protein lin-54 homolog isoform X2 [Rattus norvegicus]
TCR domain-containing protein( domain architecture ID 10508328)
TCR domain-containing protein similar to Homo sapiens tesmin, a testis-specific metallothionein-like protein, and to Arabidopsis thaliana TSO1, a novel protein that modulates cytokinesis and cell expansion in Arabidopsis
List of domain hits
Name | Accession | Description | Interval | E-value | ||||||
TCR | pfam03638 | Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two ... |
596-631 | 1.98e-20 | ||||||
Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. : Pssm-ID: 461001 Cd Length: 38 Bit Score: 84.58 E-value: 1.98e-20
|
||||||||||
TCR | pfam03638 | Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two ... |
522-545 | 4.43e-10 | ||||||
Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. : Pssm-ID: 461001 Cd Length: 38 Bit Score: 55.30 E-value: 4.43e-10
|
||||||||||
PHA03247 super family | cl33720 | large tegument protein UL36; Provisional |
165-480 | 1.38e-05 | ||||||
large tegument protein UL36; Provisional The actual alignment was detected with superfamily member PHA03247: Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 1.38e-05
|
||||||||||
Name | Accession | Description | Interval | E-value | ||||||
TCR | pfam03638 | Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two ... |
596-631 | 1.98e-20 | ||||||
Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. Pssm-ID: 461001 Cd Length: 38 Bit Score: 84.58 E-value: 1.98e-20
|
||||||||||
TCR | pfam03638 | Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two ... |
522-545 | 4.43e-10 | ||||||
Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. Pssm-ID: 461001 Cd Length: 38 Bit Score: 55.30 E-value: 4.43e-10
|
||||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
165-480 | 1.38e-05 | ||||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 1.38e-05
|
||||||||||
MSL2_CXC | cd13122 | DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; The CXC ... |
596-631 | 2.85e-04 | ||||||
DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; The CXC domain of Drosophila melanogaster MSL2 forms a Zn(3)Cys(9) cluster and is involved in recruiting members of the dosage compensation complex (DCC) to sites on the X chromosome. Pssm-ID: 240555 Cd Length: 50 Bit Score: 39.30 E-value: 2.85e-04
|
||||||||||
Name | Accession | Description | Interval | E-value | ||||||
TCR | pfam03638 | Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two ... |
596-631 | 1.98e-20 | ||||||
Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. Pssm-ID: 461001 Cd Length: 38 Bit Score: 84.58 E-value: 1.98e-20
|
||||||||||
TCR | pfam03638 | Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two ... |
522-545 | 4.43e-10 | ||||||
Tesmin/TSO1-like CXC domain, cysteine-rich domain; This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. Pssm-ID: 461001 Cd Length: 38 Bit Score: 55.30 E-value: 4.43e-10
|
||||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
165-480 | 1.38e-05 | ||||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 1.38e-05
|
||||||||||
MSL2-CXC | pfam16682 | CXC domain of E3 ubiquitin-protein ligase MSL2; MSL2-CXC is an autonomously folded domain ... |
592-631 | 2.42e-04 | ||||||
CXC domain of E3 ubiquitin-protein ligase MSL2; MSL2-CXC is an autonomously folded domain containing that binds three zinc ions. It lies on the E3 ubiquitin-protein ligase MSL2 in eukaryotes. The CXC domain critically contributes to the DNA-binding activity of MSL2. It carries 9 invariant cysteines within about a 50 residue region. Pssm-ID: 435512 Cd Length: 55 Bit Score: 39.34 E-value: 2.42e-04
|
||||||||||
MSL2_CXC | cd13122 | DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; The CXC ... |
596-631 | 2.85e-04 | ||||||
DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; The CXC domain of Drosophila melanogaster MSL2 forms a Zn(3)Cys(9) cluster and is involved in recruiting members of the dosage compensation complex (DCC) to sites on the X chromosome. Pssm-ID: 240555 Cd Length: 50 Bit Score: 39.30 E-value: 2.85e-04
|
||||||||||
Blast search parameters | ||||
|