NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|578799991|ref|XP_006711058|]
View 

striatin-interacting protein 1 isoform X1 [Homo sapiens]

Protein Classification

FAR11/STRIP family protein( domain architecture ID 10570976)

FAR11/STRIP family protein containing N1221 and DUF3402 domains, similar to vertebrate striatin-interacting proteins and Schizosaccharomyces pombe factor arrest protein 11 that participates in the control of the reentry into the cell cycle following pheromone treatment

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3402 pfam11882
Domain of unknown function (DUF3402); This domain is functionally uncharacterized. This domain ...
 154-477 1.91e-116

Domain of unknown function (DUF3402); This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 350 to 473 amino acids in length. This domain is found associated with pfam07923.


:

Pssm-ID: 463384  Cd Length: 432  Bit Score: 350.85  E-value: 1.91e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  154 PRPIHESIKTLKQHKYTSIAEVQAQMEEEYLR--------------SPLSGGEEEVEQVPA---------------ETLY 204
Cdd:pfam11882   1 PASILEAGELFSKRVRMTRAMRQLWEERERFMkfergwdlddddedDDLDELTLEVDYGPRpetededvkrrldavEQFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  205 QGLLPSLPQYM-----IALLKILLAAAPTSKAKTDSINILADVLPEEMPT-TVLQSM---------KLGVDVNRHKEVIV 269
Cdd:pfam11882  81 RDALPHLQSLVivllkIILANVTALVTQSSAANGQNINFAADELPPETGLsTPGASPrgnnnnavlIEELDVLRTREITL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  270 KAISAVLLLLLKHFKLNHVYQFEYMAQHLVFANCIPLILKFF-NQNIMSYITAKN------------------------- 323
Cdd:pfam11882 161 KAVSGILLLLLKWFKLSHVLKFEYLTQLLLDSNYLPLVLKLFaNQDIQQAVTSKNdrlelsffnfcnkrsrhpppepppp 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  324 --------------------------SISVLDYPHCVVHELPEltaesleagdsNQFCWRNLFSCINLLRILNKLTKWKH 377
Cdd:pfam11882 241 npeyeesseddaapppikrrrspprpEVDELGYPTNPLPEEPI-----------TDFSWRNFFSLINYLRIMQKICKNKA 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  378 SRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWD 457
Cdd:pfam11882 310 HRNLLLVQYKSSNILKKSLKVPQPELRLYTLKLFKNQVPYCGRKWRQSNMRVITAIYLHCRPELRDDWLAGSDVDAEVEE 389

                         410       420
                  ....*....|....*....|
gi 578799991  458 FQAEECALRANIERFNARRY 477
Cdd:pfam11882 390 ALPLEQALRGLTHWYNLRRY 409
 
Name Accession Description Interval E-value
DUF3402 pfam11882
Domain of unknown function (DUF3402); This domain is functionally uncharacterized. This domain ...
 154-477 1.91e-116

Domain of unknown function (DUF3402); This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 350 to 473 amino acids in length. This domain is found associated with pfam07923.


Pssm-ID: 463384  Cd Length: 432  Bit Score: 350.85  E-value: 1.91e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  154 PRPIHESIKTLKQHKYTSIAEVQAQMEEEYLR--------------SPLSGGEEEVEQVPA---------------ETLY 204
Cdd:pfam11882   1 PASILEAGELFSKRVRMTRAMRQLWEERERFMkfergwdlddddedDDLDELTLEVDYGPRpetededvkrrldavEQFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  205 QGLLPSLPQYM-----IALLKILLAAAPTSKAKTDSINILADVLPEEMPT-TVLQSM---------KLGVDVNRHKEVIV 269
Cdd:pfam11882  81 RDALPHLQSLVivllkIILANVTALVTQSSAANGQNINFAADELPPETGLsTPGASPrgnnnnavlIEELDVLRTREITL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  270 KAISAVLLLLLKHFKLNHVYQFEYMAQHLVFANCIPLILKFF-NQNIMSYITAKN------------------------- 323
Cdd:pfam11882 161 KAVSGILLLLLKWFKLSHVLKFEYLTQLLLDSNYLPLVLKLFaNQDIQQAVTSKNdrlelsffnfcnkrsrhpppepppp 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  324 --------------------------SISVLDYPHCVVHELPEltaesleagdsNQFCWRNLFSCINLLRILNKLTKWKH 377
Cdd:pfam11882 241 npeyeesseddaapppikrrrspprpEVDELGYPTNPLPEEPI-----------TDFSWRNFFSLINYLRIMQKICKNKA 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  378 SRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWD 457
Cdd:pfam11882 310 HRNLLLVQYKSSNILKKSLKVPQPELRLYTLKLFKNQVPYCGRKWRQSNMRVITAIYLHCRPELRDDWLAGSDVDAEVEE 389

                         410       420
                  ....*....|....*....|
gi 578799991  458 FQAEECALRANIERFNARRY 477
Cdd:pfam11882 390 ALPLEQALRGLTHWYNLRRY 409
 
Name Accession Description Interval E-value
DUF3402 pfam11882
Domain of unknown function (DUF3402); This domain is functionally uncharacterized. This domain ...
 154-477 1.91e-116

Domain of unknown function (DUF3402); This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 350 to 473 amino acids in length. This domain is found associated with pfam07923.


Pssm-ID: 463384  Cd Length: 432  Bit Score: 350.85  E-value: 1.91e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  154 PRPIHESIKTLKQHKYTSIAEVQAQMEEEYLR--------------SPLSGGEEEVEQVPA---------------ETLY 204
Cdd:pfam11882   1 PASILEAGELFSKRVRMTRAMRQLWEERERFMkfergwdlddddedDDLDELTLEVDYGPRpetededvkrrldavEQFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  205 QGLLPSLPQYM-----IALLKILLAAAPTSKAKTDSINILADVLPEEMPT-TVLQSM---------KLGVDVNRHKEVIV 269
Cdd:pfam11882  81 RDALPHLQSLVivllkIILANVTALVTQSSAANGQNINFAADELPPETGLsTPGASPrgnnnnavlIEELDVLRTREITL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  270 KAISAVLLLLLKHFKLNHVYQFEYMAQHLVFANCIPLILKFF-NQNIMSYITAKN------------------------- 323
Cdd:pfam11882 161 KAVSGILLLLLKWFKLSHVLKFEYLTQLLLDSNYLPLVLKLFaNQDIQQAVTSKNdrlelsffnfcnkrsrhpppepppp 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  324 --------------------------SISVLDYPHCVVHELPEltaesleagdsNQFCWRNLFSCINLLRILNKLTKWKH 377
Cdd:pfam11882 241 npeyeesseddaapppikrrrspprpEVDELGYPTNPLPEEPI-----------TDFSWRNFFSLINYLRIMQKICKNKA 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578799991  378 SRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWD 457
Cdd:pfam11882 310 HRNLLLVQYKSSNILKKSLKVPQPELRLYTLKLFKNQVPYCGRKWRQSNMRVITAIYLHCRPELRDDWLAGSDVDAEVEE 389

                         410       420
                  ....*....|....*....|
gi 578799991  458 FQAEECALRANIERFNARRY 477
Cdd:pfam11882 390 ALPLEQALRGLTHWYNLRRY 409
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH