAQaaawTEEKARSLTRDLEQSHQeqllSLMEK 777
Cdd:smart00787 116 DKQFQLVKTFARLEAKKmwyEWRMKLLEGLKEGLDENLEGLKEDYKLLMK----ELELLNSIKPKLRDRKD----ALEEE 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 778 HALEKEeLRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQEKASIQ 857
Cdd:smart00787 188 LRQLKQ-LEDELEDCDPTELDRAKEKLKKLLQEIMIKVKKLEELEEE-------LQELESKIEDLTNKKSELNTEIAEAE 259
|
170 180
....*....|....*....|....*..
gi 672056301 858 KMVEKLK----KQVSDLKLKNQQLDSE 880
Cdd:smart00787 260 KKLEQCRgftfKEIEKLKEQLKLLQSL 286
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
805-1057 |
2.53e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 805 EKLQEENSILR-----NEITTLNEED--SISNLKLEELNGSQEELWQKIETIEQEkASIQ-----KMVEKLKKQVSDL-K 871
Cdd:PLN02939 71 ENGQLENTSLRtvmelPQKSTSSDDDhnRASMQRDEAIAAIDNEQQTNSKDGEQL-SDFQledlvGMIQNAEKNILLLnQ 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 872 LKNQQLDSENKELSQKNSQNKEeLKTLNQRLAE-----MLCQKEDPGTctsEKWEQENESLKEELDRYKVQTSTLVSSLE 946
Cdd:PLN02939 150 ARLQALEDLEKILTEKEALQGK-INILEMRLSEtdariKLAAQEKIHV---EILEEQLEKLRNELLIRGATEGLCVHSLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 947 AELSEVKLqthiveqENLLLKDELERLKQlhrcpDLSDFQQKMCSILSynenLLKEKEVLSEELKSCADKLAESSLLEHR 1026
Cdd:PLN02939 226 KELDVLKE-------ENMLLKDDIQFLKA-----ELIEVAETEERVFK----LEKERSLLDASLRELESKFIVAQEDVSK 289
|
250 260 270
....*....|....*....|....*....|.
gi 672056301 1027 IATIKEerEAWEEQSQDLKSQLALSQEKVQN 1057
Cdd:PLN02939 290 LSPLQY--DCWWEKVENLQDLLDRATNQVEK 318
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
655-905 |
2.72e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 655 KQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKAScrheeekkqlqmvfdEEKTQLQEELrleheQELKARLQQA 734
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQ---------------AELEALQAEI-----DKLQAEIAEA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 735 EESFRQEREGLAQAAAWTEEKARSLtrdleqSHQEQLL---SLMEkhALEKEELRKELSEYHQRELQEGRYESEKLQEEN 811
Cdd:COG3883 78 EAEIEERREELGERARALYRSGGSV------SYLDVLLgseSFSD--FLDRLSALSKIADADADLLEELKADKAELEAKK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 812 SILRNeittlneedsisnlKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQN 891
Cdd:COG3883 150 AELEA--------------KLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAA 215
|
250
....*....|....
gi 672056301 892 KEELKTLNQRLAEM 905
Cdd:COG3883 216 AAAAAAAAAAAAAA 229
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
404-770 |
2.91e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.50 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 404 VDDHHAAIERRNEYNLRKLDEEykeriaalknELRQEREQILQQVGKQRveleqEIEKAKTEENYIRDRLALSLKENNRL 483
Cdd:pfam17380 278 VQHQKAVSERQQQEKFEKMEQE----------RLRQEKEEKAREVERRR-----KLEEAEKARQAEMDRQAAIYAEQERM 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 484 ENELLENAEKLAEYENltsklQRSLENVLAEKFG-DLDPSSAEFFLQEERlaQMRNEYEQQ----CRLLQDQVDELQSEL 558
Cdd:pfam17380 343 AMERERELERIRQEER-----KRELERIRQEEIAmEISRMRELERLQMER--QQKNERVRQeleaARKVKILEEERQRKI 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 559 EEYQAQGRVLRLPCQNALSEELdghgdgieqdqepgsgecnplnmsieaelviEQLKEQHHRDLCHLRLELEDK------ 632
Cdd:pfam17380 416 QQQKVEMEQIRAEQEEARQREV-------------------------------RRLEEERAREMERVRLEEQERqqqver 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 633 VRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISElqseiadlqGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEK 712
Cdd:pfam17380 465 LRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEE---------RKQAMIEEERKRKLLEKEMEERQKAIYEEERR 535
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 713 TQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAaawteEKARSLTRDLEQSHQEQ 770
Cdd:pfam17380 536 REAEEERRKQQEMEERRRIQEQMRKATEERSRLEAM-----EREREMMRQIVESEKAR 588
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
717-1020 |
3.31e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 45.23 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 717 EELRLEHE-QELKARLQQAEESFRQEREGLaqaaawTEEKARSLTRDLEQSHQEQLLS--LMEKHALEKEELRKELSEYH 793
Cdd:PLN03229 430 PVRELEGEvEKLKEQILKAKESSSKPSELA------LNEMIEKLKKEIDLEYTEAVIAmgLQERLENLREEFSKANSQDQ 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 794 --QRELQEgryESEKLQEENSI----------LRNEITTLNEedsISNLK-LEELNGSQEELWQKIETIEQE---KASIQ 857
Cdd:PLN03229 504 lmHPVLME---KIEKLKDEFNKrlsrapnylsLKYKLDMLNE---FSRAKaLSEKKSKAEKLKAEINKKFKEvmdRPEIK 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 858 KMVEKLKKQVSDLKLKNQqlDSENKELSQKNSQNKEE--------LKTLNQRLAEMLCQKEDPGTCTSEKWEQEN-ESLK 928
Cdd:PLN03229 578 EKMEALKAEVASSGASSG--DELDDDLKEKVEKMKKEielelagvLKSMGLEVIGVTKKNKDTAEQTPPPNLQEKiESLN 655
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 929 EELDRyKVQTSTLVSSLEAELSEVKLQTHIVEQ-ENLLLKDELERLKQlhrcpdlsDFQQKMCSILSYNEnlLKEK-EVL 1006
Cdd:PLN03229 656 EEINK-KIERVIRSSDLKSKIELLKLEVAKASKtPDVTEKEKIEALEQ--------QIKQKIAEALNSSE--LKEKfEEL 724
|
330
....*....|....
gi 672056301 1007 SEELKSCADKLAES 1020
Cdd:PLN03229 725 EAELAAARETAAES 738
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
773-895 |
4.62e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.38 E-value: 4.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 773 SLMEKHALEKEELRKELSEYHQRELQEGRYESE-KLQEENSILRNEIttlnEEDSisNLKLEELNGSQEELWQKIETIEQ 851
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRILEEAKKEAEAIKKEALlEAKEEIHKLRNEF----EKEL--RERRNELQKLEKRLLQKEENLDR 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 672056301 852 EKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEEL 895
Cdd:PRK12704 101 KLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL 144
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
709-1086 |
5.22e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.65 E-value: 5.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 709 DEEKTQLQEEL-RLEHE-QELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRdLEQSHQEQLLSLMEKHALEKEelR 786
Cdd:PRK02224 198 EKEEKDLHERLnGLESElAELDEEIERYEEQREQARETRDEADEVLEEHEERREE-LETLEAEIEDLRETIAETERE--R 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 787 KELSEyhqrELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQ 866
Cdd:PRK02224 275 EELAE----EVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRED 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 867 VSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKED------PGTCTSEKWEQENESLKEELDRYKVQtst 940
Cdd:PRK02224 351 ADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEElrerfgDAPVDLGNAEDFLEELREERDELRER--- 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 941 lVSSLEAELSEVklQTHIVEQENLL--------------------LKDELERLKQLHRcpDLSDFQQKMCSILSYNENL- 999
Cdd:PRK02224 428 -EAELEATLRTA--RERVEEAEALLeagkcpecgqpvegsphvetIEEDRERVEELEA--ELEDLEEEVEEVEERLERAe 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1000 -LKEKEVLSEELKSCADKLAEssLLEHRIATIKEEREAWE---EQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESD 1075
Cdd:PRK02224 503 dLVEAEDRIERLEERREDLEE--LIAERRETIEEKRERAEelrERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSK 580
|
410
....*....|.
gi 672056301 1076 LQVTRQEKEAL 1086
Cdd:PRK02224 581 LAELKERIESL 591
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
927-1207 |
6.87e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.16 E-value: 6.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 927 LKEELDRYKVQTSTL--------VSSLEAELSEVKLQTHIVEQENLLLKDELERLKQlhrcpDLSDFQQKMCSILSYNEN 998
Cdd:COG1196 218 LKEELKELEAELLLLklreleaeLEELEAELEELEAELEELEAELAELEAELEELRL-----ELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 999 LLKEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQV 1078
Cdd:COG1196 293 LLAELARLEQDIARLEERRRE---LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1079 TRQEKEALKQEVMSLHLQLQNAIDKdwVSETATHLSGLQGQQKRLSwNKLDHLMSEEPELLcQESKRLQTVVQNTQADLT 1158
Cdd:COG1196 370 AEAELAEAEEELEELAEELLEALRA--AAELAAQLEELEEAEEALL-ERLERLEEELEELE-EALAELEEEEEEEEEALE 445
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 672056301 1159 HSREKIRQLESNLLptKHQKQLNQSCTVKPIEQEKLALKRECEQSRKER 1207
Cdd:COG1196 446 EAAEEEAELEEEEE--ALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
611-866 |
8.36e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 8.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 611 IEQLKEQHHRDLCHLR-LELEDKVRHYEKQ------LDHTRVACEKEQVAMKQKYEQGMRTLEK-QISELQSEIADLQGQ 682
Cdd:pfam17380 301 LRQEKEEKAREVERRRkLEEAEKARQAEMDrqaaiyAEQERMAMERERELERIRQEERKRELERiRQEEIAMEISRMREL 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 683 AAVLKEAHHK-ASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQelkARLQQAEESFRQEREglaqaaaWTEEKARSLTR 761
Cdd:pfam17380 381 ERLQMERQQKnERVRQELEAARKVKILEEERQRKIQQQKVEMEQ---IRAEQEEARQREVRR-------LEEERAREMER 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 762 ----DLEQSHQEQLLSLME------KHALEKEE-------------LRKELSEYHQRELQEGR----YESEKLQEENSIL 814
Cdd:pfam17380 451 vrleEQERQQQVERLRQQEeerkrkKLELEKEKrdrkraeeqrrkiLEKELEERKQAMIEEERkrklLEKEMEERQKAIY 530
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 815 RNEITTLNEEDSISNLKLEELNGSQEELWQ------KIETIEQEKASIQKMVEKLKKQ 866
Cdd:pfam17380 531 EEERRREAEEERRKQQEMEERRRIQEQMRKateersRLEAMEREREMMRQIVESEKAR 588
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
437-1335 |
8.66e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.88 E-value: 8.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 437 LRQEREQILQQVGKQRVELeQEIEKAKTEENYIRDRL-------ALSLKENNRLENELLENAEKLAEYENLTSKLQRSLE 509
Cdd:TIGR00606 191 LRQVRQTQGQKVQEHQMEL-KYLKQYKEKACEIRDQItskeaqlESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDN 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 510 NVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQgrvlRLPCQNALSEEldgHGDGIEQ 589
Cdd:TIGR00606 270 EIKALKSRKKQMEKDNSELELKMEKVFQGTDEQ----LNDLYHNHQRTVREKERE----LVDCQRELEKL---NKERRLL 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 590 DQEPGSGECNPLNMSIEAELVIEQLKEqhhRDLCHLRLELEDKVRHYEKQLDHTRvACEKEQVAMKQKYEQGMRTLEKQI 669
Cdd:TIGR00606 339 NQEKTELLVEQGRLQLQADRHQEHIRA---RDSLIQSLATRLELDGFERGPFSER-QIKNFHTLVIERQEDEAKTAAQLC 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 670 SELQSEIADLQGQAAVLkeahhkascrhEEEKKQLQMVFDEEKTQLQEELrlEHEQELKARLQQAEESFRqereglaqaa 749
Cdd:TIGR00606 415 ADLQSKERLKQEQADEI-----------RDEKKGLGRTIELKKEILEKKQ--EELKFVIKELQQLEGSSD---------- 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 750 awteekaRSLTRDLEQSHQEQLLSLMEKHALEKEELRKELseYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISN 829
Cdd:TIGR00606 472 -------RILELDQELRKAERELSKAEKNSLTETLKKEVK--SLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 830 LKLEELNGSQEELWQKIETIEQEKASI--QKMVEK-LKKQVSDLKLKNQQLDSENKELsQKNSQNKEELKTLNQRLAEML 906
Cdd:TIGR00606 543 DKMDKDEQIRKIKSRHSDELTSLLGYFpnKKQLEDwLHSKSKEINQTRDRLAKLNKEL-ASLEQNKNHINNELESKEEQL 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 907 CQKEDP--GTCTSEKWEQENESLKEELDRYKVQ------TSTLVSSLEAEL----------------SEVKLQTHIVEQE 962
Cdd:TIGR00606 622 SSYEDKlfDVCGSQDEESDLERLKEEIEKSSKQramlagATAVYSQFITQLtdenqsccpvcqrvfqTEAELQEFISDLQ 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 963 NLLL--KDELERLKQLHRCPDLSDFQQKMCSILSYNENLLKEKEV--LSEELKSCADKLAESSLLEHRIATIKEEREAWE 1038
Cdd:TIGR00606 702 SKLRlaPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIpeLRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEE 781
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1039 EQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIES-DLQVTRQEkeaLKQEVMSLHLQLQNAIDKdwvSETATHLSGLQ 1117
Cdd:TIGR00606 782 ESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGsDLDRTVQQ---VNQEKQEKQHELDTVVSK---IELNRKLIQDQ 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1118 GQQKRLSWNKLDHLMSEEPEL---------LCQESKRLQTVVQNTQADLTHSREKIRQLESNL--LPTKHQKQLNQSCTV 1186
Cdd:TIGR00606 856 QEQIQHLKSKTNELKSEKLQIgtnlqrrqqFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLekDQQEKEELISSKETS 935
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1187 KPIEQEKLA-LKRECEQSRKERSPTSRKVS-----QMSSLERELETIHLENEGLKKKQVRLDEKLmemqplRSAGTHSPS 1260
Cdd:TIGR00606 936 NKKAQDKVNdIKEKVKNIHGYMKDIENKIQdgkddYLKQKETELNTVNAQLEECEKHQEKINEDM------RLMRQDIDT 1009
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1261 SHWDLQLLQQQACPMVPREQFLQLQQQLLQAEKR------------SQHLQEELDNRTSEPNTVQGSQEHlvnlMEERMI 1328
Cdd:TIGR00606 1010 QKIQERWLQDNLTLRKRENELKEVEEELKQHLKEmgqmqvlqmkqeHQKLEENIDLIKRNHVLALGRQKG----YEKEIK 1085
|
....*..
gi 672056301 1329 EVEQKLK 1335
Cdd:TIGR00606 1086 HFKKELR 1092
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
435-1168 |
9.83e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.88 E-value: 9.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 435 NELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAE 514
Cdd:TIGR00606 304 NDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFE 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 515 KFGDLDPSSAEFF-LQEERL-------AQMRNEYEQQCRLLQDQVDELQSE--------------LEEYQAQGRVLRLPC 572
Cdd:TIGR00606 384 RGPFSERQIKNFHtLVIERQedeaktaAQLCADLQSKERLKQEQADEIRDEkkglgrtielkkeiLEKKQEELKFVIKEL 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 573 QNALSeeldGHGDGIEQDQE--------PGSGECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYE---KQLD 641
Cdd:TIGR00606 464 QQLEG----SSDRILELDQElrkaerelSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTtrtQMEM 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 642 HTRVACEKEQVAMKQKY-------------------EQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKAscRHEEEKK 702
Cdd:TIGR00606 540 LTKDKMDKDEQIRKIKSrhsdeltsllgyfpnkkqlEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHI--NNELESK 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 703 QLQMVFDEEKtqLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAW------------------------TEEKARS 758
Cdd:TIGR00606 618 EEQLSSYEDK--LFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVysqfitqltdenqsccpvcqrvfqTEAELQE 695
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 759 LTRDLEQ------SHQEQLLSLMEKHALEKEELRKeLSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKL 832
Cdd:TIGR00606 696 FISDLQSklrlapDKLKSTESELKKKEKRRDEMLG-LAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLL 774
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 833 EELNG---SQEELWQKIETIEQEKASIQKMVEKLKKQVSdlKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQK 909
Cdd:TIGR00606 775 GTIMPeeeSAKVCLTDVTIMERFQMELKDVERKIAQQAA--KLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLI 852
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 910 EDpgtctSEKWEQENESLKEELDRYKVQTSTlvSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKM 989
Cdd:TIGR00606 853 QD-----QQEQIQHLKSKTNELKSEKLQIGT--NLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK 925
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 990 CSILSYNEnllKEKEVLSEELKSCADKLaeSSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQM 1069
Cdd:TIGR00606 926 EELISSKE---TSNKKAQDKVNDIKEKV--KNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDM 1000
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1070 AQIESDLQVTRQEKEALKQEvmsLHLQLQNAIDKDWVSETATHLsGLQGQQKRLSWNKLDHLMSEEPELLCQESKRLQTV 1149
Cdd:TIGR00606 1001 RLMRQDIDTQKIQERWLQDN---LTLRKRENELKEVEEELKQHL-KEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGR 1076
|
810
....*....|....*....
gi 672056301 1150 VQNTQADLTHSREKIRQLE 1168
Cdd:TIGR00606 1077 QKGYEKEIKHFKKELREPQ 1095
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
424-564 |
1.06e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 424 EEYKERIAALKNELRQEREQiLQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSK 503
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKE-LAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672056301 504 LQRSLENVL--AEKFGDLDPS----SAEFFLQEERLAQMRNEYEQQcrlLQDQVDELQSELEEYQAQ 564
Cdd:COG4942 102 QKEELAELLraLYRLGRQPPLalllSPEDFLDAVRRLQYLKYLAPA---RREQAEELRADLAELAAL 165
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
627-933 |
1.22e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.40 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 627 LELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRT------LEKQISELQSEIADLQGQAAVLKE---AHHKASCRH 697
Cdd:COG3096 343 LRQQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAearleaAEEEVDSLKSQLADYQQALDVQQTraiQYQQAVQAL 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 698 EEEKKQLQMvfdeekTQLQEELRLEHEQELKARLQQAEESFRQERE--GLAQAAAWTEEKARSLTRDL------EQSHQ- 768
Cdd:COG3096 423 EKARALCGL------PDLTPENAEDYLAAFRAKEQQATEEVLELEQklSVADAARRQFEKAYELVCKIageverSQAWQt 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 769 --EQLLSLME-KHALEKEE-LRKELSEYHQRELQegRYESEKLQEENSILRNEitTLNEEDSISNLkLEELNGSQEELWQ 844
Cdd:COG3096 497 arELLRRYRSqQALAQRLQqLRAQLAELEQRLRQ--QQNAERLLEEFCQRIGQ--QLDAAEELEEL-LAELEAQLEELEE 571
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 845 KIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEM--LCQKEDPGTCTSEKWEQ 922
Cdd:COG3096 572 QAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMqqLLEREREATVERDELAA 651
|
330
....*....|.
gi 672056301 923 ENESLKEELDR 933
Cdd:COG3096 652 RKQALESQIER 662
|
|
| PRK00106 |
PRK00106 |
ribonuclease Y; |
696-798 |
1.37e-03 |
|
ribonuclease Y;
Pssm-ID: 178867 [Multi-domain] Cd Length: 535 Bit Score: 42.93 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 696 RHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQ--------SH 767
Cdd:PRK00106 50 KAERDAEHIKKTAKRESKALKKELLLEAKEEARKYREEIEQEFKSERQELKQIESRLTERATSLDRKDENlsskektlES 129
|
90 100 110
....*....|....*....|....*....|.
gi 672056301 768 QEQLLSLMEKHALEKEELRKELSEYHQRELQ 798
Cdd:PRK00106 130 KEQSLTDKSKHIDEREEQVEKLEEQKKAELE 160
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
807-1089 |
1.41e-03 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 42.60 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 807 LQEENSILRNEITTLNEEDSISNLKLEELNGSQ-EELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQqldsenKELS 885
Cdd:pfam00038 23 LEQQNKLLETKISELRQKKGAEPSRLYSLYEKEiEDLRRQLDTLTVERARLQLELDNLRLAAEDFRQKYE------DELN 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 886 QKNSQnKEELKTLNQRLAEMLCQKEDpgtctsekWEQENESLKEELDRYKVQTSTLVSSLEAELSEvklQTHIVEQENLL 965
Cdd:pfam00038 97 LRTSA-ENDLVGLRKDLDEATLARVD--------LEAKIESLKEELAFLKKNHEEEVRELQAQVSD---TQVNVEMDAAR 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 966 ----------LKDELERLKQLHRCPDLSDFQQKMcsilsynENLLKEKEVLSEELKSCADKLAESSL----LEHRIATIK 1031
Cdd:pfam00038 165 kldltsalaeIRAQYEEIAAKNREEAEEWYQSKL-------EELQQAAARNGDALRSAKEEITELRRtiqsLEIELQSLK 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 1032 EEREAWEEQSQDLKSQLALSQEKVQNledilknvnlQMAQIESDLQVTRQEKEALKQE 1089
Cdd:pfam00038 238 KQKASLERQLAETEERYELQLADYQE----------LISELEAELQETRQEMARQLRE 285
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
745-1084 |
1.45e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 43.09 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 745 LAQAAAWTEE--KARSLTRDLEQSHQEQLLSLMEKHALEK-EELRKELSEYHQRELQEGRYESEKLQE-----ENSILRN 816
Cdd:pfam05667 216 LAAAQEWEEEwnSQGLASRLTPEEYRKRKRTKLLKRIAEQlRSAALAGTEATSGASRSAQDLAELLSSfsgssTTDTGLT 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 817 EITTLNEEDSISNLKleELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELK 896
Cdd:pfam05667 296 KGSRFTHTEKLQFTN--EAPAATSSPPTKVETEEELQQQREEELEELQEQLEDLESSIQELEKEIKKLESSIKQVEEELE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 897 TLnqrlaemlcqkedpgtctsekwEQENESLKEEldrYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLkdELERLKQL 976
Cdd:pfam05667 374 EL----------------------KEQNEELEKQ---YKVKKKTLDLLPDAEENIAKLQALVDASAQRLV--ELAGQWEK 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 977 HRCPDLSDFQQkmcsilsynenllkEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQL-ALSQEK- 1054
Cdd:pfam05667 427 HRVPLIEEYRA--------------LKEAKSNKEDESQRKLEEIKELREKIKEVAEEAKQKEELYKQLVAEYeRLPKDVs 492
|
330 340 350
....*....|....*....|....*....|....*
gi 672056301 1055 ----VQNLEDILKNVNLQMAQIESDLQVTR-QEKE 1084
Cdd:pfam05667 493 rsayTRRILEIVKNIKKQKEEITKILSDTKsLQKE 527
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
831-1049 |
1.52e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 831 KLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKE 910
Cdd:COG4942 35 EIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 911 DPGTCTSEKWEQENESLKEELDRYKVqTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHrcpdlsdfqqkmc 990
Cdd:COG4942 115 RLGRQPPLALLLSPEDFLDAVRRLQY-LKYLAPARREQAEELRADLAELAALRAELEAERAELEALL------------- 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 672056301 991 silsynENLLKEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLA 1049
Cdd:COG4942 181 ------AELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIA 230
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
384-886 |
1.89e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.85 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 384 EKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELRQErEQILQQVGKQRVELEQEIEKAK 463
Cdd:pfam01576 144 EDQNSKLSKERKLLEERISEFTSNLAEEEEKAK-SLSKLKNKHEAMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQ 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 464 TEENYIRDRLALSLKENNRLENEL---LENAEKLAEYENLTSKLQRSLENVLAEKFGDLdpssaefflqeERLAQMRNEY 540
Cdd:pfam01576 222 EQIAELQAQIAELRAQLAKKEEELqaaLARLEEETAQKNNALKKIRELEAQISELQEDL-----------ESERAARNKA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 541 EQQCRLLQDQVDELQSELEEyqaqgrvlrlpcqnalseeldghgdgieqdqepgsgecnplnmSIEAELVIEQLKEQHHR 620
Cdd:pfam01576 291 EKQRRDLGEELEALKTELED-------------------------------------------TLDTTAAQQELRSKREQ 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 621 DLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMR---TLEKQISELQSEIADLQGQAAVLKEAHHKASCRH 697
Cdd:pfam01576 328 EVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRnkaNLEKAKQALESENAELQAELRTLQQAKQDSEHKR 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 698 EEEKKQLQmvfdeektqlqeELRLEHEQELKARLQQAEESFR--QEREGLAQAAAWTEEKARSLTRDLEQSHQEqllsLM 775
Cdd:pfam01576 408 KKLEGQLQ------------ELQARLSESERQRAELAEKLSKlqSELESVSSLLNEAEGKNIKLSKDVSSLESQ----LQ 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 776 EKHALEKEELRKELSEYHQ-RELQEGRYE-SEKLQEENSILRN---EITTLNEEDSISNLKLEELNGSqeelwqkIETIE 850
Cdd:pfam01576 472 DTQELLQEETRQKLNLSTRlRQLEDERNSlQEQLEEEEEAKRNverQLSTLQAQLSDMKKKLEEDAGT-------LEALE 544
|
490 500 510
....*....|....*....|....*....|....*.
gi 672056301 851 QEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQ 886
Cdd:pfam01576 545 EGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQ 580
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
373-1089 |
2.13e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.79 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 373 LERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRneynlRKLDEEYKERIAALKNELRQEREQILQQVGKQR 452
Cdd:pfam05483 70 FENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQEN-----RKIIEAQRKAIQELQFENEKVSLKLEEEIQENK 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 453 vELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQEER 532
Cdd:pfam05483 145 -DLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 533 LAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQ------NALSEELDGHGDGIEQDQEPG---SGECNPLNM 603
Cdd:pfam05483 224 IQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEesrdkaNQLEEKTKLQDENLKELIEKKdhlTKELEDIKM 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 604 SIEAELVIEQLKEQH----HRDLCHLRLELEDKVRHYEK-QLDHTRVACEKEQV--AMKQKYEQGMRTLEKQISELQSEI 676
Cdd:pfam05483 304 SLQRSMSTQKALEEDlqiaTKTICQLTEEKEAQMEELNKaKAAHSFVVTEFEATtcSLEELLRTEQQRLEKNEDQLKIIT 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 677 ADLQGQAAVLKEAHhKASCRHEEEKKQLQMVFDEEKTQLQEELRLEH--------EQELKARLQQAEESFR--------- 739
Cdd:pfam05483 384 MELQKKSSELEEMT-KFKNNKEVELEELKKILAEDEKLLDEKKQFEKiaeelkgkEQELIFLLQAREKEIHdleiqltai 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 740 --QEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKE-----ELRKELSEYHQRELQEGRY--ESEKLQEE 810
Cdd:pfam05483 463 ktSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAsdmtlELKKHQEDIINCKKQEERMlkQIENLEEK 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 811 NSILRNEITTLNEE----DSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQ 886
Cdd:pfam05483 543 EMNLRDELESVREEfiqkGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK 622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 887 KNSQNKEELKTLNQRLAEMLCQKEDpgtcTSEKWEQENESLKEELDRYKVQTSTLVSSLEaelsevklQTHIVEQENLLL 966
Cdd:pfam05483 623 KGSAENKQLNAYEIKVNKLELELAS----AKQKFEEIIDNYQKEIEDKKISEEKLLEEVE--------KAKAIADEAVKL 690
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 967 KDELERlkqlhRCpdlsdfqqkmcsilsynENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSqdlks 1046
Cdd:pfam05483 691 QKEIDK-----RC-----------------QHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAA----- 743
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 672056301 1047 qlalsqekvqnLEDILKNVNLQMAQIESDLQVTRQEKEALKQE 1089
Cdd:pfam05483 744 -----------LEIELSNIKAELLSLKKQLEIEKEEKEKLKME 775
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
531-824 |
2.23e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 531 ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLpCQNALSEELDghgdgieqdqepgsgecnplNMSIEAElv 610
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEID--------------------VASAERE-- 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 611 IEQLKEQHHrdlchlRLELE-DKVRHYEKQLDhtrvACEKEQVAMKQKYEQgmrtLEKQISELQSEIADLQGQAAVLKEA 689
Cdd:COG4913 670 IAELEAELE------RLDASsDDLAALEEQLE----ELEAELEELEEELDE----LKGEIGRLEKELEQAEEELDELQDR 735
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 690 HHKASCRHEEEKKQLqmvFDEE-KTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQA-----AAWTEEkARSLTRDL 763
Cdd:COG4913 736 LEAAEDLARLELRAL---LEERfAAALGDAVERELRENLEERIDALRARLNRAEEELERAmrafnREWPAE-TADLDADL 811
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672056301 764 EQSHQ-EQLLSLMEKHALEK-----EELRKELSEYHQRELQegryesEKLQEENSILRNEITTLNEE 824
Cdd:COG4913 812 ESLPEyLALLDRLEEDGLPEyeerfKELLNENSIEFVADLL------SKLRRAIREIKERIDPLNDS 872
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
656-868 |
2.28e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 656 QKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQmVFDEEKTQLQEELRlEHEQELKARLQQAE 735
Cdd:COG4942 37 AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA-ELEKEIAELRAELE-AQKEELAELLRALY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 736 ESFRQEREGLAQAAAWTEEKARSLT--RDLEQSHQEQLLSLMEKHAlEKEELRKELSEyHQRELQEGRyesEKLQEENSI 813
Cdd:COG4942 115 RLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLA-ELAALRAELEA-ERAELEALL---AELEEERAA 189
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 672056301 814 LRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVS 868
Cdd:COG4942 190 LEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
442-786 |
2.37e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 442 EQILQQVGKQRVELEQEIEKAKTEENYIRDRLAlSLKENNRLENELLENAEKLAEyENLTSKLQRSLENVLAEKfgdldp 521
Cdd:COG3096 835 EAELAALRQRRSELERELAQHRAQEQQLRQQLD-QLKEQLQLLNKLLPQANLLAD-ETLADRLEELREELDAAQ------ 906
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 522 sSAEFFLQE--ERLAQMrneyEQQCRLLQ---DQVDELQSELEEYQAQGRVLRLPCQnALSEELDGHGDGIEQDQEPGSG 596
Cdd:COG3096 907 -EAQAFIQQhgKALAQL----EPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIF-ALSEVVQRRPHFSYEDAVGLLG 980
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 597 ECNPLNMSIEAELviEQLKEQhhrdlchlRLELEDKVRHYEKQLDHTrvacEKEQVAMKQKYEQGMRTLEkqisELQSEI 676
Cdd:COG3096 981 ENSDLNEKLRARL--EQAEEA--------RREAREQLRQAQAQYSQY----NQVLASLKSSRDAKQQTLQ----ELEQEL 1042
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 677 ADLQGQAAVlkEAHHKASCRHEEEKKQLQmVFDEEKTQLQEEL-RLEHEQE-LKARLQQAEESFRQEREGLAQA-AAWTE 753
Cdd:COG3096 1043 EELGVQADA--EAEERARIRRDELHEELS-QNRSRRSQLEKQLtRCEAEMDsLQKRLRKAERDYKQEREQVVQAkAGWCA 1119
|
330 340 350
....*....|....*....|....*....|....
gi 672056301 754 EKARSLTRDLEQS-HQEQLLslmekhALEKEELR 786
Cdd:COG3096 1120 VLRLARDNDVERRlHRRELA------YLSADELR 1147
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
308-795 |
2.64e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 308 ERILDTWQEEgIENSQEILKALDFSLDGNINLTELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLr 387
Cdd:COG4913 287 QRRLELLEAE-LEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARL- 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 388 sdldkAEKLKSLMASEVDDHHAAIERRNEynLRKLDEEYKERIAALKNELRQEREQiLQQVGKQRVELEQEIEK-AKTEE 466
Cdd:COG4913 365 -----EALLAALGLPLPASAEEFAALRAE--AAALLEALEEELEALEEALAEAEAA-LRDLRRELRELEAEIASlERRKS 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 467 NY------IRDRL--ALSLKENN-RLENELLENAEKLAEYENltsklqrSLENVL----------AEKFGD----LDPSS 523
Cdd:COG4913 437 NIparllaLRDALaeALGLDEAElPFVGELIEVRPEEERWRG-------AIERVLggfaltllvpPEHYAAalrwVNRLH 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 524 AEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQA------QGRVLRLPCQNAlsEELDGHGDGIEQD----QEP 593
Cdd:COG4913 510 LRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAwleaelGRRFDYVCVDSP--EELRRHPRAITRAgqvkGNG 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 594 GSGECNPlNMSIEAELVI-----EQLK---------EQHHRDLCHLRLELEDKVRHYEKQLDHTRvacekeQVAMKQKYE 659
Cdd:COG4913 588 TRHEKDD-RRRIRSRYVLgfdnrAKLAaleaelaelEEELAEAEERLEALEAELDALQERREALQ------RLAEYSWDE 660
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 660 QGMRTLEKQISELQSEIADL---QGQAAVLKEAHHKASCRHEEEKKQLQMVfDEEKTQLQEELR--LEHEQELKARLQQA 734
Cdd:COG4913 661 IDVASAEREIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDEL-KGEIGRLEKELEqaEEELDELQDRLEAA 739
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672056301 735 EESFRQEREGLAqAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQR 795
Cdd:COG4913 740 EDLARLELRALL-EERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
604-889 |
2.77e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 41.91 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 604 SIEAELVIEQLKEQHHRDLcHLRLELEDkVRHYEKQLDHTRVACEKEQVAMKQ----KYEQGMRTLEKQISELQSEIADL 679
Cdd:pfam05262 176 SISDKKVVEALREDNEKGV-NFRRDMTD-LKERESQEDAKRAQQLKEELDKKQidadKAQQKADFAQDNADKQRDEVRQK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 680 QGQAavlKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREglaqaaawtEEKarsl 759
Cdd:pfam05262 254 QQEA---KNLPKPADTSSPKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKQESKA---------SEK---- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 760 trdleqshqeqllsLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNL---KLEELN 836
Cdd:pfam05262 318 --------------EAEDKELEAQKKREPVAEDLQKTKPQVEAQPTSLNEDAIDSSNPVYGLKVVDPITNLselVLIDLK 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672056301 837 GSQEELWQKIETI------EQEKA--SIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNS 889
Cdd:pfam05262 384 TEVRLRESAQQTIrrrglyEREKDlvAIAITSGNAKLQLVDIDLKNLEVIKESNFEIAKNS 444
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
754-968 |
3.00e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 754 EKARSLTRDLEQsHQEQLLSLMEKHALEKEELRK-------ELSEYHQRELQEgrYESE--KLQEENSILRNEITTLNEE 824
Cdd:PRK05771 46 RKLRSLLTKLSE-ALDKLRSYLPKLNPLREEKKKvsvksleELIKDVEEELEK--IEKEikELEEEISELENEIKELEQE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 825 dsISNLK-LEELNGSQEELWQKiETIEQEKASIQKMVEKLKKQVSDLKL-----------------KNQQLDSENKELSQ 886
Cdd:PRK05771 123 --IERLEpWGNFDLDLSLLLGF-KYVSVFVGTVPEDKLEELKLESDVENveyistdkgyvyvvvvvLKELSDEVEEELKK 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 887 KNSQNKE--ELKTLNQRLAEMLCQKEDpgtctsekWEQENESLKEELDRYKVQTSTLVSSLEAELSevklqtHIVEQENL 964
Cdd:PRK05771 200 LGFERLEleEEGTPSELIREIKEELEE--------IEKERESLLEELKELAKKYLEELLALYEYLE------IELERAEA 265
|
....
gi 672056301 965 LLKD 968
Cdd:PRK05771 266 LSKF 269
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
673-1343 |
3.35e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 673 QSEIADLQGQAAVLKEAHH-KASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAW 751
Cdd:TIGR00618 215 DTYHERKQVLEKELKHLREaLQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 752 TEEKARSLTRdLEQSHQEQLLSLMEKHALEKEELRKELSEYHQR-ELQEGRYESEKLQEENSILRNEIttlNEEDSISNL 830
Cdd:TIGR00618 295 LAAHIKAVTQ-IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQsSIEEQRRLLQTLHSQEIHIRDAH---EVATSIREI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 831 KLEELNGSQ--EELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQrlaemlcq 908
Cdd:TIGR00618 371 SCQQHTLTQhiHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAEL-------- 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 909 KEDPGTCTSEKWEQENESLKEELDRYKVQTSTLvSSLEAELSEVKlQTHIVEQENLLLKDELERLkqlhRCPDLSDFQQK 988
Cdd:TIGR00618 443 CAAAITCTAQCEKLEKIHLQESAQSLKEREQQL-QTKEQIHLQET-RKKAVVLARLLELQEEPCP----LCGSCIHPNPA 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 989 MCSIL------SYNENLLKEKEVLSEELKScadklaesslLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDIL 1062
Cdd:TIGR00618 517 RQDIDnpgpltRRMQRGEQTYAQLETSEED----------VYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDI 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1063 KNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETathlsglQGQQKRLSWNKLDHLMSEEPELLCQE 1142
Cdd:TIGR00618 587 PNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLH-------LQQCSQELALKLTALHALQLTLTQER 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1143 SKRLQTVVQNTQADLTHSREkirqlesnLLPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRKVSQMSS--- 1219
Cdd:TIGR00618 660 VREHALSIRVLPKELLASRQ--------LALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSslg 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1220 --LERELETIhleNEGLKKKQVRLDEKLMEMQPLRSagTHSPSSHWDLQLLQQ--QACPMVPREQFLQLQQQLLQAEKRS 1295
Cdd:TIGR00618 732 sdLAAREDAL---NQSLKELMHQARTVLKARTEAHF--NNNEEVTAALQTGAElsHLAAEIQFFNRLREEDTHLLKTLEA 806
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 1296 QHLQ--------------------EELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKLKLVKRLLQE 1343
Cdd:TIGR00618 807 EIGQeipsdedilnlqcetlvqeeEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
808-1063 |
3.45e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.96 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 808 QEENSILRNEITTLneEDSISNLkleelngsQEELWQKIETIEQEKASIQKMVEKLKKQVSDL-KLKNQQLDSENKELSQ 886
Cdd:TIGR01612 1103 KEENIKYADEINKI--KDDIKNL--------DQKIDHHIKALEEIKKKSENYIDEIKAQINDLeDVADKAISNDDPEEIE 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 887 KNSQN-----------KEELKTLNQRLAEMLCQK---EDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEA---EL 949
Cdd:TIGR01612 1173 KKIENivtkidkkkniYDEIKKLLNEIAEIEKDKtslEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAyieDL 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 950 SEVKLQTHIVEQENLLLKDELERLKQLhrcpDLSDFQQKMCSILSYNENllkekEVLSEeLKSCADKLAESSLLEHRIAT 1029
Cdd:TIGR01612 1253 DEIKEKSPEIENEMGIEMDIKAEMETF----NISHDDDKDHHIISKKHD-----ENISD-IREKSLKIIEDFSEESDIND 1322
|
250 260 270
....*....|....*....|....*....|....
gi 672056301 1030 IKEEREAWEEQSQDLKSQLALSQEKVQNLEDILK 1063
Cdd:TIGR01612 1323 IKKELQKNLLDAQKHNSDINLYLNEIANIYNILK 1356
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1189-1390 |
3.54e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1189 IEQEKLALKRECEQSRK-ERSPTSRKVS-------------QMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSA 1254
Cdd:pfam17380 301 LRQEKEEKAREVERRRKlEEAEKARQAEmdrqaaiyaeqerMAMERERELERIRQEERKRELERIRQEEIAMEISRMREL 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1255 GThspsshwdLQLLQQQACPMVPREQFLQLQQQLLQAEKRSQHLQEELDNRTSEPNTVQGSQEHLVNLMEERMIEVE--- 1331
Cdd:pfam17380 381 ER--------LQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMErvr 452
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 672056301 1332 ----QKLKLVKRLLQEKVNQLKEQLCKNSKTDAmvKDLYVENAQLLKALEMTEQRQKTAEKKN 1390
Cdd:pfam17380 453 leeqERQQQVERLRQQEEERKRKKLELEKEKRD--RKRAEEQRRKILEKELEERKQAMIEEER 513
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
611-1366 |
4.20e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 611 IEQLKEQHHRDLCHLRLELEDKvrhyEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAH 690
Cdd:PTZ00121 1029 IEELTEYGNNDDVLKEKDIIDE----DIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAK 1104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 691 HKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEE--------------KA 756
Cdd:PTZ00121 1105 KTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEarkaedakkaeaarKA 1184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 757 RSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQ-------RELQEGRYESEKLQEENSILRNEITTLNEEDSISN 829
Cdd:PTZ00121 1185 EEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDakkaeavKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAH 1264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 830 LKLEELNGSQEElwqKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRL---AEML 906
Cdd:PTZ00121 1265 FARRQAAIKAEE---ARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAkkkAEEA 1341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 907 CQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEA--ELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSD 984
Cdd:PTZ00121 1342 KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAakKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD 1421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 985 FQQKMCSILSYNENLLK--EKEVLSEELKSCAD---------KLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQE 1053
Cdd:PTZ00121 1422 EAKKKAEEKKKADEAKKkaEEAKKADEAKKKAEeakkaeeakKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADE 1501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1054 KVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSWNKLDHLMS 1133
Cdd:PTZ00121 1502 AKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALR 1581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1134 EEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKH-QKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSR 1212
Cdd:PTZ00121 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEElKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI 1661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1213 KVSQMSSLE----RELETIHLENEGLKKKQVRLDEKLMEMQPLRsagthspsshwdlQLLQQQACPMVPREQFLQLQQQL 1288
Cdd:PTZ00121 1662 KAAEEAKKAeedkKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE-------------ELKKKEAEEKKKAEELKKAEEEN 1728
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672056301 1289 LQAEKRSQHLQEELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKLKLVKRLLQEKVNqlKEQLCKNSKTDAMVKDLY 1366
Cdd:PTZ00121 1729 KIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD--EEDEKRRMEVDKKIKDIF 1804
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
839-1098 |
4.38e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 839 QEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQ--QLDSENKELSQKNSQNKEELKTLNQRLAEMlcqkedpgtct 916
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEA----------- 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 917 sekwEQENESLKEELDRYK-----VQTSTLVSSLEAELSEVKLQthiveqenllLKDELERLKQLHrcPDLsdfqqkmcs 991
Cdd:COG3206 239 ----EARLAALRAQLGSGPdalpeLLQSPVIQQLRAQLAELEAE----------LAELSARYTPNH--PDV--------- 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 992 ilsynENLLKEKEVLSEELKSCADKLaessllehrIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKnvnlQMAQ 1071
Cdd:COG3206 294 -----IALRAQIAALRAQLQQEAQRI---------LASLEAELEALQAREASLQAQLAQLEARLAELPELEA----ELRR 355
|
250 260
....*....|....*....|....*..
gi 672056301 1072 IESDLQVTRQEKEALKQEVMSLHLQLQ 1098
Cdd:COG3206 356 LEREVEVARELYESLLQRLEEARLAEA 382
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
442-750 |
4.76e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 4.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 442 EQILQQVGKQRVELEQEIEKAKTEENYIRDRLAlSLKENNRLENELLENAEKLA------EYENLTSKLQRSLEnvlAEK 515
Cdd:PRK04863 836 EAELRQLNRRRVELERALADHESQEQQQRSQLE-QAKEGLSALNRLLPRLNLLAdetladRVEEIREQLDEAEE---AKR 911
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 516 FGDLDPSSAEfflQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNAlseeldgHGDGIEQDQEPGS 595
Cdd:PRK04863 912 FVQQHGNALA---QLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRR-------AHFSYEDAAEMLA 981
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 596 GecnplnmsiEAELViEQLKEQhHRDLCHLRLELEDKVRHYEKQLDhtrvacEKEQVAMKQKYEqgMRTLEKQISELQSE 675
Cdd:PRK04863 982 K---------NSDLN-EKLRQR-LEQAEQERTRAREQLRQAQAQLA------QYNQVLASLKSS--YDAKRQMLQELKQE 1042
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672056301 676 IADLQGQAAvlKEAHHKASCRHEEEKKQLQMVfDEEKTQLQEELRLEHEQ--ELKARLQQAEESFRQEREGLAQAAA 750
Cdd:PRK04863 1043 LQDLGVPAD--SGAEERARARRDELHARLSAN-RSRRNQLEKQLTFCEAEmdNLTKKLRKLERDYHEMREQVVNAKA 1116
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
627-1097 |
4.77e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.63 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 627 LELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKeahhKASCRHEEEKKQLQM 706
Cdd:pfam05483 186 MDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLL----IQITEKENKMKDLTF 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 707 VFDEEK---TQLQEELRLEHEQelKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLeQSHQEQLLSLMEKHALEKE 783
Cdd:pfam05483 262 LLEESRdkaNQLEEKTKLQDEN--LKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDL-QIATKTICQLTEEKEAQME 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 784 ELRKELSEyHQRELQEGRYESEKLQEensILRNEITTL-NEEDSISNLKLEELNGSQEelwqkIETIEQEKASIQKMVEK 862
Cdd:pfam05483 339 ELNKAKAA-HSFVVTEFEATTCSLEE---LLRTEQQRLeKNEDQLKIITMELQKKSSE-----LEEMTKFKNNKEVELEE 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 863 LKKQVSDlklkNQQLDSENKELSQKnsqnKEELKTLNQRLAEMLCQKEDP----------GTCTSEKWEQENESLKEELD 932
Cdd:pfam05483 410 LKKILAE----DEKLLDEKKQFEKI----AEELKGKEQELIFLLQAREKEihdleiqltaIKTSEEHYLKEVEDLKTELE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 933 RYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELErlkqlhrcpDLSDFQQKMCSILSYNENLLKEKEVLSEELKS 1012
Cdd:pfam05483 482 KEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQE---------DIINCKKQEERMLKQIENLEEKEMNLRDELES 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 1013 CADKLAESSllehriATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMS 1092
Cdd:pfam05483 553 VREEFIQKG------DEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSA 626
|
....*
gi 672056301 1093 LHLQL 1097
Cdd:pfam05483 627 ENKQL 631
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
367-473 |
5.83e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 367 AEIRHLLERVDQVVREKEKLRSDLDKAEKLKslmASEVDDHHAAIERRneynLRKLDEEYKERIAALkNELRQEREQILQ 446
Cdd:COG0542 411 EELDELERRLEQLEIEKEALKKEQDEASFER---LAELRDELAELEEE----LEALKARWEAEKELI-EEIQELKEELEQ 482
|
90 100
....*....|....*....|....*..
gi 672056301 447 QVGKqRVELEQEIEKAKTEENYIRDRL 473
Cdd:COG0542 483 RYGK-IPELEKELAELEEELAELAPLL 508
|
|
| GBP_C |
cd16269 |
Guanylate-binding protein, C-terminal domain; Guanylate-binding protein (GBP), C-terminal ... |
709-821 |
6.37e-03 |
|
Guanylate-binding protein, C-terminal domain; Guanylate-binding protein (GBP), C-terminal domain. Guanylate-binding proteins (GBPs) are synthesized after activation of the cell by interferons. The biochemical properties of GBPs are clearly different from those of Ras-like and heterotrimeric GTP-binding proteins. They bind guanine nucleotides with low affinity (micromolar range), are stable in their absence, and have a high turnover GTPase. In addition to binding GDP/GTP, they have the unique ability to bind GMP with equal affinity and hydrolyze GTP not only to GDP, but also to GMP. This C-terminal domain has been shown to mediate inhibition of endothelial cell proliferation by inflammatory cytokines.
Pssm-ID: 293879 [Multi-domain] Cd Length: 291 Bit Score: 40.25 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 709 DEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKarslTRDLEQSHQEQLLSLMEKHALEKEELRKE 788
Cdd:cd16269 181 AEAEAILQADQALTEKEKEIEAERAKAEAAEQERKLLEEQQRELEQK----LEDQERSYEEHLRQLKEKMEEERENLLKE 256
|
90 100 110
....*....|....*....|....*....|....
gi 672056301 789 LSEYHQRELQEGRYESEK-LQEENSILRNEITTL 821
Cdd:cd16269 257 QERALESKLKEQEALLEEgFKEQAELLQEEIRSL 290
|
|
| CCCAP |
pfam15964 |
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in ... |
624-937 |
6.98e-03 |
|
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in eukaryotes. CCCAP is also known as SDCCAG8, serologically defined colon cancer antigen 8. It is associated with the centrosome.
Pssm-ID: 435040 [Multi-domain] Cd Length: 703 Bit Score: 41.04 E-value: 6.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 624 HLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQ 703
Cdd:pfam15964 360 QLKSELERQKERLEKELASQQEKRAQEKEALRKEMKKEREELGATMLALSQNVAQLEAQVEKVTREKNSLVSQLEEAQKQ 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 704 L------------QMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLA--------------QAAAWTEEKAR 757
Cdd:pfam15964 440 LasqemdvtkvcgEMRYQLNQTKMKKDEAEKEHREYRTKTGRQLEIKDQEIEKLGlelseskqrleqaqQDAARAREECL 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 758 SLTRDLEQSHQEQLLSLMEKHALEK---EELRKELSEYHQRE------LQEGRYESEKLQEENSILRNE----ITTLNEE 824
Cdd:pfam15964 520 KLTELLGESEHQLHLTRLEKESIQQsfsNEAKAQALQAQQREqeltqkMQQMEAQHDKTVNEQYSLLTSqntfIAKLKEE 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 825 DSISNLKLEELNGSQEelwQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAE 904
Cdd:pfam15964 600 CCTLAKKLEEITQKSR---SEVEQLSQEKEYLQDRLEKLQKRNEELEEQCVQHGRMHERMKQRLRQLDKHCQATAQQLVQ 676
|
330 340 350
....*....|....*....|....*....|...
gi 672056301 905 MLCQKedpgtctsEKWEQENESLKEELDRYKVQ 937
Cdd:pfam15964 677 LLSKQ--------NQLFKERQNLTEEVQSLRSQ 701
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
721-874 |
7.45e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 7.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 721 LEHEQELKARLQQAE-ESFRQEREGLAQAaawtEEKARSLTRDLEQSHQEQL--LSLMEKHALEKEE-LRKELSEYHQRE 796
Cdd:PRK12704 34 KEAEEEAKRILEEAKkEAEAIKKEALLEA----KEEIHKLRNEFEKELRERRneLQKLEKRLLQKEEnLDRKLELLEKRE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 797 --LQEGRYESEKLQEENSILRNEITTLNEE-----DSISNLKLEElngSQEELWQKIE-TIEQEKASIQKMVEKLKKQVS 868
Cdd:PRK12704 110 eeLEKKEKELEQKQQELEKKEEELEELIEEqlqelERISGLTAEE---AKEILLEKVEeEARHEAAVLIKEIEEEAKEEA 186
|
....*.
gi 672056301 869 DLKLKN 874
Cdd:PRK12704 187 DKKAKE 192
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
428-561 |
7.64e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 428 ERIAALK-NELRQEREQILQQVGKQRVELEQEIEKAKTEENyirdrlalsLKENNRLENELLENAEKLAEYENltsKLQR 506
Cdd:PRK12704 26 KKIAEAKiKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEI---------HKLRNEFEKELRERRNELQKLEK---RLLQ 93
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 672056301 507 SlENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEY 561
Cdd:PRK12704 94 K-EENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
431-564 |
9.16e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 40.44 E-value: 9.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 431 AALKNELRQEREQiLQQVGKQRVELEQEIEKAKTEENYIR------DRLALSLKENNRLENEL--LENAEKLAEyenlts 502
Cdd:COG0497 154 EELLEEYREAYRA-WRALKKELEELRADEAERARELDLLRfqleelEAAALQPGEEEELEEERrrLSNAEKLRE------ 226
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 503 KLQRSLEnVLAEkfgdlDPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQD---QVDELQSELEEYQAQ 564
Cdd:COG0497 227 ALQEALE-ALSG-----GEGGALDLLGQalralERLAEYDPSLAELAERLESaliELEEAASELRRYLDS 290
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
359-565 |
9.45e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 9.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 359 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKlkslmasEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELR 438
Cdd:COG3883 29 QAELEAAQAELDALQAELEELNEEYNELQAELEALQA-------EIDKLQAEIAEAEA-EIEERREELGERARALYRSGG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672056301 439 Q-----------------EREQILQQVGKQRVELEQEIEKAKTEENYIRDRLAlslKENNRLENELLENAEKLAEYENLT 501
Cdd:COG3883 101 SvsyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELE---AKLAELEALKAELEAAKAELEAQQ 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672056301 502 SKLQRSLENVLAEKfgdldpssAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQG 565
Cdd:COG3883 178 AEQEALLAQLSAEE--------AAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
|
| |
