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Conserved domains on  [gi|568935248|ref|XP_006534817|]
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beta-crystallin B1 isoform X1 [Mus musculus]

Protein Classification

beta/gamma crystallin family protein( domain architecture ID 10440390)

beta/gamma crystallin family protein such as beta- and gamma-crystallins, which are structural components of the vertebrate eye lens

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
166-248 2.55e-36

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


:

Pssm-ID: 459639  Cd Length: 82  Bit Score: 124.14  E-value: 2.55e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248  166 KICLFEGANFKGNTMEIqEDDVPSLWVYGFCDRVGSITVSGGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQAV 245
Cdd:pfam00030   1 KIVLYEKENFQGRSIEL-TDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSL 79

                  ...
gi 568935248  246 RRL 248
Cdd:pfam00030  80 RPI 82
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
76-158 7.28e-35

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


:

Pssm-ID: 459639  Cd Length: 82  Bit Score: 120.29  E-value: 7.28e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248   76 RLIVFEQENFQGRRVEFSGECLNLGDRGF-DRVRSLIVVSGPWVAFEQSAFRGEMFVLEKGEYPRWDTWtsSYRSDRLMS 154
Cdd:pfam00030   1 KIVLYEKENFQGRSIELTDDCPSLQERGFnSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDW--GAPNDRIGS 78

                  ....
gi 568935248  155 FRPI 158
Cdd:pfam00030  79 LRPI 82
 
Name Accession Description Interval E-value
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
166-248 2.55e-36

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 459639  Cd Length: 82  Bit Score: 124.14  E-value: 2.55e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248  166 KICLFEGANFKGNTMEIqEDDVPSLWVYGFCDRVGSITVSGGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQAV 245
Cdd:pfam00030   1 KIVLYEKENFQGRSIEL-TDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSL 79

                  ...
gi 568935248  246 RRL 248
Cdd:pfam00030  80 RPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
166-248 4.39e-35

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 120.69  E-value: 4.39e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248   166 KICLFEGANFKGNTMEIqEDDVPSLWVYGFCDRVGSITVSGGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQAV 245
Cdd:smart00247   1 KITLYEDENFQGRSYEL-SDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSI 79

                   ...
gi 568935248   246 RRL 248
Cdd:smart00247  80 RRI 82
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
76-158 7.28e-35

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 459639  Cd Length: 82  Bit Score: 120.29  E-value: 7.28e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248   76 RLIVFEQENFQGRRVEFSGECLNLGDRGF-DRVRSLIVVSGPWVAFEQSAFRGEMFVLEKGEYPRWDTWtsSYRSDRLMS 154
Cdd:pfam00030   1 KIVLYEKENFQGRSIELTDDCPSLQERGFnSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDW--GAPNDRIGS 78

                  ....
gi 568935248  155 FRPI 158
Cdd:pfam00030  79 LRPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
76-158 2.98e-31

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 111.06  E-value: 2.98e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248    76 RLIVFEQENFQGRRVEFSGECLNLGDRGF-DRVRSLIVVSGPWVAFEQSAFRGEMFVLEKGEYPRWDTWTSSyrSDRLMS 154
Cdd:smart00247   1 KITLYEDENFQGRSYELSDDCPSLQDYGSrDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGF--NDQISS 78

                   ....
gi 568935248   155 FRPI 158
Cdd:smart00247  79 IRRI 82
 
Name Accession Description Interval E-value
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
166-248 2.55e-36

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 459639  Cd Length: 82  Bit Score: 124.14  E-value: 2.55e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248  166 KICLFEGANFKGNTMEIqEDDVPSLWVYGFCDRVGSITVSGGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQAV 245
Cdd:pfam00030   1 KIVLYEKENFQGRSIEL-TDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSL 79

                  ...
gi 568935248  246 RRL 248
Cdd:pfam00030  80 RPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
166-248 4.39e-35

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 120.69  E-value: 4.39e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248   166 KICLFEGANFKGNTMEIqEDDVPSLWVYGFCDRVGSITVSGGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQAV 245
Cdd:smart00247   1 KITLYEDENFQGRSYEL-SDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSI 79

                   ...
gi 568935248   246 RRL 248
Cdd:smart00247  80 RRI 82
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
76-158 7.28e-35

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 459639  Cd Length: 82  Bit Score: 120.29  E-value: 7.28e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248   76 RLIVFEQENFQGRRVEFSGECLNLGDRGF-DRVRSLIVVSGPWVAFEQSAFRGEMFVLEKGEYPRWDTWtsSYRSDRLMS 154
Cdd:pfam00030   1 KIVLYEKENFQGRSIELTDDCPSLQERGFnSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDW--GAPNDRIGS 78

                  ....
gi 568935248  155 FRPI 158
Cdd:pfam00030  79 LRPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
76-158 2.98e-31

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 111.06  E-value: 2.98e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935248    76 RLIVFEQENFQGRRVEFSGECLNLGDRGF-DRVRSLIVVSGPWVAFEQSAFRGEMFVLEKGEYPRWDTWTSSyrSDRLMS 154
Cdd:smart00247   1 KITLYEDENFQGRSYELSDDCPSLQDYGSrDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGF--NDQISS 78

                   ....
gi 568935248   155 FRPI 158
Cdd:smart00247  79 IRRI 82
Inhibitor_I36 pfam03995
Peptidase inhibitor family I36; This domain is currently only found in a small set of S. ...
165-220 2.23e-03

Peptidase inhibitor family I36; This domain is currently only found in a small set of S. coelicolor secreted proteins. There are four conserved cysteines that probably form two disulphide bonds. Proteins 2SCK31.15C and SCO3675 also have probable beta-propellers at their C-termini. This family includes Swiss:P01077 a known peptidase inhibitor of known structure. This protein has a crystallin like fold pfam00030 and is distantly related by sequence. It is not known whether other members of this family are peptidase inhibitors.


Pssm-ID: 427638  Cd Length: 69  Bit Score: 35.82  E-value: 2.23e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 568935248  165 HKICLFEGANFKGNTMEIQEDDVPSLWvyGFCDRVGSITVSGGTWV-GYQYPGYRGY 220
Cdd:pfam03995  11 GYFCLWSGANGTGRMAELSGSDALVGA--GMNDKARSVWNRTGSWVtVYTDANYGGR 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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