NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|564339259|ref|XP_006233548|]
View 

prostaglandin F2-alpha receptor isoform X1 [Rattus norvegicus]

Protein Classification

G protein-coupled receptor family protein; olfactory receptor subfamily 2A protein( domain architecture ID 11606871)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters| olfactory receptor (OR) subfamily 2A protein, such as human olfactory receptor 2A2 and related proteins in other mammals and sauropsids; ORs play a central role in olfaction, the sense of smell, and belong to the class A rhodopsin-like family of seven-transmembrane G protein-coupled receptors (7TM GPCRs)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
7tmA_FP cd15145
prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G ...
27-316 0e+00

prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The PGF2-alpha receptor, also called prostanoid FP receptor, is a class A G-protein coupled receptor whose endogenous ligand is prostaglandin F2-alpha. PGF2-alpha binding to this receptor is coupled to the stimulation of phospholipase C (PLC) pathway via G-protein subunit G(q). This leads to the release of inositol trisphosphate (IP3) and diacylglycerol (DAG) which results in increased intracellular Ca2+ levels and activation of PKC. The receptor activation primarily induces uterine contraction and bronchoconstriction, and stimulates luteolysis. Like most prostanoid receptors, the PGF2-alpha receptor has also been implicated in tumor angiogenesis and metastasis.


:

Pssm-ID: 320273 [Multi-domain]  Cd Length: 290  Bit Score: 514.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  27 RLSVFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNI 106
Cdd:cd15145    1 KLSVFFSIIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGTIAVFVYASDKDWIRFDQSNI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 107 LCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWC 186
Cdd:cd15145   81 LCSVFGICMVFFGLCPLLLGSVMAVERCIGVTKPIFHSTKMTSKHVKMMLSGVCLFAVLVALLPILGHRDYQIQASRTWC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 187 FYNTEHIEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHRQGRSHHLEMVIQLLAIMCVSCVCWSPFL 266
Cdd:cd15145  161 FYKTEHIEDWEDRFYLLLFSFLGLLALAISFLCNAITGITLLRVKFRSQQHRQGRSHHFEMVIQLLAIMCVSCICWSPFL 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 564339259 267 VTMANIAINGNNSPVTCETTLFALRMATWNQILDPWVYILLRKAVLRNLY 316
Cdd:cd15145  241 VTMANIGINGRDSLESCETILFALRMATWNQILDPWVYILLRKAVLKNLY 290
 
Name Accession Description Interval E-value
7tmA_FP cd15145
prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G ...
27-316 0e+00

prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The PGF2-alpha receptor, also called prostanoid FP receptor, is a class A G-protein coupled receptor whose endogenous ligand is prostaglandin F2-alpha. PGF2-alpha binding to this receptor is coupled to the stimulation of phospholipase C (PLC) pathway via G-protein subunit G(q). This leads to the release of inositol trisphosphate (IP3) and diacylglycerol (DAG) which results in increased intracellular Ca2+ levels and activation of PKC. The receptor activation primarily induces uterine contraction and bronchoconstriction, and stimulates luteolysis. Like most prostanoid receptors, the PGF2-alpha receptor has also been implicated in tumor angiogenesis and metastasis.


Pssm-ID: 320273 [Multi-domain]  Cd Length: 290  Bit Score: 514.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  27 RLSVFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNI 106
Cdd:cd15145    1 KLSVFFSIIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGTIAVFVYASDKDWIRFDQSNI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 107 LCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWC 186
Cdd:cd15145   81 LCSVFGICMVFFGLCPLLLGSVMAVERCIGVTKPIFHSTKMTSKHVKMMLSGVCLFAVLVALLPILGHRDYQIQASRTWC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 187 FYNTEHIEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHRQGRSHHLEMVIQLLAIMCVSCVCWSPFL 266
Cdd:cd15145  161 FYKTEHIEDWEDRFYLLLFSFLGLLALAISFLCNAITGITLLRVKFRSQQHRQGRSHHFEMVIQLLAIMCVSCICWSPFL 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 564339259 267 VTMANIAINGNNSPVTCETTLFALRMATWNQILDPWVYILLRKAVLRNLY 316
Cdd:cd15145  241 VTMANIGINGRDSLESCETILFALRMATWNQILDPWVYILLRKAVLKNLY 290
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
44-304 2.35e-18

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 83.50  E-value: 2.35e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259   44 NSLAIAILMkayqRFRRKSKASFLLLASgLVITDFFGHLINGGIAVFVYASDKDWIRfdqSNILCSVFGISMVFSGLCPL 123
Cdd:pfam00001   2 NLLVILVIL----RNKKLRTPTNIFLLN-LAVADLLFSLLTLPFWLVYYLNHGDWPF---GSALCKIVGALFVVNGYASI 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  124 FLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGH-RDYQIQASRTWCFYNTEHIEDWEDRFYL 202
Cdd:pfam00001  74 LLLTAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGwTLTVPEGNVTVCFIDFPEDLSKPVSYTL 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  203 LFFSSLGLLALGISFSCNAVTGVTLLR--VKFRSQQHRQGRSHHLEMVIqllAIMCVSCVCWSPFLVTMANIAINGNNSP 280
Cdd:pfam00001 154 LISVLGFLLPLLVILVCYTLIIRTLRKsaSKQKSSERTQRRRKALKTLA---VVVVVFILCWLPYHIVNLLDSLALDCEL 230
                         250       260
                  ....*....|....*....|....*.
gi 564339259  281 VTCETTLFAL--RMATWNQILDPWVY 304
Cdd:pfam00001 231 SRLLDKALSVtlWLAYVNSCLNPIIY 256
 
Name Accession Description Interval E-value
7tmA_FP cd15145
prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G ...
27-316 0e+00

prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The PGF2-alpha receptor, also called prostanoid FP receptor, is a class A G-protein coupled receptor whose endogenous ligand is prostaglandin F2-alpha. PGF2-alpha binding to this receptor is coupled to the stimulation of phospholipase C (PLC) pathway via G-protein subunit G(q). This leads to the release of inositol trisphosphate (IP3) and diacylglycerol (DAG) which results in increased intracellular Ca2+ levels and activation of PKC. The receptor activation primarily induces uterine contraction and bronchoconstriction, and stimulates luteolysis. Like most prostanoid receptors, the PGF2-alpha receptor has also been implicated in tumor angiogenesis and metastasis.


Pssm-ID: 320273 [Multi-domain]  Cd Length: 290  Bit Score: 514.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  27 RLSVFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNI 106
Cdd:cd15145    1 KLSVFFSIIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGTIAVFVYASDKDWIRFDQSNI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 107 LCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWC 186
Cdd:cd15145   81 LCSVFGICMVFFGLCPLLLGSVMAVERCIGVTKPIFHSTKMTSKHVKMMLSGVCLFAVLVALLPILGHRDYQIQASRTWC 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 187 FYNTEHIEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHRQGRSHHLEMVIQLLAIMCVSCVCWSPFL 266
Cdd:cd15145  161 FYKTEHIEDWEDRFYLLLFSFLGLLALAISFLCNAITGITLLRVKFRSQQHRQGRSHHFEMVIQLLAIMCVSCICWSPFL 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 564339259 267 VTMANIAINGNNSPVTCETTLFALRMATWNQILDPWVYILLRKAVLRNLY 316
Cdd:cd15145  241 VTMANIGINGRDSLESCETILFALRMATWNQILDPWVYILLRKAVLKNLY 290
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
29-316 3.69e-101

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 300.32  E-value: 3.69e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  29 SVFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSkasFLLLASGLVITDFFGHLINGGIAVFVYASDKDWirfDQSNILC 108
Cdd:cd14981    3 SPAPPALMFVFGVLGNLLALIVLARSSKSHKWSV---FYRLVAGLAITDLLGILLTSPVVLAVYASNFEW---DGGQPLC 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 109 SVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCFY 188
Cdd:cd14981   77 DYFGFMMSFFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLPLLGLGSYVLQYPGTWCFL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 189 NTEHiEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFR-------SQQHRQGRSHHLEMVIQLLAIMCVSCVC 261
Cdd:cd14981  157 DFYS-KNTGDAAYAYLYSILGLLILLVTLLCNLLVIITLLRMRRRkkrhrrsRRSARRQKRNEIQMVVLLLAITVVFSVC 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 564339259 262 WSPFLVTMANIAIngNNSPVTCETTLFALRMATWNQILDPWVYILLRKAVLRNLY 316
Cdd:cd14981  236 WLPLMIRVLINAT--GDSEKNGKTDLLAVRMASWNQILDPWVYILLRKEVLRRLY 288
7tmA_PGE2_EP1 cd15144
prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G ...
32-316 8.31e-96

prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP1, also called prostanoid EP1 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. It has been shown that stimulation of the EP1 receptor by PGE2 causes smooth muscle contraction and increased intracellular Ca2+ levels; however, it is still unclear whether EP1 receptor is exclusively coupled to G(q/11), which leading to activation of phospholipase C and phosphatidylinositol hydrolysis. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320272 [Multi-domain]  Cd Length: 294  Bit Score: 287.06  E-value: 8.31e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  32 FSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDqSNILCSVF 111
Cdd:cd15144    6 MPIFSMTLGALSNIVALVILAQSYARFRRRSKATFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEP-RGALCQFF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 112 GISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCFYNTE 191
Cdd:cd15144   85 GACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWCFIKVQ 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 192 HIEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQ---HRQGRSHHLEMVIQLLAIMCVSCVCWSPFLVT 268
Cdd:cd15144  165 PPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLVRARLRKKCscsNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIF 244
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 564339259 269 MAnIAINGNNSP--VTCETTLF-ALRMATWNQILDPWVYILLRKAVLRNLY 316
Cdd:cd15144  245 VL-ISVSRSYERpkHQYEKLLFlGVRLASWNQILDPWVYILLRRAVLRKVL 294
7tmA_TXA2_R cd15143
thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
29-316 3.90e-75

thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The thromboxane receptor, also known as the prostanoid TP receptor, is a class A G-protein coupled receptor whose endogenous ligand is thromboxane A2 (TXA2). TXA2 is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and stimulates platelet aggregation, Ca2+ influx into platelets, and also causes vasoconstriction. TXA2 has been shown to be involved in immune regulation, angiogenesis and metastasis, among many others. Activation of TXA2 receptor is coupled to G(q) and G(13), resulting in the activations of phospholipase C and RhoGEF, respectively. TXA2 receptor is widely distributed in the body and is abundantly expressed in thymus and spleen.


Pssm-ID: 320271 [Multi-domain]  Cd Length: 296  Bit Score: 234.33  E-value: 3.90e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  29 SVFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNILC 108
Cdd:cd15143    3 SVWFSTIFSAIGLASNLFAFIVLVKSSRKTKSRSRSSFLIFLCGLVVTDFLGLLVTGTIVISFHLTNFNWRVVDPDCYLC 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 109 SVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCFY 188
Cdd:cd15143   83 NFMGLSMVFYGLCPLLLGATMAVERFFGINRPFSRSTAMSKRRAWYMVGMVWAFAFLLGLLPILGLGRYTLQYPGSWCFL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 189 NTEHieDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHRQGRSHHLEMVIQLLAIMCVSCVCWSPFLVT 268
Cdd:cd15143  163 TLLF--DSKDVAFGLLFSFLGILSVGLSFLLNTVSVVTLCRVYHDRESVQRRRDSEVEMMVQLLGIMVIASVCWLPLLVF 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 564339259 269 MANIAI--------NGNNSPVTCETTLFALRMATWNQILDPWVYILLRKAVLRNLY 316
Cdd:cd15143  241 IAQTVLqkppamllAGQIPRLTEKKLLIYLRFATWNQILDPWVYILFRRAVLKRLY 296
7tmA_PGE2_EP3 cd15146
prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G ...
28-313 3.23e-63

prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP3, also called prostanoid EP3 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP3 receptor by PGE2 preferentially couples to G(i) protein. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels, which subsequently produces smooth muscle contraction. Knockout mice studies suggest that the EP3 receptor may act as a systemic vasopressor. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320274 [Multi-domain]  Cd Length: 308  Bit Score: 203.96  E-value: 3.23e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  28 LSVFFSIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNIL 107
Cdd:cd15146    2 VSVAFPITMMITGMVGNALAMLLVYRSYRKKENKRKRSFLLCIGSLALTDLFGQLLTSPIVISVYLSDRKWERVDPSGRL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 108 CSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCF 187
Cdd:cd15146   82 CPFFGLCMTVFGLCPLFIASAMAIERALAIRAPHWYSSHMKTRVTKAVLLGIWLAVLAFALLPIAGVGQYTLQWPGTWCF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 188 YNTEHiEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLL-RVKFR---SQQHRQGRSHHLEMVIQLLAIMCVSCVCWS 263
Cdd:cd15146  162 ISTGD-GEPGNNFFASTFASLGLFSLCVTFSCNLATIRALVsRCKTKagaSVSSKQWERITTETLIQLLGIMCVLSACWS 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564339259 264 PFLVTMANIAINGNNS---------------PVTCETTLFALRMATWNQILDPWVYILLRKAVLR 313
Cdd:cd15146  241 PLLVLMLKMISNHTSSehcksatappqstelQKDCNFFLTAVRLASLNQILDPWVYLLLRKILLR 305
7tmA_PGI2 cd15141
prostaglandin I2 receptor, member of the class A family of seven-transmembrane G ...
33-315 2.84e-29

prostaglandin I2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin I2 receptor (also called prostacyclin receptor or prostanoid IP receptor) is a class A, G protein-coupled receptor whose endogenous ligand is prostacyclin, which is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and vascular smooth muscle cells (VSMCs). The PGI2 receptor is coupled to both G(s) and G(q) protein subtypes, resulting in increased cAMP formation, phosphoinositide turnover, and Ca2+ signaling. PGI2 receptor activation by prostacyclin induces VSMC differentiation and produces a potent vasodilation and inhibition of platelet aggregation.


Pssm-ID: 320269 [Multi-domain]  Cd Length: 301  Bit Score: 114.53  E-value: 2.84e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  33 SIIFMTVGIVSNSLAIAILmKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNILCSVFG 112
Cdd:cd15141    7 STLMFAAGVVGNLLALGIL-GVHRKERRTKSSAFCVLVTGLAATDLLGTCFLSPMVFVSYAQNSSLLGLAAGQPLCHLFA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 113 ISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCFYNTEH 192
Cdd:cd15141   86 FAMTFFGLASMLILFAMAVERCLAISHPYFYAQHSGRRLAKLALPAIYAFGALFCALPLLGVGRHKQYCPGTWCFIRMTV 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 193 IEDWEDRFYLLFFSSLGLLALGIS--FSCNAVTGVTLLRVkFRSQQHRQGR--------------SHHLEMVIQLLAIMC 256
Cdd:cd15141  166 PGHREPGSLAFSLLYASLMALLIAaiFLCNGSVTVSLCRM-YRGQKARRGSlrrcgrlgwwlgqgEEEVDHLILLALMTV 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 257 VSCVCWSPFLVTmaniAINGNNSPVTCET-TLFALRMATWNQILDPWVYILLRKAVLRNL 315
Cdd:cd15141  245 IFVVCSLPLTIR----AFLGAIAPDGNESgDLLAFRFSAFNPILDPWIFIIFRKAVFRKL 300
7tmA_PGE2_EP2 cd15139
prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G ...
33-313 1.30e-25

prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP2, also called prostanoid EP2 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP2 receptor by PGE2 causes cAMP accumulation through G(s) protein activation, which subsequently produces smooth muscle relaxation and mediates the systemic vasodepressor response to PGE2. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320267 [Multi-domain]  Cd Length: 299  Bit Score: 104.47  E-value: 1.30e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  33 SIIFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQSNILCSVFG 112
Cdd:cd15139    7 SALMFSAGVLGNVLALVLLERRRRKEVGRRQSLFHVLVTSLVITDLLGTCLISPVVLASYSRNTTLVGMSPNRLVCGYFG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 113 ISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCFYNTEh 192
Cdd:cd15139   87 FAMTFFSLATMLILLAMALERCLSIGHPYFYERYVSKRCGYVTIPLIYLLCALFCLFPFLGFGKYVQYCPGTWCFIDMN- 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 193 IEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHR-------QGRSHHLEMV-----IQLLAIMCVS-C 259
Cdd:cd15139  166 PEASEHRAYANLYATLLLLLIVAVVLCNASVIYHLVRMYRRRKRNRssvggraRSHRRRFSMAeevehLILLVFMTIIfV 245
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 564339259 260 VCWSPFLVTM-ANIAINGNNSpvtcETTLFALRMATWNQILDPWVYILLRKAVLR 313
Cdd:cd15139  246 ICSLPLTIQVyMNTFSDSENH----KWDLIALRFLSVNPIIDPWVFIILSPPVLR 296
7tmA_PGE2_EP4 cd15142
prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G ...
33-315 2.27e-23

prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP4, also called prostanoid EP4 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Like the EP2 receptor, stimulation of the EP4 receptor by PGE2 causes cAMP accumulation through G(s) protein activation. Knockout studies in mice suggest that EP4 receptor may be involved in the maintenance of bone mass and fracture healing. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320270 [Multi-domain]  Cd Length: 302  Bit Score: 98.34  E-value: 2.27e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  33 SIIFMTVGIVSNSLAIAILMKAyqrfRRKSKAS-FLLLASGLVITDFFGHLINGGIAVFVYASDkdwiRFDQSNILCSVF 111
Cdd:cd15142    7 PAVMFIFGVVGNLIAIVVLCKS----RKEQKETtFYTLVCGLAVTDLLGTCLASPVTIATYLKG----RWPGGQPLCEYF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 112 GISMVFSGLCPLFLGSTMAIERCIGVTNPLFHStkitsKHVKMILSGVCMFAVFVA-----LLPILGHRDYQIQASRTWC 186
Cdd:cd15142   79 SFILLFFSLSGLSIICAMSIERYLAINHAYFYN-----HYVDKRLAGLTLFAIYASnilfcALPSMGLGKSKLQYPKTWC 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 187 FYntehieDWEDRF-----YLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQH------------RQGRSHHL---- 245
Cdd:cd15142  154 FI------DWRTNVsvhaaYSYMYAGFSSLLILVTVLCNVLVCGALIRMHRQFVRRtslgtdqrlsdfRRRRSFRRmaga 227
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564339259 246 --EMVIQLLAIMCVSCVCWSPFLVtmaNIAINGNNSPVTCETT-----LFALRMATWNQILDPWVYILLRKAVLRNL 315
Cdd:cd15142  228 eiQMVILLIATSVVVLICSIPLVV---RVFVNQLYQPAVEKDLdknpdLQAIRIASVNPILDPWIYILLRKTVLSKL 301
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
28-307 2.74e-21

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 91.97  E-value: 2.74e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  28 LSVFFSIIFMtVGIVSNSLAIAILMkayqRFRRKSKASFLLLASgLVITDFFGHLINGGIAVFVYASDKDWIrfdqSNIL 107
Cdd:cd00637    1 LAVLYILIFV-VGLVGNLLVILVIL----RNRRLRTVTNYFILN-LAVADLLVGLLVIPFSLVSLLLGRWWF----GDAL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 108 CSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCF 187
Cdd:cd00637   71 CKLLGFLQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 188 YNTEHIedWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFR------SQQHRQGRSHHLEMVIQLLAIMCVSCVC 261
Cdd:cd00637  151 CWPDLT--LSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRirssssNSSRRRRRRRERKVTKTLLIVVVVFLLC 228
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 564339259 262 WSPFLVTMANIAINGNNSPVTCETTLFALRMATWNQILDPWVYILL 307
Cdd:cd00637  229 WLPYFILLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFF 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
44-304 2.35e-18

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 83.50  E-value: 2.35e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259   44 NSLAIAILMkayqRFRRKSKASFLLLASgLVITDFFGHLINGGIAVFVYASDKDWIRfdqSNILCSVFGISMVFSGLCPL 123
Cdd:pfam00001   2 NLLVILVIL----RNKKLRTPTNIFLLN-LAVADLLFSLLTLPFWLVYYLNHGDWPF---GSALCKIVGALFVVNGYASI 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  124 FLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGH-RDYQIQASRTWCFYNTEHIEDWEDRFYL 202
Cdd:pfam00001  74 LLLTAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGwTLTVPEGNVTVCFIDFPEDLSKPVSYTL 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  203 LFFSSLGLLALGISFSCNAVTGVTLLR--VKFRSQQHRQGRSHHLEMVIqllAIMCVSCVCWSPFLVTMANIAINGNNSP 280
Cdd:pfam00001 154 LISVLGFLLPLLVILVCYTLIIRTLRKsaSKQKSSERTQRRRKALKTLA---VVVVVFILCWLPYHIVNLLDSLALDCEL 230
                         250       260
                  ....*....|....*....|....*.
gi 564339259  281 VTCETTLFAL--RMATWNQILDPWVY 304
Cdd:pfam00001 231 SRLLDKALSVtlWLAYVNSCLNPIIY 256
7tmA_PGD2 cd15140
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
29-313 9.17e-16

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor (also called prostanoid DP receptor, DP1, or PGD2R1) is a G-protein coupled receptor whose endogenous ligand is prostaglandin D2 (PGD2). PGD2, the major cyclooxygenase metabolite of arachidonic acid produced by mast cells, mediates inflammatory reactions in response to allergen challenge and causes peripheral vasodilation. PGD2 exerts its biological effects by binding to two types of cell surface receptors: a DP1 receptor that belongs to the prostanoid receptor family and a chemoattractant receptor-homologous molecule expressed on the T-helper type 2 cells (CRTH2 or PD2R2).


Pssm-ID: 320268 [Multi-domain]  Cd Length: 312  Bit Score: 77.24  E-value: 9.17e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  29 SVFFSIIFMTVGIVSNSLAIAILMKAY-----QRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDWIRFDQ 103
Cdd:cd15140    3 SVVSSSLLFAAGLLGNLLALGLLWLHKlhakkQRGGRPRTSVFYVLVTVLTVTDLLGKCLLSPVVLAAYAQNRSLVGLTP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 104 S--NILCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQA 181
Cdd:cd15140   83 AgnLNLCQVFAFLMIFFGLASTFILLAMALECWLSLGHPFFYQRHINKRLGALVSLILYAFCLGFCALPFFGFGRYVQYC 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 182 SRTWCFYNTEHIEDWED-RFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHRQ-----------------GRSH 243
Cdd:cd15140  163 PGTWCFIQMTAEESSTSaLAYSVLYGSLMGLLVLAIVLCNLGIMRNLYQMYRRENEKGIpstdlqgaaafprqqepAGME 242
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564339259 244 HLEMVIqLLAIMCVSCVCWSPFLVTMANIainGNNSPVTCETT-LFALRMATWNQILDPWVYILLRKAVLR 313
Cdd:cd15140  243 ELEHLI-LLALMTVLFTACSLPVIARAYV---GAFKGEKNEAAdLTALRFLSVNSIVDPWIFIIFRTSKFR 309
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
28-186 5.57e-11

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 62.61  E-value: 5.57e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  28 LSVFFSIIFmTVGIVSNSLAIAILMkayqRFRRKSKASFLLLASgLVITDFfGHLINGGIAVFVYASDKDWIRFDqsnIL 107
Cdd:cd14969    3 LAVYLSLIG-VLGVVLNGLVIIVFL----KKKKLRTPLNLFLLN-LALADL-LMSVVGYPLSFYSNLSGRWSFGD---PG 72
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564339259 108 CSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFhSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWC 186
Cdd:cd14969   73 CVIYGFAVTFLGLVSISTLAALAFERYLVIVRPLK-AFRLSKRRALILIAFIWLYGLFWALPPLFGWSSYVPEGGGTSC 150
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
28-269 1.69e-07

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 51.79  E-value: 1.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  28 LSVFFSIIfMTVGIVSNSLAIAILMkayqRFRRKSKASFLLLASgLVITDFFghlinggIAVFV------YASDKDWIrF 101
Cdd:cd14967    2 LAVFLSLI-ILVTVFGNLLVILAVY----RNRRLRTVTNYFIVS-LAVADLL-------VALLVmpfsavYTLLGYWP-F 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 102 DQsnILCSV---FGISMVFSGLCPLFLgstMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQ 178
Cdd:cd14967   68 GP--VLCRFwiaLDVLCCTASILNLCA---ISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDET 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 179 IQASRTWCFYNTEHIEdwedrFYLLFFSSLGLLALGISFSCNAVTGVTLLRvkfrsqqhrqgrshHLEMVIQLLAIMCVS 258
Cdd:cd14967  143 QPSVVDCECEFTPNKI-----YVLVSSVISFFIPLLIMIVLYARIFRVARR--------------ELKAAKTLAIIVGAF 203
                        250
                 ....*....|.
gi 564339259 259 CVCWSPFLVTM 269
Cdd:cd14967  204 LLCWLPFFIIY 214
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
29-315 5.85e-07

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 50.37  E-value: 5.85e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  29 SVFFSIIFMTVGIVSNSLAIAILMKAyqrfRRKSKASFLLLASgLVITDFFGhlingGIAVFVYASDKDWIRFDQSNILC 108
Cdd:cd14972    1 VLVVAIVLGVFIVVENSLVLAAIIKN----RRLHKPMYILIAN-LAAADLLA-----GIAFVFTFLSVLLVSLTPSPATW 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 109 SVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILG-HRDYQIQASrtwCF 187
Cdd:cd14972   71 LLRKGSLVLSLLASAYSLLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLALLPVLGwNCVLCDQES---CS 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 188 YNTEHIedweDRFYLLFFSSLGLLALGISFSCNAVTGVTLLR-VKFRSQQHRQGRSHH----LEMVIQLLAIMCVSCVCW 262
Cdd:cd14972  148 PLGPGL----PKSYLVLILVFFFIALVIIVFLYVRIFWCLWRhANAIAARQEAAVPAQpstsRKLAKTVVIVLGVFLVCW 223
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 564339259 263 SPFLVTMANIAINGNNSPVTCETTLFALrMATWNQILDPWVYILLRKAVLRNL 315
Cdd:cd14972  224 LPLLILLVLDVLCPSVCDIQAVFYYFLV-LALLNSAINPIIYAFRLKEMRRAV 275
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
28-304 1.30e-05

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 46.17  E-value: 1.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  28 LSVFFSIIFMtVGIVSNSLAIailmKAYQRFRRKSKASFLLLASgLVITDFFGHLINGgiAVFVYAS-DKDWIRfdqSNI 106
Cdd:cd15083    3 LGIFILIIGL-IGVVGNGLVI----YAFCRFKSLRTPANYLIIN-LAISDFLMCILNC--PLMVISSfSGRWIF---GKT 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 107 LCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWC 186
Cdd:cd15083   72 GCDMYGFSGGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLPPLFGWSRYVLEGLLTSC 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 187 FYNTEHiEDWEDRFYLLFFSSLGLL--ALGISFSCNAV-------------TGVTLLRVKFRSQQHRQGRSHHLEMVIQL 251
Cdd:cd15083  152 SFDYLS-RDDANRSYVICLLIFGFVlpLLIIIYCYSFIfravrrhekamkeMAKRFSKSELSSPKARRQAEVKTAKIALL 230
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 564339259 252 LAIMCvsCVCWSPFLVtMANIAINGNNSPVTCETTLFALRMATWNQILDPWVY 304
Cdd:cd15083  231 LVLLF--CLAWTPYAV-VALIGQFGYLEVLTPLATAIPAAFAKTSAIYNPVIY 280
7tmA_CysLTR cd15921
cysteinyl leukotriene receptors, member of the class A family of seven-transmembrane G ...
29-323 3.38e-05

cysteinyl leukotriene receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cysteinyl leukotrienes (LTC4, LTD4, and LTE4) are the most potent inflammatory lipid mediators that play an important role in human asthma. They are synthesized in the leucocytes (cells of immune system) from arachidonic acid by the actions of 5-lipoxygenase and induce bronchial constriction through G protein-coupled receptors, CysLTR1 and CysLTR2. Activation of CysLTR1 by LTD4 induces airway smooth muscle contraction and proliferation, eosinophil migration, and damage to the lung tissue. They belong to the class A GPCR superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320587 [Multi-domain]  Cd Length: 283  Bit Score: 45.18  E-value: 3.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  29 SVFFSIIFMtVGIVSNSLAIAILMKAYqrfrrKSKASFLLLASGLVITDFFgHLINGGIAVFVYASDKDWIRFDqsnILC 108
Cdd:cd15921    4 PTAYILIFI-LGLTGNSISVYVFLSQY-----RSQTPVSVLMVNLAISDLL-LVCTLPLRLTYYVLNSHWPFGD---IAC 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 109 SVFGISMVFSGLCPLFLGSTMAIERCIGVTNPlFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQIQASRTWCFY 188
Cdd:cd15921   74 RIILYVLYVNMYSSIYFLTALSVFRYLALVWP-YLYLRVQTHSVAGIICGLIWILMGLASSPLLFAKSKQHDEGSTRCLE 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259 189 NTEHIEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVTLLRVKFRSQQHRQGRSHHLEMVIQLLAIMcvsCVCWSPFlvt 268
Cdd:cd15921  153 LAHDAVDKLLLINYVTLPVGFVVPFMTVIFCYIFIIKNLLKPSPALGRTRPSRRKACALIIISLGIF---LVCFLPY--- 226
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 564339259 269 maniaingnnspvtceTTLFALRMATWNQILDPWVYIL-LRKAVLRNLYKLASRCC 323
Cdd:cd15921  227 ----------------HIVRTIHLITERQIKESCGYILrVRKAAVITLCLAASNSC 266
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
38-173 1.78e-04

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 42.61  E-value: 1.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  38 TVGIVS---NSLAIAILMkayqRFRRKSKASFLLLASGLVITDFF--GHLINGGIAVFVYASD-----KDWIRfdqsNIL 107
Cdd:cd14980    9 IIGILAligNILVIIWHI----SSKKKKKKVPKLLIINLAIADFLmgIYLLIIAIADQYYRGRyaqysEEWLR----SPP 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564339259 108 CSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPlFHSTKITSKHVKMILSGVCMFAVFVALLPILG 173
Cdd:cd14980   81 CLLACFLVSLSSLMSVLMMLLITLDRYICIVYP-FSNKRLSYKSAKIILILGWLFSIIFAAIPILY 145
7tmA_Glyco_hormone_R cd15136
glycoprotein hormone receptors, member of the class A family of seven-transmembrane G ...
103-178 1.19e-03

glycoprotein hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors (GPHRs) are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG) and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. GPHRs couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein.


Pssm-ID: 320264 [Multi-domain]  Cd Length: 275  Bit Score: 40.28  E-value: 1.19e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564339259 103 QSNILCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFAVFVALLPILGHRDYQ 178
Cdd:cd15136   75 QTGAGCKTAGFLAVFSSELSVFTLTVITLERWYAITHAMHLNKRLSLRQAAIIMLGGWIFALIMALLPLVGVSSYS 150
7tmA_CysLTR1 cd15158
cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G ...
29-187 1.59e-03

cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cysteinyl leukotrienes (LTC4, LTD4, and LTE4) are the most potent inflammatory lipid mediators that play an important role in human asthma. They are synthesized in the leucocytes (cells of immune system) from arachidonic acid by the actions of 5-lipoxygenase and induce bronchial constriction through G protein-coupled receptors, CysLTR1 and CysLTR2. Activation of CysLTR1 by LTD4 induces airway smooth muscle contraction and proliferation, eosinophil migration, and damage to the lung tissue. They belong to the class A GPCR superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320286 [Multi-domain]  Cd Length: 285  Bit Score: 39.73  E-value: 1.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  29 SVFFSIIFMtVGIVSNSLAIAILMKAYQRfrrksKASFLLLASGLVITDFFgHLINGGIAVFVYASDKDWirfDQSNILC 108
Cdd:cd15158    4 STLYSVITV-FGLVGNGFALYVLIKTYRQ-----KSAFHIYMLNLAVSDLL-CVCTLPLRVVYYVHKGQW---LFGDFLC 73
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564339259 109 SVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCMFaVFVALLPILGHRDYQIQASRTWCF 187
Cdd:cd15158   74 RISSYALYVNLYCSIYFMTAMSFTRFLAIVFPVQNLNLVTVKKARIVCVGIWIF-VTLTSSPFLMSGSHDTETNKTKCF 151
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
28-177 3.67e-03

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 38.74  E-value: 3.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564339259  28 LSVFFSIIFMtVGIVSNSLAIAILMkayqRFRRKSKASFLLLASgLVITDFFGHLINGGIAvFVYASDKDWIrFdqSNIL 107
Cdd:cd15203    3 LILLYGLIIV-LGVVGNLLVIYVVL----RNKSMQTVTNIFILN-LAVSDLLLCLVSLPFT-LIYTLTKNWP-F--GSIL 72
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564339259 108 C----SVFGISMVFSglcPLFLgSTMAIERCIGVTNPLfhSTKITSKHVKMILSGVCMFAVFVAlLPILGHRDY 177
Cdd:cd15203   73 CklvpSLQGVSIFVS---TLTL-TAIAIDRYQLIVYPT--RPRMSKRHALLIIALIWILSLLLS-LPLAIFQEL 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH