cell death-inducing p53-target protein 1 isoform X1 [Rattus norvegicus]
Protein Classification
LITAF-like zinc ribbon domain-containing protein( domain architecture ID 10566201)
LITAF (lipopolysaccharide-induced tumor necrosis factor-alpha factor)-like zinc ribbon domain-containing protein similar to vertebrate cell death-inducing p53-target protein 1 that acts as an important p53/TP53-apoptotic effector, and lipopolysaccharide (LPS)-induced tumor necrosis factor (TNF)-alpha factor (LITAF) which plays an important role controlling the expression of TNF-alpha and the other cytokine genes in the presence of LPS
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| zf-LITAF-like | pfam10601 | LITAF-like zinc ribbon domain; Members of this family display a conserved zinc ribbon ... |
137-205 | 6.66e-21 | ||
LITAF-like zinc ribbon domain; Members of this family display a conserved zinc ribbon structure with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS). The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure. : Pssm-ID: 463165 Cd Length: 68 Bit Score: 82.27 E-value: 6.66e-21
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| Name | Accession | Description | Interval | E-value | ||
| zf-LITAF-like | pfam10601 | LITAF-like zinc ribbon domain; Members of this family display a conserved zinc ribbon ... |
137-205 | 6.66e-21 | ||
LITAF-like zinc ribbon domain; Members of this family display a conserved zinc ribbon structure with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS). The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure. Pssm-ID: 463165 Cd Length: 68 Bit Score: 82.27 E-value: 6.66e-21
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| LITAF | smart00714 | Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), ... |
137-206 | 8.62e-18 | ||
Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins; Pssm-ID: 197841 Cd Length: 67 Bit Score: 73.90 E-value: 8.62e-18
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| Name | Accession | Description | Interval | E-value | ||
| zf-LITAF-like | pfam10601 | LITAF-like zinc ribbon domain; Members of this family display a conserved zinc ribbon ... |
137-205 | 6.66e-21 | ||
LITAF-like zinc ribbon domain; Members of this family display a conserved zinc ribbon structure with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS). The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure. Pssm-ID: 463165 Cd Length: 68 Bit Score: 82.27 E-value: 6.66e-21
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| LITAF | smart00714 | Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), ... |
137-206 | 8.62e-18 | ||
Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins; Pssm-ID: 197841 Cd Length: 67 Bit Score: 73.90 E-value: 8.62e-18
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| Blast search parameters | ||||
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