mitochondrial assembly of ribosomal large subunit protein 1 isoform X2 [Mus musculus]
RsfS/YbeB/iojap family protein( domain architecture ID 10493352)
RsfS/YbeB/iojap family protein similar to Arabidopsis thaliana chloroplastic protein Iojap and fungal mitochondrial ATPase synthesis protein 25
List of domain hits
Name | Accession | Description | Interval | E-value | |||
RsfS | pfam02410 | Ribosomal silencing factor during starvation; This family is expressed by almost all bacterial ... |
89-188 | 4.76e-38 | |||
Ribosomal silencing factor during starvation; This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases. : Pssm-ID: 460550 Cd Length: 97 Bit Score: 128.33 E-value: 4.76e-38
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Name | Accession | Description | Interval | E-value | |||
RsfS | pfam02410 | Ribosomal silencing factor during starvation; This family is expressed by almost all bacterial ... |
89-188 | 4.76e-38 | |||
Ribosomal silencing factor during starvation; This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases. Pssm-ID: 460550 Cd Length: 97 Bit Score: 128.33 E-value: 4.76e-38
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RsfS | COG0799 | Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ... |
100-188 | 5.13e-27 | |||
Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ribosomal structure and biogenesis]; Pssm-ID: 440562 Cd Length: 113 Bit Score: 100.19 E-value: 5.13e-27
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rsfS_iojap_ybeB | TIGR00090 | ribosome silencing factor RsfS/YbeB/iojap; This model describes a widely distributed family of ... |
88-188 | 7.19e-27 | |||
ribosome silencing factor RsfS/YbeB/iojap; This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes RsfS(YbeB) from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. The conserved function of this protein is to silence ribosomes by binding the ribosomal large subunit and impairing joining with the small subunit in response to nutrient stress. Note that RsfS (starvation) is an author-endorsed change from the published symbol RsfA, which conflicted with previously published gene symbols. [Protein synthesis, Translation factors] Pssm-ID: 272901 Cd Length: 99 Bit Score: 99.46 E-value: 7.19e-27
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PRK11538 | PRK11538 | ribosome silencing factor; |
89-189 | 3.30e-18 | |||
ribosome silencing factor; Pssm-ID: 183184 Cd Length: 105 Bit Score: 77.14 E-value: 3.30e-18
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Name | Accession | Description | Interval | E-value | |||
RsfS | pfam02410 | Ribosomal silencing factor during starvation; This family is expressed by almost all bacterial ... |
89-188 | 4.76e-38 | |||
Ribosomal silencing factor during starvation; This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases. Pssm-ID: 460550 Cd Length: 97 Bit Score: 128.33 E-value: 4.76e-38
|
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RsfS | COG0799 | Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ... |
100-188 | 5.13e-27 | |||
Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ribosomal structure and biogenesis]; Pssm-ID: 440562 Cd Length: 113 Bit Score: 100.19 E-value: 5.13e-27
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rsfS_iojap_ybeB | TIGR00090 | ribosome silencing factor RsfS/YbeB/iojap; This model describes a widely distributed family of ... |
88-188 | 7.19e-27 | |||
ribosome silencing factor RsfS/YbeB/iojap; This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes RsfS(YbeB) from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. The conserved function of this protein is to silence ribosomes by binding the ribosomal large subunit and impairing joining with the small subunit in response to nutrient stress. Note that RsfS (starvation) is an author-endorsed change from the published symbol RsfA, which conflicted with previously published gene symbols. [Protein synthesis, Translation factors] Pssm-ID: 272901 Cd Length: 99 Bit Score: 99.46 E-value: 7.19e-27
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PRK11538 | PRK11538 | ribosome silencing factor; |
89-189 | 3.30e-18 | |||
ribosome silencing factor; Pssm-ID: 183184 Cd Length: 105 Bit Score: 77.14 E-value: 3.30e-18
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Blast search parameters | ||||
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