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Conserved domains on  [gi|568926289|ref|XP_006537785|]
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anion exchange transporter isoform X1 [Mus musculus]

Protein Classification

SLC26A/SulP family transporter( domain architecture ID 1000281)

SLC26A/SulP family transporter may be an inorganic anion uptake transporter or an anion:anion exchange transporter, similar to human anion exchange transporter that acts as a sodium-independent DIDS-sensitive anion exchanger mediating bicarbonate, chloride, sulfate and oxalate transport

Gene Ontology:  GO:0008509|GO:0015698
PubMed:  12759755|23506885
SCOP:  4006096
TCDB:  2.A.53

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11660 super family cl46980
putative transporter; Provisional
33-673 9.36e-95

putative transporter; Provisional


The actual alignment was detected with superfamily member TIGR00815:

Pssm-ID: 481320 [Multi-domain]  Cd Length: 552  Bit Score: 303.87  E-value: 9.36e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289   33 PILEWAPQYNLKEnLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISA 112
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  113 NAVERLvpqssrnlttqsnssvlGLSEFELQRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVT 192
Cdd:TIGR00815  80 SLVQRE-----------------GLQGLFDDYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVLVGFTAGAAITIGL 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  193 SQVKYLLGIKMPYISGPLGFFY-IYAYVFENiksvQLEALLFSLLSIIVLVLVKELNEQFKRKIKVVLPVDLVLIIAASF 271
Cdd:TIGR00815 143 SQLKGLLGLSIFVKTDILGVVIsTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWAPAPAPLLVVVLATL 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  272 ACYCTNMENtYGLEVVGHIPNGIP--PPRAPPMNILSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGL 349
Cdd:TIGR00815 219 IVTIGLHDS-QGVSIVGHIPQGLSffPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGYEIDANKELVALGI 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  350 SNVIPSFLFCIPSAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGmLIQFRDLKK 429
Cdd:TIGR00815 298 ANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISAAVG-LIDIRELYL 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  430 YWNVDKIDWGIWISTYIFTICFAANVGLLFGVICTIAIVLGRFPRAKTLSITDMKEmelkvkTEMHDSTENWPpskrtNV 509
Cdd:TIGR00815 377 LWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPG------TEDYENIEQYP-----KA 445
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  510 KVFPGslktgsnirslsvtprrmetsqqIKIISINNPLVFLNAKKFSADLMKIILKESDSNQplddvskceqntllssls 589
Cdd:TIGR00815 446 QTPPG-----------------------ILIFRVDGPLYFANAEDLKERLLKWLETLELDPQ------------------ 484
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  590 ngncneeasqpcssekcSLVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLD-TEKPIFFD 668
Cdd:TIGR00815 485 -----------------IIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVElIGEEHFFP 547

                  ....*
gi 568926289  669 SVPAA 673
Cdd:TIGR00815 548 SVHDA 552
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
33-673 9.36e-95

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 303.87  E-value: 9.36e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289   33 PILEWAPQYNLKEnLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISA 112
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  113 NAVERLvpqssrnlttqsnssvlGLSEFELQRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVT 192
Cdd:TIGR00815  80 SLVQRE-----------------GLQGLFDDYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVLVGFTAGAAITIGL 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  193 SQVKYLLGIKMPYISGPLGFFY-IYAYVFENiksvQLEALLFSLLSIIVLVLVKELNEQFKRKIKVVLPVDLVLIIAASF 271
Cdd:TIGR00815 143 SQLKGLLGLSIFVKTDILGVVIsTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWAPAPAPLLVVVLATL 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  272 ACYCTNMENtYGLEVVGHIPNGIP--PPRAPPMNILSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGL 349
Cdd:TIGR00815 219 IVTIGLHDS-QGVSIVGHIPQGLSffPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGYEIDANKELVALGI 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  350 SNVIPSFLFCIPSAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGmLIQFRDLKK 429
Cdd:TIGR00815 298 ANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISAAVG-LIDIRELYL 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  430 YWNVDKIDWGIWISTYIFTICFAANVGLLFGVICTIAIVLGRFPRAKTLSITDMKEmelkvkTEMHDSTENWPpskrtNV 509
Cdd:TIGR00815 377 LWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPG------TEDYENIEQYP-----KA 445
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  510 KVFPGslktgsnirslsvtprrmetsqqIKIISINNPLVFLNAKKFSADLMKIILKESDSNQplddvskceqntllssls 589
Cdd:TIGR00815 446 QTPPG-----------------------ILIFRVDGPLYFANAEDLKERLLKWLETLELDPQ------------------ 484
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  590 ngncneeasqpcssekcSLVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLD-TEKPIFFD 668
Cdd:TIGR00815 485 -----------------IIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVElIGEEHFFP 547

                  ....*
gi 568926289  669 SVPAA 673
Cdd:TIGR00815 548 SVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
47-444 8.15e-93

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 293.00  E-value: 8.15e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289   47 LLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISANAVERLVPQSSRNl 126
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAKDPEL- 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  127 ttqsnssvlglsefelqRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGIkmPYI 206
Cdd:pfam00916  80 -----------------GIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILLSQLKVLLGL--TNF 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  207 SGPLGFFYIYAYVFENIKSVQLEALLFSLLSIIVLVLVKELNEQFKRKIKVVLPVDLVLIIAASFACYCTNMENTYGLEV 286
Cdd:pfam00916 141 SGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLVSAIFDLLRRYGVKI 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  287 VGHIPNGIPPPRAPPM--NILSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGLSNVIPSFLFCIPSAA 364
Cdd:pfam00916 221 VGEIPSGLPPFSLPKFswSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFANILSGLFGGYPATG 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  365 AMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGmLIQFRDLKKYWNVDKIDWGIWIST 444
Cdd:pfam00916 301 AFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELKHLWRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
44-679 3.89e-79

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 261.97  E-value: 3.89e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  44 KENLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISANAVErlvpqss 123
Cdd:COG0659    4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAVA------- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 124 rnlttqsnssvlglsefELQRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGIKM 203
Cdd:COG0659   77 -----------------PLGSLALLLAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAILIILGQLPHLLGLPA 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 204 PyisgPLGFFYIYAYVFENIKSVQLEALLFSLLSIIVLVLVkelneqfkRKIKVVLPVDLVLIIAASFACYCTNMEntyg 283
Cdd:COG0659  140 P----GGSFLEKLAALLAALGEINPPTLALGLLTLAILLLL--------PRLLKRIPGPLVAVVLGTLLVWLLGLD---- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 284 LEVVGHIPNGIPPPRAPPMNI--LSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGLSNVIPSFLFCIP 361
Cdd:COG0659  204 VATVGEIPSGLPSFSLPDFSLetLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQGLANIASGLFGGLP 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 362 SAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASI-IVVGLKgmLIQFRDLKKYWNVDKIDWGI 440
Cdd:COG0659  284 VTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALAAIlIVVGIG--LIDWRSFRRLWRAPRSDFLV 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 441 WISTYIFTICFAANVGLLFGVICTIAIVLGRfpraktlsITDMKEMELKVKTEMHDSTENWPpskrtnvkvfpgslktgs 520
Cdd:COG0659  362 MLVTFLVTVFTDLLIGVLVGVLLSLLLFLRR--------VSRPHVVVLRVPGTHFRNVERHP------------------ 415
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 521 nirslsvtprRMETSQQIKIISINNPLVFLNAKKFSADLMKIilkesdsNQPLDDVskceqntllsslsngncneeasqp 600
Cdd:COG0659  416 ----------EAETGPGVLVYRLDGPLFFGNAERLKERLDAL-------APDPRVV------------------------ 454
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 601 cssekcslVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLDTEKPI-FFDSVPAAISIIQS 679
Cdd:COG0659  455 --------ILDLSAVPFIDATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELGEErVFPDLDEALEAAEE 526
PRK11660 PRK11660
putative transporter; Provisional
37-415 3.76e-21

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 97.71  E-value: 3.76e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  37 WAPQYNLKEnLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLIsanave 116
Cdd:PRK11660  20 WKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVI------ 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 117 rLVPQSSRnlttqsnssvLGLSefelqriGVAAAvSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVTSQVK 196
Cdd:PRK11660  93 -LYPVSQQ----------FGLA-------GLLVA-TLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIK 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 197 YLLGIKMPyiSGPLGFFYIYAYVFENIKSVQLEALLFSLLSIIVLVlvkelneqFKRKIKVVLPVDLVLIIAASFACYct 276
Cdd:PRK11660 154 DFFGLQMA--HVPEHYLEKVGALFQALPTINWGDALIGIVTLGVLI--------LWPRLKIRLPGHLPALLAGTAVMG-- 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 277 nMENTYGLEVV------------GHIPNGIPP-------------PRAPPMNI----LSAVLTEAFGVALVGYVASLALA 327
Cdd:PRK11660 222 -VLNLLGGHVAtigsrfhyvladGSQGNGIPPllpqfvlpwnlpgADGQPFTLswdlIRALLPAAFSMAMLGAIESLLCA 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 328 ---QG-SAKKFkysvDDNQEFLAHGLSNVIPSFLFCIPSAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYW 403
Cdd:PRK11660 301 vvlDGmTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSY 376
                        410
                 ....*....|..
gi 568926289 404 LPMCVLASIIVV 415
Cdd:PRK11660 377 LPLSAMAALLLM 388
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
533-668 2.99e-11

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 60.72  E-value: 2.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 533 ETSQQIKIISINNPLVFLNAKKFSADLMKIIlkesDSNQPLDDVskceqntllsslsngncneeasqpcssekcslVLNC 612
Cdd:cd07042    5 EEPPGVLIYRIDGPLFFGNAEYFKDRLLRLV----DEDPPLKVV--------------------------------ILDL 48
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 568926289 613 SGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLDTEKPIFFD 668
Cdd:cd07042   49 SAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDEIGEENFF 104
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
33-673 9.36e-95

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 303.87  E-value: 9.36e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289   33 PILEWAPQYNLKEnLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISA 112
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  113 NAVERLvpqssrnlttqsnssvlGLSEFELQRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVT 192
Cdd:TIGR00815  80 SLVQRE-----------------GLQGLFDDYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSHAVLVGFTAGAAITIGL 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  193 SQVKYLLGIKMPYISGPLGFFY-IYAYVFENiksvQLEALLFSLLSIIVLVLVKELNEQFKRKIKVVLPVDLVLIIAASF 271
Cdd:TIGR00815 143 SQLKGLLGLSIFVKTDILGVVIsTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLLWAPAPAPLLVVVLATL 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  272 ACYCTNMENtYGLEVVGHIPNGIP--PPRAPPMNILSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGL 349
Cdd:TIGR00815 219 IVTIGLHDS-QGVSIVGHIPQGLSffPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAMTGYEIDANKELVALGI 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  350 SNVIPSFLFCIPSAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGmLIQFRDLKK 429
Cdd:TIGR00815 298 ANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAIIISAAVG-LIDIRELYL 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  430 YWNVDKIDWGIWISTYIFTICFAANVGLLFGVICTIAIVLGRFPRAKTLSITDMKEmelkvkTEMHDSTENWPpskrtNV 509
Cdd:TIGR00815 377 LWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPG------TEDYENIEQYP-----KA 445
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  510 KVFPGslktgsnirslsvtprrmetsqqIKIISINNPLVFLNAKKFSADLMKIILKESDSNQplddvskceqntllssls 589
Cdd:TIGR00815 446 QTPPG-----------------------ILIFRVDGPLYFANAEDLKERLLKWLETLELDPQ------------------ 484
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  590 ngncneeasqpcssekcSLVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLD-TEKPIFFD 668
Cdd:TIGR00815 485 -----------------IIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVElIGEEHFFP 547

                  ....*
gi 568926289  669 SVPAA 673
Cdd:TIGR00815 548 SVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
47-444 8.15e-93

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 293.00  E-value: 8.15e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289   47 LLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISANAVERLVPQSSRNl 126
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAKDPEL- 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  127 ttqsnssvlglsefelqRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGIkmPYI 206
Cdd:pfam00916  80 -----------------GIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVILLSQLKVLLGL--TNF 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  207 SGPLGFFYIYAYVFENIKSVQLEALLFSLLSIIVLVLVKELNEQFKRKIKVVLPVDLVLIIAASFACYCTNMENTYGLEV 286
Cdd:pfam00916 141 SGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLATLVSAIFDLLRRYGVKI 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  287 VGHIPNGIPPPRAPPM--NILSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGLSNVIPSFLFCIPSAA 364
Cdd:pfam00916 221 VGEIPSGLPPFSLPKFswSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALGFANILSGLFGGYPATG 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  365 AMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGmLIQFRDLKKYWNVDKIDWGIWIST 444
Cdd:pfam00916 301 AFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELKHLWRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
44-679 3.89e-79

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 261.97  E-value: 3.89e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  44 KENLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISANAVErlvpqss 123
Cdd:COG0659    4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAVA------- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 124 rnlttqsnssvlglsefELQRIGVAAAVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGIKM 203
Cdd:COG0659   77 -----------------PLGSLALLLAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIAILIILGQLPHLLGLPA 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 204 PyisgPLGFFYIYAYVFENIKSVQLEALLFSLLSIIVLVLVkelneqfkRKIKVVLPVDLVLIIAASFACYCTNMEntyg 283
Cdd:COG0659  140 P----GGSFLEKLAALLAALGEINPPTLALGLLTLAILLLL--------PRLLKRIPGPLVAVVLGTLLVWLLGLD---- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 284 LEVVGHIPNGIPPPRAPPMNI--LSAVLTEAFGVALVGYVASLALAQGSAKKFKYSVDDNQEFLAHGLSNVIPSFLFCIP 361
Cdd:COG0659  204 VATVGEIPSGLPSFSLPDFSLetLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELIAQGLANIASGLFGGLP 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 362 SAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYWLPMCVLASI-IVVGLKgmLIQFRDLKKYWNVDKIDWGI 440
Cdd:COG0659  284 VTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALAAIlIVVGIG--LIDWRSFRRLWRAPRSDFLV 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 441 WISTYIFTICFAANVGLLFGVICTIAIVLGRfpraktlsITDMKEMELKVKTEMHDSTENWPpskrtnvkvfpgslktgs 520
Cdd:COG0659  362 MLVTFLVTVFTDLLIGVLVGVLLSLLLFLRR--------VSRPHVVVLRVPGTHFRNVERHP------------------ 415
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 521 nirslsvtprRMETSQQIKIISINNPLVFLNAKKFSADLMKIilkesdsNQPLDDVskceqntllsslsngncneeasqp 600
Cdd:COG0659  416 ----------EAETGPGVLVYRLDGPLFFGNAERLKERLDAL-------APDPRVV------------------------ 454
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 601 cssekcslVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLDTEKPI-FFDSVPAAISIIQS 679
Cdd:COG0659  455 --------ILDLSAVPFIDATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLLDELGEErVFPDLDEALEAAEE 526
PRK11660 PRK11660
putative transporter; Provisional
37-415 3.76e-21

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 97.71  E-value: 3.76e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  37 WAPQYNLKEnLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLIsanave 116
Cdd:PRK11660  20 WKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVI------ 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 117 rLVPQSSRnlttqsnssvLGLSefelqriGVAAAvSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTTGAATHVVTSQVK 196
Cdd:PRK11660  93 -LYPVSQQ----------FGLA-------GLLVA-TLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIK 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 197 YLLGIKMPyiSGPLGFFYIYAYVFENIKSVQLEALLFSLLSIIVLVlvkelneqFKRKIKVVLPVDLVLIIAASFACYct 276
Cdd:PRK11660 154 DFFGLQMA--HVPEHYLEKVGALFQALPTINWGDALIGIVTLGVLI--------LWPRLKIRLPGHLPALLAGTAVMG-- 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 277 nMENTYGLEVV------------GHIPNGIPP-------------PRAPPMNI----LSAVLTEAFGVALVGYVASLALA 327
Cdd:PRK11660 222 -VLNLLGGHVAtigsrfhyvladGSQGNGIPPllpqfvlpwnlpgADGQPFTLswdlIRALLPAAFSMAMLGAIESLLCA 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 328 ---QG-SAKKFkysvDDNQEFLAHGLSNVIPSFLFCIPSAAAMGRTAGLYSTGAKTQVACLISCIFVLIVIYAIGPLLYW 403
Cdd:PRK11660 301 vvlDGmTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSY 376
                        410
                 ....*....|..
gi 568926289 404 LPMCVLASIIVV 415
Cdd:PRK11660 377 LPLSAMAALLLM 388
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
533-668 2.99e-11

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 60.72  E-value: 2.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289 533 ETSQQIKIISINNPLVFLNAKKFSADLMKIIlkesDSNQPLDDVskceqntllsslsngncneeasqpcssekcslVLNC 612
Cdd:cd07042    5 EEPPGVLIYRIDGPLFFGNAEYFKDRLLRLV----DEDPPLKVV--------------------------------ILDL 48
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 568926289 613 SGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLDTEKPIFFD 668
Cdd:cd07042   49 SAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDEIGEENFF 104
STAS pfam01740
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
532-673 3.35e-09

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 426404 [Multi-domain]  Cd Length: 106  Bit Score: 54.54  E-value: 3.35e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  532 METSQQIKIISINNPLVFLNAKKFSADLMKIILKESDSNqplddvskceqntllsslsngncneeasqpcssekcsLVLN 611
Cdd:pfam01740   4 AEEIPGILILRLDGPLDFANAESLRERLLRALEEGEIKH-------------------------------------VVLD 46
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568926289  612 CSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMTYYGDLDTEKpiFFDSVPAA 673
Cdd:pfam01740  47 LSAVPFIDSSGLGALEELYKELRRRGVELVLVGPSPEVARTLEKTGLDDIIK--IFPTVAEA 106
STAS_anti-anti-sigma_factors cd07043
Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key ...
608-654 1.77e-03

Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.


Pssm-ID: 132914 [Multi-domain]  Cd Length: 99  Bit Score: 38.27  E-value: 1.77e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 568926289 608 LVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMT 654
Cdd:cd07043   41 LVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVNVSPAVRRVLE 87
ant_ant_sig TIGR00377
anti-anti-sigma factor; This superfamily includes small (105-125 residue) proteins related to ...
608-659 4.15e-03

anti-anti-sigma factor; This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins. [Regulatory functions, Protein interactions]


Pssm-ID: 273042 [Multi-domain]  Cd Length: 108  Bit Score: 37.58  E-value: 4.15e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 568926289  608 LVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIK--AMTYYGDL 659
Cdd:TIGR00377  46 IVLDLEDLEFMDSSGLGVLLGRYKQVRRVGGQLVLVSVSPRVARllDITGLLRI 99
CodB COG1457
Purine-cytosine permease or related protein [Nucleotide transport and metabolism];
51-184 5.79e-03

Purine-cytosine permease or related protein [Nucleotide transport and metabolism];


Pssm-ID: 441066 [Multi-domain]  Cd Length: 448  Bit Score: 39.85  E-value: 5.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568926289  51 TVSGIMLAVQQVAQGLSFAMLSsvHPVFGLYGSLFPAIIYAIFGMgrhvatGTFALTSLISANAVERLVPQSSRNLttqs 130
Cdd:COG1457   75 FLLGALIAYIGARTGLPTMLLS--RAAFGYRGSTLPSLLNALTTI------GWFAVEAAIAAQALAALLGGLGIPL---- 142
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 568926289 131 nssVLGLSEFELQRIGVAA----AVSFLGGVIQLVMFVLQLGSATFLLTEPVISAMTT 184
Cdd:COG1457  143 ---VLAYLIVGLLVILLAIfgyrAISRLQRWAVPLLLVLFVLLVVLALSHPGLSALLA 197
SpoIIAA COG1366
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction ...
608-654 5.81e-03

Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms];


Pssm-ID: 440977 [Multi-domain]  Cd Length: 93  Bit Score: 36.76  E-value: 5.81e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 568926289 608 LVLNCSGLTFFDYTGVSTLVELYLDCKSRSVDVFLANCTASLIKAMT 654
Cdd:COG1366   42 VVLDLSGVTFIDSSGLGALLSLAKAARLLGGRLVLVGVSPAVARVLE 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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