|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
740-969 |
3.36e-65 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 221.76 E-value: 3.36e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 740 SKYFGRGIMIAILVNTLSMGIEYHEQPEE-LTNALEISNIVFTSLFALEMLLKLLVYGPFG-YIKNPYNIFDGVIVVISV 817
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKrYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 818 WEIV---GQQGGGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERD 894
Cdd:pfam00520 81 ISLVlssVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWEN 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528995573 895 GDtlPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSS-WAALYFIALMTFGNYVLFNLLVAILVEGFQTEE 969
Cdd:pfam00520 161 PD--NGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGEfWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1273-1545 |
5.13e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.48 E-value: 5.13e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1273 HKMFDHVVLVIIFLNCITIAMERPKIDPHSAErIFLTLSNYIFTAVFLAEMTVKVVALGWCFgeqAYLRSSWNVLDGLLV 1352
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT-TVLEILDYVFTGIFTLEMLLKIIAAGFKK---RYFRSPWNILDFVVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1353 LISIIDILVSMVSdsgtkILGMLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLF 1432
Cdd:pfam00520 77 LPSLISLVLSSVG-----SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1433 KGKFFVCQGEDTRNitnksdcaeasyrwvrhkYNFDNLGQALMSLFVLASKDGWVDIMYDGLDAVGvdqqpimnhNPWML 1512
Cdd:pfam00520 152 GGKLKTWENPDNGR------------------TNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG---------EFWAY 204
|
250 260 270
....*....|....*....|....*....|...
gi 528995573 1513 LYFISFLLIVAFFVLNMFVGVVVENFHKCRQHQ 1545
Cdd:pfam00520 205 IYFVSFIILGGFLLLNLFIAVIIDNFQELTERT 237
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1590-1831 |
1.99e-50 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 179.39 E-value: 1.99e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1590 SHYLDLFITGVIGLNVVTMAMEHYQQPQ-ILDEALKICNYIFTVIFVLESVFKLVAFGF-RRFFQDRWNQLDLAIVLLSI 1667
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1668 MGITLEEIEvnaslpiNPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGD 1747
Cdd:pfam00520 81 ISLVLSSVG-------SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1748 lecDETHPCEGLGRHATFRNFGMAFLTLFRVSTGDNWNGIMKDTLRDCDqestcynTVISPIYFVSFVLTAQFVLVNVVI 1827
Cdd:pfam00520 154 ---KLKTWENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG-------EFWAYIYFVSFIILGGFLLLNLFI 223
|
....
gi 528995573 1828 AVLM 1831
Cdd:pfam00520 224 AVII 227
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
80-406 |
1.32e-42 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 156.66 E-value: 1.32e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 80 NPWFERISMLVILLNCVTLGMFRPCEDiacDSQRCRILQAFDDFIFAFFAVEMVVKMVALGIfgKKCYLGDTWNRLDFFI 159
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP---EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGF--KKRYFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 160 VIAGMLEYSLDLQN--VSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCffvffifgivgvqLWAGLL 237
Cdd:pfam00520 76 VLPSLISLVLSSVGslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLL-------------LLFLFI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 238 rnrcflpenFSLplsvdleryyqtenedenpficsqpreNGMrscrsvptlrgdggggppcgldyeaynsssnttcvnwn 317
Cdd:pfam00520 143 ---------FAI---------------------------IGY-------------------------------------- 148
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 318 QYYTNCSAGEHNPFKGAINFDNIGYAWIAIFQVITLEGWVDIMYFVMDA-HSFYNFIYFILLIIVGSFFMINLCLVVIAT 396
Cdd:pfam00520 149 QLFGGKLKTWENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGkGEFWAYIYFVSFIILGGFLLLNLFIAVIID 228
|
330
....*....|
gi 528995573 397 QFSETKQRES 406
Cdd:pfam00520 229 NFQELTERTE 238
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
1983-2250 |
2.95e-09 |
|
transcriptional regulator ICP4; Provisional
The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 62.88 E-value: 2.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1983 PQLPKDAPHLLQPHGAPTWGTIPKLPPPGRSPLAQRPLRRQAAIRTDSLDIQGLGSREDLLSEVSGPSPPLARAS---SF 2059
Cdd:PHA03307 90 WSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASdaaSS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2060 WGHSSTQA--QQHSRSQSKILKHMPPSAP-------CPGPELKWAKGPPETRSSLELDTEL-----SWISGDLLPTDSQE 2125
Cdd:PHA03307 170 RQAALPLSspEETARAPSSPPAEPPPSTPpaaasprPPRRSSPISASASSPAPAPGRSAADdagasSSDSSSSESSGCGW 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2126 EAPSARDLKKCYSVEAQSCPRRPASWLDEQRRHSIAVScldSGSQPALGPDPS-SLGGQPLGGAGSRPKKKLSP-PSISI 2203
Cdd:PHA03307 250 GPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASS---SSSPRERSPSPSpSSPGSGPAPSSPRASSSSSSsRESSS 326
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 528995573 2204 DPPESQSQGPRPPPSPGVCLRRRAPSSDSKDPLASGPPDSMAASPSP 2250
Cdd:PHA03307 327 SSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
|
|
| PRK11633 super family |
cl25866 |
cell division protein DedD; Provisional |
534-616 |
1.88e-03 |
|
cell division protein DedD; Provisional
The actual alignment was detected with superfamily member PRK11633:
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.30 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 534 PPSTPAL-SRGPPGGAEAVHSFYHADCHLEPVRCQAPPPrsPSEASGRTVDSGKVYPtvhTSPPPEMLKEKALMEVAPAS 612
Cdd:PRK11633 57 PAATQALpTQPPEGAAEAVRAGDAAAPSLDPATVAPPNT--PVEPEPAPVEPPKPKP---VEKPKPKPKPQQKVEAPPAP 131
|
....
gi 528995573 613 GPTT 616
Cdd:PRK11633 132 KPEP 135
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
740-969 |
3.36e-65 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 221.76 E-value: 3.36e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 740 SKYFGRGIMIAILVNTLSMGIEYHEQPEE-LTNALEISNIVFTSLFALEMLLKLLVYGPFG-YIKNPYNIFDGVIVVISV 817
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKrYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 818 WEIV---GQQGGGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERD 894
Cdd:pfam00520 81 ISLVlssVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWEN 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528995573 895 GDtlPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSS-WAALYFIALMTFGNYVLFNLLVAILVEGFQTEE 969
Cdd:pfam00520 161 PD--NGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGEfWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1273-1545 |
5.13e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.48 E-value: 5.13e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1273 HKMFDHVVLVIIFLNCITIAMERPKIDPHSAErIFLTLSNYIFTAVFLAEMTVKVVALGWCFgeqAYLRSSWNVLDGLLV 1352
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT-TVLEILDYVFTGIFTLEMLLKIIAAGFKK---RYFRSPWNILDFVVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1353 LISIIDILVSMVSdsgtkILGMLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLF 1432
Cdd:pfam00520 77 LPSLISLVLSSVG-----SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1433 KGKFFVCQGEDTRNitnksdcaeasyrwvrhkYNFDNLGQALMSLFVLASKDGWVDIMYDGLDAVGvdqqpimnhNPWML 1512
Cdd:pfam00520 152 GGKLKTWENPDNGR------------------TNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG---------EFWAY 204
|
250 260 270
....*....|....*....|....*....|...
gi 528995573 1513 LYFISFLLIVAFFVLNMFVGVVVENFHKCRQHQ 1545
Cdd:pfam00520 205 IYFVSFIILGGFLLLNLFIAVIIDNFQELTERT 237
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1590-1831 |
1.99e-50 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 179.39 E-value: 1.99e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1590 SHYLDLFITGVIGLNVVTMAMEHYQQPQ-ILDEALKICNYIFTVIFVLESVFKLVAFGF-RRFFQDRWNQLDLAIVLLSI 1667
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1668 MGITLEEIEvnaslpiNPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGD 1747
Cdd:pfam00520 81 ISLVLSSVG-------SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1748 lecDETHPCEGLGRHATFRNFGMAFLTLFRVSTGDNWNGIMKDTLRDCDqestcynTVISPIYFVSFVLTAQFVLVNVVI 1827
Cdd:pfam00520 154 ---KLKTWENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG-------EFWAYIYFVSFIILGGFLLLNLFI 223
|
....
gi 528995573 1828 AVLM 1831
Cdd:pfam00520 224 AVII 227
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
80-406 |
1.32e-42 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 156.66 E-value: 1.32e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 80 NPWFERISMLVILLNCVTLGMFRPCEDiacDSQRCRILQAFDDFIFAFFAVEMVVKMVALGIfgKKCYLGDTWNRLDFFI 159
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP---EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGF--KKRYFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 160 VIAGMLEYSLDLQN--VSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCffvffifgivgvqLWAGLL 237
Cdd:pfam00520 76 VLPSLISLVLSSVGslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLL-------------LLFLFI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 238 rnrcflpenFSLplsvdleryyqtenedenpficsqpreNGMrscrsvptlrgdggggppcgldyeaynsssnttcvnwn 317
Cdd:pfam00520 143 ---------FAI---------------------------IGY-------------------------------------- 148
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 318 QYYTNCSAGEHNPFKGAINFDNIGYAWIAIFQVITLEGWVDIMYFVMDA-HSFYNFIYFILLIIVGSFFMINLCLVVIAT 396
Cdd:pfam00520 149 QLFGGKLKTWENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGkGEFWAYIYFVSFIILGGFLLLNLFIAVIID 228
|
330
....*....|
gi 528995573 397 QFSETKQRES 406
Cdd:pfam00520 229 NFQELTERTE 238
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1983-2250 |
2.95e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 62.88 E-value: 2.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1983 PQLPKDAPHLLQPHGAPTWGTIPKLPPPGRSPLAQRPLRRQAAIRTDSLDIQGLGSREDLLSEVSGPSPPLARAS---SF 2059
Cdd:PHA03307 90 WSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASdaaSS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2060 WGHSSTQA--QQHSRSQSKILKHMPPSAP-------CPGPELKWAKGPPETRSSLELDTEL-----SWISGDLLPTDSQE 2125
Cdd:PHA03307 170 RQAALPLSspEETARAPSSPPAEPPPSTPpaaasprPPRRSSPISASASSPAPAPGRSAADdagasSSDSSSSESSGCGW 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2126 EAPSARDLKKCYSVEAQSCPRRPASWLDEQRRHSIAVScldSGSQPALGPDPS-SLGGQPLGGAGSRPKKKLSP-PSISI 2203
Cdd:PHA03307 250 GPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASS---SSSPRERSPSPSpSSPGSGPAPSSPRASSSSSSsRESSS 326
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 528995573 2204 DPPESQSQGPRPPPSPGVCLRRRAPSSDSKDPLASGPPDSMAASPSP 2250
Cdd:PHA03307 327 SSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
534-616 |
1.88e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.30 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 534 PPSTPAL-SRGPPGGAEAVHSFYHADCHLEPVRCQAPPPrsPSEASGRTVDSGKVYPtvhTSPPPEMLKEKALMEVAPAS 612
Cdd:PRK11633 57 PAATQALpTQPPEGAAEAVRAGDAAAPSLDPATVAPPNT--PVEPEPAPVEPPKPKP---VEKPKPKPKPQQKVEAPPAP 131
|
....
gi 528995573 613 GPTT 616
Cdd:PRK11633 132 KPEP 135
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
740-969 |
3.36e-65 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 221.76 E-value: 3.36e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 740 SKYFGRGIMIAILVNTLSMGIEYHEQPEE-LTNALEISNIVFTSLFALEMLLKLLVYGPFG-YIKNPYNIFDGVIVVISV 817
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKrYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 818 WEIV---GQQGGGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERD 894
Cdd:pfam00520 81 ISLVlssVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWEN 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528995573 895 GDtlPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSS-WAALYFIALMTFGNYVLFNLLVAILVEGFQTEE 969
Cdd:pfam00520 161 PD--NGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGEfWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1273-1545 |
5.13e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.48 E-value: 5.13e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1273 HKMFDHVVLVIIFLNCITIAMERPKIDPHSAErIFLTLSNYIFTAVFLAEMTVKVVALGWCFgeqAYLRSSWNVLDGLLV 1352
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT-TVLEILDYVFTGIFTLEMLLKIIAAGFKK---RYFRSPWNILDFVVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1353 LISIIDILVSMVSdsgtkILGMLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLF 1432
Cdd:pfam00520 77 LPSLISLVLSSVG-----SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1433 KGKFFVCQGEDTRNitnksdcaeasyrwvrhkYNFDNLGQALMSLFVLASKDGWVDIMYDGLDAVGvdqqpimnhNPWML 1512
Cdd:pfam00520 152 GGKLKTWENPDNGR------------------TNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG---------EFWAY 204
|
250 260 270
....*....|....*....|....*....|...
gi 528995573 1513 LYFISFLLIVAFFVLNMFVGVVVENFHKCRQHQ 1545
Cdd:pfam00520 205 IYFVSFIILGGFLLLNLFIAVIIDNFQELTERT 237
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1590-1831 |
1.99e-50 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 179.39 E-value: 1.99e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1590 SHYLDLFITGVIGLNVVTMAMEHYQQPQ-ILDEALKICNYIFTVIFVLESVFKLVAFGF-RRFFQDRWNQLDLAIVLLSI 1667
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1668 MGITLEEIEvnaslpiNPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGD 1747
Cdd:pfam00520 81 ISLVLSSVG-------SLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1748 lecDETHPCEGLGRHATFRNFGMAFLTLFRVSTGDNWNGIMKDTLRDCDqestcynTVISPIYFVSFVLTAQFVLVNVVI 1827
Cdd:pfam00520 154 ---KLKTWENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG-------EFWAYIYFVSFIILGGFLLLNLFI 223
|
....
gi 528995573 1828 AVLM 1831
Cdd:pfam00520 224 AVII 227
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
80-406 |
1.32e-42 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 156.66 E-value: 1.32e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 80 NPWFERISMLVILLNCVTLGMFRPCEDiacDSQRCRILQAFDDFIFAFFAVEMVVKMVALGIfgKKCYLGDTWNRLDFFI 159
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP---EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGF--KKRYFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 160 VIAGMLEYSLDLQN--VSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCffvffifgivgvqLWAGLL 237
Cdd:pfam00520 76 VLPSLISLVLSSVGslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLL-------------LLFLFI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 238 rnrcflpenFSLplsvdleryyqtenedenpficsqpreNGMrscrsvptlrgdggggppcgldyeaynsssnttcvnwn 317
Cdd:pfam00520 143 ---------FAI---------------------------IGY-------------------------------------- 148
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 318 QYYTNCSAGEHNPFKGAINFDNIGYAWIAIFQVITLEGWVDIMYFVMDA-HSFYNFIYFILLIIVGSFFMINLCLVVIAT 396
Cdd:pfam00520 149 QLFGGKLKTWENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGkGEFWAYIYFVSFIILGGFLLLNLFIAVIID 228
|
330
....*....|
gi 528995573 397 QFSETKQRES 406
Cdd:pfam00520 229 NFQELTERTE 238
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1983-2250 |
2.95e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 62.88 E-value: 2.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1983 PQLPKDAPHLLQPHGAPTWGTIPKLPPPGRSPLAQRPLRRQAAIRTDSLDIQGLGSREDLLSEVSGPSPPLARAS---SF 2059
Cdd:PHA03307 90 WSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASdaaSS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2060 WGHSSTQA--QQHSRSQSKILKHMPPSAP-------CPGPELKWAKGPPETRSSLELDTEL-----SWISGDLLPTDSQE 2125
Cdd:PHA03307 170 RQAALPLSspEETARAPSSPPAEPPPSTPpaaasprPPRRSSPISASASSPAPAPGRSAADdagasSSDSSSSESSGCGW 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2126 EAPSARDLKKCYSVEAQSCPRRPASWLDEQRRHSIAVScldSGSQPALGPDPS-SLGGQPLGGAGSRPKKKLSP-PSISI 2203
Cdd:PHA03307 250 GPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASS---SSSPRERSPSPSpSSPGSGPAPSSPRASSSSSSsRESSS 326
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 528995573 2204 DPPESQSQGPRPPPSPGVCLRRRAPSSDSKDPLASGPPDSMAASPSP 2250
Cdd:PHA03307 327 SSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1859-2250 |
1.98e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 60.18 E-value: 1.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1859 SPQAPSPLGSPFLWPGVEGPDSPGSPKPGAPHATPHTGAASrfslehpmmesHPEEVPVMLGPDLLTVRKSGVSRTHSLP 1938
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTP-----------PPASPPPSPAPDLSEMLRPVGSPGPPPA 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1939 NDSYMCRDGSTAEGSLGHRGWGLPRAQSGSILSVHSQPADTSYIPqlPKDAPHLLQPHGAPTWGTIPKLPPPGRSPLAQR 2018
Cdd:PHA03307 150 ASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPP--PSTPPAAASPRPPRRSSPISASASSPAPAPGRS 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2019 PLRRQAAIRTDSLDIQGLGSREDLLSEVSGPSPPLA------RASSFWGHSSTQAQqHSRSQSkilkhmPPSAPCPGPEL 2092
Cdd:PHA03307 228 AADDAGASSSDSSSSESSGCGWGPENECPLPRPAPItlptriWEASGWNGPSSRPG-PASSSS------SPRERSPSPSP 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2093 KWAKGPPETRSSLELDTELSWISGDLLPTDSQEEAPSARdlkkcySVEAQSCPRRPASwldeqrrhsiavsclDSGSQPA 2172
Cdd:PHA03307 301 SSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGA------AVSPGPSPSRSPS---------------PSRPPPP 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2173 LGPDPSSLGGQP--LGGAGSRPKKKLSPPSISIDPPESQSQGPRPPPSPGVCLRRRAPSSD--SKDPLASGPPDSMAASP 2248
Cdd:PHA03307 360 ADPSSPRKRPRPsrAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGaaSGAFYARYPLLTPSGEP 439
|
..
gi 528995573 2249 SP 2250
Cdd:PHA03307 440 WP 441
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1859-2248 |
2.11e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.95 E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1859 SPQAP-SPLGSPflwPGVEGPdSPGSPKPGAPHATPHTGAASRFSLEHPMMESHPEEVPVMLGPDLLTVRKSGVSRthsl 1937
Cdd:PHA03247 2597 RPRAPvDDRGDP---RGPAPP-SPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRAR---- 2668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1938 pndsymcRDGSTAEGSLGHRGWgLPRAQSGSILSVHSQpADTSYIPQLPKDAPHLLQP------------HGAPTWGTIP 2005
Cdd:PHA03247 2669 -------RLGRAAQASSPPQRP-RRRAARPTVGSLTSL-ADPPPPPPTPEPAPHALVSatplppgpaaarQASPALPAAP 2739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2006 KLPPPGRSPLAQRPLRRQAAIRTDSldiqGLGSREDLLSEVSGPSPPLARASSFWGHSSTQAQQHSRSQSKILKHMPPSA 2085
Cdd:PHA03247 2740 APPAVPAGPATPGGPARPARPPTTA----GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPA 2815
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2086 PCPGPELKWAKGPPETRSSLeldtelswisgdllPT-DSQEEAPSARDLKKCYSVE-----AQSCPRRPASWLDEQRRHs 2159
Cdd:PHA03247 2816 AALPPAASPAGPLPPPTSAQ--------------PTaPPPPPGPPPPSLPLGGSVApggdvRRRPPSRSPAAKPAAPAR- 2880
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2160 IAVSCLdsgSQPALGPDPSSLGGQPLGGAGSRPKKKLSPPSISIDPPESQSQGPRPPPSPgvclRRRAPSSDSKDPLASG 2239
Cdd:PHA03247 2881 PPVRRL---ARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP----RPQPPLAPTTDPAGAG 2953
|
....*....
gi 528995573 2240 PPDSMAASP 2248
Cdd:PHA03247 2954 EPSGAVPQP 2962
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1625-1836 |
1.25e-07 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 54.59 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1625 ICNYIFTVIFVLESVFKLVAFGfRRFFQDRWNQLDLAIVLLSIMGITL---EEIEVNA---SLPINP------------- 1685
Cdd:pfam08016 15 IVFVVFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVLIVLniyRDFLADRlikSVEASPvtfidfdrvaqld 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1686 TIIRIMR----VLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGdlecdeTHpceglgr 1761
Cdd:pfam08016 94 NLYRIILaflvFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFG------TQ------- 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528995573 1762 HATFRNFGMAFLTLFRVSTGD-NWNGIMKDtlrdcdqestcyNTVISPIYFVSFVLTAQFVLVNVVIAVLMKHLEE 1836
Cdd:pfam08016 161 APNFSNFVKSILTLFRTILGDfGYNEIFSG------------NRVLGPLLFLTFVFLVIFILLNLFLAIINDSYVE 224
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1861-2257 |
1.25e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1861 QAPSPLGSPFLWPGVEGPDSPGSPKPGAPhATPHTGAASRFSLEHPMMESHPEEVPVMLGPDLLTVRKSG---------- 1930
Cdd:PHA03247 2481 RRPAEARFPFAAGAAPDPGGGGPPDPDAP-PAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDAGdpppplppaa 2559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1931 --VSRTHSLPNDSYMCRDGSTAEGSLGHRGwglpraqsgsilSVHSQPAdTSYIPQLPKDAPHL-LQPHGAPTWGTIPKL 2007
Cdd:PHA03247 2560 ppAAPDRSVPPPRPAPRPSEPAVTSRARRP------------DAPPQSA-RPRAPVDDRGDPRGpAPPSPLPPDTHAPDP 2626
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2008 PPPGRSPLAQRPLRRQ--AAIRTDSLDIQGLGSREDLLSEVSGPSPPLARASSFWGHSSTQAQQHSRSQSKILK-HMPPS 2084
Cdd:PHA03247 2627 PPPSPSPAANEPDPHPppTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADpPPPPP 2706
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2085 APCPGPElKWAKGPPETRSSLELDTELSWISGDLLP--------TDSQEEAPSARDLKKcySVEAQSCPRRPASwlDEQR 2156
Cdd:PHA03247 2707 TPEPAPH-ALVSATPLPPGPAAARQASPALPAAPAPpavpagpaTPGGPARPARPPTTA--GPPAPAPPAAPAA--GPPR 2781
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2157 RHSIAVSCLDSGSQPAL--GPDPSS-----LGGQPLGGAGSRPKKKLSPPSISIDPPESQSQGPRPPP-------SPGVC 2222
Cdd:PHA03247 2782 RLTRPAVASLSESRESLpsPWDPADppaavLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvAPGGD 2861
|
410 420 430
....*....|....*....|....*....|....*..
gi 528995573 2223 LRRRAPS-SDSKDPLASG-PPDSMAASPSPKKDVLSL 2257
Cdd:PHA03247 2862 VRRRPPSrSPAAKPAAPArPPVRRLARPAVSRSTESF 2898
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1857-2237 |
4.34e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1857 TLSPQAPSPLGSPFLWPGVEGPDSPGSPKPGAPHATPHTGAAS-RFSLEHPMMESHPEEVPVMLGPDLLTVRKSGVSRTH 1935
Cdd:PHA03247 2748 PATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASlSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP 2827
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1936 SLPNDSYMCRDGSTAEG----SLGHRGW---GLPRAQSGSILSVHSQPADTSYI-------PQLPKDAPHLLQPHGAPTW 2001
Cdd:PHA03247 2828 LPPPTSAQPTAPPPPPGppppSLPLGGSvapGGDVRRRPPSRSPAAKPAAPARPpvrrlarPAVSRSTESFALPPDQPER 2907
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2002 GTIPKLPPPGR-SPLAQRPLRRQAAIRTDSLdiqglgsredllsevsgPSPPLARASSfwghSSTQAQQHSRSQSKILKH 2080
Cdd:PHA03247 2908 PPQPQAPPPPQpQPQPPPPPQPQPPPPPPPR-----------------PQPPLAPTTD----PAGAGEPSGAVPQPWLGA 2966
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2081 MPPS--------APCPGPELKWAKGPPETRSSLELDTELSWISGDLLPTDSqeeAPSARDLKKCYsveaqscprrpasWL 2152
Cdd:PHA03247 2967 LVPGrvavprfrVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEET---DPPPVSLKQTL-------------WP 3030
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2153 DEQRRHSIAVSCLDSGSQP----ALGPDPSSLGGQPLGGAGSRPkkklsPPSISIDPPESQSqGPrPPPSPGVCLRRRAP 2228
Cdd:PHA03247 3031 PDDTEDSDADSLFDSDSERsdleALDPLPPEPHDPFAHEPDPAT-----PEAGARESPSSQF-GP-PPLSANAALSRRYV 3103
|
....*....
gi 528995573 2229 SSDSKDPLA 2237
Cdd:PHA03247 3104 RSTGRSALA 3112
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1856-2236 |
5.63e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.63 E-value: 5.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1856 KTLSPQAPSPLGSPFLWPGVEGPDSPGSP------KPGAPHATPHTGAASRFSLEHPMMESHPEEVPVMLGPDLLTVRKS 1929
Cdd:PHA03307 119 PTPPPASPPPSPAPDLSEMLRPVGSPGPPpaasppAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTP 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1930 GVSRTHSLPNDSYMCRDGSTAEGSLGHRGWGLPRAQSGSIlSVHSQPADTSYIPQ----LPKDAPHLL--QPHGAPTWGT 2003
Cdd:PHA03307 199 PAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSD-SSSSESSGCGWGPEnecpLPRPAPITLptRIWEASGWNG 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2004 IPKLPPPGRSPLAQRPLRRQAAIRTDSldiqglgsredllsevSGPSPPLARASSFWGHSSTQAQQHSRSQSkilkhmPP 2083
Cdd:PHA03307 278 PSSRPGPASSSSSPRERSPSPSPSSPG----------------SGPAPSSPRASSSSSSSRESSSSSTSSSS------ES 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2084 SAPC---PGPELKWAKGPPETRSSleldtelswisgdlLPTDSQEEAPSARDLKKCYSVEAQSCPRRPASWL---DEQRR 2157
Cdd:PHA03307 336 SRGAavsPGPSPSRSPSPSRPPPP--------------ADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAvagRARRR 401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2158 HSiavscldSGSQPALGPDPSSLGGQPLGGAGSRPKKKLSPpsiSIDP-PESqsqgprPPPSPGVClrRRAPSSDSKDPL 2236
Cdd:PHA03307 402 DA-------TGRFPAGRPRPSPLDAGAASGAFYARYPLLTP---SGEPwPGS------PPPPPGRV--RYGGLGDSRPGL 463
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2082-2268 |
1.63e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.09 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2082 PPSAPCPGPElkwAKGPPETRSSLELDTELSWISGDLLPTDSQEEAPSARDLKKCYSVEAQSCPRRPASWLDEQRRHSIA 2161
Cdd:PHA03307 67 PPTGPPPGPG---TEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2162 VSCLDSGSQPALG-PDPSSLGGQPLGGAGSRPKKKLSPPSISIDPPESQSQG--PRPPPSPGvCLRRRAPSSDSKDPLAS 2238
Cdd:PHA03307 144 PGPPPAASPPAAGaSPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPstPPAAASPR-PPRRSSPISASASSPAP 222
|
170 180 190
....*....|....*....|....*....|
gi 528995573 2239 GPPDSMAASPSPKkdvlSLSGLSSDPADLD 2268
Cdd:PHA03307 223 APGRSAADDAGAS----SSDSSSSESSGCG 248
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1997-2269 |
9.53e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 9.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 1997 GAPTwgtiPKLPPPGRSPLAQRPL-RRQAAIRTDSLDIQGLGSREDLLSEVSGPSPPLARASSFWGHSSTQAqqhsrsqs 2075
Cdd:PHA03247 2549 GDPP----PPLPPAAPPAAPDRSVpPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP-------- 2616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2076 kilkhMPPSAPCPGPelkwakgPPETRSSLEldTELSWISGDLLPTDSQ-EEAPSARDLKKCYSVEAQSCPRRPASWLDE 2154
Cdd:PHA03247 2617 -----LPPDTHAPDP-------PPPSPSPAA--NEPDPHPPPTVPPPERpRDDPAPGRVSRPRRARRLGRAAQASSPPQR 2682
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2155 QRRHSI--AVSCLDSGSQPALGPDPSSLGGQPLGGAGSRPKKKLSPPSISIDPPESqsqgPRPPPSPGVCLRRRAPSSDS 2232
Cdd:PHA03247 2683 PRRRAArpTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA----PAPPAVPAGPATPGGPARPA 2758
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 528995573 2233 KDPLASGPPDSM-----AASPSPKKDVLSLSGLS----SDPADLDP 2269
Cdd:PHA03247 2759 RPPTTAGPPAPAppaapAAGPPRRLTRPAVASLSesreSLPSPWDP 2804
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2117-2264 |
1.19e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 2117 DLLPTDSQEEAPSARDLKKCYSVE-AQSCPRR-------PASWLDEQRRHSIAVSCLDSGSQPALGPDPSSLGGQPLGGA 2188
Cdd:PHA03307 34 DLLSGSQGQLVSDSAELAAVTVVAgAAACDRFepptgppPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSS 113
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 528995573 2189 GSRPKKKLSPPSISIDPPESQSQGPRPPPSPGvclrRRAPSSDSKDPLASGPPDSMAASPSPKKDVLSLSGLSSDP 2264
Cdd:PHA03307 114 PDPPPPTPPPASPPPSPAPDLSEMLRPVGSPG----PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARA 185
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
534-616 |
1.88e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.30 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 534 PPSTPAL-SRGPPGGAEAVHSFYHADCHLEPVRCQAPPPrsPSEASGRTVDSGKVYPtvhTSPPPEMLKEKALMEVAPAS 612
Cdd:PRK11633 57 PAATQALpTQPPEGAAEAVRAGDAAAPSLDPATVAPPNT--PVEPEPAPVEPPKPKP---VEKPKPKPKPQQKVEAPPAP 131
|
....
gi 528995573 613 GPTT 616
Cdd:PRK11633 132 KPEP 135
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
836-967 |
2.35e-03 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 41.88 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528995573 836 LMRVLKLVRFlpalQRQLVVLMKTM----DNVATFCMLLMLFIFIFSILGMHLFGCKFAserdgdtlpdrkNFDSLLWAI 911
Cdd:pfam08016 108 WLKLFKVLRF----NKTMSLFTKTLsrawKDLAGFALMFVIFFFAYAQFGYLLFGTQAP------------NFSNFVKSI 171
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 528995573 912 VTVFQILtqedWNKVLYNGMASTSSW-AALYFIALMTFGNYVLFNLLVAILVEGFQT 967
Cdd:pfam08016 172 LTLFRTI----LGDFGYNEIFSGNRVlGPLLFLTFVFLVIFILLNLFLAIINDSYVE 224
|
|
| |
