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Conserved domains on  [gi|568972542|ref|XP_006532713|]
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organic cation/carnitine transporter 2 isoform X1 [Mus musculus]

Protein Classification

MFS transporter( domain architecture ID 11489935)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
12-492 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 545.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542   12 GEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVPHTVNLSSAWRNHSIPLETKDGRqvPQKCRRYRLATIAN 91
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRCELNLTLPRLPDGR--PESCLRFMVDQWAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542   92 FSELGLEPGRDVDLEQLEQESCLDGWEYDKDVFLSTIVTEvWSQECAvfDHGHADWLQ--------LPAGLLCELRDVY- 162
Cdd:TIGR00898  79 PSLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTE-WDLVCE--DAWKVDLTQscffvgvlLGSFVFGYLSDRFg 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  163 ------------------SAFCPCWHgSDLQLR---GSICPGYGHQ--VGGTEILSKSIRIIFATLGvCIFYAFGFMVLP 219
Cdd:TIGR00898 156 rkkvlllstlvtavsgvlTAFSPNYT-VFLVFRllvGMGIGGIWVQavVLNTEFLPKKQRAIVGTLI-QVFFSLGLVLLP 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  220 LFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKINGIVAPSTIFDPSELQDLNSTKPQ 299
Cdd:TIGR00898 234 LVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQ 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  300 lHHIYDLIRTRNIRVITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAAL 379
Cdd:TIGR00898 314 -YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASL 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  380 FLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYD 459
Cdd:TIGR00898 393 LLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKW 472
                         490       500       510
                  ....*....|....*....|....*....|...
gi 568972542  460 RFLPYILMGSLTILTAILTLFFPESFGVPLPDT 492
Cdd:TIGR00898 473 LFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
 
Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
12-492 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 545.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542   12 GEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVPHTVNLSSAWRNHSIPLETKDGRqvPQKCRRYRLATIAN 91
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRCELNLTLPRLPDGR--PESCLRFMVDQWAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542   92 FSELGLEPGRDVDLEQLEQESCLDGWEYDKDVFLSTIVTEvWSQECAvfDHGHADWLQ--------LPAGLLCELRDVY- 162
Cdd:TIGR00898  79 PSLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTE-WDLVCE--DAWKVDLTQscffvgvlLGSFVFGYLSDRFg 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  163 ------------------SAFCPCWHgSDLQLR---GSICPGYGHQ--VGGTEILSKSIRIIFATLGvCIFYAFGFMVLP 219
Cdd:TIGR00898 156 rkkvlllstlvtavsgvlTAFSPNYT-VFLVFRllvGMGIGGIWVQavVLNTEFLPKKQRAIVGTLI-QVFFSLGLVLLP 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  220 LFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKINGIVAPSTIFDPSELQDLNSTKPQ 299
Cdd:TIGR00898 234 LVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQ 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  300 lHHIYDLIRTRNIRVITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAAL 379
Cdd:TIGR00898 314 -YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASL 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  380 FLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYD 459
Cdd:TIGR00898 393 LLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKW 472
                         490       500       510
                  ....*....|....*....|....*....|...
gi 568972542  460 RFLPYILMGSLTILTAILTLFFPESFGVPLPDT 492
Cdd:TIGR00898 473 LFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
107-482 1.04e-134

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 394.14  E-value: 1.04e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 107 QLEQESCLDGWEYDKDVFLSTIVTEvWSQECavfdhgHADWlQLP-------AGLLC------ELRDVY----------- 162
Cdd:cd17376    2 QIEQEPCLDGWEYSQDVYLSTIVTE-WNLVC------EDDW-KVPlttslffVGVLLgsfisgQLSDRFgrkkvlfatma 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 163 --------SAFCPCWHGSDLQL----RGSICPGYGHQVGGTEILSKSIRIIFATLGVCIFYAFGFMVLPLFAYFIRDWRM 230
Cdd:cd17376   74 vqtgfsflQIFSPSWEMFTVLFvivgMGQISNYVVAFVLGTEILGKSVRILFSTLGVCIFYAIGYMLLPLFAYFIRDWRM 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 231 LLLALTVPGVLCGALWWFIPesprwlisqgrikeaeviirkaakingivapstifdpselqdlnstkpqlhhiydlirtr 310
Cdd:cd17376  154 LLLALTLPGVLCVPLWWFIP------------------------------------------------------------ 173
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 311 nirVITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQ 390
Cdd:cd17376  174 ---ITTIMSLLLWMAISVGYFGLSLNTPNLHGDPYLNCFLSAVIEVPAYIIAWLLLRSLPRRYSIAATLVLGGGVLLFIQ 250
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 391 LVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSL 470
Cdd:cd17376  251 LVPTDLQVLATALVMLGKFGITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYFVYLGAYDRYLPYILMGSL 330
                        410
                 ....*....|..
gi 568972542 471 TILTAILTLFFP 482
Cdd:cd17376  331 TVLIGILTLFLP 342
Sugar_tr pfam00083
Sugar (and other) transporter;
192-497 6.98e-16

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 80.01  E-value: 6.98e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  192 EILSKSIRiifATLGVC--IFYAFGFMVLPLFAYFIRD------WRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIK 263
Cdd:pfam00083 129 EIAPKKLR---GALGSLyqLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLE 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  264 EAEviiRKAAKINGIVAPSTIFDPSELQDLNSTKPQLHHIYDLIRTRNIRVITIMSIILWLTI------SVGYFGLSL-D 336
Cdd:pfam00083 206 EAR---EVLAKLRGVPDVDRELDEIKDSLEAGQEAEKASWKELFSTKTRRQRLLIGVMLQIFQqltginAIFYYSTTIfE 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  337 TPNLHGDIYVNcFLLAAVEVPAYVLAWLLLQYLPRRYsisaALFLGGSVLLFMQLVPSELFYLSTA-------------L 403
Cdd:pfam00083 283 NLGLSDSFLVT-IIVGVVNFVFTFIAIFLVDRFGRRP----LLLLGAAGMAICFVILGIVALLGVSksdwagivaivfiA 357
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  404 VMVGKFGITSAySMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYF--VYLGAYDRFLPYILMGSLTILTAILTLFF 481
Cdd:pfam00083 358 LFIAFFAMGWG-PVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLfpIITDAIGLGYTFFIFAGLLVLFIIFVFFF 436
                         330
                  ....*....|....*..
gi 568972542  482 -PESFGVPLpDTIDQML 497
Cdd:pfam00083 437 vPETKGRTL-EEIDELF 452
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
314-482 5.17e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 54.88  E-value: 5.17e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 314 VITIMSIILWL-TISVGYFGLSLDTPNLHGdiyvncFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLV 392
Cdd:COG2271  193 YFALYGFLTWLpTYLVEVRGLSLAQAGLLL------SLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLA 266
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 393 PSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV--YLGAYDRFLPYILMGSL 470
Cdd:COG2271  267 LLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVgyLLDATGYQAAFLLLAAL 346
                        170
                 ....*....|..
gi 568972542 471 TILTAILTLFFP 482
Cdd:COG2271  347 ALLAALLALLLL 358
xylE PRK10077
D-xylose transporter XylE; Provisional
213-296 1.12e-07

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 54.31  E-value: 1.12e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 213 FGFMVLPLFAYFIRD-----------WRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRkaaKINGIVAP 281
Cdd:PRK10077 167 FGQLVVYFVNYFIARsgdaswlntdgWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILR---KIMGNTLA 243
                         90
                 ....*....|....*
gi 568972542 282 STIfdpseLQDLNST 296
Cdd:PRK10077 244 TQA-----LQEIKHS 253
 
Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
12-492 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 545.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542   12 GEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVPHTVNLSSAWRNHSIPLETKDGRqvPQKCRRYRLATIAN 91
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRCELNLTLPRLPDGR--PESCLRFMVDQWAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542   92 FSELGLEPGRDVDLEQLEQESCLDGWEYDKDVFLSTIVTEvWSQECAvfDHGHADWLQ--------LPAGLLCELRDVY- 162
Cdd:TIGR00898  79 PSLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTE-WDLVCE--DAWKVDLTQscffvgvlLGSFVFGYLSDRFg 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  163 ------------------SAFCPCWHgSDLQLR---GSICPGYGHQ--VGGTEILSKSIRIIFATLGvCIFYAFGFMVLP 219
Cdd:TIGR00898 156 rkkvlllstlvtavsgvlTAFSPNYT-VFLVFRllvGMGIGGIWVQavVLNTEFLPKKQRAIVGTLI-QVFFSLGLVLLP 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  220 LFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKINGIVAPSTIFDPSELQDLNSTKPQ 299
Cdd:TIGR00898 234 LVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQ 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  300 lHHIYDLIRTRNIRVITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAAL 379
Cdd:TIGR00898 314 -YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASL 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  380 FLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYD 459
Cdd:TIGR00898 393 LLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKW 472
                         490       500       510
                  ....*....|....*....|....*....|...
gi 568972542  460 RFLPYILMGSLTILTAILTLFFPESFGVPLPDT 492
Cdd:TIGR00898 473 LFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
107-482 1.04e-134

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 394.14  E-value: 1.04e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 107 QLEQESCLDGWEYDKDVFLSTIVTEvWSQECavfdhgHADWlQLP-------AGLLC------ELRDVY----------- 162
Cdd:cd17376    2 QIEQEPCLDGWEYSQDVYLSTIVTE-WNLVC------EDDW-KVPlttslffVGVLLgsfisgQLSDRFgrkkvlfatma 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 163 --------SAFCPCWHGSDLQL----RGSICPGYGHQVGGTEILSKSIRIIFATLGVCIFYAFGFMVLPLFAYFIRDWRM 230
Cdd:cd17376   74 vqtgfsflQIFSPSWEMFTVLFvivgMGQISNYVVAFVLGTEILGKSVRILFSTLGVCIFYAIGYMLLPLFAYFIRDWRM 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 231 LLLALTVPGVLCGALWWFIPesprwlisqgrikeaeviirkaakingivapstifdpselqdlnstkpqlhhiydlirtr 310
Cdd:cd17376  154 LLLALTLPGVLCVPLWWFIP------------------------------------------------------------ 173
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 311 nirVITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQ 390
Cdd:cd17376  174 ---ITTIMSLLLWMAISVGYFGLSLNTPNLHGDPYLNCFLSAVIEVPAYIIAWLLLRSLPRRYSIAATLVLGGGVLLFIQ 250
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 391 LVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSL 470
Cdd:cd17376  251 LVPTDLQVLATALVMLGKFGITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYFVYLGAYDRYLPYILMGSL 330
                        410
                 ....*....|..
gi 568972542 471 TILTAILTLFFP 482
Cdd:cd17376  331 TVLIGILTLFLP 342
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
187-482 2.40e-72

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 233.63  E-value: 2.40e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 187 QVGGTEILSKSIRIiFATLGVCIFYAFGFMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPesprwlisqgrikeae 266
Cdd:cd17317  100 FVLGMEIVGPKYRS-FVGILFGLFWALGYMLLALLAYLIRDWRWLQLAISLPGLLFLLLLWWLP---------------- 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 267 viirkaakingivapstifdpselqdlnstkpqlhhiydlirtrnirVITIMSIILWLTISVGYFGLSLDTPNLHGDIYV 346
Cdd:cd17317  163 -----------------------------------------------RRTIIVGLIWFVTSLVYYGLSLNSSNLGGNLYL 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 347 NCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELY 426
Cdd:cd17317  196 NFFLSGLVEIPAYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALLPDDENTLALTLALVGKFAISAAFSVIYLYTAELY 275
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 568972542 427 PTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17317  276 PTVVRNTGVGLCSTVARVGAILAPFIVLLGKIGPLLPLIIFGVLALLGGLLTLLLP 331
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
107-482 1.43e-50

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 176.33  E-value: 1.43e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 107 QLEQESCLDGWEYDKDVFLSTIVTEvWSQEC---------------------AVFDHGHADWLQLPAGLLCELR----DV 161
Cdd:cd17374    2 EADTEPCVDGWVYDRSKFTSTIVTE-WDLVCesqslksvaqsifmagllvgaLIFGHLSDRFGRKFILLLSLLQlaifGT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 162 YSAFCPCWHgSDLQLR---GSICPGYGHQVG--GTEILSKSIRIIFATLGVCiFYAFGFMVLPLFAYFIRDWRMLLLALT 236
Cdd:cd17374   81 CAAFAPTFP-VYCVLRflaGFAVSGISINTLilGTEWTTPRHRALAITLTSC-FFSIGQMLLAGLAYAIRDWRLLQLVVS 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 237 VPGVLCGALWWFIPesprwlisqgrikeaeviirkaakingivapstifdpselqdlnstkpqlhhiydlirtrniRVIT 316
Cdd:cd17374  159 VPFFLFFLYSWWLP--------------------------------------------------------------KRTL 176
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 317 IMSIIlWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSEL 396
Cdd:cd17374  177 ILSFV-WFANSFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQEM 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 397 FYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAI 476
Cdd:cd17374  256 QTLRTVLAVLGKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLIMLLGVYSPLLPMIIYGVLPILAGL 335

                 ....*.
gi 568972542 477 LTLFFP 482
Cdd:cd17374  336 LALLLP 341
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
108-482 1.18e-38

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 144.10  E-value: 1.18e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 108 LEQESCLDGWEYDKDVFLSTIVTEvWSQEC--------------------AVFDHGHAD-----------WLQLPAGLLC 156
Cdd:cd17446    1 LATEPCTDGWVYDKSEFPSTIITE-WDLVCnhralrqlaqsiymagvlvgAIVFGGLSDrfgrrplliwsYLQMAVSGTC 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 157 -ELRDVYSAFCPCWHGSDLQLRGSICPGYGHQVggtEILSKSIRIIFATL-GVCifYAFGFMVLPLFAYFIRDWRMLLLA 234
Cdd:cd17446   80 aAFSPSFPIYCVFRFLTGMALSGIVLNSVSLNV---EWMPTRVRAVVGTLlGYC--YTLGQLILAGVAYAIRDWRWLQLA 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 235 LTVPGVLCGALWWFIPEsprwlisqgrikeaeviirkaakingivapstifdpselqdlnstkpqlhhiydlirtrnirv 314
Cdd:cd17446  155 VSLPFFIFFLYSWWFPR--------------------------------------------------------------- 171
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 315 ITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPS 394
Cdd:cd17446  172 ITFCLSLVWFSTSFAYYGLAMDLQKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILANIFVPQ 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 395 ELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILT 474
Cdd:cd17446  252 DLQTVRTALAVFGKGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAPLVKMLGEYYPFLPLIIYGAAPILS 331

                 ....*...
gi 568972542 475 AILTLFFP 482
Cdd:cd17446  332 GIAACFLP 339
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
191-482 1.80e-38

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 143.74  E-value: 1.80e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 191 TEILSKSIRIiFATLGVCIFYAFGFMVLPLFAYFIRDWR---MLLLALTVPGVLCgalWWFIPEsprwlisqgrikeaev 267
Cdd:cd17375  114 TEFTGIKART-WASMHVHAFFAVGIMVVALVGYLVRTWWiyqIILSLVTIPFILC---CWMLPK---------------- 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 268 iirkaakingivapstifdpselqdlnstkpqlhhiydlirtrniRVITIMSIilWLTISVGYFGLSLDTPNLHGDIYVN 347
Cdd:cd17375  174 ---------------------------------------------RTITVWLI--WFTGSLGYYVFSLGSVNLGGNEYLN 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 348 CFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYP 427
Cdd:cd17375  207 LFLVGAVEIPSYIIACIGMDKLGRRNTLAPFLLLSALACMLIMVIPQDYEVLTIVLSMTGKFAIAIAFGLIYLYTAELYP 286
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 568972542 428 TVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17375  287 TIVRSLAVGSGSMMCRVGSVVAPFCVYLSDVWIFLPQLLVGIMAFLSGILTLMLP 341
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
209-482 5.72e-35

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 134.52  E-value: 5.72e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 209 IFYAFGFMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPesprwlisqGRikeaeviirkaakingivapstifdps 288
Cdd:cd17377  135 LFFAVGIAQYALLGYFIRSWRTLAVVVNLQGTLVFLLSLFIP---------GR--------------------------- 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 289 elqdlnstkpqlhhiydlirtrnirviTIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVLAWLLL-- 366
Cdd:cd17377  179 ---------------------------TLILMYVWFVCSLVYYGLTLNAGDLGGNIYLNLALSGLVELPAYPLCIYLInq 231
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 367 QYLPRRYSISAALFLGGSVLLFMQLVP----SELFYL--STALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSST 440
Cdd:cd17377  232 KWSGRRRTLAGFLFLGGIACLLVMFVPekkdSGVFAVvnSTSLSLLGKLTISAAFNIVYIYTSELYPTVVRNAGLGVCSM 311
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 568972542 441 ASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17377  312 FSRVGGIIAPFIPSLKSVQWSLPFIVFGASGLSAGLLSLLLP 353
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
202-482 3.52e-33

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 129.08  E-value: 3.52e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 202 FATLGVCIFYAFGFMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPEsprwlisqgrikeaeviirkaakingivap 281
Cdd:cd17447  124 VAGVLISLFWTVGNMLLALVAYLIRDWRWLILAVTLPCAPGIITWWWVPK------------------------------ 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 282 stifdpselqdlnstkpqlhhiydlirtrnirvITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVEVPAYVL 361
Cdd:cd17447  174 ---------------------------------ISLCTGIVWFGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLL 220
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 362 AWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTA 441
Cdd:cd17447  221 AYLLLDRIGRRLTQAGSLILTGLSIGINILIPSEFTVVRTVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFI 300
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 568972542 442 SRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17447  301 ARLGGSLAPLVILLDDVWLSLPQVIFCGVALLAGGVAFLLP 341
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
191-482 1.16e-31

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 124.77  E-value: 1.16e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 191 TEILSKSIRIIFATLgVCIFYAFGFMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPESprwlisqgrikeaeviir 270
Cdd:cd17379  112 TEFVGSKYRRTVGIV-YQMFFTLGLLILPGIAYFIPHWRWLQLAVTLPNFLFLLYYWFIPKH------------------ 172
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 271 kaakingivapstifdpselqdlnstkpqlhhiydlirtrnirviTIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFL 350
Cdd:cd17379  173 ---------------------------------------------TFILMYAWFTSAVVYQGLIMRLGITGGNLYLDFFI 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 351 LAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVV 430
Cdd:cd17379  208 SALVELPAAFIILLTIDRIGRRLPFAASNIVAGAACLITAFIPPDLHWLKTTIACVGRLGITMAFEIVCLVNTELYPTFL 287
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 568972542 431 RNMGVGVSSTASRLGSILSPYFVY-LGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17379  288 RNLGVSVCSSLCDIGGIIAPFLLYrLAEIWLELPLIVFGVLALVAGGLVLLLP 340
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
191-482 1.41e-29

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 119.00  E-value: 1.41e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 191 TEILSKSIRiifATLGVCIFYAF--GFMVLPLFAYFI-RDWRMLLLALTVPGVLCGALWWFIPEsprwlisqgrikeaev 267
Cdd:cd17378  113 TEPVGPKWR---GQVGMSTFFFFvlGFMSLPGIAYLNgSSWRVLYFWTSIPALIYCILVYLFAR---------------- 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 268 iirkaakingivapstifdpselqdlnstkpqlhhiydlirtrniRVITIMsiILWLTISVGYFGLSLDTPNLHGDIYVN 347
Cdd:cd17378  174 ---------------------------------------------RLLAVM--VIGFGIGMVYYGIPLAVGNLKFNIYLS 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 348 CFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSEL-FYLSTALVMVGKFGITSAYSMVYVYTAELY 426
Cdd:cd17378  207 VALNALSELPAFVITAFLLDRFGRRPSLLGFTLLSGASCLLCFVLSIGGtTSLQIALELVGFFGAAGAFNLLYIYTVELF 286
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 568972542 427 PTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17378  287 PTCVRNAALGMLRQALVVGGIFAPFIVSLGRKNAALSFGVFGVAILLLGLFALGLP 342
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
197-489 3.42e-17

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 84.31  E-value: 3.42e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  197 SIRIIFATLGvcIFYAFGFMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRK----A 272
Cdd:TIGR00879 166 SLYQLAITFG--ILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARlrgtS 243
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  273 AKINGIVAPSTIFDPSELQDLNSTKPQLHHIYDLIRTRNIRVITI--MSIILWLT-ISV-----GYFGLSLDTPNLHGdi 344
Cdd:TIGR00879 244 GEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGvvLQWFQQFTgINAimyysPTIFENAGVSTDHA-- 321
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  345 YVNCFLLAAVEVPAYVLAWLLLQYLPRR------YSISAALFLGGSVLLFMQLVPSELF--YLSTALVMVGKFGI-TSAY 415
Cdd:TIGR00879 322 FLVSIIVGAVNFAFTFVAIFLVDRFGRRpllligAAGMAICLFVLGILGASFVTGSSKSsgNVAIVFILLFIAFFaMGWG 401
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568972542  416 SMVYVYTAELYPTVVRNMGVGVSSTASRLGSIL-SPYFVY-LGAYDRFLPYILMGSLTILTAILTLFF-PESFGVPL 489
Cdd:TIGR00879 402 PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIvGFLFPTmLESIGVGGVFIFFGGLNVLGLIFVYFFlPETKGRTL 478
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
312-480 1.68e-16

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 81.11  E-value: 1.68e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 312 IRVITIMSIILWLTISVGYFGLSLDTPNL--------HGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGG 383
Cdd:cd17316  175 LRRRTLLLILLWFFISFGYYGLTTFLPTYlqtvlglsPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSG 254
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 384 SVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV--YLGAYDRF 461
Cdd:cd17316  255 ILALPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGAPPLIalLLASTGGT 334
                        170
                 ....*....|....*....
gi 568972542 462 LPYILMGSLTILTAILTLF 480
Cdd:cd17316  335 GVPALILALLAIVALIVAL 353
Sugar_tr pfam00083
Sugar (and other) transporter;
192-497 6.98e-16

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 80.01  E-value: 6.98e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  192 EILSKSIRiifATLGVC--IFYAFGFMVLPLFAYFIRD------WRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIK 263
Cdd:pfam00083 129 EIAPKKLR---GALGSLyqLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLE 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  264 EAEviiRKAAKINGIVAPSTIFDPSELQDLNSTKPQLHHIYDLIRTRNIRVITIMSIILWLTI------SVGYFGLSL-D 336
Cdd:pfam00083 206 EAR---EVLAKLRGVPDVDRELDEIKDSLEAGQEAEKASWKELFSTKTRRQRLLIGVMLQIFQqltginAIFYYSTTIfE 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  337 TPNLHGDIYVNcFLLAAVEVPAYVLAWLLLQYLPRRYsisaALFLGGSVLLFMQLVPSELFYLSTA-------------L 403
Cdd:pfam00083 283 NLGLSDSFLVT-IIVGVVNFVFTFIAIFLVDRFGRRP----LLLLGAAGMAICFVILGIVALLGVSksdwagivaivfiA 357
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  404 VMVGKFGITSAySMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYF--VYLGAYDRFLPYILMGSLTILTAILTLFF 481
Cdd:pfam00083 358 LFIAFFAMGWG-PVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLfpIITDAIGLGYTFFIFAGLLVLFIIFVFFF 436
                         330
                  ....*....|....*..
gi 568972542  482 -PESFGVPLpDTIDQML 497
Cdd:pfam00083 437 vPETKGRTL-EEIDELF 452
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
192-450 1.79e-13

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 72.00  E-value: 1.79e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  192 EILSKSIRIIFATLgVCIFYAFGFMVLPLFAYFI---RDWR-MLLLALTVPGVLCGALWWFIPESPRWLISQGRikeaev 267
Cdd:TIGR00895 132 EYAPKRFRGTAVGL-MFCGYPIGAAVGGFLAGWLipvFGWRsLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRP------ 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  268 iiRKAAKINGIVAPSTIFDP-SELQDLNSTKPQLHHIYDLIRTRNIRVITIMsiiLWLTIS---VGYFGLSLDTPNLH-- 341
Cdd:TIGR00895 205 --ETVRRIVNAIAPQMQAEAqSALPEQKSTQGTKRSVFKALFQGKTARITVL---LWLLYFmllVGVYFLTNWLPKLMve 279
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  342 --GDIYVNCFLLAAVEVpAYVLAWLLLQYLPRRY--SISAALFLGGSVLLFmqLVPSELFYLSTALVMVGKFGI--TSAY 415
Cdd:TIGR00895 280 lgFSLSLAATGGALFNF-GGVIGSIIFGWLADRLgpRVTALLLLLGAVFAV--LVGSTLFSPTLLLLLGAIAGFfvNGGQ 356
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 568972542  416 SMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSP 450
Cdd:TIGR00895 357 SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGP 391
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
191-483 2.36e-10

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 62.66  E-value: 2.36e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 191 TEILSKSIRIIFATLgVCIFYAFGFMVLPLFAY-FI----RDWRMLLLALTVPGVLCGALWWFIPESPRWL-ISQGRIKE 264
Cdd:cd17357  131 QEISPSELRGALGSL-TQIGVTLGILLGQVFGLpSVlgteTLWPYLLFFPGIPALLQLAALPFFPESPKFLlISKGDEEE 209
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 265 AEVIIRKAAKINGIVAPStiFDPSELQDLNSTKPQLHHIYDLIRTRNIRVITIMSIILWLTI-----------SVGYF-- 331
Cdd:cd17357  210 AEKSLKFLRGIEDDVDQE--LEEIKKESEQMGDQKQVSLMQLLRDPSLRLPLLLVLVVSASQqfsginaiffySTFIFen 287
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 332 -GLSLDTPnlhgdIYVNcFLLAAVEVPAYVLAWLLLQYLPRR-------YSISAALFLgGSVLLFMQLVPSELFYLSTAL 403
Cdd:cd17357  288 aGFSPQLA-----EWAN-LGIGIVNVLSTIVGPFLIEKVGRRplllislSVCAVALLL-MSVFLFLSEQNSWMSYGCIVA 360
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 404 VMVgkFGITsaYSMV-----YVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVY----LGAYDRFLPYILmgsLTILT 474
Cdd:cd17357  361 IFL--FIFF--FAIGlgpipWFIGAELFPQAPRSAAQSLGSSVNWTSNFIVGMAFPplqsIGGGFVFIIFAI---PCALF 433
                        330
                 ....*....|
gi 568972542 475 AILTLFF-PE 483
Cdd:cd17357  434 LLYLYRYlPE 443
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
345-481 1.58e-09

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 59.86  E-value: 1.58e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 345 YVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSElfYLSTALVMVGKFGITSAYSMVYVYTAE 424
Cdd:cd17372  232 YRDVFIATFAEFPGLLISAAMIDRLGRKASMASMLFTCCIFLLLLLICQSP--FILTVLLFGGRACISAAFTVVYIYTPE 309
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 568972542 425 LYPTVVRNMGVGVSSTASRLGSILSPYF-VYLGAYDRFLPYILMGSLTILTAILTLFF 481
Cdd:cd17372  310 VYPTAVRALGVGTGSSVGRIGAILCPFIaQVLVHGSQTIALLLFSVVCLVSAICVCLL 367
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
191-483 2.07e-09

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 59.51  E-value: 2.07e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 191 TEILSKSIRiifATLGVCI--FYAFGFMVLPLFAYFIRdWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVI 268
Cdd:cd17358  120 AEIAPKNVR---GALGSLNqlLVNIGILLGYVLGSFLP-WRTLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKS 195
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 269 IRKAAKINGIVAPSTIFDPSELQDLNSTKPQLhHIYDLIRTRNIRVITIMSIILWLTISVGYFGLS------LDTPNLHG 342
Cdd:cd17358  196 LQFLRGKDADISKEAAEIQEELAELEKEAKES-SFSDLFQRKYLKPLVIGLGLMLFQQLSGINAVIfyassiFDEAGSGL 274
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 343 DIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYS--ISAA------LFLGGSVLLFMQLVPSELF-YLSTALVMVGKFGITS 413
Cdd:cd17358  275 DPNTATIIIGVVQVVGTLVATLLVDRLGRRPLllVSAIgmgiglLALGLYFYLQEHGALLSSVsWLPLVGLVIYIISFSI 354
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568972542 414 A-YSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYF-----VYLGAYdrfLPYILMGSLTILTAILTLFF-PE 483
Cdd:cd17358  355 GlGPLPWVIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTfpfltLAWGAS---GTFWIFAGICGLALVFVLLFvPE 428
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
364-482 1.89e-08

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 56.35  E-value: 1.89e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 364 LLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYlsTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASR 443
Cdd:cd17442  258 LGINFLGRRLSLVITMGLTAIFFLLLNICTSSAGL--TIFLFMLRALVSANFNTVYIYTAEVYPTTMRALGMGTSGSLCR 335
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 568972542 444 LGSILSPYFV-YLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17442  336 IGAMVAPFISqVLMSASVLGALCLFSSVCIVCAISAFTLP 375
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
358-450 2.80e-08

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 55.67  E-value: 2.80e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 358 AYVLAWLLLQYLPRRySISAALFLGGSVLLFMQLVPSELFYLSTALVMVGkFGITSAYSMVYVYTAELYPTVVRNMGVGV 437
Cdd:cd17365  223 SLLLGWLADRFGPKR-VLALFFALGAVSLALLGVSPASLVLLYVLVFLAG-ACVNGAQVGLYALAARFYPTEVRATGVGW 300
                         90
                 ....*....|...
gi 568972542 438 SSTASRLGSILSP 450
Cdd:cd17365  301 ALGVGRLGAILGP 313
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
314-482 5.17e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 54.88  E-value: 5.17e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 314 VITIMSIILWL-TISVGYFGLSLDTPNLHGdiyvncFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLV 392
Cdd:COG2271  193 YFALYGFLTWLpTYLVEVRGLSLAQAGLLL------SLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLA 266
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 393 PSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV--YLGAYDRFLPYILMGSL 470
Cdd:COG2271  267 LLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVgyLLDATGYQAAFLLLAAL 346
                        170
                 ....*....|..
gi 568972542 471 TILTAILTLFFP 482
Cdd:COG2271  347 ALLAALLALLLL 358
xylE PRK10077
D-xylose transporter XylE; Provisional
213-296 1.12e-07

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 54.31  E-value: 1.12e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 213 FGFMVLPLFAYFIRD-----------WRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRkaaKINGIVAP 281
Cdd:PRK10077 167 FGQLVVYFVNYFIARsgdaswlntdgWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILR---KIMGNTLA 243
                         90
                 ....*....|....*
gi 568972542 282 STIfdpseLQDLNST 296
Cdd:PRK10077 244 TQA-----LQEIKHS 253
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
222-340 2.40e-07

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 53.44  E-value: 2.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  222 AYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIR--------------KAAKINGIVAPSTIFDP 287
Cdd:TIGR01299 327 AYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKlihdtnmrakghpeKVFSVNHIKTIHQEDEL 406
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568972542  288 SELQDLNST---------KPQLHHIY-DLIRTRN--IRVITIMSIILWLTISVGYFGLSLDTPNL 340
Cdd:TIGR01299 407 IEIESDTGTwyqrcfvraLSEGGGIWgNFLRCFNpeVREITIKLMGVWFTLSFGYYGLSVWFPDM 471
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
202-479 3.29e-07

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 52.43  E-value: 3.29e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 202 FATLGVCIFYAFG-FMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWlisqgrikeaeviirkaakingiva 280
Cdd:cd06174  124 LLQAFGSVGGILGpLLGGILASSLGFGWRAVFLIAAALALLAAILLLLVVPDPPE------------------------- 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 281 pstifDPSELQDLNSTKPQLHHIYDLIRTRNIRVITIMSII----------LWLTISVGYFGLSLDTPNLHGDIYVNCFL 350
Cdd:cd06174  179 -----SARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLvnlayysfstLLPLFLLDLGGLSVAVAGLLLSLFGLAGA 253
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 351 LAAVevpayVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSelFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVV 430
Cdd:cd06174  254 LGSL-----LLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPS--LLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEI 326
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 568972542 431 RNMGVGVSSTASRLGSILSPY---FVYLGAYDRFLPYILMGSLTILTAILTL 479
Cdd:cd06174  327 RGTAFGLLNTFGFLGGAIGPLlagFLLAATFGLTGAFLVLAVLLLLAAILLL 378
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
401-482 3.75e-07

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 52.51  E-value: 3.75e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 401 TALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV-YLGAYDRFLPYILMGSLTILTAILTL 479
Cdd:cd17441  290 TVLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAqVMLESSVYLTLSVYSGCCLLAAIASC 369

                 ...
gi 568972542 480 FFP 482
Cdd:cd17441  370 FLP 372
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
222-484 7.74e-07

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 51.72  E-value: 7.74e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 222 AYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKIN--GIVAPSTIFDPSELQdlnstkpq 299
Cdd:cd17363  159 AYQFHSWRVFVIVCALPSVASVVALTFMPESPRFLLEVGKHDEAWMILKQVHDTNmrAKGHPERVFTVSHIK-------- 230
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 300 lhhiydlirtrniRVITIMSIILWLTISVGYFGLSLDTP----------------------------------------- 338
Cdd:cd17363  231 -------------RMNTLFLAIVWFTMSFSYYGLTVWFPdmikylqfedslfeecyfedvtstntffenctfintvfynt 297
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 339 ---------------------------NLHGD----IYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLL 387
Cdd:cd17363  298 dlfeykfidsrflnstfflkekcgchlNDDEEnaylIYLVSFLGSLSVLPGNIVSALLMDKIGRLKMIGGSMLLSAVCCF 377
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 388 FMQLVPSElfylSTALVMVGKFGITS--AYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPY-FVYLGAYDRFLPY 464
Cdd:cd17363  378 FLFFGNSE----SAMIGLQCLFCGVSiaAWNALDVVTVELYPTDKRATAFGFLNGLCKLAAILGNSiFGSFVGITKVIPI 453
                        330       340
                 ....*....|....*....|
gi 568972542 465 ILMGSLTILTAILTLFFPES 484
Cdd:cd17363  454 LLASAALVCGGLLALKLPET 473
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
222-340 3.60e-06

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 49.53  E-value: 3.60e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 222 AYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRkaakingivapstifdpsELQDLN---STKP 298
Cdd:cd17440  159 AYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILK------------------QIHDTNmraRGQP 220
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 568972542 299 QLHHIYDLIRTRNirviTIMSIILWLTISVGYFGLSLDTPNL 340
Cdd:cd17440  221 EKVFTVNRIKKDN----TIKLTIVWLTLSFGYYGLSVWFPDV 258
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
228-261 2.07e-05

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 46.79  E-value: 2.07e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 568972542 228 WRMLLLALTVPGVLCGALWWFIPESPRWLISQGR 261
Cdd:cd17359  162 WRWMLGLEAIPAILFLLGMLFIPESPRWLVSKGK 195
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
222-340 2.89e-05

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 46.56  E-value: 2.89e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 222 AYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKINGIVA--PSTIFDPSELQdlnstkpq 299
Cdd:cd17439  159 AYQFHSWRVFVLVCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKghPERVFSVTHIK-------- 230
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 568972542 300 lhhiydlirtrniRVITIMSIILWLTISVGYFGLSLDTPNL 340
Cdd:cd17439  231 -------------RRITLMMMAVWFTMSFSYYGLTVWFPDM 258
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
209-449 4.42e-05

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 45.74  E-value: 4.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 209 IFYAFGFMVLPLFAYFIRD---WRMLLLALTVPGVLCGAL-WWFIPESPRwlisqgrikeaeviirkaakingivapsti 284
Cdd:COG2814  141 AGLGLGPALGPLLGGLLADlfgWRWVFLVNAVLALLALLLlLRLLPESRP------------------------------ 190
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 285 fdpselqdlNSTKPQLHHIYDLIRTRNIRVITIMSIILWLTISVGYFGLSLDTPNLHG----DIYVNCFLLAAVEVPAYV 360
Cdd:COG2814  191 ---------AARARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGlsasAAGLLLALFGLGGVLGAL 261
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 361 LAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSelFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSST 440
Cdd:COG2814  262 LAGRLADRFGRRRLLLIGLLLLALGLLLLALAGS--LWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNS 339

                 ....*....
gi 568972542 441 ASRLGSILS 449
Cdd:COG2814  340 AFFLGGPLA 348
MFS_1 pfam07690
Major Facilitator Superfamily;
209-450 6.87e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 45.10  E-value: 6.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  209 IFYAFGFMVLPLFAYFI---RDWRMLLLALTVPGVLCGALWWFiPESPRWLISQGRIKEAEVIIRKAAKIngivapstif 285
Cdd:pfam07690 128 AGFGLGAALGPLLGGLLaslFGWRAAFLILAILSLLAAVLLLL-PRPPPESKRPKPAEEARLSLIVAWKA---------- 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  286 dpselqdlnstkpqlhhiydlIRTRNIRVITIMSIILWLTISVGYFGLSLDTPNLHGDIYVNCFLLAAVE----VPAYVL 361
Cdd:pfam07690 197 ---------------------LLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGllgaIGRLLL 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  362 AWLLLQYLPRR-YSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGkFGITSAYSMVYVYTAELYPTVVRNMGVGVSST 440
Cdd:pfam07690 256 GRLSDRLGRRRrLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLG-FGFGLVFPALNALVSDLAPKEERGTASGLYNT 334
                         250
                  ....*....|
gi 568972542  441 ASRLGSILSP 450
Cdd:pfam07690 335 AGSLGGALGP 344
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
211-340 1.33e-04

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 44.53  E-value: 1.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 211 YAFGFMVLPlfAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKIN--GIVAPSTIFDPS 288
Cdd:cd17438  150 YGWGFSMGT--NYHFHSWRVFVIICALPCIASIIALKFMPESPRFLLEMGKHDEAWMILKNIHDTNmrAKGTPEKVFTVS 227
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 568972542 289 ELQDLNstkpqlhhiydlirtrnirviTIMSIILWLTISVGYFGLSLDTPNL 340
Cdd:cd17438  228 NIKRKN---------------------TLFLAVVWFTMAFSYYGLTVWFPDM 258
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
349-484 1.75e-04

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 43.95  E-value: 1.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 349 FLLAAVEVPAYVLAWL---LLQYLPRRYSISAALFLGGSVLLFMQLVPSelFYLSTALVMVGKFGITSAYSMVYVYTAEL 425
Cdd:cd06174   35 LLFALFSLGYALLQPLaglLADRFGRRPVLLLGLLLFALGALLFAFAPS--FWLLLLGRFLLGLGSGLIDPAVLALIADL 112
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568972542 426 YPTVVRNMGVGVSSTASRLGSILSP----YFVYLGAYDRFLPYILMGSLTILTAILTLFFPES 484
Cdd:cd06174  113 FPERERGRALGLLQAFGSVGGILGPllggILASSLGFGWRAVFLIAAALALLAAILLLLVVPD 175
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
191-270 2.87e-04

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 43.33  E-value: 2.87e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 191 TEILSKSIRiifATLGVCI--FYAFGFMVLPLFAYFIrDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVI 268
Cdd:cd17433  120 SEIAHPRVR---GTLGSCVqlMVVIGIMGAYLAGLVL-DWRWLAVLGSIPPTLMLLLMCFMPETPRFLLTQHRRQEAMAA 195

                 ..
gi 568972542 269 IR 270
Cdd:cd17433  196 LR 197
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
341-482 4.20e-04

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 42.45  E-value: 4.20e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 341 HGDIYVnCFLLAaveVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELF-YLSTALVMV----GKFGITSAY 415
Cdd:cd17445  204 PSTFYL-SYLLS---TGTAGLACLFLCATVDRFGRRGILLLAMTLTGIASLILLGLMdYLNDAAIKTfsilGLFSSQAAA 279
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568972542 416 SMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17445  280 SLSILFAAEVIPTVIRGSGLGLIMALGSLGGLSSPLMRLRNQHGYFLHHVVLASLALLAILSIMLLP 346
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
350-484 4.46e-04

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 42.65  E-value: 4.46e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 350 LLAAVEVPAYVLAWLLLQYLPRRYsISAALFLGGSVLLFMQLVPSELFYLSTALVMV--------GKFGitsAYSMVYVY 421
Cdd:cd17364  248 IALAGTVPGYWFTVFLIDRIGRKK-IQMMGFFGMTIFLLILAGPYDHWKISTIGFFVlygltfffSNFG---PNTTTFIV 323
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568972542 422 TAELYPTVVRNMGVGVSSTASRLGSILSPY-FVYLGAYDRFLPY-ILMGSLTILTAILTLFFPES 484
Cdd:cd17364  324 PAEVFPARVRSTCHGISAASGKIGAIVGSFlFLSLTQNIGVRNVlIILAGVALLGIILTLLFPEE 388
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
210-481 4.49e-04

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 42.56  E-value: 4.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 210 FYAFGFMVLPL---FAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRwlisqgrikeaeviirkaakingivapstifd 286
Cdd:cd17325  128 AIGLGFLIGPLlggLLADALGYRAPFLVCAALALLALVLALLLLPEPR-------------------------------- 175
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 287 PSELQDLNSTKPQLHHIYDLIRTRNIRVITIMSIILWLTISVGYFGLSLDTPNLHG-DIYVNCFLLAAVEVPAYVLAWL- 364
Cdd:cd17325  176 PPPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGlSPAQIGLLFGAQGLASALSQPPa 255
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 365 --LLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGKFGITSAYSMVYVytAELYPTVVRNMGVGVSSTAS 442
Cdd:cd17325  256 gkLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALL--ADIVPPEGRGTAMGLFNTAF 333
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 568972542 443 RLGSILSPyfVYLGA-YDRF---LPYILMGSLTILTAILTLFF 481
Cdd:cd17325  334 SLGMVLGP--LLGGFlYDAFgfaTPFLAAAALLLLAAVLFLLL 374
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
148-482 8.71e-04

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 41.69  E-value: 8.71e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 148 LQLPAGLLCELRDVYSAFCPCWHGSDLQLRGSICPGYGHQVggtEILSKSIRIIFaTLGVCIFYAFGFMVLPLFAYFIRD 227
Cdd:cd17443   75 LATLLGVSVALSASPPTFLVLRLLQGGTLAGVFLSLYIARL---ELCDPSHRLMV-SMGAGFFSVAGELLLPGLAVLCRD 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 228 WRMLLLALTVPGVLCGALWWFipesprwlisqgrikeaeviirkaakingivapstifdpselqdlnstkpqlhhiydli 307
Cdd:cd17443  151 WRVLQGVGTLPLLLLLLYWCF----------------------------------------------------------- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 308 RTRNirvitimSIILWLTISVGYFGLSLDTPNLHG---DIYVNCFLLAAVEVPAYVLAWLLLQYLPRR-YSISAALFLGG 383
Cdd:cd17443  172 PSRN-------GLILGFTAFIGGGIRYCFARNLAPfvpTFYLPYFLQAGLEALACIFLCLTVDRCGRRgVLLLGTIVTGL 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 384 SVLLFMQLVPSELFYLSTALVMVGKFGiTSAYSMVYV-YTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFL 462
Cdd:cd17443  245 SSLLLLALTQYLHGGLVLVLSVVGLLA-SHAVSMLSMfFAAEVLPTVIRGAGLGLIMGAGFLGRAAGPLMELQNKQGYFL 323
                        330       340
                 ....*....|....*....|
gi 568972542 463 PYILMGSLTILTAILTLFFP 482
Cdd:cd17443  324 HHVVFASFAVLSVLCILLLP 343
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
201-265 1.11e-03

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 41.36  E-value: 1.11e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568972542 201 IFATLGVCIFYAFGFMVlplfayfirDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEA 265
Cdd:cd17434  137 IMAVFGSLALYALGLLL---------PWRWLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKA 192
MFS_1 pfam07690
Major Facilitator Superfamily;
365-483 1.72e-03

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 40.86  E-value: 1.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542  365 LLQYLPRRYSISAALFLGGSVLLFMQLVPSeLFYLSTALVMVGkFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRL 444
Cdd:pfam07690  55 LSDRFGRRRVLLIGLLLFALGLLLLLFASS-LWLLLVLRVLQG-LGAGALFPAALALIADWFPPEERGRALGLVSAGFGL 132
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 568972542  445 GSILSPYFV-YLGAYDRF-LPYILMGSLTILTAILTLFFPE 483
Cdd:pfam07690 133 GAALGPLLGgLLASLFGWrAAFLILAILSLLAAVLLLLPRP 173
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
371-481 1.94e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 40.67  E-value: 1.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 371 RRYSISAALFLGGSVLLFMQLVPSE--LFYLSTALVMvgkFGITSAYSMVYVYTAELYPT--VVRNMGVGVSS--TASRL 444
Cdd:cd17353  278 RKNTLSIAFLIQGVAMFLLPFIGSVavLFVLGVALIG---FCYGGGFALFPALTADFFGTknAGTNYGLLYTAkgVGGLI 354
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 568972542 445 GSILSPYFVYLGAYDRflPYILMGSLTILTAILTLFF 481
Cdd:cd17353  355 GPIIAAYVLYTGGYNA--AFIIAAALSLVALALALLL 389
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
343-482 2.40e-03

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 40.19  E-value: 2.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 343 DIYVNCFLLAAVEVPAYVLAWLLLQYLPRR---------YSISAALFLGGSVLL-------FMQLVPSELFYLSTALVMV 406
Cdd:cd17373  193 NFYLDYYLTAGIAAVACVFLCVTVDFLGRRgglllfmilTGLASLLLLGLLNLIgkysqhpDSGMSDSVKDKFSIAFSVL 272
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568972542 407 GKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFP 482
Cdd:cd17373  273 GLFASHAVGSLSVLFAAEVTPTVIRGGGLGLVLASGGLGMLTGPIIELHNQKGYFLQHVVFACCALLCILCILLLP 348
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
295-483 4.94e-03

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 39.48  E-value: 4.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 295 STKPQLHHIYDLIRTRNIRVITIM---------SIILWL-TISVGYFGLSLDTPNLhgdiYVncFLLAAVEVPAYVLAWL 364
Cdd:COG2223  190 AAKASLRDQLEALRDPRFWLLSLLyfgtfgsfiGFSSWLpPYLVDQFGLSAATAGL----LA--ALFALLGALGRPLGGW 263
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 365 LLQYLPRR--YSISAALFLGGSVLLFMQLVPSELFYLSTALVMVGkFGITSAysMVYVYTAELYPTVVRNMGVGVSSTAS 442
Cdd:COG2223  264 LSDRIGGRrvLLIVFALMALGLLLLALALGSLWLFLVLFLLLGLA-LGGGNG--AVFALVPDIFPTKNAGAVYGLVGAAG 340
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 568972542 443 RLGSILSPYFV-----YLGAYDrfLPYILMGSLTILTAILTLFFPE 483
Cdd:COG2223  341 GLGGFLGPLLFgalldATGSYT--AAFLVFAVLALVALVLTLLLYR 384
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
220-483 7.94e-03

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 38.82  E-value: 7.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 220 LFAYFIRD--WRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIirkaakingiVAPSTIFDPselqdlnstk 297
Cdd:cd17371  146 LFPLLPPEiaWRVLFLLGALPALLVLFIRRFVKEPPQWQAARAARRHFADR----------PSLRELFSP---------- 205
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 298 pqlhhiydlirtrNIRVITIMSIILWLTISVGYFGLSLDTPNL---------HGDIYVNcFLLAAVEVPAYVLAWLLLQY 368
Cdd:cd17371  206 -------------PLLRTTLLASLLATGALGGYYGITTWLPSYltgerglsfEGSAGYL-VVTILGGFLGYLAGGFLADR 271
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 369 LPRRYSIsAALFLGG--SVLLFMQL--VPSELFYLSTALvmvgKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRL 444
Cdd:cd17371  272 IGRRNNF-ALFALGSaiSILLYFFLplSPTLILILGFPL----GFFASGPFSGMGAYLTELFPTAVRATAQGFCYNVGRI 346
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 568972542 445 GSILSPYFV-YLGAYDRFLPYILMGSLT--ILTAILTLFFPE 483
Cdd:cd17371  347 IGALFPFLVgFLATSGSLGTAIAVFAAVyyIAGLVLALLLPE 388
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
358-450 9.06e-03

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 38.40  E-value: 9.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568972542 358 AYVLAWLLLQYLPRRysISAALFLGGSVLLFMQLVPSELFYLSTALVMVGKFgITSAYSMVYVYTAELYPTVVRNMGVGV 437
Cdd:PRK11551 272 SLLIGALMDRLRPRR--VVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF-VVGGQSVLYALAPLFYPTQVRGTGVGA 348
                         90
                 ....*....|...
gi 568972542 438 SSTASRLGSILSP 450
Cdd:PRK11551 349 AVAVGRLGSMAGP 361
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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