|
Name |
Accession |
Description |
Interval |
E-value |
| COG5139 |
COG5139 |
Uncharacterized conserved protein [Function unknown]; |
473-737 |
5.25e-29 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 227468 Cd Length: 397 Bit Score: 120.19 E-value: 5.25e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 473 DFEMMLQRKKSMCGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETF 552
Cdd:COG5139 126 ELGDTGDRQLKAPAASRARRKEDLLEQTVDEISLRLKKRMQDAAKKDNANNLEGRPATGKIKNLPEVSDVLMKKALQDTI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 553 IDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPsVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSR 632
Cdd:COG5139 206 LDNNILDSVRGWLEPLPDKSLPNIKIQKSLLDVLKTLP-IHTEHLVESGVGRIVYFYTISKKEEKEVRRSAKALVQEWTR 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 633 PIFGLTSNYKGmTREEREQRDLEQMPQRRRMSSTGGQTpRRDLEKVLTGEEKALRPGDPGFCARARV---PMPSNKDYVV 709
Cdd:COG5139 285 PIIKPSGNYRD-KRIMQLEFDSEKLRKKSVMDSAKNRK-KKSSGEDPTSRGSSVQTLYEQAAARRNRaaaPAQTTTDYKY 362
|
250 260 270
....*....|....*....|....*....|....*
gi 564393048 710 RP-------KWNVEMESSRFQATSKKGISRLDKQM 737
Cdd:COG5139 363 APvsnlsavPTNARAVGVGSTLNNSEMYKRLTSRL 397
|
|
| Med26 |
pfam08711 |
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is ... |
581-634 |
4.26e-12 |
|
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is conserved from plants to fungi to humans - the number and representation of individual subunits varying with species {1-2]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Mediator exists in two major forms in human cells: a smaller form that interacts strongly with pol II and activates transcription, and a large form that does not interact strongly with pol II and does not directly activate transcription. Notably, the 'small' and 'large' Mediator complexes differ in their subunit composition: the Med26 subunit preferentially associates with the small, active complex, whereas cdk8, cyclin C, Med12 and Med13 associate with the large Mediator complex. This family includesthe C terminal region of a number of eukaryotic hypothetical proteins which are homologous to the Saccharomyces cerevisiae protein IWS1. IWS1 is known to be an Pol II transcription elongation factor and interacts with Spt6 and Spt5.
Pssm-ID: 462573 [Multi-domain] Cd Length: 52 Bit Score: 61.38 E-value: 4.26e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 564393048 581 ELLKILQELPsVSQETLKHSGIGRAVMYLYKHPkESRSNKDMAGKLINEWSRPI 634
Cdd:pfam08711 1 KLLKKLEKLP-VTLELLKSTGIGKVVNKLRKHK-ENPEIKKLAKELVKKWKRLV 52
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
18-351 |
2.27e-11 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 67.63 E-value: 2.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 18 PVQDERDSGSDGEDDVNEQHSGSDTGSvDRHSENETSDREDGLTKIHNGTDSENDEPSNvhaSDSESEElhrpkDSDSES 97
Cdd:NF033609 558 PEDSDSDPGSDSGSDSSNSDSGSDSGS-DSTSDSGSDSASDSDSASDSDSASDSDSASD---SDSASDS-----DSASDS 628
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 98 EEHAES-PASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETE-DTLQPQGSESDSE-DPPRPQASDSES 174
Cdd:NF033609 629 DSASDSdSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDsDSDSDSDSDSDS 708
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 175 EEPPKpriSDSESEelpkpriSDSESE-DPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEelpkprvSDSESe 253
Cdd:NF033609 709 DSDSD---SDSDSD-------SDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDS- 770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 254 DPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKIDSDDDGEKEGDEKV 333
Cdd:NF033609 771 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 850
|
330
....*....|....*...
gi 564393048 334 AKRKAAVLSDSEDEDKAS 351
Cdd:NF033609 851 DSDSDSESDSNSDSESGS 868
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
2-351 |
1.85e-08 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 58.00 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 2 DSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNvhaSD 81
Cdd:NF033609 589 DSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSD---SD 665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 82 SESEElHRPKDSDSESEEHAESPA-SDSENEAVHQQGSDSEKEEllnghASDSEKEEGRKHAASDSETEDTLQPQGSESD 160
Cdd:NF033609 666 SDSDS-DSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDS-----DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 161 SEDPPRPQASDSESEEPPKPRISDSESEelpkpriSDSESEDPprpqvSDSESEELPKPRVSDSESEDPPRPQASDSESE 240
Cdd:NF033609 740 SDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 807
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 241 elpkprvSDSESEdpqkgpaSDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKI- 319
Cdd:NF033609 808 -------SDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVv 873
|
330 340 350
....*....|....*....|....*....|....
gi 564393048 320 --DSDDDGEKEGDEKVAKRKAAVLSDSEDEDKAS 351
Cdd:NF033609 874 ppNSPKNGTNASNKNEAKDSKEPLPDTGSEDEAN 907
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
149-462 |
1.58e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.92 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 149 EDTLQPQGSESDSEDPPRPQASDSESEEPPKPRiSDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESED 228
Cdd:NF033609 559 EDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSG-SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 637
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 229 PPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSD 308
Cdd:NF033609 638 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 309 SEEEEPKRQKIDSDDDGEKEGD-EKVAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSDVVSDKSGKREKTVASDSEEE 387
Cdd:NF033609 718 SDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 797
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564393048 388 VGKEESSVKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDDNI 462
Cdd:NF033609 798 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNV 872
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
82-331 |
7.52e-07 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 53.13 E-value: 7.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 82 SESEELHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTlqpqGSESDS 161
Cdd:PTZ00108 1150 KEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSN----SSGSDQ 1225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 162 EDPPRPQASDSESEEPPKPRISDSESEElpkpriSDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPrpqasdseSEE 241
Cdd:PTZ00108 1226 EDDEEQKTKPKKSSVKRLKSKKNNSSKS------SEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPP--------SKR 1291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 242 LPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADR------KGLHSSDSEEEEPK 315
Cdd:PTZ00108 1292 PDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRllrrprKKKSDSSSEDDDDS 1371
|
250
....*....|....*.
gi 564393048 316 RQKIDSDDDGEKEGDE 331
Cdd:PTZ00108 1372 EVDDSEDEDDEDDEDD 1387
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
157-450 |
8.20e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 52.69 E-value: 8.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 157 SESDSEDPPRPQASDSESEEPPKprisdseSEELPKPRISDSESEDPPRPQ-VSDSESE-ELPKPRVSDSESEDPPRPQA 234
Cdd:TIGR00927 631 SKGDVAEAEHTGERTGEEGERPT-------EAEGENGEESGGEAEQEGETEtKGENESEgEIPAERKGEQEGEGEIEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 235 SDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEp 314
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGE- 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 315 krqkIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSdvvsdksGKREKTVASDSEEEVGKEESS 394
Cdd:TIGR00927 783 ----IQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKD-------ETGEQELNAENQGEAKQDEKG 851
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 564393048 395 VKKSEEKDlfGSDSESGNEEENliadifgESGDEEEEEftgfNQEDLEEEKNETQL 450
Cdd:TIGR00927 852 VDGGGGSD--GGDSEEEEEEEE-------EEEEEEEEE----EEEEEEEEENEEPL 894
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
156-473 |
2.46e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 51.06 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 156 GSESDSEDPPRPQASDSESEEPPKPRISDSESEelpkpriSDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQAS 235
Cdd:NF033609 534 GSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPG-------SDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDS 606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 236 DSESEELPKprvSDSESE-DPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEP 314
Cdd:NF033609 607 ASDSDSASD---SDSASDsDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 683
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 315 KRQKIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSrvisdADDSDSDVVSDKSGKREKTVASDSEEEVGKEESS 394
Cdd:NF033609 684 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-----DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 758
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564393048 395 VKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDDNIKRGKHMDFLSD 473
Cdd:NF033609 759 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 837
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
11-260 |
1.23e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.53 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 11 SDDGGATPV-QDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTD---SENDEPSNVHASDSESEE 86
Cdd:pfam03154 27 SPDGRASPTnEDLRSSGRNSPSAASTSSNDSKAESMKKSSKKIKEEAPSPLKSAKRQREkgaSDTEEPERATAKKSKTQE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 87 LHRPkdsDSESEEHAESpasdSENEAVHQQGSdSEKEELLNGHASDSEKEEGRKHAASDSET---EDTLQPQGSESDSED 163
Cdd:pfam03154 107 ISRP---NSPSEGEGES----SDGRSVNDEGS-SDPKDIDQDNRSTSPSIPSPQDNESDSDSsaqQQILQTQPPVLQAQS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 164 PPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSeseelPKPRVSDSESEDPPRPQASDSESEELP 243
Cdd:pfam03154 179 GAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAA-----PHTLIQQTPTLHPQRLPSPHPPLQPMT 253
|
250
....*....|....*..
gi 564393048 244 KPRVSDSESEDPQKGPA 260
Cdd:pfam03154 254 QPPPPSQVSPQPLPQPS 270
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
7-461 |
2.35e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 41.54 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 7 SGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSvdrhsENETSDREDGLTKIHNGTDSENDEPSNVHASDSESEE 86
Cdd:COG5271 552 DADETDEPEATAEEDEPDEAEAETEDATENADADETEE-----SADESEEAEASEDEAAEEEEADDDEADADADGAADEE 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 87 LHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTL--QPQGSESDSEDP 164
Cdd:COG5271 627 ETEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASddEEETEEADEDAE 706
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 165 PRPQASDSESEEPPKPRISDSESEELPKPriSDSESEDPPRPQVSDSESEELPKPRVSDSESedpprpQASDSESEELPK 244
Cdd:COG5271 707 TASEEADAEEADTEADGTAEEAEEAAEEA--ESADEEAASLPDEADAEEEAEEAEEAEEDDA------DGLEEALEEEKA 778
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 245 PRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKIDSDDD 324
Cdd:COG5271 779 DAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDV 858
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 325 GEKEGDekvAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSDVVSDKSGKREKTVASDSEEEVGKEESSVKKSEEKDLF 404
Cdd:COG5271 859 DADLDL---DADLAADEHEAEEAQEAETDADADADAGEADSSGESSAAAEDDDAAEDADSDDGANDEDDDDDAEEERKDA 935
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 564393048 405 GSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDDN 461
Cdd:COG5271 936 EEDELGAAEDDLDALALDEAGDEESDDAAADDAGDDSLADDDEALADAADDAEADDS 992
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| COG5139 |
COG5139 |
Uncharacterized conserved protein [Function unknown]; |
473-737 |
5.25e-29 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 227468 Cd Length: 397 Bit Score: 120.19 E-value: 5.25e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 473 DFEMMLQRKKSMCGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETF 552
Cdd:COG5139 126 ELGDTGDRQLKAPAASRARRKEDLLEQTVDEISLRLKKRMQDAAKKDNANNLEGRPATGKIKNLPEVSDVLMKKALQDTI 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 553 IDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPsVSQETLKHSGIGRAVMYLYKHPKESRSNKDMAGKLINEWSR 632
Cdd:COG5139 206 LDNNILDSVRGWLEPLPDKSLPNIKIQKSLLDVLKTLP-IHTEHLVESGVGRIVYFYTISKKEEKEVRRSAKALVQEWTR 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 633 PIFGLTSNYKGmTREEREQRDLEQMPQRRRMSSTGGQTpRRDLEKVLTGEEKALRPGDPGFCARARV---PMPSNKDYVV 709
Cdd:COG5139 285 PIIKPSGNYRD-KRIMQLEFDSEKLRKKSVMDSAKNRK-KKSSGEDPTSRGSSVQTLYEQAAARRNRaaaPAQTTTDYKY 362
|
250 260 270
....*....|....*....|....*....|....*
gi 564393048 710 RP-------KWNVEMESSRFQATSKKGISRLDKQM 737
Cdd:COG5139 363 APvsnlsavPTNARAVGVGSTLNNSEMYKRLTSRL 397
|
|
| Med26 |
pfam08711 |
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is ... |
581-634 |
4.26e-12 |
|
TFIIS helical bundle-like domain; Mediator is a large complex of up to 33 proteins that is conserved from plants to fungi to humans - the number and representation of individual subunits varying with species {1-2]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Mediator exists in two major forms in human cells: a smaller form that interacts strongly with pol II and activates transcription, and a large form that does not interact strongly with pol II and does not directly activate transcription. Notably, the 'small' and 'large' Mediator complexes differ in their subunit composition: the Med26 subunit preferentially associates with the small, active complex, whereas cdk8, cyclin C, Med12 and Med13 associate with the large Mediator complex. This family includesthe C terminal region of a number of eukaryotic hypothetical proteins which are homologous to the Saccharomyces cerevisiae protein IWS1. IWS1 is known to be an Pol II transcription elongation factor and interacts with Spt6 and Spt5.
Pssm-ID: 462573 [Multi-domain] Cd Length: 52 Bit Score: 61.38 E-value: 4.26e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 564393048 581 ELLKILQELPsVSQETLKHSGIGRAVMYLYKHPkESRSNKDMAGKLINEWSRPI 634
Cdd:pfam08711 1 KLLKKLEKLP-VTLELLKSTGIGKVVNKLRKHK-ENPEIKKLAKELVKKWKRLV 52
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
18-351 |
2.27e-11 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 67.63 E-value: 2.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 18 PVQDERDSGSDGEDDVNEQHSGSDTGSvDRHSENETSDREDGLTKIHNGTDSENDEPSNvhaSDSESEElhrpkDSDSES 97
Cdd:NF033609 558 PEDSDSDPGSDSGSDSSNSDSGSDSGS-DSTSDSGSDSASDSDSASDSDSASDSDSASD---SDSASDS-----DSASDS 628
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 98 EEHAES-PASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETE-DTLQPQGSESDSE-DPPRPQASDSES 174
Cdd:NF033609 629 DSASDSdSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDsDSDSDSDSDSDS 708
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 175 EEPPKpriSDSESEelpkpriSDSESE-DPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEelpkprvSDSESe 253
Cdd:NF033609 709 DSDSD---SDSDSD-------SDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDS- 770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 254 DPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKIDSDDDGEKEGDEKV 333
Cdd:NF033609 771 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 850
|
330
....*....|....*...
gi 564393048 334 AKRKAAVLSDSEDEDKAS 351
Cdd:NF033609 851 DSDSDSESDSNSDSESGS 868
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
2-351 |
1.85e-08 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 58.00 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 2 DSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNvhaSD 81
Cdd:NF033609 589 DSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSD---SD 665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 82 SESEElHRPKDSDSESEEHAESPA-SDSENEAVHQQGSDSEKEEllnghASDSEKEEGRKHAASDSETEDTLQPQGSESD 160
Cdd:NF033609 666 SDSDS-DSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDS-----DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 161 SEDPPRPQASDSESEEPPKPRISDSESEelpkpriSDSESEDPprpqvSDSESEELPKPRVSDSESEDPPRPQASDSESE 240
Cdd:NF033609 740 SDSDSDSDSDSDSDSDSDSDSDSDSDSD-------SDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 807
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 241 elpkprvSDSESEdpqkgpaSDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKI- 319
Cdd:NF033609 808 -------SDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVv 873
|
330 340 350
....*....|....*....|....*....|....
gi 564393048 320 --DSDDDGEKEGDEKVAKRKAAVLSDSEDEDKAS 351
Cdd:NF033609 874 ppNSPKNGTNASNKNEAKDSKEPLPDTGSEDEAN 907
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
149-462 |
1.58e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.92 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 149 EDTLQPQGSESDSEDPPRPQASDSESEEPPKPRiSDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESED 228
Cdd:NF033609 559 EDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSG-SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 637
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 229 PPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSD 308
Cdd:NF033609 638 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 309 SEEEEPKRQKIDSDDDGEKEGD-EKVAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSDVVSDKSGKREKTVASDSEEE 387
Cdd:NF033609 718 SDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 797
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564393048 388 VGKEESSVKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDDNI 462
Cdd:NF033609 798 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNV 872
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
82-331 |
7.52e-07 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 53.13 E-value: 7.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 82 SESEELHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTlqpqGSESDS 161
Cdd:PTZ00108 1150 KEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSN----SSGSDQ 1225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 162 EDPPRPQASDSESEEPPKPRISDSESEElpkpriSDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPrpqasdseSEE 241
Cdd:PTZ00108 1226 EDDEEQKTKPKKSSVKRLKSKKNNSSKS------SEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPP--------SKR 1291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 242 LPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADR------KGLHSSDSEEEEPK 315
Cdd:PTZ00108 1292 PDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRllrrprKKKSDSSSEDDDDS 1371
|
250
....*....|....*.
gi 564393048 316 RQKIDSDDDGEKEGDE 331
Cdd:PTZ00108 1372 EVDDSEDEDDEDDEDD 1387
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
157-450 |
8.20e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 52.69 E-value: 8.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 157 SESDSEDPPRPQASDSESEEPPKprisdseSEELPKPRISDSESEDPPRPQ-VSDSESE-ELPKPRVSDSESEDPPRPQA 234
Cdd:TIGR00927 631 SKGDVAEAEHTGERTGEEGERPT-------EAEGENGEESGGEAEQEGETEtKGENESEgEIPAERKGEQEGEGEIEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 235 SDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEp 314
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGE- 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 315 krqkIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSdvvsdksGKREKTVASDSEEEVGKEESS 394
Cdd:TIGR00927 783 ----IQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKD-------ETGEQELNAENQGEAKQDEKG 851
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 564393048 395 VKKSEEKDlfGSDSESGNEEENliadifgESGDEEEEEftgfNQEDLEEEKNETQL 450
Cdd:TIGR00927 852 VDGGGGSD--GGDSEEEEEEEE-------EEEEEEEEE----EEEEEEEEENEEPL 894
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
156-473 |
2.46e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 51.06 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 156 GSESDSEDPPRPQASDSESEEPPKPRISDSESEelpkpriSDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQAS 235
Cdd:NF033609 534 GSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPG-------SDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDS 606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 236 DSESEELPKprvSDSESE-DPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEP 314
Cdd:NF033609 607 ASDSDSASD---SDSASDsDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 683
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 315 KRQKIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSrvisdADDSDSDVVSDKSGKREKTVASDSEEEVGKEESS 394
Cdd:NF033609 684 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-----DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 758
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564393048 395 VKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDDNIKRGKHMDFLSD 473
Cdd:NF033609 759 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 837
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
47-289 |
3.19e-06 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 50.82 E-value: 3.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 47 RHSENETSDREDGLTKIHNGTDSENDEPSNVHASDSESEELHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEEll 126
Cdd:PTZ00108 1156 QRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKT-- 1233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 127 nGHASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPPR--PQASDSESEEPPKPrisdseSEELPKPRISDSESEDPP 204
Cdd:PTZ00108 1234 -KPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKnaPKRVSAVQYSPPPP------SKRPDGESNGGSKPSSPT 1306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 205 RPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASrhkEKPESEDSDGEN 284
Cdd:PTZ00108 1307 KKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDS---EVDDSEDEDDED 1383
|
....*
gi 564393048 285 KREDS 289
Cdd:PTZ00108 1384 DEDDD 1388
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
50-297 |
4.01e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 50.46 E-value: 4.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 50 ENETSDREDGLTKihnGTDSENDEPSNvhASDSESEELHRPKDSDSESEEHAESPASDSENEAVHQQGSdsekeellngh 129
Cdd:PTZ00449 500 EEEDSDKHDEPPE---GPEASGLPPKA--PGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGP----------- 563
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 130 asdsekeeGRKHAASDSETEdTLQPQGSEsDSEDPPRPqasdsesEEPPKPRISDSESEELPKPRISDSESEDPPRpQVS 209
Cdd:PTZ00449 564 --------AKEHKPSKIPTL-SKKPEFPK-DPKHPKDP-------EEPKKPKRPRSAQRPTRPKSPKLPELLDIPK-SPK 625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 210 DSESEELPKPRVSDSESEDPPRPQAsdSESEELPKPRVSDSESEDPQ-KGPASDSEAEDASRHKEKPESEDSDGENKRED 288
Cdd:PTZ00449 626 RPESPKSPKRPPPPQRPSSPERPEG--PKIIKSPKPPKSPKPPFDPKfKEKFYDDYLDAAAKSKETKTTVVLDESFESIL 703
|
....*....
gi 564393048 289 SEVQNESDG 297
Cdd:PTZ00449 704 KETLPETPG 712
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
100-355 |
4.64e-06 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 50.17 E-value: 4.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 100 HAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEgrkHAASDSETEDTLQPQGSESDSEDPprpqaSDSESEEPPK 179
Cdd:PRK08581 26 YADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKA---DNNNTSNQDNNDKKFSTIDSSTSD-----SNNIIDFIYK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 180 PRISDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGP 259
Cdd:PRK08581 98 NLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAP 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 260 ASDSEAEDASRHKEKPE--------SEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKIDSDDDGEKEGDE 331
Cdd:PRK08581 178 SSNNTKPSTSNKQPNSPkptqpnqsNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTE 257
|
250 260
....*....|....*....|....
gi 564393048 332 KVAKRKAAVLSDSEDEDKASAKKS 355
Cdd:PRK08581 258 TSNTKNPQLPTQDELKHKSKPAQS 281
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
205-460 |
7.31e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 49.61 E-value: 7.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 205 RPQVSDSESEELPKPRVSDSESEDPPRPQASDSESE-ELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGE 283
Cdd:TIGR00927 619 RPVAKVMALGDLSKGDVAEAEHTGERTGEEGERPTEaEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGE 698
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 284 NKREDSEVQNESDGHADRKGLHSSDseEEEPKRQKIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSRVISDADD 363
Cdd:TIGR00927 699 IEAKEADHKGETEAEEVEHEGETEA--EGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKE 776
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 364 SDSDVVSDKSGKREktVASDSEEEVGKEESSVKKSEEKDLFGSDSES---------GNEEENLIADIFGESGDEEEEEFT 434
Cdd:TIGR00927 777 DEDEGEIQAGEDGE--MKGDEGAEGKVEHEGETEAGEKDEHEGQSETqaddtevkdETGEQELNAENQGEAKQDEKGVDG 854
|
250 260 270
....*....|....*....|....*....|....
gi 564393048 435 GF--------NQEDLEEEKNETQLKEAEDSDSDD 460
Cdd:TIGR00927 855 GGgsdggdseEEEEEEEEEEEEEEEEEEEEEEEE 888
|
|
| PHA03321 |
PHA03321 |
tegument protein VP11/12; Provisional |
161-331 |
1.65e-05 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 223041 [Multi-domain] Cd Length: 694 Bit Score: 48.42 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 161 SEDPPRPQASDSESEEPPKPRISDSESEElpKPRISDSESEDPPRPQVSDSESE--ELPKPRVSDSESEDPPRPQA---S 235
Cdd:PHA03321 427 SRQPPGAPAPRRDNDPPPPPRARPGSTPA--CARRARAQRARDAGPEYVDPLGAlrRLPAGAAPPPEPAAAPSPATyytR 504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 236 DSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRK---GLHSSDSEE- 311
Cdd:PHA03321 505 MGGGPPRLPPRNRATETLRPDWGPPAAAPPEQMEDPYLEPDDDRFDRRDGAAAAATSHPREAPAPDDdpiYEGVSDSEEp 584
|
170 180
....*....|....*....|....
gi 564393048 312 --EEPKRQKI--DSDDDGEKEGDE 331
Cdd:PHA03321 585 vyEEIPTPRVyqNPLPRPMEGAGE 608
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
135-332 |
1.68e-05 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 48.36 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 135 KEEGRKHAASDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESE 214
Cdd:PRK12678 56 KEARGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 215 ELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDSE--AEDASRHKEKPESEDSDGENKREDSEvQ 292
Cdd:PRK12678 136 AARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAerGERGRREERGRDGDDRDRRDRREQGD-R 214
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 564393048 293 NESDGHAD--------RKGLHSSDSEEEEPKRQKIDSDDDGEKEGDEK 332
Cdd:PRK12678 215 REERGRRDggdrrgrrRRRDRRDARGDDNREDRGDRDGDDGEGRGGRR 262
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
128-336 |
1.71e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 128 GHASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDP-PRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRP 206
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAaPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDG 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 207 QVSD------SESEELPKPRVSDSESEDPPRPQASDSESEElPKPRVSDSESEDPQK----GPASDSEAEDASRHKEKPE 276
Cdd:PRK07764 669 WPAKaggaapAAPPPAPAPAAPAAPAGAAPAQPAPAPAATP-PAGQADDPAAQPPQAaqgaSAPSPAADDPVPLPPEPDD 747
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 277 SEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKIDSDDDGEKEGDEKVAKR 336
Cdd:PRK07764 748 PPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
101-318 |
1.73e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 48.04 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 101 AESPASDSENEAVHQQGSDSEKEELLNGhaSDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPKP 180
Cdd:PHA03169 43 AAKPAPPAPTTSGPQVRAVAEQGHRQTE--SDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAEELASGLSP 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 181 RISDSESEElpkpriSDSESEDPPRPQVSDSESEELPkPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPA 260
Cdd:PHA03169 121 ENTSGSSPE------SPASHSPPPSPPSHPGPHEPAP-PESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPP 193
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 564393048 261 SDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKglHSSDSEEEEPKRQK 318
Cdd:PHA03169 194 QSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHED--EPTEPEREGPPFPG 249
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
92-332 |
3.97e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 47.30 E-value: 3.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 92 DSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHA-SDSEKE---EGRKHAASDSETEDTLQPQGSESDSEDPPRP 167
Cdd:TIGR00927 639 EHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGeNESEGEipaERKGEQEGEGEIEAKEADHKGETEAEEVEHE 718
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 168 QASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDS------ESEE 241
Cdd:TIGR00927 719 GETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDgemkgdEGAE 798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 242 LPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEpkrqkiDS 321
Cdd:TIGR00927 799 GKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEE------EE 872
|
250
....*....|.
gi 564393048 322 DDDGEKEGDEK 332
Cdd:TIGR00927 873 EEEEEEEEEEE 883
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
52-525 |
6.26e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 6.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 52 ETSDREDGLTKIHNGTDSENDEPSNVHASDSESEELHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHAS 131
Cdd:PTZ00121 1388 EEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE 1467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 132 DSEKEEGRKHAASDSETEDTLQPQGSESDSE-DPPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSD 210
Cdd:PTZ00121 1468 EAKKADEAKKKAEEAKKADEAKKKAEEAKKKaDEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 211 SE----------SEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPEsEDS 280
Cdd:PTZ00121 1548 ADelkkaeelkkAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELK 1626
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 281 DGENKREDSEVQNESDGHADRKGLHSSDSEEEepkrQKIDSDDDGEKEGDEkvaKRKAAVLSDSEDEDK--ASAKKSRVI 358
Cdd:PTZ00121 1627 KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEE----NKIKAAEEAKKAEED---KKKAEEAKKAEEDEKkaAEALKKEAE 1699
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 359 SDADDSDSDVVSDKSGKREKTVASDSEEEVGKEESSVKKSEEKDLFGSDSESGNEEENLIADIFGESgDEEEEEFTGFNQ 438
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEE-EKKAEEIRKEKE 1778
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 439 EDLEEEKNETQLKEAEDSDSddnikrgKHMDFLSDFEMMLQRKKSmcGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEE 518
Cdd:PTZ00121 1779 AVIEEELDEEDEKRRMEVDK-------KIKDIFDNFANIIEGGKE--GNLVINDSKEMEDSAIKEVADSKNMQLEEADAF 1849
|
....*..
gi 564393048 519 DRQLNNQ 525
Cdd:PTZ00121 1850 EKHKFNK 1856
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
72-464 |
6.47e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 6.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 72 DEPSNVHASDSESEELHRPKDSDSESEEhAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDT 151
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKKADEAKKKAEE-AKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAK 1377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 152 LQPQGSESDSEDPPRPQASDSESEEPPKprisdsESEELPKPRISDSESEDPPRPQVSDSESEELPKpRVSDSESEDPPR 231
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEAKKKAEEDKK------KADELKKAAAAKKKADEAKKKAEEKKKADEAKK-KAEEAKKADEAK 1450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 232 PQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEE 311
Cdd:PTZ00121 1451 KKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 312 EEPKRQKIDSDDDGEKEGDEkvaKRKAAVLSDSEDEDKA-SAKKSRVISDADDSDSDVVSDKSGKREKTVASDSEEEVGK 390
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADE---LKKAEELKKAEEKKKAeEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564393048 391 EESSVKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEftgfnqEDLEEEKNETQLKEAEDSDSDDNIKR 464
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKA------EELKKAEEENKIKAAEEAKKAEEDKK 1675
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
11-260 |
1.23e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.53 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 11 SDDGGATPV-QDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTD---SENDEPSNVHASDSESEE 86
Cdd:pfam03154 27 SPDGRASPTnEDLRSSGRNSPSAASTSSNDSKAESMKKSSKKIKEEAPSPLKSAKRQREkgaSDTEEPERATAKKSKTQE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 87 LHRPkdsDSESEEHAESpasdSENEAVHQQGSdSEKEELLNGHASDSEKEEGRKHAASDSET---EDTLQPQGSESDSED 163
Cdd:pfam03154 107 ISRP---NSPSEGEGES----SDGRSVNDEGS-SDPKDIDQDNRSTSPSIPSPQDNESDSDSsaqQQILQTQPPVLQAQS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 164 PPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSeseelPKPRVSDSESEDPPRPQASDSESEELP 243
Cdd:pfam03154 179 GAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAA-----PHTLIQQTPTLHPQRLPSPHPPLQPMT 253
|
250
....*....|....*..
gi 564393048 244 KPRVSDSESEDPQKGPA 260
Cdd:pfam03154 254 QPPPPSQVSPQPLPQPS 270
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
74-314 |
1.90e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 45.08 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 74 PSNVHASDS----ESEELHRPKDSDSESEEHAESPASDSENEAVhqQGSDSEKEEllnghasdsekeegrkhAASDSETE 149
Cdd:PRK08691 360 PLAAASCDAnaviENTELQSPSAQTAEKETAAKKPQPRPEAETA--QTPVQTASA-----------------AAMPSEGK 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 150 dTLQPQGSESDSEDPPRPQASD-SESEEPPKPRISDSESeelpkpriSDSESEDPPRPQVSdseseelpKPRVSDSESED 228
Cdd:PRK08691 421 -TAGPVSNQENNDVPPWEDAPDeAQTAAGTAQTSAKSIQ--------TASEAETPPENQVS--------KNKAADNETDA 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 229 PPRPQASDSESEELPKPRVSDSES---EDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLH 305
Cdd:PRK08691 484 PLSEVPSENPIQATPNDEAVETETfahEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIG 563
|
....*....
gi 564393048 306 SSDSEEEEP 314
Cdd:PRK08691 564 GNNTPSAPP 572
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
92-349 |
2.23e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.99 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 92 DSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEdtlqpqgSESDSEdpprpQASD 171
Cdd:TIGR00927 629 DLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIP-------AERKGE-----QEGE 696
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 172 SESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSE 251
Cdd:TIGR00927 697 GEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKE 776
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 252 SEDpqkgpASDSEAEDASRHK--EKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEepkrQKIDSDDDGEKEG 329
Cdd:TIGR00927 777 DED-----EGEIQAGEDGEMKgdEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGE----QELNAENQGEAKQ 847
|
250 260
....*....|....*....|.
gi 564393048 330 DEK-VAKRKAAVLSDSEDEDK 349
Cdd:TIGR00927 848 DEKgVDGGGGSDGGDSEEEEE 868
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
153-332 |
2.60e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 153 QPQGSESDSEDPPRPQASDSESEEPPKPRISDSESEELPKPRISDSE-------------SEDPPRPQVSDSESEELPKP 219
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPlapttdpagagepSGAVPQPWLGALVPGRVAVP 2975
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 220 RVSDSESEDP-PRPQASDSESEELPKPRVSDSES-----EDPQKGPASdseaedasrHKEKPESEDSDgenkrEDSEVQN 293
Cdd:PHA03247 2976 RFRVPQPAPSrEAPASSTPPLTGHSLSRVSSWASslalhEETDPPPVS---------LKQTLWPPDDT-----EDSDADS 3041
|
170 180 190
....*....|....*....|....*....|....*....
gi 564393048 294 ESDGHADRKGLHSSDSEEEEPKRQKIDSDDDGEKEGDEK 332
Cdd:PHA03247 3042 LFDSDSERSDLEALDPLPPEPHDPFAHEPDPATPEAGAR 3080
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
2-203 |
3.82e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 2 DSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNVHASD 81
Cdd:TIGR00927 698 EIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKED 777
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 82 SESEELHRPKDSDSESEEHAESPAsdsENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDtlQPQGSESDS 161
Cdd:TIGR00927 778 EDEGEIQAGEDGEMKGDEGAEGKV---EHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQG--EAKQDEKGV 852
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 564393048 162 EDPPRPQASDSESEEPPKPRISDSESEELPKPRiSDSESEDP 203
Cdd:TIGR00927 853 DGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEE-EEEENEEP 893
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
2-203 |
4.30e-04 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 43.62 E-value: 4.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 2 DSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSEND-EPSNVHAS 80
Cdd:PRK08581 104 INQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQkAPSSNNTK 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 81 DSESEELHRPK------DSDSESEEHAESPASDSENEAvhQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTLQ- 153
Cdd:PRK08581 184 PSTSNKQPNSPkptqpnQSNSQPASDDTANQKSSSKDN--QSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSNt 261
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 564393048 154 --PQGSESDSEDPPRPQASDSESEEPPKPRISDSESEELPKprISDSESEDP 203
Cdd:PRK08581 262 knPQLPTQDELKHKSKPAQSFENDVNQSNTRSTSLFETGPS--LSNNDDSGS 311
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
41-314 |
5.94e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.45 E-value: 5.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 41 DTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNVHASDSESEElhRPKDSDSESEEHAESPASDSENEAVHQQGSDS 120
Cdd:TIGR00927 629 DLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETE--TKGENESEGEIPAERKGEQEGEGEIEAKEADH 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 121 EKEEllngHASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPPRPQASDsESEEPPKPRISDSESEELPKPRISDSES 200
Cdd:TIGR00927 707 KGET----EAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKH-EVETEGDRKETEHEGETEAEGKEDEDEG 781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 201 EDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESE-----DPQKGPASDSEAEDASRHKEKP 275
Cdd:TIGR00927 782 EIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEqelnaENQGEAKQDEKGVDGGGGSDGG 861
|
250 260 270
....*....|....*....|....*....|....*....
gi 564393048 276 ESEDSDGENKREDSEVQNESDGHADrkglhssDSEEEEP 314
Cdd:TIGR00927 862 DSEEEEEEEEEEEEEEEEEEEEEEE-------EEENEEP 893
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
161-331 |
6.09e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 43.28 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 161 SEDPPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQvsdseseeLPKPRVSDSESEDPPRPQASDSESE 240
Cdd:PRK14086 92 AGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQ--------LPTARPAYPAYQQRPEPGAWPRAAD 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 241 ELP--KPRVSDSESEDPqkgPASDSEAEDASRHKEKPESEDSDGENKREDsevQNESDGHADRKGLHSSDSEEEEPKRQK 318
Cdd:PRK14086 164 DYGwqQQRLGFPPRAPY---ASPASYAPEQERDREPYDAGRPEYDQRRRD---YDHPRPDWDRPRRDRTDRPEPPPGAGH 237
|
170
....*....|...
gi 564393048 319 IDSDDDGEKEGDE 331
Cdd:PRK14086 238 VHRGGPGPPERDD 250
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
217-447 |
7.01e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.11 E-value: 7.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 217 PKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESD 296
Cdd:PTZ00108 1160 SKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSS 1239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 297 GHADRKglhSSDSEEEEPKRQKIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSRvISDADDSDSDVVSDKSGKR 376
Cdd:PTZ00108 1240 VKRLKS---KKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGES-NGGSKPSSPTKKKVKKRLE 1315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564393048 377 EKTVASDSEEEVGKEESSVKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNE 447
Cdd:PTZ00108 1316 GSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDEDDED 1386
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
22-241 |
7.96e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.11 E-value: 7.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 22 ERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNVHASDSESEELHRPKDSDSESEEHA 101
Cdd:PTZ00108 1178 EKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDN 1257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 102 ESPASDseneavHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPKPR 181
Cdd:PTZ00108 1258 DEFSSD------DLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKT 1331
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 182 ISDSESEELPKPRISDSESEDPPRPQVSDSESEElpkprvsdsESEDPPRPQASDSESEE 241
Cdd:PTZ00108 1332 ARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSS---------EDDDDSEVDDSEDEDDE 1382
|
|
| ECM1 |
pfam05782 |
Extracellular matrix protein 1 (ECM1); This family consists of several eukaryotic ... |
164-275 |
8.95e-04 |
|
Extracellular matrix protein 1 (ECM1); This family consists of several eukaryotic extracellular matrix protein 1 (ECM1) sequences. ECM1 has been shown to regulate endochondral bone formation, stimulate the proliferation of endothelial cells and induce angiogenesis. Mutations in the ECM1 gene can cause lipoid proteinosis, a disorder which causes generalized thickening of skin, mucosae and certain viscera. Classical features include beaded eyelid papules and laryngeal infiltration leading to hoarseness.
Pssm-ID: 461739 Cd Length: 518 Bit Score: 42.52 E-value: 8.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 164 PPRPqasdsesEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELP 243
Cdd:pfam05782 6 PPSP-------PQTRGLPVDHPDTSQHDPPFEGQSEVQPPPSQEAIPVQEEELPPPQLPVEKKVDPPLPQEAIPLQEELP 78
|
90 100 110
....*....|....*....|....*....|...
gi 564393048 244 KPRVSDSESE-DPQKGPasDSEAEDASRHKEKP 275
Cdd:pfam05782 79 PPQLPIEQKEiDPPFPQ--QEEITPSKQREEKP 109
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
71-260 |
1.04e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 42.76 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 71 NDEPSNVHASDSESEELHRpkdsDSESEEHAESPASDSENEAVHQQGSDSEKEEllnghaSDSEKEEGRKHAASDSETED 150
Cdd:PRK10263 643 NQYDSGDQYNDDEIDAMQQ----DELARQFAQTQQQRYGEQYQHDVPVNAEDAD------AAAEAELARQFAQTQQQRYS 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 151 TLQPQGSESDSED-----PPRPQASDSESE-----------EPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESE 214
Cdd:PRK10263 713 GEQPAGANPFSLDdfefsPMKALLDDGPHEplftpivepvqQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQ 792
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 564393048 215 ELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPA 260
Cdd:PRK10263 793 QPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVA 838
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
186-410 |
1.53e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.34 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 186 ESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEA 265
Cdd:PTZ00108 1154 KEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKT 1233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 266 EDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGL------HSSDSEEEEPKR---QKIDSDDDGEKEGDEKVAKR 336
Cdd:PTZ00108 1234 KPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKnapkrvSAVQYSPPPPSKrpdGESNGGSKPSSPTKKKVKKR 1313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564393048 337 K----AAVLSDSEDEDKASAKKSrviSDADDSDSDVVSDKSGKREKTVASDSEEEVGKEESSVKKSEEKDLFGSDSES 410
Cdd:PTZ00108 1314 LegslAALKKKKKSEKKTARKKK---SKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDEDDEDDD 1388
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
144-238 |
1.79e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 41.65 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 144 SDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPKPRISDSESEelpkpriSDSESEDPprpqvSDSESEElpkpRVSD 223
Cdd:pfam05110 422 SSSEDSDDDQAPEKPPPSSAPPSAPQSQPNSVASAHSSSGESGSS-------SDSESSSE-----SDSESES----SSSD 485
|
90
....*....|....*
gi 564393048 224 SESEDPPRPQASDSE 238
Cdd:pfam05110 486 SEANEPPRSATPEPE 500
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
98-296 |
2.35e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 98 EEHAESPASDSENEAV--HQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTLQPQ----GSESDSEDPPRPQASD 171
Cdd:PRK07764 610 EEAARPAAPAAPAAPAapAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWpakaGGAAPAAPPPAPAPAA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 172 SESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSeseelpkprvSDSESEDPPRPQASDSESEELPKPRVSDSE 251
Cdd:PRK07764 690 PAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGAS----------APSPAADDPVPLPPEPDDPPDPAGAPAQPP 759
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 564393048 252 SEDPQKGPASDSEAEDASRHKEKPESED----SDGENKREDSEVQNESD 296
Cdd:PRK07764 760 PPPAPAPAAAPAAAPPPSPPSEEEEMAEddapSMDDEDRRDAEEVAMEL 808
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
7-461 |
2.35e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 41.54 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 7 SGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSvdrhsENETSDREDGLTKIHNGTDSENDEPSNVHASDSESEE 86
Cdd:COG5271 552 DADETDEPEATAEEDEPDEAEAETEDATENADADETEE-----SADESEEAEASEDEAAEEEEADDDEADADADGAADEE 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 87 LHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTL--QPQGSESDSEDP 164
Cdd:COG5271 627 ETEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASddEEETEEADEDAE 706
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 165 PRPQASDSESEEPPKPRISDSESEELPKPriSDSESEDPPRPQVSDSESEELPKPRVSDSESedpprpQASDSESEELPK 244
Cdd:COG5271 707 TASEEADAEEADTEADGTAEEAEEAAEEA--ESADEEAASLPDEADAEEEAEEAEEAEEDDA------DGLEEALEEEKA 778
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 245 PRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSSDSEEEEPKRQKIDSDDD 324
Cdd:COG5271 779 DAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDV 858
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 325 GEKEGDekvAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSDVVSDKSGKREKTVASDSEEEVGKEESSVKKSEEKDLF 404
Cdd:COG5271 859 DADLDL---DADLAADEHEAEEAQEAETDADADADAGEADSSGESSAAAEDDDAAEDADSDDGANDEDDDDDAEEERKDA 935
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 564393048 405 GSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDDN 461
Cdd:COG5271 936 EEDELGAAEDDLDALALDEAGDEESDDAAADDAGDDSLADDDEALADAADDAEADDS 992
|
|
| PHA02664 |
PHA02664 |
hypothetical protein; Provisional |
232-341 |
2.48e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 177447 Cd Length: 534 Bit Score: 41.14 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 232 PQASDSESEELPKPrvsDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADrkglhSSDSEE 311
Cdd:PHA02664 424 PADQDVEAEAHDEF---DQDPGAPAHADRADSDEDDMDEQESGDERADGEDDSDSSYSYSTTSSEDESD-----SADDSW 495
|
90 100 110
....*....|....*....|....*....|
gi 564393048 312 EEPKRQKIDSDDDGEKEGDEKVAKRKAAVL 341
Cdd:PHA02664 496 GDESDSGIEHDDGGVGQAIEEEEEEERAVL 525
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
149-316 |
3.08e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 40.73 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 149 EDTLQPQGSESDSEDPPRPQASDS--------ESEEPP----KPRISDSESEELpKPRISDSESEDPPRPQVSDSESEEL 216
Cdd:PRK13108 280 EAPGALRGSEYVVDEALEREPAELaaaavasaASAVGPvgpgEPNQPDDVAEAV-KAEVAEVTDEVAAESVVQVADRDGE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 217 PKPRVSDSESEDPPRPQASDSESEELPKPRVSDS-ESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNES 295
Cdd:PRK13108 359 STPAVEETSEADIEREQPGDLAGQAPAAHQVDAEaASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPG 438
|
170 180
....*....|....*....|.
gi 564393048 296 DGHADRKGLHSSDSEEEEPKR 316
Cdd:PRK13108 439 DDPAEPDGIRRQDDFSSRRRR 459
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
9-463 |
3.09e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 41.15 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 9 DQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNVHASDSESEELH 88
Cdd:COG5271 340 DSAAEDAAEEAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEE 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 89 RPKDSDSESEEH----AESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDP 164
Cdd:COG5271 420 ADEDASAGETEDestdVTSAEDDIATDEEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEED 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 165 PRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRPQASDSESEELPK 244
Cdd:COG5271 500 AEAEADSDELTAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDAT 579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 245 PRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKglhsSDSEEEEPKRQKIDSDDD 324
Cdd:COG5271 580 ENADADETEESADESEEAEASEDEAAEEEEADDDEADADADGAADEEETEEEAAEDEA----AEPETDASEAADEDADAE 655
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 325 GEKEGDEKVAKRKAAVLSDSEDEDKASAKKSrVISDADDSDSDVVSDKSGKREKTVASDSEEEVGKEESSVKKSEEKDLF 404
Cdd:COG5271 656 TEAEASADESEEEAEDESETSSEDAEEDADA-AAAEASDDEEETEEADEDAETASEEADAEEADTEADGTAEEAEEAAEE 734
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 564393048 405 GSDSESGNEEENLIADIFGESGDEEEEEFTgfnQEDLEEEKNETQLKEAEDSDSDDNIK 463
Cdd:COG5271 735 AESADEEAASLPDEADAEEEAEEAEEAEED---DADGLEEALEEEKADAEEAATDEEAE 790
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
19-257 |
3.21e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 40.93 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 19 VQDERDSGSDGEDDVNEQHSGSDTGSVDRHSE--NETSDREDGLTKIHNGTDSEND-EPSNVHASDSESEELHRPKDSDS 95
Cdd:PRK08581 52 SKDTSSKDTDKADNNNTSNQDNNDKKFSTIDSstSDSNNIIDFIYKNLPQTNINQLlTKNKYDDNYSLTTLIQNLFNLNS 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 96 ESEEHAESPASDSENEAVHQQGSDSEKEellNGHASDSEKEEGRKHAASDSeTEDTLQPQGSESDSEDPPRPQASDSESE 175
Cdd:PRK08581 132 DISDYEQPRNSEKSTNDSNKNSDSSIKN---DTDTQSSKQDKADNQKAPSS-NNTKPSTSNKQPNSPKPTQPNQSNSQPA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 176 EPPKPRISDSESE-----ELPKPRISDSESEDPPR-PQVSDSESEelpKPRVSDSESEDPPRPQASDSESEELPKPrvsD 249
Cdd:PRK08581 208 SDDTANQKSSSKDnqsmsDSALDSILDQYSEDAKKtQKDYASQSK---KDKTETSNTKNPQLPTQDELKHKSKPAQ---S 281
|
....*...
gi 564393048 250 SESEDPQK 257
Cdd:PRK08581 282 FENDVNQS 289
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
4-356 |
3.24e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 4 EYYSGDQSDDGGATPVQDERDSGSDGEDDVneqHSGSDTGSVDRHSENETSDREDGLTKIHNGTDSENDEPSNVH---AS 80
Cdd:PHA03307 6 DLYDLIEAAAEGGEFFPRPPATPGDAADDL---LSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTeapAN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 81 DSESEELHRPKDSDSESEEHAESP-----ASDSENEAVHQQGSDSEKEEllNGHASDSEKEEGRKHAASDSETEDTLQPQ 155
Cdd:PHA03307 83 ESRSTPTWSLSTLAPASPAREGSPtppgpSSPDPPPPTPPPASPPPSPA--PDLSEMLRPVGSPGPPPAASPPAAGASPA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 156 GSESDSEDPP---RPQASDSESEEPPkprisDSESEELPKPRISDSESEDPPRPQVSDSESEELPKPRVSDSESEDPPRP 232
Cdd:PHA03307 161 AVASDAASSRqaaLPLSSPEETARAP-----SSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGAS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 233 QASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDSDGENKREDSEVQNESDGHADRKGLHSS---DS 309
Cdd:PHA03307 236 SSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSsprAS 315
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 564393048 310 EEEEPkrqkiDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSR 356
Cdd:PHA03307 316 SSSSS-----SRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPP 357
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
64-261 |
3.50e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 64 HNGTDSENDEPSNVHASDSESEELHRPKD---------SDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSE 134
Cdd:PHA03307 202 ASPRPPRRSSPISASASSPAPAPGRSAADdagasssdsSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSR 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 135 KEEGRKHAaSDSETEDTLQPqGSESDSEDPPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESE 214
Cdd:PHA03307 282 PGPASSSS-SPRERSPSPSP-SSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPP 359
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 564393048 215 ELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPAS 261
Cdd:PHA03307 360 ADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGR 406
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
9-460 |
3.92e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 40.77 E-value: 3.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 9 DQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVDRHSENETSDRE---DGLTKIHNGTDSENDEPSNVHASDSESE 85
Cdd:COG5271 431 DESTDVTSAEDDIATDEEADSLADEEEEAEAELDTEEDTESAEEDADGDeatDEDDASDDGDEEEAEEDAEAEADSDELT 510
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 86 ELHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPP 165
Cdd:COG5271 511 AEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDATENADADETEES 590
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 166 RPQASDSE-------SEEPPKPRISDSESEELPKPRISDSESEDPPRPQVSDSESE--------ELPKPRVSDSESEDPP 230
Cdd:COG5271 591 ADESEEAEasedeaaEEEEADDDEADADADGAADEEETEEEAAEDEAAEPETDASEaadedadaETEAEASADESEEEAE 670
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 231 RPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESE-DSDGENKREDSEVQNESDGHADRKGLHSSDS 309
Cdd:COG5271 671 DESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADtEADGTAEEAEEAAEEAESADEEAASLPDEAD 750
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 310 EEEEPKRQKIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSRVISDADDSDSDVVSDKSGKREKTVASDSEEEVG 389
Cdd:COG5271 751 AEEEAEEAEEAEEDDADGLEEALEEEKADAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEET 830
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564393048 390 KEESSVKKSEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEKNETQLKEAEDSDSDD 460
Cdd:COG5271 831 ADEALEDIEAGIAEDDEEDDDAAAAKDVDADLDLDADLAADEHEAEEAQEAETDADADADAGEADSSGESS 901
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
52-457 |
5.58e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 5.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 52 ETSDREDGLTKIHNGTDSENDEPSNVHASDSESEELHRPKDSDS--ESEEHAESPASDSENEAVHQQGSDSEKEELLNGH 129
Cdd:PTZ00121 1480 EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKadEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK 1559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 130 ASDSEKEEGRKHAASDSETEDTLQPQGSESDSEDPPRPQASDSESEEPPKPRISDSESEELPKPRISDSESEDPPRPQVS 209
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLK 1639
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 210 DSESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDS------EAEDASRHKEKPESEDSDGE 283
Cdd:PTZ00121 1640 KKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEAlkkeaeEAKKAEELKKKEAEEKKKAE 1719
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 284 NKREDSEVQNESDGHADRKGLHSSDSEEE----EPKRQKIDSDDDGEKEGDEKVAKRKAAVLSDSEDEDKASAKKSRVIS 359
Cdd:PTZ00121 1720 ELKKAEEENKIKAEEAKKEAEEDKKKAEEakkdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 360 DADDSDSDVVSDKSGKREKTVASDSEEEVGKEESSVKKSEEKDLFGSD-------------SESGNEEENLIADIfgesg 426
Cdd:PTZ00121 1800 IKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADafekhkfnknnenGEDGNKEADFNKEK----- 1874
|
410 420 430
....*....|....*....|....*....|.
gi 564393048 427 deeeeeftgFNQEDLEEEKNETQLKEAEDSD 457
Cdd:PTZ00121 1875 ---------DLKEDDEEEIEEADEIEKIDKD 1896
|
|
| Herpes_LMP1 |
pfam05297 |
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane ... |
115-271 |
6.38e-03 |
|
Herpesvirus latent membrane protein 1 (LMP1); This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys
Pssm-ID: 283060 Cd Length: 386 Bit Score: 39.63 E-value: 6.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 115 QQGSDSekeellNGHASDSEKEEGRKH----AASDSE---TEDTLQPQGSESDSedPPRPQASDSESeePPKPRISDSES 187
Cdd:pfam05297 205 QQATDD------SGHESDSNSNEGRHHllvsGAGDGPplcSQNLGAPGGGPDNG--PQDPDNTDDNG--PQDPDNTDDNG 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 188 EELPKPRisDSESEDPPRPQVSDSESEELPkprvsdsesEDPPRPQASDSESEELPKPRVSDS-ESEDPQKGPASDSEAE 266
Cdd:pfam05297 275 PHDPLPQ--DPDNTDDNGPQDPDNTADNGP---------HDPLPHNPSDSAGNDGGPPNLTEEvENKGGDQGPPLMTDGG 343
|
....*
gi 564393048 267 DASRH 271
Cdd:pfam05297 344 GGHSH 348
|
|
| VIR_N |
pfam15912 |
Virilizer, N-terminal; VIR_N is the conserved N-terminus of the protein virilizer, necessary ... |
153-296 |
7.20e-03 |
|
Virilizer, N-terminal; VIR_N is the conserved N-terminus of the protein virilizer, necessary for male and female viability and required for the production of eggs capable of embryonic development.
Pssm-ID: 464938 Cd Length: 265 Bit Score: 39.10 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 153 QPQGSESDSEDPPRPQasdseseEPPKPRISDSESEelpkprisDSESEDPPRPQVSDSESEELPK---------PRVSD 223
Cdd:pfam15912 125 RSHSHDIDSPPPPPPP-------PPPPPQKADWEKE--------DQYNGSPPRPEPRGPRTPELLPahtgnvpgpPPPDD 189
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564393048 224 SESEDPPRPQASDSESEELPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPESEDsDGENKREDSEVQNESD 296
Cdd:pfam15912 190 DEEEDHYVPVTVGEVKEENCEHRSDYLEPVSPPERTSLPAEETYSEAGREERRGSR-EGERDEEDSDVRSRED 261
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
79-180 |
8.54e-03 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 39.39 E-value: 8.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564393048 79 ASDSESEELHRPKDSDSESEEHAESPASDSENEAVHQQGSDSEKEELLNGHASDSEKEEGRkhAASDSETEDTLQPQGSE 158
Cdd:COG4547 208 AEELGEDEDEEDEDDEDDSGEQEEDEEDGEDEDEESDEGAEAEDAEASGDDAEEGESEAAE--AESDEMAEEAEGEDSEE 285
|
90 100
....*....|....*....|..
gi 564393048 159 SDSEDPPRPQASDSESEEPPKP 180
Cdd:COG4547 286 PGEPWRPNAPPPDDPADPDYKV 307
|
|
| |
