NCBI Conserved Domain Search

Conserved domains on [gi|568967910|ref|XP_006513877|]

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calcyphosin-2 isoform X3 [Mus musculus]

Protein Classification

EF-hand domain-containing protein( domain architecture ID 1000101)

EF-hand (EFh) domain-containing protein may be involved in binding intracellular calcium and in calcium signal transduction

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

FRQ1 super family

cl34916

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];

426-526

6.90e-04

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];

The actual alignment was detected with superfamily member COG5126:

Pssm-ID: 444056 [Multi-domain] Cd Length: 137 Bit Score: 40.16 E-value: 6.90e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568967910 426 LGRYFQGLDKEGNGLLEKADFQQAlktfhlevseqdFESFW--LILQGYGHSKNKVDYGEFKRAIFGEMNEYRKSFVRKA 503
Cdd:COG5126    7 LDRRFDLLDADGDGVLERDDFEAL------------FRRLWatLFSEADTDGDGRISREEFVAGMESLFEATVEPFARAA 74

                         90       100
                 ....*....|....*....|...
gi 568967910 504 FMQLDFNKTGIVSVIDIRKCYCA 526
Cdd:COG5126   75 FDLLDTDGDGKISADEFRRLLTA 97

Name

Accession

Description

Interval

E-value

FRQ1

COG5126

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];

426-526

6.90e-04

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];

Pssm-ID: 444056 [Multi-domain] Cd Length: 137 Bit Score: 40.16 E-value: 6.90e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568967910 426 LGRYFQGLDKEGNGLLEKADFQQAlktfhlevseqdFESFW--LILQGYGHSKNKVDYGEFKRAIFGEMNEYRKSFVRKA 503
Cdd:COG5126    7 LDRRFDLLDADGDGVLERDDFEAL------------FRRLWatLFSEADTDGDGRISREEFVAGMESLFEATVEPFARAA 74

                         90       100
                 ....*....|....*....|...
gi 568967910 504 FMQLDFNKTGIVSVIDIRKCYCA 526
Cdd:COG5126   75 FDLLDTDGDGKISADEFRRLLTA 97

Name

Accession

Description

Interval

E-value

FRQ1

COG5126

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];

426-526

6.90e-04

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];

Pssm-ID: 444056 [Multi-domain] Cd Length: 137 Bit Score: 40.16 E-value: 6.90e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568967910 426 LGRYFQGLDKEGNGLLEKADFQQAlktfhlevseqdFESFW--LILQGYGHSKNKVDYGEFKRAIFGEMNEYRKSFVRKA 503
Cdd:COG5126    7 LDRRFDLLDADGDGVLERDDFEAL------------FRRLWatLFSEADTDGDGRISREEFVAGMESLFEATVEPFARAA 74

                         90       100
                 ....*....|....*....|...
gi 568967910 504 FMQLDFNKTGIVSVIDIRKCYCA 526
Cdd:COG5126   75 FDLLDTDGDGKISADEFRRLLTA 97

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01