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Conserved domains on  [gi|564349881|ref|XP_006237770|]
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retroelement silencing factor 1 isoform X1 [Rattus norvegicus]

Protein Classification

retroelement silencing factor 1( domain architecture ID 12173327)

retroelement silencing factor 1 (RESF1) is a DUF4617 domain-containing protein that plays a role in the regulation of imprinted gene expression, and regulates repressive epigenetic modifications associated with SETDB1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4617 pfam15395
Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins ...
 446-1499 0e+00

Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins in this family are typically between 702 and 1745 amino acids in length.


:

Pssm-ID: 464702  Cd Length: 1086  Bit Score: 1304.40  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   446 SMELLATCLSLWKNQPPktteenVPKPLEEKQCNTSRISTTVVGSSHPTNeVHVKSFCSGVGNSQKLL--SSSQTILSVL 523
Cdd:pfam15395    1 SMELLATCLSLWKKQPS------ESESTEEKQCNESRTNTTIVGLSKPTN-VCIKSPCSVVGNSQNKLlnSSQETVLPMV 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   524 TPSGESSGVAVGKGTELQIAVVSPLVLADTNPLPGKELAPEVLPEPPYPVVKEGSICSLQHQQAE----TAALPFHITGV 599
Cdd:pfam15395   74 VQNHESSGANLTKGTELQIAVVSPLILSDVKTLSVKDITPEALPETVYPVIKEGSICSLQNQLAEnvlvTAALKVDVNEP 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   600 VADSNLSVEMSLPAQKEKQHKPTQGD----PDIAD-----HGLGKLSPLGT-EAVPNSVDSTTVSGPMLQIESICSLAEG 669
Cdd:pfam15395  154 VASSTTSTKIFPLIQKEKQNKSTNGNsegtPNTNQgkhfeLESKDHCPVSDqQVSQKSRDSTVVSSDMLQIDSICSLVEG 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   670 DVSYNSQIAEIFNSV---QNEPEKPS-PNQVIN---NQQEQVDGTTENKDFSLQKDKkYIRYTYVPREITEQPEVLQPEE 742
Cdd:pfam15395  234 DVSYNSQIAKIFNSVpleQVEPQKPSlPSQQVIsdrRQKEQLDNTTENKDLLFQKDE-SVQCTDVSHEILDQSKSLQPPE 312

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   743 PASCEYVEANTETIEESGRECSGGKESTAEDVCSPAGFQQDPHPQETDSLSNKSAHcLPAVNEINDESEPVSYLHDQLSE 822
Cdd:pfam15395  313 SSSLKNVEANRGSEEESKLEHSTKKESTALDVCSSAAIQQDLAPQEIDSLSSYTAQ-DPTKNEILDDATPILYLHDQLSE 391

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   823 LLKEFPYGIETVSRHEVSVDQKKTHKILENETGDKTSNVFGDSTDQIKITVLNSEQIKELFPEED-QPCDLDKLAEPEGK 901
Cdd:pfam15395  392 LLKEFPYGIEGVNRRNDSVAQQKTNQISKDQTCSKKSCDSKDPTDQIQITILNSEQMKELFPEQDdQPSEVDKLAEPQKE 471

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   902 N-VAEVKSPCDSQVPRE-ESHDFGMLDPEKDKIHCCALGWLSMVYEGVPKCHC------SSNEEKGKDQC--LDMNSCKQ 971
Cdd:pfam15395  472 KpVTEEGSQCDPQAPKEgESPDSVSLDSEKDDIHCCALGWLSMVYEGVPQCQCnsiknsASKEEKGKDQCspLETNSCKQ 551

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   972 GEQPCNNGITIfEINPVSNNPKTPLTQAAEKGHFSEMHGDktkgsktkdsreeqqhfsaKCYkkdKDNLKMRHDSSLKME 1051
Cdd:pfam15395  552 GENTSDSDAPV-KFNSVSNNPKTPLTPPVEKNHFPEIQGN-------------------KCY---KDTSKTKSNSSLRTE 608

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1052 QKL--KNTSSECDR-LNPSKSSKIATPEILH-VKTSNSDKNMSFFKQASQESLQRKPTSQDSNPVKAPVELPS--NTDPC 1125
Cdd:pfam15395  609 QKPlpGQLSSKCDKdLDSLQSHKRKEKLQFHeVTFQSSKKMMKFSDQKSQESLQRKHLSQNSGPLKAKTVFLSskNKDLC 688

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1126 RRNTSLVQFVSPEKKKLKFKAGGSRLKYFEKRKTDNMIIPDVEIKKKKYEKQEQNKNAG-ETLKLCSALRESNERASVQE 1204
Cdd:pfam15395  689 RKNSSLVQSVSPEKLKLKFKADGHKQKKLEKRKIDQGEILDGEIKKKKNDKQEQNKNVGpGTFKLCNLLSNPNERASVKE 768

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1205 NAIPSPESSDSKGSSLKSTRVITVQEYLQRRKDKHVTGSDASGNICVENVLCNSEHMKTSKDSAE-ISWEKSADGQSIRA 1283
Cdd:pfam15395  769 KTVSNVKSSDSKDSSSKSNRVITPQEYLQRQKHKEAIGKKASKKTCVENVPCDSEHMKNSKLSMQvISCGKSNEKQGSNV 848

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1284 ETSKEPGHNSTIHGKAFKIHHSEVSRTHSvSSNSK----GKQPDK-IYKARTSN---------EHSQVPLQVKEQRKQYL 1349
Cdd:pfam15395  849 QTSKESLNIYLSHGKNLKIHHSEESKTHS-SRNKKgtldGKQPDKwIDKTKSDKnllninnetERSQLSLQAKEQRKQYL 927

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1350 NRVAFKCTERESICLTKLDSASKKLSTEKKESEAHTLKT-----KNIDKPSMLEFKLCPDVLLKNTSSVDKQDEPEP-KK 1423
Cdd:pfam15395  928 NRVAFKCTERESICLTKLDSSPRKLSKESGKSQENKPKTslpvkDTTEKPSMLEFKLCPDILFKNTNTVEEQKDLKNpPR 1007

                         1050      1060      1070      1080      1090      1100      1110
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564349881  1424 EKAPVQVSGIKSTKEDWLKCIPTRTKMPESSQEIDS---AGSRLSKRSFSADEFETLQNPVKDSNVMFRTYKKMYLEKR 1499
Cdd:pfam15395 1008 EQAPVQVSGIKSTKEDWLKCVPTKKKMPEANQEIDDnilANSRLSKRSLSADGFETLQNPVKDSKAMFQTYKKMYLEKR 1086
 
Name Accession Description Interval E-value
DUF4617 pfam15395
Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins ...
 446-1499 0e+00

Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins in this family are typically between 702 and 1745 amino acids in length.


Pssm-ID: 464702  Cd Length: 1086  Bit Score: 1304.40  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   446 SMELLATCLSLWKNQPPktteenVPKPLEEKQCNTSRISTTVVGSSHPTNeVHVKSFCSGVGNSQKLL--SSSQTILSVL 523
Cdd:pfam15395    1 SMELLATCLSLWKKQPS------ESESTEEKQCNESRTNTTIVGLSKPTN-VCIKSPCSVVGNSQNKLlnSSQETVLPMV 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   524 TPSGESSGVAVGKGTELQIAVVSPLVLADTNPLPGKELAPEVLPEPPYPVVKEGSICSLQHQQAE----TAALPFHITGV 599
Cdd:pfam15395   74 VQNHESSGANLTKGTELQIAVVSPLILSDVKTLSVKDITPEALPETVYPVIKEGSICSLQNQLAEnvlvTAALKVDVNEP 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   600 VADSNLSVEMSLPAQKEKQHKPTQGD----PDIAD-----HGLGKLSPLGT-EAVPNSVDSTTVSGPMLQIESICSLAEG 669
Cdd:pfam15395  154 VASSTTSTKIFPLIQKEKQNKSTNGNsegtPNTNQgkhfeLESKDHCPVSDqQVSQKSRDSTVVSSDMLQIDSICSLVEG 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   670 DVSYNSQIAEIFNSV---QNEPEKPS-PNQVIN---NQQEQVDGTTENKDFSLQKDKkYIRYTYVPREITEQPEVLQPEE 742
Cdd:pfam15395  234 DVSYNSQIAKIFNSVpleQVEPQKPSlPSQQVIsdrRQKEQLDNTTENKDLLFQKDE-SVQCTDVSHEILDQSKSLQPPE 312

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   743 PASCEYVEANTETIEESGRECSGGKESTAEDVCSPAGFQQDPHPQETDSLSNKSAHcLPAVNEINDESEPVSYLHDQLSE 822
Cdd:pfam15395  313 SSSLKNVEANRGSEEESKLEHSTKKESTALDVCSSAAIQQDLAPQEIDSLSSYTAQ-DPTKNEILDDATPILYLHDQLSE 391

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   823 LLKEFPYGIETVSRHEVSVDQKKTHKILENETGDKTSNVFGDSTDQIKITVLNSEQIKELFPEED-QPCDLDKLAEPEGK 901
Cdd:pfam15395  392 LLKEFPYGIEGVNRRNDSVAQQKTNQISKDQTCSKKSCDSKDPTDQIQITILNSEQMKELFPEQDdQPSEVDKLAEPQKE 471

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   902 N-VAEVKSPCDSQVPRE-ESHDFGMLDPEKDKIHCCALGWLSMVYEGVPKCHC------SSNEEKGKDQC--LDMNSCKQ 971
Cdd:pfam15395  472 KpVTEEGSQCDPQAPKEgESPDSVSLDSEKDDIHCCALGWLSMVYEGVPQCQCnsiknsASKEEKGKDQCspLETNSCKQ 551

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   972 GEQPCNNGITIfEINPVSNNPKTPLTQAAEKGHFSEMHGDktkgsktkdsreeqqhfsaKCYkkdKDNLKMRHDSSLKME 1051
Cdd:pfam15395  552 GENTSDSDAPV-KFNSVSNNPKTPLTPPVEKNHFPEIQGN-------------------KCY---KDTSKTKSNSSLRTE 608

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1052 QKL--KNTSSECDR-LNPSKSSKIATPEILH-VKTSNSDKNMSFFKQASQESLQRKPTSQDSNPVKAPVELPS--NTDPC 1125
Cdd:pfam15395  609 QKPlpGQLSSKCDKdLDSLQSHKRKEKLQFHeVTFQSSKKMMKFSDQKSQESLQRKHLSQNSGPLKAKTVFLSskNKDLC 688

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1126 RRNTSLVQFVSPEKKKLKFKAGGSRLKYFEKRKTDNMIIPDVEIKKKKYEKQEQNKNAG-ETLKLCSALRESNERASVQE 1204
Cdd:pfam15395  689 RKNSSLVQSVSPEKLKLKFKADGHKQKKLEKRKIDQGEILDGEIKKKKNDKQEQNKNVGpGTFKLCNLLSNPNERASVKE 768

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1205 NAIPSPESSDSKGSSLKSTRVITVQEYLQRRKDKHVTGSDASGNICVENVLCNSEHMKTSKDSAE-ISWEKSADGQSIRA 1283
Cdd:pfam15395  769 KTVSNVKSSDSKDSSSKSNRVITPQEYLQRQKHKEAIGKKASKKTCVENVPCDSEHMKNSKLSMQvISCGKSNEKQGSNV 848

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1284 ETSKEPGHNSTIHGKAFKIHHSEVSRTHSvSSNSK----GKQPDK-IYKARTSN---------EHSQVPLQVKEQRKQYL 1349
Cdd:pfam15395  849 QTSKESLNIYLSHGKNLKIHHSEESKTHS-SRNKKgtldGKQPDKwIDKTKSDKnllninnetERSQLSLQAKEQRKQYL 927

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1350 NRVAFKCTERESICLTKLDSASKKLSTEKKESEAHTLKT-----KNIDKPSMLEFKLCPDVLLKNTSSVDKQDEPEP-KK 1423
Cdd:pfam15395  928 NRVAFKCTERESICLTKLDSSPRKLSKESGKSQENKPKTslpvkDTTEKPSMLEFKLCPDILFKNTNTVEEQKDLKNpPR 1007

                         1050      1060      1070      1080      1090      1100      1110
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564349881  1424 EKAPVQVSGIKSTKEDWLKCIPTRTKMPESSQEIDS---AGSRLSKRSFSADEFETLQNPVKDSNVMFRTYKKMYLEKR 1499
Cdd:pfam15395 1008 EQAPVQVSGIKSTKEDWLKCVPTKKKMPEANQEIDDnilANSRLSKRSLSADGFETLQNPVKDSKAMFQTYKKMYLEKR 1086
 
Name Accession Description Interval E-value
DUF4617 pfam15395
Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins ...
 446-1499 0e+00

Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins in this family are typically between 702 and 1745 amino acids in length.


Pssm-ID: 464702  Cd Length: 1086  Bit Score: 1304.40  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   446 SMELLATCLSLWKNQPPktteenVPKPLEEKQCNTSRISTTVVGSSHPTNeVHVKSFCSGVGNSQKLL--SSSQTILSVL 523
Cdd:pfam15395    1 SMELLATCLSLWKKQPS------ESESTEEKQCNESRTNTTIVGLSKPTN-VCIKSPCSVVGNSQNKLlnSSQETVLPMV 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   524 TPSGESSGVAVGKGTELQIAVVSPLVLADTNPLPGKELAPEVLPEPPYPVVKEGSICSLQHQQAE----TAALPFHITGV 599
Cdd:pfam15395   74 VQNHESSGANLTKGTELQIAVVSPLILSDVKTLSVKDITPEALPETVYPVIKEGSICSLQNQLAEnvlvTAALKVDVNEP 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   600 VADSNLSVEMSLPAQKEKQHKPTQGD----PDIAD-----HGLGKLSPLGT-EAVPNSVDSTTVSGPMLQIESICSLAEG 669
Cdd:pfam15395  154 VASSTTSTKIFPLIQKEKQNKSTNGNsegtPNTNQgkhfeLESKDHCPVSDqQVSQKSRDSTVVSSDMLQIDSICSLVEG 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   670 DVSYNSQIAEIFNSV---QNEPEKPS-PNQVIN---NQQEQVDGTTENKDFSLQKDKkYIRYTYVPREITEQPEVLQPEE 742
Cdd:pfam15395  234 DVSYNSQIAKIFNSVpleQVEPQKPSlPSQQVIsdrRQKEQLDNTTENKDLLFQKDE-SVQCTDVSHEILDQSKSLQPPE 312

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   743 PASCEYVEANTETIEESGRECSGGKESTAEDVCSPAGFQQDPHPQETDSLSNKSAHcLPAVNEINDESEPVSYLHDQLSE 822
Cdd:pfam15395  313 SSSLKNVEANRGSEEESKLEHSTKKESTALDVCSSAAIQQDLAPQEIDSLSSYTAQ-DPTKNEILDDATPILYLHDQLSE 391

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   823 LLKEFPYGIETVSRHEVSVDQKKTHKILENETGDKTSNVFGDSTDQIKITVLNSEQIKELFPEED-QPCDLDKLAEPEGK 901
Cdd:pfam15395  392 LLKEFPYGIEGVNRRNDSVAQQKTNQISKDQTCSKKSCDSKDPTDQIQITILNSEQMKELFPEQDdQPSEVDKLAEPQKE 471

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   902 N-VAEVKSPCDSQVPRE-ESHDFGMLDPEKDKIHCCALGWLSMVYEGVPKCHC------SSNEEKGKDQC--LDMNSCKQ 971
Cdd:pfam15395  472 KpVTEEGSQCDPQAPKEgESPDSVSLDSEKDDIHCCALGWLSMVYEGVPQCQCnsiknsASKEEKGKDQCspLETNSCKQ 551

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881   972 GEQPCNNGITIfEINPVSNNPKTPLTQAAEKGHFSEMHGDktkgsktkdsreeqqhfsaKCYkkdKDNLKMRHDSSLKME 1051
Cdd:pfam15395  552 GENTSDSDAPV-KFNSVSNNPKTPLTPPVEKNHFPEIQGN-------------------KCY---KDTSKTKSNSSLRTE 608

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1052 QKL--KNTSSECDR-LNPSKSSKIATPEILH-VKTSNSDKNMSFFKQASQESLQRKPTSQDSNPVKAPVELPS--NTDPC 1125
Cdd:pfam15395  609 QKPlpGQLSSKCDKdLDSLQSHKRKEKLQFHeVTFQSSKKMMKFSDQKSQESLQRKHLSQNSGPLKAKTVFLSskNKDLC 688

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1126 RRNTSLVQFVSPEKKKLKFKAGGSRLKYFEKRKTDNMIIPDVEIKKKKYEKQEQNKNAG-ETLKLCSALRESNERASVQE 1204
Cdd:pfam15395  689 RKNSSLVQSVSPEKLKLKFKADGHKQKKLEKRKIDQGEILDGEIKKKKNDKQEQNKNVGpGTFKLCNLLSNPNERASVKE 768

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1205 NAIPSPESSDSKGSSLKSTRVITVQEYLQRRKDKHVTGSDASGNICVENVLCNSEHMKTSKDSAE-ISWEKSADGQSIRA 1283
Cdd:pfam15395  769 KTVSNVKSSDSKDSSSKSNRVITPQEYLQRQKHKEAIGKKASKKTCVENVPCDSEHMKNSKLSMQvISCGKSNEKQGSNV 848

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1284 ETSKEPGHNSTIHGKAFKIHHSEVSRTHSvSSNSK----GKQPDK-IYKARTSN---------EHSQVPLQVKEQRKQYL 1349
Cdd:pfam15395  849 QTSKESLNIYLSHGKNLKIHHSEESKTHS-SRNKKgtldGKQPDKwIDKTKSDKnllninnetERSQLSLQAKEQRKQYL 927

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564349881  1350 NRVAFKCTERESICLTKLDSASKKLSTEKKESEAHTLKT-----KNIDKPSMLEFKLCPDVLLKNTSSVDKQDEPEP-KK 1423
Cdd:pfam15395  928 NRVAFKCTERESICLTKLDSSPRKLSKESGKSQENKPKTslpvkDTTEKPSMLEFKLCPDILFKNTNTVEEQKDLKNpPR 1007

                         1050      1060      1070      1080      1090      1100      1110
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564349881  1424 EKAPVQVSGIKSTKEDWLKCIPTRTKMPESSQEIDS---AGSRLSKRSFSADEFETLQNPVKDSNVMFRTYKKMYLEKR 1499
Cdd:pfam15395 1008 EQAPVQVSGIKSTKEDWLKCVPTKKKMPEANQEIDDnilANSRLSKRSLSADGFETLQNPVKDSKAMFQTYKKMYLEKR 1086
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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