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Conserved domains on  [gi|672037511|ref|XP_008757859|]
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dipeptidyl peptidase 1 isoform X1 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CathepsinC_exc super family cl07399
Cathepsin C exclusion domain; Cathepsin C (dipeptidyl peptidase I) is the physiological ...
 25-106 7.20e-41

Cathepsin C exclusion domain; Cathepsin C (dipeptidyl peptidase I) is the physiological activator of a group of serine proteases. This domain corresponds to the exclusion domain whose structure excludes the approach of a polypeptide apart from its termini. It forms an enclosed beta barrel structure composed from 8 anti-parallel beta strands. Based on a structural comparison and interaction data, it is suggested that the exclusion domain originates from a metallo-protease inhibitor.


The actual alignment was detected with superfamily member pfam08773:

Pssm-ID: 462598 [Multi-domain]  Cd Length: 118  Bit Score: 132.02  E-value: 7.20e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672037511   25 DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEP----TEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLNDYK 100
Cdd:pfam08773   1 DTPANCTYEDIVGTWVFQVGEGGNDKRVNCSHPGPdnfnTSKTVTVSLQKPDVAIDELGNTGFWTLIYNQGFEVVINGRK 80


                  ....*.
gi 672037511  101 WFAFFK 106
Cdd:pfam08773  81 YFAFFK 86
 
Name Accession Description Interval E-value
CathepsinC_exc pfam08773
Cathepsin C exclusion domain; Cathepsin C (dipeptidyl peptidase I) is the physiological ...
 25-106 7.20e-41

Cathepsin C exclusion domain; Cathepsin C (dipeptidyl peptidase I) is the physiological activator of a group of serine proteases. This domain corresponds to the exclusion domain whose structure excludes the approach of a polypeptide apart from its termini. It forms an enclosed beta barrel structure composed from 8 anti-parallel beta strands. Based on a structural comparison and interaction data, it is suggested that the exclusion domain originates from a metallo-protease inhibitor.


Pssm-ID: 462598 [Multi-domain]  Cd Length: 118  Bit Score: 132.02  E-value: 7.20e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672037511   25 DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEP----TEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLNDYK 100
Cdd:pfam08773   1 DTPANCTYEDIVGTWVFQVGEGGNDKRVNCSHPGPdnfnTSKTVTVSLQKPDVAIDELGNTGFWTLIYNQGFEVVINGRK 80


                  ....*.
gi 672037511  101 WFAFFK 106
Cdd:pfam08773  81 YFAFFK 86
PTZ00364 PTZ00364
dipeptidyl-peptidase I precursor; Provisional
 22-109 5.44e-08

dipeptidyl-peptidase I precursor; Provisional


Pssm-ID: 240381 [Multi-domain]  Cd Length: 548  Bit Score: 50.27  E-value: 5.44e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672037511  22 VSSDTPANCTYPDLLGTWVFQV-GPRHPRSH--INC-SVMEPTEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLN 97
Cdd:PTZ00364  11 LSEYTPARCLSDQYLGLWSFTItKFKYLKTNdrVECpASISSRVTKLIVTLMPNGAAQEQGGATGRWTPVYNHGFEIRIA 90

                         90
                 ....*....|..
gi 672037511  98 DYKWFAFFKDVT 109
Cdd:PTZ00364  91 GLVYLFISAWAE 102
 
Name Accession Description Interval E-value
CathepsinC_exc pfam08773
Cathepsin C exclusion domain; Cathepsin C (dipeptidyl peptidase I) is the physiological ...
 25-106 7.20e-41

Cathepsin C exclusion domain; Cathepsin C (dipeptidyl peptidase I) is the physiological activator of a group of serine proteases. This domain corresponds to the exclusion domain whose structure excludes the approach of a polypeptide apart from its termini. It forms an enclosed beta barrel structure composed from 8 anti-parallel beta strands. Based on a structural comparison and interaction data, it is suggested that the exclusion domain originates from a metallo-protease inhibitor.


Pssm-ID: 462598 [Multi-domain]  Cd Length: 118  Bit Score: 132.02  E-value: 7.20e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672037511   25 DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEP----TEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLNDYK 100
Cdd:pfam08773   1 DTPANCTYEDIVGTWVFQVGEGGNDKRVNCSHPGPdnfnTSKTVTVSLQKPDVAIDELGNTGFWTLIYNQGFEVVINGRK 80


                  ....*.
gi 672037511  101 WFAFFK 106
Cdd:pfam08773  81 YFAFFK 86
PTZ00364 PTZ00364
dipeptidyl-peptidase I precursor; Provisional
 22-109 5.44e-08

dipeptidyl-peptidase I precursor; Provisional


Pssm-ID: 240381 [Multi-domain]  Cd Length: 548  Bit Score: 50.27  E-value: 5.44e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672037511  22 VSSDTPANCTYPDLLGTWVFQV-GPRHPRSH--INC-SVMEPTEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLN 97
Cdd:PTZ00364  11 LSEYTPARCLSDQYLGLWSFTItKFKYLKTNdrVECpASISSRVTKLIVTLMPNGAAQEQGGATGRWTPVYNHGFEIRIA 90

                         90
                 ....*....|..
gi 672037511  98 DYKWFAFFKDVT 109
Cdd:PTZ00364  91 GLVYLFISAWAE 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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