|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
507-1074 |
3.02e-17 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 88.46 E-value: 3.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 507 PSTPKRQSTPKPPRVKPAPEPETRPS--AQTTKAPRKTKKPghhrlrRPKTTRSPEVPKSKPALEPAtvtpeilvpkivP 584
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSepAVTSRARRPDAPP------QSARPRAPVDDRGDPRGPAP------------P 2614
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 585 KPPqkPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEpvitrtkasvttlAPKPPRPRTHRQRTKYKTTQSPKIP 664
Cdd:PHA03247 2615 SPL--PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRD-------------DPAPGRVSRPRRARRLGRAAQASSP 2679
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 665 HSKPAdlgPITSEPPLASTTKKVRRPRP--KPQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYPhPKPK 742
Cdd:PHA03247 2680 PQRPR---RRAARPTVGSLTSLADPPPPppTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP-GGPA 2755
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 743 TTRSPAASPTELVPTPVFEPVT-PLKEDPVTTIAPKTPKRTRRPRPKPQTTPTPETPLTKPVAATDLEPSALSTEVPATV 821
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAgPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ 2835
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 822 VLATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTGVSESKSaptelqSLVLKPVTSPSLEiiqsqsvsddlel 901
Cdd:PHA03247 2836 PTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV------RRLARPAVSRSTE------------- 2896
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 902 vafSTESPQKTIAPRQTTSMPPKLKTPHSRMPAKEPVPKEPlhttsKPKMPPSPEVADTTSVPKDERLSLKPDPEVTHSE 981
Cdd:PHA03247 2897 ---SFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP-----PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALV 2968
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 982 TVLPPVT-FRVEPPKTTIAPLETRGIPLIPVISPRPSQEELQTAM-EETDQSTQELFTT-KIPRTTELAKTTQA----PH 1054
Cdd:PHA03247 2969 PGRVAVPrFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALhEETDPPPVSLKQTlWPPDDTEDSDADSLfdsdSE 3048
|
570 580
....*....|....*....|
gi 568995630 1055 RLHTAPVRPrIPGRPHGRPA 1074
Cdd:PHA03247 3049 RSDLEALDP-LPPEPHDPFA 3067
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1269-1360 |
2.19e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.66 E-value: 2.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1269 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1346
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 568995630 1347 LGEGPASNTVAFST 1360
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1270-1350 |
6.88e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.46 E-value: 6.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1270 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1347
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 568995630 1348 GEG 1350
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1270-1353 |
9.40e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.18 E-value: 9.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1270 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1346
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 568995630 1347 LGEGPAS 1353
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1052-1272 |
3.71e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 3.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1052 APHRLHTAPVRPRIPGRPHGRP---ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPgrnASVDSHATRKPGSVSG 1128
Cdd:PHA03247 2556 PPAAPPAAPDRSVPPPRPAPRPsepAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1129 TRRPPIPHRHSSTRPVSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGT 1208
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568995630 1209 TTDFSSSPTKETDPLGKPRFIGPHVRYIPKPENKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1272
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
384-758 |
9.08e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.07 E-value: 9.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 384 PEFPEAKTAFPLEKPRGSWASSEEPWVVPGAKTSEDSRVVQPQTATYDVISSSTTSDETEIEIHTATRDPILDSV----- 458
Cdd:pfam03154 171 PPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPhpplq 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 459 -------PPKTSRTAEQPRATLAPIEALFESrnveIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPE----- 526
Cdd:pfam03154 251 pmtqpppPSQVSPQPLPQPSLHGQMPPMPHS----LQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSqqrih 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 527 -PETRPSAQTTKAPRKTKKP----GHHRLRRPKTTRSPEVPKSKPALEPATVT---PEILVPKIVPKPPQKPKATRRPEV 598
Cdd:pfam03154 327 tPPSQSQLQSQQPPREQPLPpaplSMPHIKPPPTTPIPQLPNPQSHKHPPHLSgpsPFQMNSNLPPPPALKPLSSLSTHH 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 599 PqvkPAHEPVTFGSEAPALAIVTTTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEP 678
Cdd:pfam03154 407 P---PSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPT 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 679 PLASTTKKVRRPRPKPQTTPHPeVPHTilvPATSLEPFIITEAPgttlvPKLPQQPDYPHPKPkttRSPAASPTeLVPTP 758
Cdd:pfam03154 484 STSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA-----LDEAEEPESPPPPP---RSPSPEPT-VVNTP 550
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1254-1365 |
9.12e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.92 E-value: 9.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1254 PTEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKP 1333
Cdd:COG3401 220 PSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTN 294
|
90 100 110
....*....|....*....|....*....|...
gi 568995630 1334 DTSYEFQVKPKNPLG-EGPASNTVAFSTESADP 1365
Cdd:COG3401 295 GTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.52e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.02 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 568995630 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
114-195 |
2.11e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.45 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 114 PRKPLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTV 189
Cdd:smart00060 1 PSPPSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTE 69
|
....*.
gi 568995630 190 YEFGVK 195
Cdd:smart00060 70 YEFRVR 75
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
114-195 |
2.12e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.71 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 114 PRKPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpsdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYE 191
Cdd:cd00063 1 PSPPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYE 71
|
....
gi 568995630 192 FGVK 195
Cdd:cd00063 72 FRVR 75
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
491-703 |
3.99e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.76 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 491 PEVRPTTAAPQ---QTTSIPSTPKRQSTPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:NF033839 286 EPGNKKPSAPKpgmQPSPQPEKKEVKPEPETPKPEVKPQLEK-PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 568 LEPATVTPEilvpKIVPKPPQKPKATRRPEVPQVKPAHEPvtfGSEAPalaivtTTDIEPVITRTKASVTTlAPKPPRPR 647
Cdd:NF033839 365 VKPQPEKPK----PEVKPQPETPKPEVKPQPEKPKPEVKP---QPEKP------KPEVKPQPEKPKPEVKP-QPEKPKPE 430
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 568995630 648 THRQRTKYKttqspkiPHSKPADLGPITSEPPLASTTKKVRRP---RPKPQTTPHPEVP 703
Cdd:NF033839 431 VKPQPEKPK-------PEVKPQPEKPKPEVKPQPETPKPEVKPqpeKPKPEVKPQPEKP 482
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
428-770 |
2.95e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.34 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 428 ATYDVISSSTTSDETEIEIHTATR-------DPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVR------ 494
Cdd:COG5665 208 STPQAFNASATSGRSQHIVQAAKRvgvewwgDPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntpts 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 495 --------PTTAAPQQTTSIPSTPKRQSTPKPPRV--KPAPEPETRPSAQTTKAPRKTKKPGHhrlrRPKTTRSPEVPKS 564
Cdd:COG5665 288 takaqpqpPTKKQPAKEPPSDTASGNPSAPSVLINsdSPTSEDPATASVPTTEETTAFTTPSS----VPSTPAEKDTPAT 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 565 KPALEPATVTPEILV-PKIVPKPPQKPKATrrpevpqvkpAHEPVTFGSEAPalaivtttdiepvitrtkASVTTLAPKP 643
Cdd:COG5665 364 DLATPVSPTPPETSVdKKVSPDSATSSTKS----------EKEGGTASSPMP------------------PNIAIGAKDD 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 644 PRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLAS--------TTKKVRRPRPKPQTTPHPEVPHTILVPATSLEP 715
Cdd:COG5665 416 VDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAgsdlepenTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANET 495
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 716 FIITEAPGTTLVPKLPQQ--PDYPHPKPKTT---RSPAASPTELVPTPVFEPVTPLKEDP 770
Cdd:COG5665 496 GPPVIRRDSTPSSTADQSivGVLAFGLDQRTqaeISVEAASRSNPLLNSQVKSFPLGKRS 555
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
307-575 |
3.15e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 307 TLALPAESKTPEVEKLAGQPVTVTPESVSRSTKPTLSSALDTAETALVLSEKTSE-TARSVLIPEFELPLSTLAPkrfpe 385
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPAASPAGPLPP----- 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 386 fPEAKTAFPLEKPRGSWASSEEP--WVVPGAKtsedsrvvqpqtatydvISSSTTSDETEIEIHTATRDPILDSVPPKTS 463
Cdd:PHA03247 2831 -PTSAQPTAPPPPPGPPPPSLPLggSVAPGGD-----------------VRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 464 RTAE---QPRATLAPiealfeSRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtrPSAQTTKAPR 540
Cdd:PHA03247 2893 RSTEsfaLPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGE--PSGAVPQPWL 2964
|
250 260 270
....*....|....*....|....*....|....*
gi 568995630 541 KTKKPGHHRLRRpktTRSPEVPKSKPALEPATVTP 575
Cdd:PHA03247 2965 GALVPGRVAVPR---FRVPQPAPSREAPASSTPPL 2996
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
507-1074 |
3.02e-17 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 88.46 E-value: 3.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 507 PSTPKRQSTPKPPRVKPAPEPETRPS--AQTTKAPRKTKKPghhrlrRPKTTRSPEVPKSKPALEPAtvtpeilvpkivP 584
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSepAVTSRARRPDAPP------QSARPRAPVDDRGDPRGPAP------------P 2614
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 585 KPPqkPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEpvitrtkasvttlAPKPPRPRTHRQRTKYKTTQSPKIP 664
Cdd:PHA03247 2615 SPL--PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRD-------------DPAPGRVSRPRRARRLGRAAQASSP 2679
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 665 HSKPAdlgPITSEPPLASTTKKVRRPRP--KPQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYPhPKPK 742
Cdd:PHA03247 2680 PQRPR---RRAARPTVGSLTSLADPPPPppTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP-GGPA 2755
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 743 TTRSPAASPTELVPTPVFEPVT-PLKEDPVTTIAPKTPKRTRRPRPKPQTTPTPETPLTKPVAATDLEPSALSTEVPATV 821
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAgPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ 2835
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 822 VLATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTGVSESKSaptelqSLVLKPVTSPSLEiiqsqsvsddlel 901
Cdd:PHA03247 2836 PTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV------RRLARPAVSRSTE------------- 2896
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 902 vafSTESPQKTIAPRQTTSMPPKLKTPHSRMPAKEPVPKEPlhttsKPKMPPSPEVADTTSVPKDERLSLKPDPEVTHSE 981
Cdd:PHA03247 2897 ---SFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP-----PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALV 2968
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 982 TVLPPVT-FRVEPPKTTIAPLETRGIPLIPVISPRPSQEELQTAM-EETDQSTQELFTT-KIPRTTELAKTTQA----PH 1054
Cdd:PHA03247 2969 PGRVAVPrFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALhEETDPPPVSLKQTlWPPDDTEDSDADSLfdsdSE 3048
|
570 580
....*....|....*....|
gi 568995630 1055 RLHTAPVRPrIPGRPHGRPA 1074
Cdd:PHA03247 3049 RSDLEALDP-LPPEPHDPFA 3067
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
398-783 |
1.31e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 73.43 E-value: 1.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 398 PRGSWASSEEPWVVPGAKTSEDSRVVQPQTAtydvissSTTSDETEIEIHTATRDPILDSVPPKTSRtaeqPRATLAPIE 477
Cdd:PHA03247 2604 DRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA-------ANEPDPHPPPTVPPPERPRDDPAPGRVSR----PRRARRLGR 2672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 478 ALFESRNVEIFTSPEVRPTTaAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGhhrlrRPKTTR 557
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTV-GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPA-----PPAVPA 2746
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 558 SPEVPKS--KPALEPATVTPEILVPKIVPKPPQKPKATRrpevPQVKPAHEPVTFGSEAPALAIVTTtdiePVITRTKAS 635
Cdd:PHA03247 2747 GPATPGGpaRPARPPTTAGPPAPAPPAAPAAGPPRRLTR----PAVASLSESRESLPSPWDPADPPA----AVLAPAAAL 2818
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 636 VTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKP-----ADLGPITSEPPLASTTKKV-----------------RRPRPK 693
Cdd:PHA03247 2819 PPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlggsvAPGGDVRRRPPSRSPAAKPaaparppvrrlarpavsRSTESF 2898
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 694 PQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYPhPKPKTTRSPAASPTELVPTP-----------VFEP 762
Cdd:PHA03247 2899 ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP-LAPTTDPAGAGEPSGAVPQPwlgalvpgrvaVPRF 2977
|
410 420
....*....|....*....|.
gi 568995630 763 VTPLKEDPVTTIAPKTPKRTR 783
Cdd:PHA03247 2978 RVPQPAPSREAPASSTPPLTG 2998
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
509-776 |
2.40e-12 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 72.03 E-value: 2.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 509 TPKRQSTPKPPRV-----KPAPEPETRPSA--QTTKAPRKTKKPGHHRlrRPKTTRSPEVPKS--KPALEPATVTPEILV 579
Cdd:PTZ00449 542 EPKEGGKPGETKEgevgkKPGPAKEHKPSKipTLSKKPEFPKDPKHPK--DPEEPKKPKRPRSaqRPTRPKSPKLPELLD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 580 PKIVPKPPQKPKATRRPevpqvkpahepvtfgseapalaivtttdiepvitrtkasvttlaPKPPRPRTHRQRTKYKTTQ 659
Cdd:PTZ00449 620 IPKSPKRPESPKSPKRP--------------------------------------------PPPQRPSSPERPEGPKIIK 655
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 660 SPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPgTTLVPKLPQQPDYPHP 739
Cdd:PTZ00449 656 SPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTP-RPLPPKLPRDEEFPFE 734
|
250 260 270
....*....|....*....|....*....|....*..
gi 568995630 740 KPKTTRSPAASPTELVPTPVfEPVTPLKEDPVTTIAP 776
Cdd:PTZ00449 735 PIGDPDAEQPDDIEFFTPPE-EERTFFHETPADTPLP 770
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1269-1360 |
2.19e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.66 E-value: 2.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1269 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1346
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 568995630 1347 LGEGPASNTVAFST 1360
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
545-1215 |
2.09e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.57 E-value: 2.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 545 PGHHRLRRPKTTRSPEVPKSKPalEPATVTPEilvPKIVPKPPQKPKATRRPEVPQVKPAHEPV-TFGSEAPALAIVTTT 623
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAAP--DPGGGGPP---DPDAPPAPSRLAPAILPDEPVGEPVHPRMlTWIRGLEELASDDAG 2549
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 624 DIEPvitrtkasvtTLAPKPPRPRTHRQrtkykttqspkIPHSKPAdlgPITSEPplaSTTKKVRRPRPKPQttphpevP 703
Cdd:PHA03247 2550 DPPP----------PLPPAAPPAAPDRS-----------VPPPRPA---PRPSEP---AVTSRARRPDAPPQ-------S 2595
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 704 HTILVPATSLEPFIITEAPGTtlvpkLPQQPDYPHPKPKTTRSPAASPTELVPTPvfepvTPLKEDPVTTIAPKTPKRTR 783
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSP-----LPPDTHAPDPPPPSPSPAANEPDPHPPPT-----VPPPERPRDDPAPGRVSRPR 2665
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 784 RPRPKPQTTPTPETPLTKPVAAtdlepsalsteVPATVVLATALTPvtlrtkapktttlAPNVQRTRRPHPRPKTTASTG 863
Cdd:PHA03247 2666 RARRLGRAAQASSPPQRPRRRA-----------ARPTVGSLTSLAD-------------PPPPPPTPEPAPHALVSATPL 2721
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 864 VSESKSAPTELQSLVLKPVTSPSLEiiqsqsvsddlelvAFSTESPQKTIAPRQTTSMPPKLKTPHSRM---PAKEPVPK 940
Cdd:PHA03247 2722 PPGPAAARQASPALPAAPAPPAVPA--------------GPATPGGPARPARPPTTAGPPAPAPPAAPAagpPRRLTRPA 2787
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 941 EPLHTTSKPKMPPSPEVADTTSVpkderlSLKPDPEVTHSETVLPPVtfrvePPKTTIAPLEtrgipliPVISPRPSQEE 1020
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPPAA------VLAPAAALPPAASPAGPL-----PPPTSAQPTA-------PPPPPGPPPPS 2849
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1021 LQTameETDQSTQELFTTKIPrttelaktTQAPHRLHTAPVRPRIpgRPHGRPALNKTTTrpdktkprgtshkngvgtgt 1100
Cdd:PHA03247 2850 LPL---GGSVAPGGDVRRRPP--------SRSPAAKPAAPARPPV--RRLARPAVSRSTE-------------------- 2896
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1101 KQAPKPPSPGRnasvdshaTRKPGSVSGTRRPPIPHRHSSTRPvSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATL 1180
Cdd:PHA03247 2897 SFALPPDQPER--------PPQPQAPPPPQPQPQPPPPPQPQP-PPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967
|
650 660 670
....*....|....*....|....*....|....*
gi 568995630 1181 HPIGTATARPGAEQKEPTAPASEEEFGTTTDFSSS 1215
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1270-1350 |
6.88e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.46 E-value: 6.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1270 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1347
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 568995630 1348 GEG 1350
Cdd:smart00060 81 GEG 83
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
381-767 |
1.62e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 56.24 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 381 KRFPEFPEAKTAFPLEKPRGSWASSEEPwVVPGAKTSEdSRVVQPQTATYDVISSSTTSDETEIEI---------HTATR 451
Cdd:PTZ00449 494 KKLAPIEEEDSDKHDEPPEGPEASGLPP-KAPGDKEGE-EGEHEDSKESDEPKEGGKPGETKEGEVgkkpgpakeHKPSK 571
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 452 DPILDSVP-----PKTSRTAEQPRATLAPIEAlfesrnveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRvkpAPE 526
Cdd:PTZ00449 572 IPTLSKKPefpkdPKHPKDPEEPKKPKRPRSA-----------QRPTRPKSPKLPELLDIPKSPKRPESPKSPK---RPP 637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 527 PETRPSAQttkaprktkkpghhrlRRPKTTRSPEVPKSKPAlepatvtpeilvpkivPKPPQKPKATRRPEVPQVKPAHE 606
Cdd:PTZ00449 638 PPQRPSSP----------------ERPEGPKIIKSPKPPKS----------------PKPPFDPKFKEKFYDDYLDAAAK 685
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 607 PVTFGSEAPALAIVTTTDIEPVITRTKASVTTLAPKPP-RPRThrqrtkykttqsPKIPHSKPADlgpitsePPLASTTK 685
Cdd:PTZ00449 686 SKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPkLPRD------------EEFPFEPIGD-------PDAEQPDD 746
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 686 KVRRPRPKPQTTPHPEvphtilVPATSLEPFIITEAPGTTLVPKLPQQPDYPHPKPKttrspaaSPTELVPTPVFE-PVT 764
Cdd:PTZ00449 747 IEFFTPPEEERTFFHE------TPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPD-------SPSEHEDKPPGDhPSL 813
|
...
gi 568995630 765 PLK 767
Cdd:PTZ00449 814 PKK 816
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1270-1353 |
9.40e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.18 E-value: 9.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1270 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1346
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 568995630 1347 LGEGPAS 1353
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
517-703 |
5.44e-06 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 51.21 E-value: 5.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 517 KPPRVKPAPEPETRPSAQT---TKAPRKTKKPGHHRLRRPKTTRSPEVPkskpaLEPATVTPEILVPKIVPKPPQKPKAT 593
Cdd:PHA03377 414 RKPRTLPWPTPKTHPVKRTlvkTSGRSDEAEQAQSTPERPGPSDQPSVP-----VEPAHLTPVEHTTVILHQPPQSPPTV 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 594 rrpevpQVKPAHEPVTFGSEApalAIVTTTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPK---IPHSKPAD 670
Cdd:PHA03377 489 ------AIKPAPPPSRRRRGA---CVVYDDDIIEVIDVETTEEEESVTQPAKPHRKVQDGFQRSGRRQKratPPKVSPSD 559
|
170 180 190
....*....|....*....|....*....|...
gi 568995630 671 LGPITSEPPLASTTKKVRRPRPKPQTTPHPEVP 703
Cdd:PHA03377 560 RGPPKASPPVMAPPSTGPRVMATPSTGPRDMAP 592
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1052-1272 |
3.71e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 3.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1052 APHRLHTAPVRPRIPGRPHGRP---ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPgrnASVDSHATRKPGSVSG 1128
Cdd:PHA03247 2556 PPAAPPAAPDRSVPPPRPAPRPsepAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1129 TRRPPIPHRHSSTRPVSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGT 1208
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568995630 1209 TTDFSSSPTKETDPLGKPRFIGPHVRYIPKPENKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1272
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
384-758 |
9.08e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.07 E-value: 9.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 384 PEFPEAKTAFPLEKPRGSWASSEEPWVVPGAKTSEDSRVVQPQTATYDVISSSTTSDETEIEIHTATRDPILDSV----- 458
Cdd:pfam03154 171 PPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPhpplq 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 459 -------PPKTSRTAEQPRATLAPIEALFESrnveIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPE----- 526
Cdd:pfam03154 251 pmtqpppPSQVSPQPLPQPSLHGQMPPMPHS----LQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSqqrih 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 527 -PETRPSAQTTKAPRKTKKP----GHHRLRRPKTTRSPEVPKSKPALEPATVT---PEILVPKIVPKPPQKPKATRRPEV 598
Cdd:pfam03154 327 tPPSQSQLQSQQPPREQPLPpaplSMPHIKPPPTTPIPQLPNPQSHKHPPHLSgpsPFQMNSNLPPPPALKPLSSLSTHH 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 599 PqvkPAHEPVTFGSEAPALAIVTTTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEP 678
Cdd:pfam03154 407 P---PSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPT 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 679 PLASTTKKVRRPRPKPQTTPHPeVPHTilvPATSLEPFIITEAPgttlvPKLPQQPDYPHPKPkttRSPAASPTeLVPTP 758
Cdd:pfam03154 484 STSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA-----LDEAEEPESPPPPP---RSPSPEPT-VVNTP 550
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1254-1365 |
9.12e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.92 E-value: 9.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1254 PTEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKP 1333
Cdd:COG3401 220 PSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTN 294
|
90 100 110
....*....|....*....|....*....|...
gi 568995630 1334 DTSYEFQVKPKNPLG-EGPASNTVAFSTESADP 1365
Cdd:COG3401 295 GTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
921-1271 |
9.60e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 9.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 921 MPPKLK--TPHSRMPAKEPVPKEP-LHTTSKPKMPPSPEVADTTSVPKDERlslkPDPEVTHSETVLPPVTFRVEPPKTT 997
Cdd:PHA03247 2555 LPPAAPpaAPDRSVPPPRPAPRPSePAVTSRARRPDAPPQSARPRAPVDDR----GDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 998 IAPLETRGIPLIPVISPRPSQEELQTAMEETDQSTQelfTTKIPRTTELAKTTQAPHRLHTAP--------VRPRIPGR- 1068
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRR---ARRLGRAAQASSPPQRPRRRAARPtvgsltslADPPPPPPt 2707
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1069 PHGRP---------------ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPP 1133
Cdd:PHA03247 2708 PEPAPhalvsatplppgpaaARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPA 2787
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1134 IPHRHSSTRPVSPERRPLPPNNVTgkPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGttTDFS 1213
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPPAAV--LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG--GDVR 2863
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568995630 1214 SSPTKETDPLGKPRFIGPHVRYIPKPENKPCSIT-----DSVRRFPTEEATEGNATSPPQNPP 1271
Cdd:PHA03247 2864 RRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfalppDQPERPPQPQAPPPPQPQPQPPPP 2926
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1254-1408 |
1.19e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1254 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1331
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568995630 1332 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1408
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.52e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.02 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 568995630 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
114-195 |
2.11e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.45 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 114 PRKPLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTV 189
Cdd:smart00060 1 PSPPSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTE 69
|
....*.
gi 568995630 190 YEFGVK 195
Cdd:smart00060 70 YEFRVR 75
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
114-195 |
2.12e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.71 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 114 PRKPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpsdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYE 191
Cdd:cd00063 1 PSPPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYE 71
|
....
gi 568995630 192 FGVK 195
Cdd:cd00063 72 FRVR 75
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
489-784 |
3.41e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 3.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 489 TSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPK----- 563
Cdd:PHA03307 88 PTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVasdaa 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 564 ----------SKPALEPATVTPEILVPKIVPKPPQKPKAtRRPEVPQVKPAHEPVTFGSEAPALAIVTTTD--IEPVITR 631
Cdd:PHA03307 168 ssrqaalplsSPEETARAPSSPPAEPPPSTPPAAASPRP-PRRSSPISASASSPAPAPGRSAADDAGASSSdsSSSESSG 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 632 TKASVTTLAPKpPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKvRRPRPKPQTTPHPEVPHTILVPAT 711
Cdd:PHA03307 247 CGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSP-SSPGSGPAPSSPRASSSSSSSRES 324
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568995630 712 SLE-PFIITEAPGTTLVPklPQQPDYPHPKPKTTRSPAASPtelvPTPVFEPVTPLKEDPVTTIAPKTPKRTRR 784
Cdd:PHA03307 325 SSSsTSSSSESSRGAAVS--PGPSPSRSPSPSRPPPPADPS----SPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
491-703 |
3.99e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.76 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 491 PEVRPTTAAPQ---QTTSIPSTPKRQSTPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:NF033839 286 EPGNKKPSAPKpgmQPSPQPEKKEVKPEPETPKPEVKPQLEK-PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 568 LEPATVTPEilvpKIVPKPPQKPKATRRPEVPQVKPAHEPvtfGSEAPalaivtTTDIEPVITRTKASVTTlAPKPPRPR 647
Cdd:NF033839 365 VKPQPEKPK----PEVKPQPETPKPEVKPQPEKPKPEVKP---QPEKP------KPEVKPQPEKPKPEVKP-QPEKPKPE 430
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 568995630 648 THRQRTKYKttqspkiPHSKPADLGPITSEPPLASTTKKVRRP---RPKPQTTPHPEVP 703
Cdd:NF033839 431 VKPQPEKPK-------PEVKPQPEKPKPEVKPQPETPKPEVKPqpeKPKPEVKPQPEKP 482
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
515-626 |
4.07e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.80 E-value: 4.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 515 TPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKttrsPEVPKSKPalePATVTPEILVPKIVPKPPQKPKATR 594
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPK----EPVRETAT---PPPVPPRPVAPPVPHTPESAPKLTR 433
|
90 100 110
....*....|....*....|....*....|..
gi 568995630 595 RPEVPQVKPAHEPVTFGSEAPALAIVTTTDIE 626
Cdd:PRK14950 434 AAIPVDEKPKYTPPAPPKEEEKALIADGDVLE 465
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
553-777 |
5.12e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.53 E-value: 5.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 553 PKTTRSPEVPKSKPalePATVTPEILVPKIVPKPPQKPKATRRPEVP-----QVKPAHEPVTFGSEAPALAIVTTTDIEP 627
Cdd:PLN03209 330 PKESDAADGPKPVP---TKPVTPEAPSPPIEEEPPQPKAVVPRPLSPytayeDLKPPTSPIPTPPSSSPASSKSVDAVAK 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 628 VITRTKASVTTLAPKPPRPRTHRQRTKyktTQSPKIPHSKPADLGPITSepplasttkkvrrPRPKPQTTPHPEVPHTIL 707
Cdd:PLN03209 407 PAEPDVVPSPGSASNVPEVEPAQVEAK---KTRPLSPYARYEDLKPPTS-------------PSPTAPTGVSPSVSSTSS 470
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568995630 708 VPATSLEP----FIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIAPK 777
Cdd:PLN03209 471 VPAVPDTApataATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADE 544
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
491-778 |
5.45e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 44.60 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:PHA03369 362 AAAKVAVIAAPQTHTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPQSPGTSYGPEPVGPVPPQPT 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 571 ATVTPEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPVTFGSEAPalaivtTTDIEPVITRTKASVTTLAPKPPRPRTHR 650
Cdd:PHA03369 442 NPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEELIETLKLVK------KLKEEQESLAKELEATAHKSEIKKIAESE 515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 651 QRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPGT------ 724
Cdd:PHA03369 516 FKNAGAKTAAANIEPNCSADAAAPATKRARPETKTELEAVVRFPYQIRNMESPAFVHSFTSTTLAAAAGQGSDTaealag 595
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 568995630 725 ---TLVPKLPQQPDYPHpkpktTRSPAASPTELVPTPVFEPVTPLKEDPVTTIAPKT 778
Cdd:PHA03369 596 aieTLLTQASAQPAGLS-----LPAPAVPVNASTPASTPPPLAPQEPPQPGTSAPSL 647
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
423-777 |
5.58e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 44.18 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 423 VQPQTATYDVISSSTTSDETEIEIHTATRDPilDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPevrptTAAPQQ 502
Cdd:pfam17823 65 AAPAPVTLTKGTSAAHLNSTEVTAEHTPHGT--DLSEPATREGAADGAASRALAAAASSSPSSAAQSLP-----AAIAAL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 503 TTSIPSTPKRQSTPKPPRVkpAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKI 582
Cdd:pfam17823 138 PSEAFSAPRAAACRANASA--APRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 583 VPKPPQKPKATRRPEVPQVKPAHEPVT--FGSEAPAlAIVTTTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQS 660
Cdd:pfam17823 216 ATATGHPAAGTALAAVGNSSPAAGTVTaaVGTVTPA-ALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARN 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 661 PkIPHSKPADLGPI---TSEPPLASTTKKvrrprpkpqttPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYP 737
Cdd:pfam17823 295 P-AAPMGAQAQGPIiqvSTDQPVHNTAGE-----------PTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASP 362
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 568995630 738 HPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIAPK 777
Cdd:pfam17823 363 VPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLAPE 402
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
491-705 |
1.06e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.90 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 491 PEVRPTTAapQQTTSIPSTPKRqSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGH----HRLRRPKTTRSPEV---PK 563
Cdd:PHA03378 576 PLTSPTTS--QLASSAPSYAQT-PWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRpipmRPLRMQPITFNVLVfptPH 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 564 SKPALEPATVTPEILVPKIVP-----------KPPQKPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEPVITRT 632
Cdd:PHA03378 653 QPPQVEITPYKPTWTQIGHIPyqpsptgantmLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPG 732
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568995630 633 KASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHT 705
Cdd:PHA03378 733 RARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPT 805
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
639-1084 |
1.13e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.52 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 639 LAPKPPRPRTHRQRTK--YKTTQSPKiPHSKPADL--GPITSEPPLASTTKKVRRP----RPK-PQTTPHPEVPHTilvP 709
Cdd:PTZ00449 519 LPPKAPGDKEGEEGEHedSKESDEPK-EGGKPGETkeGEVGKKPGPAKEHKPSKIPtlskKPEfPKDPKHPKDPEE---P 594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 710 ATSLEPfIITEAPGTTLVPKLPQQPDYPhpkpKTTRSPAASPTELVPTPVFEPVTPlkEDPVTTIAPKTPKrtrrprPKP 789
Cdd:PTZ00449 595 KKPKRP-RSAQRPTRPKSPKLPELLDIP----KSPKRPESPKSPKRPPPPQRPSSP--ERPEGPKIIKSPK------PPK 661
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 790 QTTPTPETPLTKPVAATDLEPSALSTEVPATVVLATALTPVTLRTKAPKTTTlaPNVQRTRRPHPRPKTTASTgvSESKS 869
Cdd:PTZ00449 662 SPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGT--PFTTPRPLPPKLPRDEEFP--FEPIG 737
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 870 APTELQSLVLKPVTSPSLEIIQSQSVSDDLELVAFSTESPQKTIAPRQTTSMPPKLKTPHSrmpakePVPKEPLHTTSKP 949
Cdd:PTZ00449 738 DPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDS------PSEHEDKPPGDHP 811
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 950 KMPPSPEVADTTSVPKDErlsLKPDPEVTHSETVLPPVTFRVEPPKTTIAPLEtrgipLIPVISPRPSQEELQTAMEETD 1029
Cdd:PTZ00449 812 SLPKKRHRLDGLALSTTD---LESDAGRIAKDASGKIVKLKRSKSFDDLTTVE-----EAEEMGAEARKIVVDDDGTEAD 883
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 568995630 1030 QstqelfttkiprttelaKTTQAPHRLHTAPVRPRIPGRPHGRPALNKTTTRPDK 1084
Cdd:PTZ00449 884 D-----------------EDTHPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPKK 921
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
531-837 |
1.25e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 531 PSAQTTKAPRKTKKPGHHRlrrpKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPqvkPAHEPVTF 610
Cdd:PHA03247 255 PAPPPVVGEGADRAPETAR----GATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPA---PAGDAEEE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 611 GSEAPALAIVTttdiePVitrtkasvttlapkpPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRp 690
Cdd:PHA03247 328 DDEDGAMEVVS-----PL---------------PRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRR- 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 691 rpkpqTTPHPEVPHTiLVPATSLEPFIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDP 770
Cdd:PHA03247 387 -----SARHAATPFA-RGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATE 460
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568995630 771 VTTIAPK--TPK-----RTRRPRPKPQTTPTPETPLTKPVAATDLEPSALSTEVPATVVLATALTPVTLRTKAP 837
Cdd:PHA03247 461 PAPDDPDdaTRKaldalRERRPPEPPGADLAELLGRHPDTAGTVVRLAAREAAIAREVAECSRLTINALRSPFP 534
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
420-747 |
1.29e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.54 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 420 SRVVQPQTATYDVI---------SSSTTSDETEIEIHTATRDPILDSVPPKTSRTA-EQPRATLAPIEALFESRNVeIFT 489
Cdd:PRK10263 297 NRATQPEYDEYDPLlngapitepVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPpAQPTVAWQPVPGPQTGEPV-IAP 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 490 SPEVRPTTAAPQQTTSIPSTPKRQSTP--KPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:PRK10263 376 APEGYPQQSQYAQPAVQYNEPLQQPVQpqQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQST 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 568 LEP-ATVTPEILVPKIVPKPP---------QKPKATRRPEVPQVKPAHEPVTFGSEapalaivtttdIEPVITRTKASVT 637
Cdd:PRK10263 456 FAPqSTYQTEQTYQQPAAQEPlyqqpqpveQQPVVEPEPVVEETKPARPPLYYFEE-----------VEEKRAREREQLA 524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 638 TLAPKPPRPrthrqrTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRrprpkpQTTPHPEVPHTILVPATSLepfi 717
Cdd:PRK10263 525 AWYQPIPEP------VKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVK------KATLATGAAATVAAPVFSL---- 588
|
330 340 350
....*....|....*....|....*....|
gi 568995630 718 iteAPGTTLVPKLPQQPDYPHPKPKTTRSP 747
Cdd:PRK10263 589 ---ANSGGPRPQVKEGIGPQLPRPKRIRVP 615
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
458-771 |
1.37e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 458 VPPKTSRTAEQPRATLAP---IEALFESRNVEIFTSPEVRPTTAAPQQTTsIPSTPKRQSTPKP-------PRVKPAPEP 527
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAavgASAVPAVTAVTGAAGAALAPKAAAAAAAT-RAEAPPAAPAPPAtadrgddAADGDAPVP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 528 ---ETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQ--------KPKATRRP 596
Cdd:PRK07003 451 akaNARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAaasredapAAAAPPAP 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 597 EVPQVKPA--HEPVTFGSEAPALAIVTTTDIEPVITRTK--------ASVTTLAPKPPRPRTHRQrtkyktTQSPKIPHS 666
Cdd:PRK07003 531 EARPPTPAaaAPAARAGGAAAALDVLRNAGMRVSSDRGAraaaaakpAAAPAAAPKPAAPRVAVQ------VPTPRARAA 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 667 KPADLGPITSEPPLASTTkkvRRPRPkpqttPHPEVPHTILVPATSLEPFIiteAPGTTLVPKLPQQPDYPHPKPKTTRS 746
Cdd:PRK07003 605 TGDAPPNGAARAEQAAES---RGAPP-----PWEDIPPDDYVPLSADEGFG---GPDDGFVPVFDSGPDDVRVAPKPADA 673
|
330 340
....*....|....*....|....*
gi 568995630 747 PAAsPTELVPTPvfePVTPLkeDPV 771
Cdd:PRK07003 674 PAP-PVDTRPLP---PAIPL--DAI 692
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
490-618 |
1.52e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 490 SPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEV-PKSKPAL 568
Cdd:PRK07994 370 VPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSePAAASRA 449
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 568995630 569 EPATVTPEIL-----VPKIVPKPPQKPKATR-RPEVPQVKPAHEPVTFGSEAPALA 618
Cdd:PRK07994 450 RPVNSALERLasvrpAPSALEKAPAKKEAYRwKATNPVEVKKEPVATPKALKKALE 505
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
909-1160 |
1.68e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.14 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 909 PQKTIAPRQTTSMPPKLKTPhsRMPAKEPVPKEPLhTTSKPKMPPSPEVADTTSVPKDERLSLKPDPEVTHSETVLPPVT 988
Cdd:PTZ00449 569 PSKIPTLSKKPEFPKDPKHP--KDPEEPKKPKRPR-SAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSP 645
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 989 FRVEPPKT--TIAPLETRGIPLIPVISPRPSQEELQTAMEETDQST----QELFTTKIPRTTELAKTTQAPHRLHTAPVR 1062
Cdd:PTZ00449 646 ERPEGPKIikSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTtvvlDESFESILKETLPETPGTPFTTPRPLPPKL 725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1063 PRIPGRPHGRPAlnktttRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPPIPHRhsstR 1142
Cdd:PTZ00449 726 PRDEEFPFEPIG------DPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMK----R 795
|
250
....*....|....*....
gi 568995630 1143 PVSP-ERRPLPPNNVTGKP 1160
Cdd:PTZ00449 796 PDSPsEHEDKPPGDHPSLP 814
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
480-628 |
1.71e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 480 FESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPghhrLRRPKTTRSP 559
Cdd:PRK14950 351 LELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRP----VAPPVPHTPE 426
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568995630 560 EVPKSKPALEPATVTPEILVPkivPKPPQKPKATRRPEV--PQVKPAHEPVT--FGSEAPALAIVTTTDIEPV 628
Cdd:PRK14950 427 SAPKLTRAAIPVDEKPKYTPP---APPKEEEKALIADGDvlEQLEAIWKQILrdVPPRSPAVQALLSSGVRPV 496
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
515-718 |
2.24e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 42.51 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 515 TPKPPRVKPAPEPETRPSAQTTKAPRKTKKP----GHHRL--RRPKTTRSPEVPKSKPALEPATVTPE--ILVPKIVPKP 586
Cdd:PRK14086 87 TVDPSAGEPAPPPPHARRTSEPELPRPGRRPyegyGGPRAddRPPGLPRQDQLPTARPAYPAYQQRPEpgAWPRAADDYG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 587 PQKPKATRRPEVPQVKPAHEPVTFGSEAPALAivtttDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHS 666
Cdd:PRK14086 167 WQQQRLGFPPRAPYASPASYAPEQERDREPYD-----AGRPEYDQRRRDYDHPRPDWDRPRRDRTDRPEPPPGAGHVHRG 241
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 568995630 667 KPADLGPItSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFII 718
Cdd:PRK14086 242 GPGPPERD-DAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKYTFDTFVI 292
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
491-766 |
2.70e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.45 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:pfam03154 172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 571 ATVT--PEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPvtfgseapalaivtttdiepvitrtkasvttlAPKPPRPRT 648
Cdd:pfam03154 252 MTQPppPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQ--------------------------------HPVPPQPFP 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 649 hrqrTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPkPQTTPHPEVPhtilVPATSLEPfiiteaPGTTLVP 728
Cdd:pfam03154 300 ----LTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP-PREQPLPPAP----LSMPHIKP------PPTTPIP 364
|
250 260 270
....*....|....*....|....*....|....*...
gi 568995630 729 KLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPL 766
Cdd:pfam03154 365 QLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL 402
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
467-955 |
2.84e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.36 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 467 EQPRATLAPIEALFESRNVEIFTSPEVRPTTAAPQQTTSIPstpkrQSTPKPPRVKPAPEP-ETRPSAQTTKAPR----- 540
Cdd:PHA03378 345 EAVRLPDDPIIVEDDDESEEIESECDPDEDKSGAEALASIP-----QTLPDPPTVYGRPKVfARKADLKSTKKCRaivtd 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 541 ---------KTKKPGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKP--PQKPKATrrpevPQVKPA--HEP 607
Cdd:PHA03378 420 psvikaieeEHRKKKAARTEQPRATPHSQAPTVVLHRPPTQPLEGPTGPLSVQAPlePWQPLPH-----PQVTPVilHQP 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 608 VTFGSEAP-ALAIVTTTDIEPVITRTKAsvTTLAPKPPRPRTHRqrtkykttqspKIPHSKPADLGPITSEPPLASTTKK 686
Cdd:PHA03378 495 PAQGVQAHgSMLDLLEKDDEDMEQRVMA--TLLPPSPPQPRAGR-----------RAPCVYTEDLDIESDEPASTEPVHD 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 687 VRRPRPKPQttphpevPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDyPHPKPKTTRS--PAASPTELVPTPVFE-PV 763
Cdd:PHA03378 562 QLLPAPGLG-------PLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPS-QTPEPPTTQShiPETSAPRQWPMPLRPiPM 633
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 764 TPLKEDPVTTIAPKTPkrTRRPRPKPQTTPTPETPLTKPVAATDLEPSALSTEVPATVVLATALTPVTLRTKAPktttlA 843
Cdd:PHA03378 634 RPLRMQPITFNVLVFP--TPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMR-----P 706
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 844 PNVQRTRRPHPRpktTASTGVSESKSAPTELQslvlKPVTSPSLEIIQSQSVSDDLELVAFSTESPQKTIAPRQTTSMPP 923
Cdd:PHA03378 707 PAAPPGRAQRPA---AATGRARPPAAAPGRAR----PPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779
|
490 500 510
....*....|....*....|....*....|...
gi 568995630 924 KLKTPHSRM-PAKEPVPKEPlhttskPKMPPSP 955
Cdd:PHA03378 780 PQAPPAPQQrPRGAPTPQPP------PQAGPTS 806
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
428-770 |
2.95e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.34 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 428 ATYDVISSSTTSDETEIEIHTATR-------DPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVR------ 494
Cdd:COG5665 208 STPQAFNASATSGRSQHIVQAAKRvgvewwgDPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntpts 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 495 --------PTTAAPQQTTSIPSTPKRQSTPKPPRV--KPAPEPETRPSAQTTKAPRKTKKPGHhrlrRPKTTRSPEVPKS 564
Cdd:COG5665 288 takaqpqpPTKKQPAKEPPSDTASGNPSAPSVLINsdSPTSEDPATASVPTTEETTAFTTPSS----VPSTPAEKDTPAT 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 565 KPALEPATVTPEILV-PKIVPKPPQKPKATrrpevpqvkpAHEPVTFGSEAPalaivtttdiepvitrtkASVTTLAPKP 643
Cdd:COG5665 364 DLATPVSPTPPETSVdKKVSPDSATSSTKS----------EKEGGTASSPMP------------------PNIAIGAKDD 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 644 PRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLAS--------TTKKVRRPRPKPQTTPHPEVPHTILVPATSLEP 715
Cdd:COG5665 416 VDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAgsdlepenTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANET 495
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 716 FIITEAPGTTLVPKLPQQ--PDYPHPKPKTT---RSPAASPTELVPTPVFEPVTPLKEDP 770
Cdd:COG5665 496 GPPVIRRDSTPSSTADQSivGVLAFGLDQRTqaeISVEAASRSNPLLNSQVKSFPLGKRS 555
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
307-575 |
3.15e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 307 TLALPAESKTPEVEKLAGQPVTVTPESVSRSTKPTLSSALDTAETALVLSEKTSE-TARSVLIPEFELPLSTLAPkrfpe 385
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPAASPAGPLPP----- 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 386 fPEAKTAFPLEKPRGSWASSEEP--WVVPGAKtsedsrvvqpqtatydvISSSTTSDETEIEIHTATRDPILDSVPPKTS 463
Cdd:PHA03247 2831 -PTSAQPTAPPPPPGPPPPSLPLggSVAPGGD-----------------VRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 464 RTAE---QPRATLAPiealfeSRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtrPSAQTTKAPR 540
Cdd:PHA03247 2893 RSTEsfaLPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGE--PSGAVPQPWL 2964
|
250 260 270
....*....|....*....|....*....|....*
gi 568995630 541 KTKKPGHHRLRRpktTRSPEVPKSKPALEPATVTP 575
Cdd:PHA03247 2965 GALVPGRVAVPR---FRVPQPAPSREAPASSTPPL 2996
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
469-600 |
3.24e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 469 PRATLAPIEALfESRNVEIFTSPEVRPT----TAAPQQTTSIPSTPKRQSTPKPPRVkPAPEPETRPSAQTTKAPRKTKK 544
Cdd:PRK07764 371 ERGLLARLERL-ERRLGVAGGAGAPAAAapsaAAAAPAAAPAPAAAAPAAAAAPAPA-AAPQPAPAPAPAPAPPSPAGNA 448
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 568995630 545 PGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPQ 600
Cdd:PRK07764 449 PAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
515-612 |
3.79e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.85 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 515 TPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGhhrlRRPKTTRSPEvpkSKPAlePATVTPeilVPKIVPKPPqKPKATR 594
Cdd:PRK14954 385 AGSPDVKKKAPEPDL-PQPDRHPGPAKPEAPG----ARPAELPSPA---SAPT--PEQQPP---VARSAPLPP-SPQASA 450
|
90
....*....|....*...
gi 568995630 595 RPEVPQVKPAhepVTFGS 612
Cdd:PRK14954 451 PRNVASGKPG---VDLGS 465
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
491-673 |
4.45e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 571 ATVTPEIL---VPKIVPKPPQKPKATRRPEVPQVKPAHE-PVTFGSEAPA------LAIVTTTDIEPVITRTKASVTTLA 640
Cdd:PRK12323 463 RPAAAGPRpvaAAAAAAPARAAPAAAPAPADDDPPPWEElPPEFASPAPAqpdaapAGWVAESIPDPATADPDDAFETLA 542
|
170 180 190
....*....|....*....|....*....|...
gi 568995630 641 PKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGP 673
Cdd:PRK12323 543 PAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| COG3979 |
COG3979 |
Chitodextrinase [Carbohydrate transport and metabolism]; |
1266-1365 |
5.58e-03 |
|
Chitodextrinase [Carbohydrate transport and metabolism];
Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 40.91 E-value: 5.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 1266 PPQNPpTNLTVVTVEgcPSFVILDWEK-PLNDTVTEYEVisrengsFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPK 1344
Cdd:COG3979 2 APTAP-TGLTASNVT--SSSVSLSWDAsTDNVGVTGYDV-------YRGGDQVATVTGLTAWTVTGLTPGTEYTFTVGAC 71
|
90 100
....*....|....*....|.
gi 568995630 1345 nplgeGPASNTVAFSTESADP 1365
Cdd:COG3979 72 -----DAAGNVSAASGTSTAM 87
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
623-965 |
7.62e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 7.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 623 TDIEPVITRTKASVTTLAPKPP-----RPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPlasttkkvrRPRPKPQTT 697
Cdd:PHA03307 51 AAVTVVAGAAACDRFEPPTGPPpgpgtEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPS---------SPDPPPPTP 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 698 PHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIAPK 777
Cdd:PHA03307 122 PPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAA 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 778 TPKRTRRPRPKPQTTPTPETPLTKPVAATDLEPSA---LSTEVPATVVLATALTPV----TLRTKAPKTTTLAPNVQRTR 850
Cdd:PHA03307 202 ASPRPPRRSSPISASASSPAPAPGRSAADDAGASSsdsSSSESSGCGWGPENECPLprpaPITLPTRIWEASGWNGPSSR 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 851 RPHPRPkttaSTGVSESKSAPTELQSLVLKPVTSPSLEIIQSQSVSDDLELVAFSTESPQKTIAPRqttsmppklKTPHS 930
Cdd:PHA03307 282 PGPASS----SSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSP---------GPSPS 348
|
330 340 350
....*....|....*....|....*....|....*
gi 568995630 931 RMPAKEPvPKEPLHTTSKPKMPPSPEVADTTSVPK 965
Cdd:PHA03307 349 RSPSPSR-PPPPADPSSPRKRPRPSRAPSSPAASA 382
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
471-748 |
8.25e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 40.68 E-value: 8.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 471 ATLAPIEALFESrnveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtRPSAQttkAPRKTKKPGHHRL 550
Cdd:PLN03209 311 APLTPMEELLAK-------IPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPP-QPKAV---VPRPLSPYTAYED 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 551 RRPKTTRSPEVPKSKPA----------LEPATVTPEILVPKIVP--KPPQKPKATRRPEVPQVK-PAHEPVTFGSEAPAL 617
Cdd:PLN03209 380 LKPPTSPIPTPPSSSPAssksvdavakPAEPDVVPSPGSASNVPevEPAQVEAKKTRPLSPYARyEDLKPPTSPSPTAPT 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 618 AIVTTTDIEPVITRT------KASVTTLAPKPPRPRthrqrtkykttqsPKIPHSKPADLGPITSEPPLAsttkkvrrPR 691
Cdd:PLN03209 460 GVSPSVSSTSSVPAVpdtapaTAATDAAAPPPANMR-------------PLSPYAVYDDLKPPTSPSPAA--------PV 518
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568995630 692 PKPQTTPHPEVPhtilvPATSLEPFIITEAPGTTLVPKlpQQPDYPHP-----KPKTTRSPA 748
Cdd:PLN03209 519 GKVAPSSTNEVV-----KVGNSAPPTALADEQHHAQPK--PRPLSPYTmyedlKPPTSPTPS 573
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
606-1073 |
9.05e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.84 E-value: 9.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 606 EPVTfgsEAPALAIVTTTDIEPVIT-RTKASVTTLAPK-PPRPRTHRQRTKYKttqSPKIPHSKPADlGPITSEPPLAST 683
Cdd:PRK10263 338 EPVT---QTPPVASVDVPPAQPTVAwQPVPGPQTGEPViAPAPEGYPQQSQYA---QPAVQYNEPLQ-QPVQPQQPYYAP 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 684 TKKVRRPRPKPQTTPHPEVPHTILVPATS---LEPFIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVF 760
Cdd:PRK10263 411 AAEQPAQQPYYAPAPEQPAQQPYYAPAPEqpvAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVV 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 761 EPVTPLKE-----DPVTTIAPKTPKRTRR------------PRPKPQTTPTPETPLTKPVAATDLEPSALSTEVPATVVL 823
Cdd:PRK10263 491 EPEPVVEEtkparPPLYYFEEVEEKRAREreqlaawyqpipEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKK 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 824 ATALTPVTLRTKAPKTTTLA-----PNVQRTRRPH-PRPKTTASTGVSESKSAPTEL--QSLVLKPVTSPSLEIIQSQSV 895
Cdd:PRK10263 571 ATLATGAAATVAAPVFSLANsggprPQVKEGIGPQlPRPKRIRVPTRRELASYGIKLpsQRAAEEKAREAQRNQYDSGDQ 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 896 SDDLELVAFSTESPQKTIAPRQTTSMPPKLKTPHSRMPAKEPVPKEP------LHTTSKPKMPPSPEVADTTSVPKDERL 969
Cdd:PRK10263 651 YNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAelarqfAQTQQQRYSGEQPAGANPFSLDDFEFS 730
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 970 SLKPDPEVTHSETVLPPVTFRVEPPKTTIAPLETRGIPLIPViSPRPSQEELQTAMEETDQSTQELFTTKIPRTTELAKT 1049
Cdd:PRK10263 731 PMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPV-APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQ 809
|
490 500
....*....|....*....|....
gi 568995630 1050 TQAPHRLHTAPVRPRIPGRPHGRP 1073
Cdd:PRK10263 810 PVAPQPQYQQPQQPVAPQPQYQQP 833
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
451-539 |
9.14e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.60 E-value: 9.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 451 RDPIlDSVPPKTSRTAEQP--------RATLAPIEALFESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVK 522
Cdd:PRK11633 50 RDEP-DMMPAATQALPTQPpegaaeavRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAP 128
|
90
....*....|....*..
gi 568995630 523 PAPEPETRPSAQTTKAP 539
Cdd:PRK11633 129 PAPKPEPKPVVEEKAAP 145
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
833-1016 |
9.88e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.63 E-value: 9.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 833 RTKAPKTTTLAPNVQRTRRPHPRPKTTASTGVSESKSAPTELQSLVLKPVTSPSLEIIQSQSVSDDLELVAFSTESPQKT 912
Cdd:PRK12323 376 TAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995630 913 IAPRQTTSMPPKLKTPHSRMPAKEPVPKEPLHTTSK-----------PKMPPSPEVADTTSVPKDERLSLKPDPevthsE 981
Cdd:PRK12323 456 AAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPadddpppweelPPEFASPAPAQPDAAPAGWVAESIPDP-----A 530
|
170 180 190
....*....|....*....|....*....|....*
gi 568995630 982 TVLPPVTFRVEPPKTTIAPLETRGIPLIPVISPRP 1016
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| |
